LOCUS Silicibacter 4198931 bp dna linear UNK DEFINITION ACCESSION Silicibacter SOURCE unknown ORGANISM . FEATURES Location/Qualifiers source 1..4198931 /organism="unknown" CDS complement(20494..20718) /locus_tag="Silicibacter_67" /translation="MLHKHGLEKGITISYQSISHEVQKNIKRDNIKLSVAEGLQRSLN EAGVPVYTELIHEAYRYRRPRGGARYQLSS" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(56206..58650) /locus_tag="Silicibacter_68" /function="COG: Superfamily I DNA and RNA helicases" /translation="MSTFDEMDAFEGASLSARAMAARPMPYLDGLNPAQRDAVETLDG PVLMLAGAGTGKTKALTTRIVHLLNTNKARTNEILAVTFTNKAAREMKDRVGRMLGQP AEGMPWLGTFHSICVKLLRRHAELVGLKSNFTILDTDDQIRLLKQLIQAAGIDDKRWP ARMLANIIDDWKNRALTPAKVPAGDAAAYNHRGTEFYDQYQTRLKELNAVDFGDLLLH CVEIFQNNPDLLAQYHRWFRYILVDEYQDTNVAQYLWLRLLASGHKNICCVGDDDQSI YGWRGAEVGNILRFEKDFSGAKVIRLEQNYRSTKHILSAASGVIRGNEGRLGKELWTE AEGGEKVRLIGHWDGEEEARWIGEEIEAMQRGTRGMRQYGLNEMAILVRASHQMRAFE DRFLTIGLPYRVIGGPRFYERLEIRDAMAYFRVVISPEDDLAFERIVNTPKRGLGDKA QQTIQTVARANGVSLLEGARLAVEDGLIKGKGGAALRRLVENIARWGQMTRTVLADPD DPDAVVEGVQSFEAFQARTEVSHVELAEIILDESGYTSMWQADKNPDSPGRLENLKEL VKALENFDNLQGFLEHVSLVMDNDKQDAEQKVSIMTLHAAKGLEFPAVFLPGWEDGLF PSQRSMDESGLKGLEEERRLAYVGITRAEKVCTISFAGNRRVFGQWQSQLPSRFIDEL PEEHVDVLTPPGLYGGGFGAAAPSASAVAEPAVRSTIEERMSNADGYNSPGWKRMQAR TAERGYSKPRKSEAQTIDLAATSSFTVGERVFHQKFGYGAVVGIEGDKLEVDFEKAGP KKVVARFVSASDDIPF" /product="DNA helicase II, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1174 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 59221..60672 /locus_tag="Silicibacter_69" /function="COG: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases" /translation="MKPCRRFLIWRMNLSPLRARPLAICCRGFRNWTPPEPACVLHAS SRPSERSLLRSEAPDPIPIESQTAETHPAQMSLCGLPRAKGIDSASVLQMMAGMTLDQ RYPALDDLRAKARTRLPRFVWEYLDSATGREATQARNRLCLDRIGLMPAILGGPQEVD LGTTLFGTPLPRPFGIAPVGMSGLIWPDAEGHLARHAAQTNIPYGLSTVASQSPEDLA PHLGAQGWFQMYPPKDEGIRKDMLERARAAGFKVLVLTVDVPVASRRERQTRSGLTQP PRLTPRLLAQVAIRPAWALGMARQHRGEGGMPHMRTLDKYIEGAASALSSTAHIGYLL RTAPDWAYLEWLRDHWEGPLVVKGVLDACDAPRLEAAGADAIWISNHAGRQFDAAPAP IEVLEDIRAATTLPLILDSGIEGGLDILRALALGADFVMLGRAWHYALAALGAAGPAH LHDILSKDLTANMGQLGIRTLAEVRDLKRLSLD" /product="FMN-dependent alpha-hydroxy acid dehydrogenase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1172 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(60815..61249) /locus_tag="Silicibacter_70" /translation="MHRFVYVSTAKQDLTAQQIADIAGACHRNNRRAGLTGMLVAHQG RFLHILEGDEAAIRRRAEKIQHDPRHGDFKVLQAREIQMRAFLDWVFVHETPAALPLF GGVKVQPLRALLPINSPLRGRDLTVRHLVRDFLASFKQLLAA" /product="Hypothetical protein ycgF." /transl_table=11 /note=", BLUF, Sensors of blue-light using FAD" /note="Conserved hypothetical protein" CDS 61688..65128 /locus_tag="Silicibacter_71" /function="COG: Pyruvate carboxylase" /gene="pyc" /transl_table=11 /note="identified by match to putative ortholog SPO1171 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="pyruvate carboxylase" /translation="MTEFNKILIANRGEIAIRVMRAANEMGKRTVAVYAEEDKLGLHR FKADEAYRIGEGLGPVAAYLSIDEIIRVAKECGADAIHPGYGLLSENPDFVDACARNG ITFIGPKAETMRALGDKASARRVAIEAGVPVIPATEVLGDDMDAIRKEAAEVGYPLML KASWGGGGRGMRPIHSEDELEEKVLEGRREAEAAFGNGEGYLEKMITRARHVEVQILG DKHGEIYHLYERDCSVQRRNQKVVERAPAPYLTDAQRAEICDLGRKICQHVNYECAGT VEFLMDMETEKFYFIEVNPRVQVEHTVTEEVTGIDIVQAQILIAEGKTLAEATGKASQ EEISLNGHALQTRVTTEDPLNNFIPDYGRITAYRSATGMGIRLDGGTAYAGGVITRYY DSLLTKVTAKAPTPEKAIARMDRALREFRVRGVSTNIAFVENLLKHPTFLNNEYTTKF IDETPELFQFAKRRDRGTKVLTYIADISVNGHPETEGRAAPAADLKEPRAPRADTGNL PYGTRNLLEQKGAKAVADWMKAQRQLLLTDTTMRDGHQSLLATRMRSIDMIKVAPAYA QNLSQLFSVECWGGATFDVAYRFLQECPWQRLRDLREAMPNLMTQMLLRASNGVGYTN YPDNVVQFFVKEAAKGIDVFRVFDSLNWVENMRVAMDAVVESGKICEGTICYTGDILD PARAKYDVKYYVGMAKELEAAGAHVLGLKDMAGLLKPASAKLLIKALKEEVGLPIHFH THDTSGIAGATILAAADAGVDAVDAAMDAFSGGTSQPCLGSIVEALKNTDRDTGLDIG NIREISEYWEQVRAQYAAFESGLQAPASEVYLHEMPGGQFTNLKAQARSLGLEERWHE VAQTYADVNQMFGDIVKVTPSSKVVGDMALMMVSQGLTRAQVEDPKSEVSFPDSVVDM MRGNLGQPPGGFPESIVKKVLKGEAPNVERPGAHLEPVDIESTRAELSKELEGFKVDD EDLNGYLMYPKVFLDYMGRHRQYGPVRALPTKTFFYGMEPGDEITAEIDPGKTLEIRL QAIGETDEKGEVKVFFELNGQPRVIRVPNRLVKSSTTQRPKAEVGNINHIGAPMPGVV ASIGVQVGQQVHEGDLLLTIEAMKMETGLHAERDAVVKAVHVQPGGQIDAKDLLVELE " /EC_number="6.4.1.1" CDS 65200..66108 /locus_tag="Silicibacter_72" /translation="MSEETTGQLPDVLWHYTTFDTLTAILTSQCLLASDFRDTNDREE ILFGFKALRDAFGTHNTWNTTEGFADPVSAAIRENEERIIEDLESSFLHGQMICLSSA RDSLSMWRGYGQLTNGGGNGAVAIGFCAADLQTFCGPSDATLQSSTAHIQQNASGGFE GPSNVDYAFRNFPQLSNALSNEDYSADFHLKWTHYLAHWMKHRKHPAFAEEREYRIWG HAYDGNDKGNSQHVVFVGNHDRRKFHLAPAPDDILGPLTHPLAIQKIMVGPKTDFAKV ERFTRNVFQSYTHDRPDMCASKIPFK" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique to TM1040, belas" /note="Hypothetical protein" CDS complement(66109..66594) /locus_tag="Silicibacter_73" /function="COG: Acetyltransferases, including N-acetylases of ribosomal proteins" /translation="MRQPHRPVIRFVRLSEIDPQEITAHMSDPLMAEHMPLLEGVEWN AAQTEQFVAAKEACWARDGLGHWGILSDDAYIGWGGFQKEDEEWDFGLVLRHSAFGRG IQVAKAALAVAAQDTRIPFVTFLLPPSRRHLGALRRLGAERLPDVEHAGRPFMKFRLV L" /product="hypothetical protein" /transl_table=11 /note="Hypothetical protein" tRNA 66886..66957 /locus_tag="Silicibacter_30" /gene="Silicibacter_30" /description="RNA" /note="Created by Search for RNAs Autoannotator" tRNA 67152..67223 /locus_tag="Silicibacter_2" /gene="Silicibacter_2" /description="RNA" /note="Created by Search for RNAs Autoannotator" tRNA 67405..67476 /locus_tag="Silicibacter_18" /gene="Silicibacter_18" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS 67642..68994 /locus_tag="Silicibacter_74" /function="COG: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase" /translation="MASVIYPTTNFTATEQLCITHGEGIYVYDDTGKQYIEGLAGLWC TSLGYSNTEVVEAITEQLKRLPFQHTFGGKTHAPVMELAEKLKAMVPVEDAYFFFGNS GSDANDSHYKMLRYYFNAIGKPHKRKIITRERGYHGVTVAAGSLTSLPANLAHFDAPL EALSILRTDAPHYYTGRQGNETEAQFVERILQNLEDQILAEDPDTIAAMIIEPITGAS GVIVPPEGYYEGLQALLRKHGILIWADEVICGFGRTGADFGCTTMGIKPDLMTFAKQL SSAYFPISASVIPGWMYKAMVDQTNEVGVFGHGYTYSGHPAACAAALKTLEIYERDKI FDHAAEVGTYLQEQLRATFTDHPLVGEVRGKGLIAALELVSNKTTGATIAGGKGGAAA VKACQTEGVILRAVAGNALAFCPPLIITKPEVDEMLKRTKAGVDAAYEALRSEGLLNS " /product="aminotransferase, class III family" /transl_table=11 /note="identified by match to putative ortholog SPO1166 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 69201..70166 /locus_tag="Silicibacter_75" /function="COG: Imidazoleglycerol-phosphate dehydratase" /gene="hisB" /transl_table=11 /note="identified by match to putative ortholog SPO1163 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="imidazoleglycerol-phosphate dehydratase" /translation="MVVDVFSHILAGGDIELHQQIIFATGGVEFRVDFMQRNILGHLI GGAGFAADLDKDTGGHFSPQLLSGLVGLQPRMWRKKGQSRQIQRRTVRGRSRHHIPPT IGAAPLSLSTSQPYKPSQQIEDFAMRTAQVSRSTAETEISVSVNLDGSGTYDNQTGVG FFDHMLDQLSRHSLIDMTIRAKGDYHIDDHHTVEDTGIALGQALVQALGDKKGINRYG ECHLPMDDAQVRAALDLSARPFLVWNVDLPTQKIGSFDTELVREFFQALATHGGITLH IDQIHGVNSHHIAEAAFKAVARALRTAVEVDPRKADAVPSTKGAL" /EC_number="4.2.1.19" CDS 70273..70911 /locus_tag="Silicibacter_76" /function="COG: Glutamine amidotransferase" /gene="hisH" /transl_table=11 /note="identified by match to putative ortholog SPO1162 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="imidazole glycerol phosphate synthase, glutamine amidotransferase subunit" /translation="MLTAIIDYESGNLHSAEKAFQRMATEVGAGDVVVTSDADVVARA DRLVLPGDGAFPACAAELRGHKGIYDAMVEAVEVKGRPFLGICVGMQLMATTGHEYED TPGLGWVDGDVVKITPAEAHLKVPHMGWNDLVINHPHPVFDGISTGDHCYFVHSYHFR VANPNERLAHVDYAGDVTAVIGRDTMLGMQFHPEKSQHVGLKMIGNFLTWKP" /EC_number="2.4.2.-" CDS complement(71165..71896) /locus_tag="Silicibacter_77" /function="COG: AraC-type DNA-binding domain-containing proteins" /translation="MDRLTTLIDRFRMRVVLAARGAGNLCVMQPEAGRQILVFTPEGW VEDTGAEGVGLALRVDWDGAHNPLVAALPQRVEVDLAEAPALASVLALLRQEREAHRC GAQSVVSSLGQVLMVRLLRHLIEAGTAAPGLLAGLADPRLARAIVAMHDAPGRSWTTS DLAQEAGLSLSRFSELFSAQMNETPMGYLRRWRLTLARQDLIRGDRVEAVARRYAYDS PEGFARAFRKFYGVAPVSLRQSTAA" /product="transcriptional regulator, AraC family" /transl_table=11 /note="identified by match to putative ortholog SPO1161 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 72076..72612 /locus_tag="Silicibacter_78" /function="COG: Peroxiredoxin" /translation="MLIPRQKTPDLTLPLLGGGQFDLASEASERGTVICFYRGLHCPI CANYLKEFEKRVADFAERGVKTIAISSDGEERTRQMAEKIEAENLRFAYDLPLSVAKD WGLYISTSRGKTSIGIEEPALFAEPGLFMVTPEQTLYYGSVQTMPFVRPHFSELVAAL DFAIANSYPARGEYTGAV" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1160 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 72730..72981 /locus_tag="Silicibacter_79" /translation="MYLRFEKFSHRDGQHRYLVLSLTPTLFGDWCVIQSTGPIGQPGG QERRNYCPTLGEAETLFESTRERQVKRGFVPIPVQMGLF" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(73032..73421) /locus_tag="Silicibacter_80" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MKQILASIALIVGMSTAAFAADPIEGTWKTQPDDGSYAHIAMKP CGAALCGTIARTFNDGGEYSSPNLGKTLVMDMVPQGGGAYEGKVWRPSNDKIYIGKMD LNGNSLRLRGCVAGGLICSKQTWTRVK" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1159 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 73733..74455 /locus_tag="Silicibacter_81" /function="COG: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase" /gene="hisA" /transl_table=11 /note="identified by match to putative ortholog SPO1158 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase" /translation="MILYPAIDLKDGQAVRLLHGDMDKTTVFNDNPAAQALEFVAAGC EWLHLVDLNGAFAGEPVNAAPVEEILRQCKVPAQLGGGIRDMATIERWLDKGLARVIL GTVAVENPDLVREAARAFPGKVAVGIDARNGKVATKGWAEETDVEVTDLAKSFEDAGV AAIIYTDIMRDGAMKGPNIDATAALANAVSIPVIASGGVSSLEDLHALKSCGAALNGA ISGRALYDGAIDLAEALAVLKG" /EC_number="5.3.1.16" CDS 74595..75269 /locus_tag="Silicibacter_82" /function="COG: SAM-dependent methyltransferases" /translation="MPDGGSTARAAHRYCGPEPQHRRLPMSDKQTMAVYAKAAEDYAK GFARTKDTVHDRDYATFVAGLPDGGTVLDLGCGPGHWAARFRDEGLHVTAMDASPEMA RYAKDTYGIDVTVATFEDIDTTAHYDGIWAFFSLLHAPRTDFPGHLLRLHRALKPGGM LALGMKLGTGERRDTLGRFYTYYSEDALRALLAEAGFEVLGARCANSKGLAGARETFV VLTAHA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3211 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 75262..75735 /locus_tag="Silicibacter_83" /function="COG: Ribonuclease HI" /gene="rnhA" /translation="MPDLFAYTDGACSGNPGPGGWGALLRAMDGETVLKERELKGGEK ETTNNRMELLAAIHALESLARPSKITVVTDSAYVKNGVTGWIFGWKKNGWKTSAKKPV KNVELWQRLDAAQSRHDVTWEWVKGHAGHPENERADELARAGMAPFKSSGKSSKG" /product="ribonuclease HI" /transl_table=11 /note="identified by match to putative ortholog SPO3212 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 75849..76472 /locus_tag="Silicibacter_84" /function="COG: Predicted membrane protein" /translation="MTILTLLDYASVIVFAASGAMVASRAQLDIVGFAFIACLTAVGG GTVRDLLLDRHPIFWVGDPMPILLASGVAVLVFFTAHLVESRLRWVIWLDTFALAIAV PAGTGAALELGYGPVIIVLMGMATGSLGGLMRDVVCNEVPLVLKQGELYISCAMAGAS TAAILVWLGLPSGTALLACAGTTWVTRAGSLAFGWHLPVYKPRPPRQ" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3213 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(76526..76762) /locus_tag="Silicibacter_85" /translation="MSVVFLIIVGAAAGFIATRLMRIEADLITTIVIGIAGALIGGLV LRTLLAVMGLFAGLVGAILGAVALIFLWQKLQNR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique to TM1040, belas" /note="Hypothetical protein" CDS complement(76844..77080) /locus_tag="Silicibacter_86" /translation="MMLALFGTVVIAGIIGYAAERSGFTQNGVIQSIIICVGGAFLFF FLRLMFGIGFNAPGWNAVVSSIGALIIVPFHWRR" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3215 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(77077..78090) /locus_tag="Silicibacter_87" /function="COG: Methionyl-tRNA formyltransferase" /gene="fmt" /transl_table=11 /note="identified by match to putative ortholog SPO3216 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="methionyl-tRNA formyltransferase" /translation="MARKRVRSGRGVHPALSLRRNGLRHKDSDMRVIFMGTPEFSVPV LDALVEAGHEIAAVYCQPPRPAGRGKKDRPTPVHARAEALGLEVRHPVSLKGSEEQQA FAALNADVAVVVAYGLILPQAVLDAPRAGCLNIHASLLPRWRGAAPIHRAIMAGDTHT GICIMQMEAGLDTGPVLLRKETEIGGEETTAALHDRLSLMGARMIVDALATLPDLKAE PQPEAGVTYASKIDKAEAQIDWSVAAEEVDRKIRGLSPFPGAWFEVDGQRLKVLASRL AEGTGAVGTVLDDKLTVACGSGAVELLRLQRAGKAAQDREVFLRGFTLAKGTNLLTAQ DAE" /EC_number="2.1.2.9" CDS complement(78160..78657) /locus_tag="Silicibacter_88" /function="COG: N-formylmethionyl-tRNA deformylase" /gene="def-1" /transl_table=11 /note="identified by match to putative ortholog SPO3217 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="peptide deformylase" /translation="MTTRTCLPWPDKRLRTKAAEVTEITDEIRAIWVDMIDTMEAMPG VGLAAPQIGVMLRLAVVDGSSERGRAVRLANPEILHASIELREHEEASPNLPGVSAKI KRPRAVTVRFLNEDGVIDRRDFVGIEATSVQHQIDHLNGKMYFDHLSKVKRDMLVKKA RKLAR" /EC_number="3.5.1.88" CDS complement(78654..79163) /locus_tag="Silicibacter_89" /function="COG: N-formylmethionyl-tRNA deformylase" /gene="def-2" /transl_table=11 /note="identified by match to putative ortholog SPO3218 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="peptide deformylase" /translation="MSLLPIVQWPDPRLSTACAPVGAAEDLGTLIDDVLETMYAAPGR GLAAPQVGVLKRVFVMDVDWKEGPRNPVVMIYPEVLWRSDDTTLAKEACLSIPGLSTR ITRPTKIRIRWQDADRAAQEQTFDGFAARCIQHEYDHLDGRVTFDHFSSEERRLLEAQ YLSQNEATA" /EC_number="3.5.1.88" CDS complement(79160..79684) /locus_tag="Silicibacter_90" /function="COG: N-formylmethionyl-tRNA deformylase" /gene="def-3" /transl_table=11 /note="identified by match to putative ortholog SPO3219 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="peptide deformylase" /translation="MKRSILIHPDPRLKKIATDVPDLSDDLRALADDMLETMYAAPGI GLAAPQIGVLDRLIVMDCVKEGEGDARPLVMFNPRVIASSDETNVYEEGCLSIPEQYA EVTRPKVVDVEWMDRDGNLQTETFDGLWATCVQHEIDHLDGKLFIDYLKPLKRQMITR KMQKLKRERARGTA" /EC_number="3.5.1.88" CDS 79843..81015 /locus_tag="Silicibacter_91" /function="COG: Aspartate/tyrosine/aromatic aminotransferase" /translation="MDFDKIIDRRGTHCAKWDMMEPLYGVTPEDGLAMWVADTDFPVP EAVSAKMREMADHGIYGYVNCEAQYKSAIQWWMESRHGWSVDADAIFTTTGLVNGVGM CLDTFTQPGDGIVLFTPVYHAFAKVIRLAGREVVECPMVQEDGAYKMDFDAYDAQMTG KEKMVILCSPHNPGGRVWTQDELTQVAAFCKRHDLMLISDEIHHDLVFGGRKHLPMAV AAPEISERLIMLTAPSKTFNFAGLHTGQVIIPDETLREQFRRRMMAIYLQGNTAGEFA TIAAYSPDGAAYVEELVPYIEANKRLFDEAVNAIPGLQSMELQSTYLAWVDFSGTGME REEFTRRVEQGARIAANHGTTFGTGGESFLRFNLGTQRARVEEACERLAKAFSDLQ" /product="aminotransferase, classes I and II" /transl_table=11 /note="identified by match to putative ortholog SPO3220 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(81128..81496) /locus_tag="Silicibacter_92" /translation="MTTYVPKSVQEALDKARIQGMKKKNRLRVHVGEEIYPVLRLWDR GFAVEEGAIPQLRGLVDLYEGTRHLSQCLIVAADAEAGEMRYEFKRATAAADSAPLDF YRAPDAPMGLLGHEQHIGDN" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3221 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 81737..82711 /locus_tag="Silicibacter_93" /function="COG: Predicted glutathione S-transferase" /translation="MGLLVDGKWEDVWYDTKSHGGAFKRSEAQFRNWLTADGSPGPDG QTGFKAENGRYHLYVSYACPWAHRTLIFRKLKGLEDHISVSVVHPDMLDKGWEFKTDA DGATGDALFGFDYMHQIYTKADPSYSGRVTVPVLWDKQENTIVSNESAEIIRMFNSAF DEITGNTLDFWPEELREPIETVNKRIYDTVNNGVYKSGFATSQEAYDAAVVPLFDSLD WLEDILSQHRYLMGEHLTEADWRLFTTLVRFDPVYHLHFKCNRRRIIDYPNLWAYTRE LYQMPGVAETVVMPHIVRHYHYSHDTINPNRILPINPVLDWEAPHGRG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3222 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 82805..83800 /locus_tag="Silicibacter_94" /function="COG: Aspartate/tyrosine/aromatic aminotransferase" /gene="cobC" /translation="MAERSSFAATQDPAQASVSGSPRDHGGNLAAAIAQYGGSREDWI DLSTGINPAPYPLPPLLAEDWTALPDQDAQQALTDAARRFWQVPDSAEILAAPGASAL IARLPVLRPARSVQITTPTYNEHAAAFDNCGWQVLEVGPTDAQVVVHPNNPDGRLWLP EELKAPFCIIDESFCDICPERSLINRAAQPGTVVLKSFGKFWGLAGLRLGFAIGDPEL IAGLRAAMGPWAVSGPALRVGTHALNDQNWAEASRLELADGASRLDQLMQHAGAQTVG GTDLFRLYDVEDARAWQERLARAHIWSRIFPYSTRFLRLGLPPADRWSQLETALT" /product="cobalamin biosynthetic protein CobC" /transl_table=11 /note="identified by match to putative ortholog SPO3224 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 83797..84708 /locus_tag="Silicibacter_95" /function="COG: Cobalamin biosynthesis protein CobD/CbiB" /gene="cobD" /translation="MSTAALLIPAMILDAAFGEPKWLWSRLPHPAVLMGKLVQALDDR LNEGDGRQVKGVIAVAVLVFVGLLLGWILSWFGSLVSVLIAAILIAQRSLIDHVRAVA TGLQNDLDAGRSAVAMIVSRDTATMTGPQIARSAIESGAENFSDGVIAPAFWFLVAGL PGLLIYKLINTADSMIGYRTEAYEDFGWAAARLDDVLNILPARLSALLIALVTGRAGD WGEISADARKHRSPNAGWPEAAMARALGVALAGPRSYDGEMRPFAWVNASGSKSASAH SITRCCEVLWKSWGLALVLVVALGLLF" /product="cobalamin biosynthesis protein CobD" /transl_table=11 /note="identified by match to putative ortholog SPO3225 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 84751..85947 /locus_tag="Silicibacter_96" /function="COG: Membrane-bound lytic murein transglycosylase B" /translation="MRVLPSPNAVLHRIALITLLSAPSLAAAQCGGNFQNFVRGLKDE AVSAGYAINTVNEFFNGVSQDQKVLRADRSQGVFQKPFIEFSRRLISQDRLNRGRRKG EEFDKIFERIETTYGINRGVLLAFWAFETDYGAFQGDFNTRNALVTLAHDCRRPELFR PQIFSALELYRKGDFDPERTTGAWAGEIGMVQMLPGDILEHGVDADGDGHVTLKTSAA DALMSAARMLSHLGWRANEPWLQEVEIPAGMDVSASGPAYKQSVAEWSAMGVAPRSGG FAMKEAQASLLLPQGHNGPAFLAYPNFDIYFEWNQSFTYVLTAAYFATRLEGAQVYDA GNPDQGLSGDQMKELQRRLQARGHDVGDVDGILGANTRLAVQKEQLRLGMPADAWPTP ALLNAL" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3226 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(86008..89463) /locus_tag="Silicibacter_97" /function="COG: Chromosome segregation ATPases" /translation="MRFSKLRLNGFKSFVDPTDLIIADGLTGVVGPNGCGKSNLLEAL RWVMGETRAKAMRGGGMEDVIFAGTATRPARNFAEVSLQIDNSERLAPSGFNDSDQLD IVRRITRDVGSAYKANAKDVRARDVQMLFADASTGAHSPALVRQGQISELINAKPKAR RRVLEEAAGISGLYQRRHEAELKLKNTEQNLLRVDDVIEQLATQLGQLSRQAKQAQRY REIGEKLRLAEGMLLYRRWREADEARLLAEEELRTRVTQAAKAEGSARLAAEKRAEAE EGLPPLREEEAIAAAVLQRLMVQRDALWDQDAQARQNIEHLNNRILQLGKDIERESGL NRDAGETIDRLEWEKRELAKAGEGHDDRMAEAAEIAQESTSILHNGEEHLSQVTEDVA RLAARHQSAQRLVEDCRRALERAQGEGAKSRSAQSAAQEALAASEAAYEAAVEAEEEA REAAEMAEEALAEADELRTETQAHETDARAKRSEAEGELGALRAEVTALAKLVERDTA EGGQVMDDLRVTPGYEKALGAALADDLRAPLADQDGPTGWLTLPSYQRDAPLPDGVEP LGKYVDGPDALWRRIAQIGVVDADEAARLQPLLQPGQRLVTLEGDLWRWDGFRSWAED APSAAAMRLEQMNRLEALKQDMAHATARTEGAQAAHEALVRKLEEVTRADQAARQARR VADQRVADSARALSRAEAERNLAEGKLENFGIAVARHEEDALTASLQLKEAENAQTAL EDLAEARAKVEDIKHRVEAARITMLTHRSALDELRREGEARTKRAQTVAKELSGWRLR LESAGKRIAELEERRETSQEELEDAMAVPGEIAETREELNEQISDAEARKAEATDALV AAEAVLREAVHHERESERLASEAREARARSEARSEAARETVDATAERIDEVMHLQPAE LLEQLQVAPEDMPDAETLEVEVARHKRQRDALGAVNLRAEEDAREVQSEHDALVTEKQ DLEEAVKTLRSGIASLNREGRERLLTAFEQVNSSFAMLFTHLFGGGEANLLMVESDDP LDAGLEIMCQPPGKKLSTLSLLSGGEQTLTAMALIFAVFLSNPAPICVLDEVDAPLDD ANVTRFCDLLDEMCRQTDTRFLIITHHAVTMARMDRLFGVTMQEKGVSQLVSVDLKKA EAMVA" /product="SMC protein" /transl_table=11 /note="identified by match to putative ortholog SPO3228 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(89593..90807) /locus_tag="Silicibacter_98" /function="COG: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs" /translation="MALSAQFASRIGRMKASEIRELLKLLDQPGMLSFAGGIPDPALF PAEAFAEAFQNALSPAHQAQSLQYSVSEGYLPLREWLATYMSKLGVTCGPEHILITSG SQQALDYLGKLFLSPGDTALVGWPTYLGALAAFNAYEPRYDRLRAGENQPTAHYAEAA KAAGGRVKFAYLSPDFANPTGETMTRAERLQVLATAEALDAAVIEDAAYQDLRFDGAA VPPILTLELERNGGDIESCRTIYCGTFSKTLSPGLRVGWLVAATPVVQQLVLMKQASD LHSPTINQIATCQVAEQLFDAHVDTLRSVYGRRRDAMLAALEAHMPEGVIWTKPEGGM FIWVTLPEGMSGAELLEYALSREKVAFVPGQAFYADATGRNTLRLSFSNSNEATIEEG VARLGRVIRSMV" /product="aminotransferase, classes I and II" /transl_table=11 /note="identified by match to putative ortholog SPO3230 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 90962..91729 /locus_tag="Silicibacter_99" /function="COG: Transcriptional regulators" /gene="pdhR" /translation="MPFQKVQPEKLSSAVVRQIEKLILRGILRPGERLPSERELSERL GVSRPSLREALGELQEQGLLCSRAGSGVFVADVLGSAFSPALIQLFASDDEAVFDYLS FRRDLEGMAAERAAKFGSDADLGVIQTIFDKMEAAGDPSVSEAAAELDAQFHSAILEA SHNVVLLHMMRSMFDMLRKGVFYNRRIMFGQHTTYEALLEQHRAINSALQSRDAKAAR AAVETHMDYVKQSLEEQIRAERNAEIAAQRLEHESKR" /product="pyruvate dehydrogenase complex repressor" /transl_table=11 /note="identified by match to putative ortholog SPO3231 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(91726..92547) /locus_tag="Silicibacter_100" /function="COG: ABC-type oligopeptide transport system, ATPase component" /gene="pstB" /transl_table=11 /note=", [EC:3.6.3.27] , Phosphate import ATP-binding protein pstB (EC 3.6.3.27) (Phosphate- transporting ATPase) (ABC phosphate transporter)., ABC transporter related, ABC transporter, 3a0107s01c2: phosphate ABC transporter, ATP-binding protein" /note="High confidence in function and specificity" /product="phosphate ABC transporter, ATP-binding protein" /translation="MFHSLPLLRKPSQIAEDVTPGPTVLRLQDFGLEAGGVQLLSGVT FDLRIGEALGLIGRAGAGKSLLMRAICRLLEQERQVVTRGSLQHRGQEIFGRGFDTPE MRAKVVYIPEVANPFPMSVWDNIAYGVKLNRIATRRREMADHVEAALRRCRLWDELKD VLHTQRATALPPYQQRLLCLARSLALNPDVVMLDQPTGSIDQQENESLHDIAMDLKTD HAVVFATASLADTARLADRVAYLEEGALVEIDSAEMILTAALAPQTRAFLESTSA" /EC_number="3.6.3.27" CDS complement(92787..93344) /locus_tag="Silicibacter_101" /function="COG: F0F1-type ATP synthase, subunit b" /gene="atpF" /transl_table=11 /note="identified by match to putative ortholog SPO3233 from Silicibacter pomeroyi DSS-3" /note="Specificity unclear" /product="ATP synthase F0, B subunit" /translation="MRATLAIALTLATTSPAFAAGGGWNLGNTDFVVILAFLLFIGIL LAAKVPSLIGKQLDNRADSIKSELEEARALREEAQTLLASYERKQQDVQAQAERIVAN ARDEAAAAAEQAKADLAASIARRLTAAEEQIASAEASAVKEVRDRAITIAVEVADQVI SKQMTAADANKLIDAAIQDVEAKLH" /EC_number="3.6.3.14" CDS complement(93347..93892) /locus_tag="Silicibacter_102" /function="COG: F0F1-type ATP synthase, subunit b" /translation="MATTTHDAGHGAAEAAHGSSGMPQLDFSTYGNQIFWLLVTLVVI YLILSRIALPRIAAILNERQGTITNDLAAAEDLKAKAVEAENAYNKALADARAEAQRI AAETRAEIQAEVDEAIAKADAEISAKAAESEKAIAEIRAGALESVKVVAADTASALVA ALGGKDDADAVKAAVAERTEG" /product="ATP synthase F0, B' subunit" /transl_table=11 /EC_number="3.6.3.14" /note="identified by match to putative ortholog SPO3234 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(93979..94203) /locus_tag="Silicibacter_103" /gene="atpE" /translation="MEGDLAYIGAGLAGMGTGIAALGVGNVAANFLAGALRNPSAAAS QTATLFIGIAFAEALGIFSFLVALLLMFAV" /product="ATP synthase F0, C subunit" /transl_table=11 /EC_number="3.6.3.14" /note="identified by match to putative ortholog SPO3235 from Silicibacter pomeroyi DSS-3" /note="Specificity unclear" CDS complement(94260..95063) /locus_tag="Silicibacter_104" /function="COG: F0F1-type ATP synthase, subunit a" /gene="atpB" /transl_table=11 /note="identified by match to putative ortholog SPO3236 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ATP synthase F0, A subunit" /translation="MGKLFFYVALALVLVSGLVFAPEKAELAIHPMDQFTVTPLFGGD HIAWYTPTNVTLWMFLAVAAIIGLLVFGSSNRGIVPSRAQSVAELAYGFIYKMVEDVT GKDAVKFFPYIMTLFMFIVTANFLGLIPMSFTTTSHFAVTAILAMLVFVTVTITGFVL HGAKFLGLFWVSSAPLALRPILAIIELISYFVRPVSHCIRLAGNVMAGHAVLKVFAGF AGALGAGAFLPIFAITAVYALEVLVAFIQAYVFTILTCVYLKDALHPSH" /EC_number="3.6.3.14" CDS complement(95103..95444) /locus_tag="Silicibacter_105" /gene="atpI" /translation="MIDDDQKQRMAQLEEKLAAAKKAHEEPEPRADEHYSMANQAWRM VTELVAGLVIGLGIGYGLDVLLGTTPIFMVLFILLGLAAGVNVMLRSAREIQDKQMAE AEQRADADKDA" /product="ATP synthase F0, subunit I" /transl_table=11 /EC_number="3.6.3.14" /note="identified by match to putative ortholog SPO3237 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(95654..96541) /locus_tag="Silicibacter_106" /function="COG: Permeases of the drug/metabolite transporter (DMT) superfamily" /translation="MALRYWAVIVILGIGWGMSFMFNAVLLRELAPLWVSVGRVGLGA LGCWMFLLARGRDWRISPARALALAGFGALSYAIPFSFYAIGQQHIASGVAGIVNACT PALAVVVTHFWPGGERANWRKSLGVGAGLAGIVILSLPILQSGQSSAIWAVFVTLGAP LCYAFSVNVARQFRDMEPVVLVAWALSGATAFILPVAFWVEGAPQALTAQAWGALLVI GFALTSAAFIAMYWVLPKVGPTNVTLPTLIAPASALTLGVLVLGEPLEISHLTGLSAI LFGLLLIDGRLFKSRVPAV" /product="Hypothetical transport protein yoaV." /transl_table=11 /note=", Protein of unknown function DUF6, Integral membrane protein DUF6" /note="Conserved hypothetical protein" CDS 96641..96970 /locus_tag="Silicibacter_107" /function="COG: Predicted transcriptional regulators" /translation="MNDTLDTVFAALADPTRRAILSMLLEDDMAVTDVAEPFEMSLAA ISKHLTILTRAGLIQQEKRGRVKWCKLQPDALRAASVWMQGFGQFEPVNLDAFERFLE EELRDGE" /product="transcriptional regulator, ArsR family" /transl_table=11 /note="identified by match to putative ortholog SPO3238 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(97013..97924) /locus_tag="Silicibacter_108" /function="COG: Permeases of the drug/metabolite transporter (DMT) superfamily" /translation="MELATRPRGLRDSHKGHLAMLAFSALVAGSFSLGALIANEVTPA ALNAVRFVLAGILIGAAAALGPGLKPQQFEAPWRYVLLGGVFATYFVLMFYGLQTADP VSAAAVFTLTPAMSGVFGWLLLRQITTPRMALALVIGGAGALWVIFRADMEAVLKFEI GQGEMIYFVGCVAHALYTPMVRKLNRGEPALVFTFGVLVAGAILLVALAWRDLAATDW AGLKPIVWIGLLYVSVFASACTFVLLQVATLRLPSAKVMAYTYLVPSWVILWEIALGK GWPPALIFGGIGLTIVALWLLLKDEHG" /product="integral membrane protein" /transl_table=11 /note="identified by match to putative ortholog SPO3239 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(97933..98811) /locus_tag="Silicibacter_109" /function="COG: Transcriptional regulator" /translation="MENWDEVRTAYQVARLGTVSGAADVLGVHHATVIRHIDAIEARL GVKLFQRHARGYTATEAGLDLLRVAQATDDQFSQLVGRLKGQGDEVSGELVVTSLSSM APMLAPALAEFQQLHPDLVIRYLTGDRLFRLEYGEAHVALRAGAAPEQPDNVVQPFVA QRLALYASREYVERHGMLKGQDDMVNHRFIASDNENTRAPFERWLRSTIPAENIVFRC SDAVAGHQAIRAGAGIGFVSLWEAASSPDLVMMMDPHDEWSGKIWLVTHVDLHRTNKV QSFVRFLKEHAKSWPQ" /product="transcriptional regulator, LysR family" /transl_table=11 /note="identified by match to putative ortholog SPO3240 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 98952..99533 /locus_tag="Silicibacter_110" /function="COG: Acyl carrier protein phosphodiesterase" /translation="MTQTVLHIDSSARKTGSISRDLTAQVVARLGAETVLHRDLSTPL PLLDETWIGANFTAPEERTESQKDVLALSDQLIQEIKQADTLVIGVPIYNFAIPTTLK AWIDQIARAGVTFRYTENGPEGLLTGKRAILVVASGGTEAGSDIDYASRYLRHMLGFI GITEVEVVAADQQAIDAEASVQKAKDAIAQLAA" /product="acyl carrier protein phosphodiesterase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0383 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(99719..100246) /locus_tag="Silicibacter_111" /function="COG: Uncharacterized conserved protein" /translation="MTGKKVLRRRFPISSENLLANFIPGGFPNFCPEHAKLRSVEDAK TVEGALLYWEKQALRLKNLYLRDRKKRNYLVSLEQDRDVALKALGATLGGGGLSLGSA DRLMEFLGVRPGAVTPLAMINGAPKGVRFFMDAQAQHTDSIYMHPLVNTRTLAMPRAD LMVFFERIGVTPEWI" /product="conserved hypothetical protein" /transl_table=11 /note=", YbaK/prolyl-tRNA synthetase associated region" /note="Hypothetical protein" CDS complement(101532..102917) /locus_tag="Silicibacter_112" /function="COG: Cytosine deaminase and related metal-dependent hydrolases" /gene="gda" /transl_table=11 /note=", [EC:3.5.4.3] , Guanine deaminase (EC 3.5.4.3) (Guanase) (Guanine aminase) (Guanine aminohydrolase) (GAH)., Metallo-dependent hydrolase, composite, Amidohydrolase family" /note="High confidence in function and specificity" /product="guanine deaminase" /translation="MRCSQKGRDAGLRWALGLSPSLRKANLMSADAKILRGRTLTFHA EPNGPDDTAAYTCLEDGALLIRDGRIAAHGAYAEVLRAAPEAEVVDHRPHLLMPGFID LHLHFPQVQVVASWGEQLLDWLNTYTFPAEVQFADKTHADRMARAFFDLVLSHGTTTA VAFCSVHPASAEAYFAEAARRNMRMIGGKVMMDRNAPDGLRDTARQGYDETKALIERW HGKGRASYAISPRFAITSTPDQLEMAGALVAEHPDAYVQTHLSENRDEIDFTLSLYPD APDYLGIYERYGLVHDKTLLGHAIHLEPREIDLLAEVGGKPVFCPTSNLFLGSGLFDD GGLRAKGIQNGIATDIGAGTSYSMLQTLNEGYKILQLQNQKLHPLNAFHWITRGNAEV LGQLQEIGTLDVGSEADIVVLDVAATPAMALRAEAATSLSEELFILQMLGDDRAVVET YVAGEAMKPQS" /EC_number="3.5.4.3" CDS complement(102993..104252) /locus_tag="Silicibacter_113" /function="COG: Predicted membrane protein" /translation="MQELVIMWDWLGFAVRWLHVITAIAWIGSSFYFVALDLGLRKVP HLPVGAHGEEWQVHGGGFYHIQKYLVAPANMPDHLIWFKWESYATWLSGAALLMIVYW AGGELYLIDANKADLALWQGILISGASLSVGWLVYDFLCKSPLGEKPTMLMVLLFVLL VAMGYGYNQIFTGRAVMLHLGAFTATIMTANVFFIIMPNQRIVVKDLQEGRTPDAKYG KIAKLRSTHNNYLTLPVIFLMLSNHYPLAFATEYNWLIAALVFLMGVTIRHYFNTRHA GAGNPTWTWPVTILLFIAIMALSQAPLVQDTYEESEARTLTQTELAFAGSEHFEDVMN VVPGRCAMCHAREPYYDGIRRAPKNVLLETPADVAKYARQIYLQAGATHAMPPANVTY MEEDERALIRQWYADGAAELPFYLAGN" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0869 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 104362..105276 /locus_tag="Silicibacter_114" /function="COG: Transcriptional regulator" /translation="MAYLNNIRTFVRVYELGNMSAAARDMRISAAVASSRISQLEEHL KVRLFQRTTRLLHPTEQGQLFYHGAVKILEAVEEAEADISNVTQTPRGTLYVAAPLGL GQRLIAPAVPQFNAAYPLINIRLRLSDRKLDLAAEGLDAAFFLGLPEDSNLKIRKITD CPRVLCAAPAYLKARGTPTSSAELKTDAHDCLNLRYPGAPEFQWPLHGPDGLRRVAVT GPFESDHGDVLTQWALDGHGIILKPVFEISEHLASGRLVPVLPDEPPATIQMACLYMH RRHQDPKVRLFLDFMVDHILASLPSDAA" /product="transcriptional regulator, LysR family" /transl_table=11 /note="identified by match to putative ortholog SPO0870 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(105349..105705) /locus_tag="Silicibacter_115" /translation="MSGYLTTHVLDTARGCPAEGIEIALYKVSAGAREKVAQTVTNSD GRTDSPILPAERFATGSYELVFFCGDYLRATGQAGEDPLFLDEVPIRFGMSEAESHYH VPLLLSPYGYSTYRGS" /product="transthyretin family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0871 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(105727..105819) /locus_tag="Silicibacter_116" /translation="MMLVRASRAGRAHYGVKFSTKEMAQGRRGR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 105905..107320 /locus_tag="Silicibacter_117" /function="COG: Predicted xylanase/chitin deacetylase" /translation="MTRYPRDMRGYGATPPHPAWPNGAKIAVQFVLNYEEGGENCTLH GDAASEAFLSDIPGAAQWPGQRHWNMESIYEYGARAGFWRLHRLFTGAGIPLTIYGVA SALARSPEQLKAMKDADWEIASHGLKWVEHKDMAEDDERASIKEAIRLHTEVVGTRPR GWYTGRCSANTVRLVAEEGGFDYISDTYDDDLPYWLEVGARDQLIIPYTLEANDMRFA TAPGWVTGSDFGDYLTDAFDTLYSEGAAGAPKMMTIGLHCRLIGRPGKIAALKRFIDH IQSHPGVWCPRRIDIAEHWATEHPHQRRQRPSQMDRDTFVGAYGSIFEHSPWIADRAF DLELGPAHDCAAGVHNALCRIFRSASEDERLGVLTAHPDLAGKLASAGRLTAESTSEQ ASAGLNLLTDAERETFTALNTAYVEKHGFPFIIAVRDHDKASIMAAFKRRIDNDRAAE FDEACRQVERIAEFRLMDLLP" /product="polysaccharide deacetylase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0872 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 107317..107823 /locus_tag="Silicibacter_118" /function="COG: Ureidoglycolate hydrolase" /gene="allA" /transl_table=11 /note="identified by match to putative ortholog SPO0873 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="Ureidoglycolate hydrolase" /translation="MSRTLTARPLTAEAFAPYGDLLMPKPEPDKIINQGKCGRHHDLA QLDFADGRAGISLFVSEARHLPYEVELVERHPEGSQAFVPLDGVPMIVIVAPDADGSP GQPEAFLSAPGQSINLHRGTWHGVLAPFQQPGQYIVIDRIGDGANLEEHWFQEPWIVT EISAPAEG" /EC_number="3.5.3.19" CDS 107901..109340 /locus_tag="Silicibacter_119" /function="COG: Xanthine/uracil permeases" /translation="MSDTTIGTPEQLRDPDYMPPLGKAIPLGIQHVLAMFVSNVTPAI IVAGAAGFGFGSNSPDFPELLYLIQMSMLFAGIATLMQTLTLGPVGAKLPIVQGTSFA FLPIMIPLVAGKGVDALAALFGGVLIGGLFHAALGLVIGRIRFALPPLVTGLVVTMIG LALVKVGIQYAAGGVPAIGTPEYGSLLNWSAALVVIVVTLGLKFFTRGMLSVAAVLLG LIVGYIYALMVGMLSFDSIGASWSNAAAFALPQPFKYGFEFSFAAILGFCLMAFVSAV ETVGDVSGITKGGAGREATDKEIEGATFADGFGSALAGAFGAMPNTSFSQNVGLIAMT GVMSRHVVTCGAIFLIICGLIPKVGAVIRTVPIEVLGGGVIVMFGMVVAAGISILSDV DWNRRNMVIFAISLSVGLGLQLEPGALQHMPDTARILLTSGLLPAAVISIALNLILPE ELADESTEEVSGGMSGHSKGSLGTSRDAQ" /product="xanthine/uracil permease family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0874 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(109414..110244) /locus_tag="Silicibacter_120" /function="COG: Uncharacterized protein, possibly involved in glyoxylate utilization" /translation="MTKPTYYAPHGGLPPQTQLLTDRAMFTEAYAVIPKGTNSDIVTS LLPFWEKARFWVIARPLSGFAETFSHYIAEVLPGGGSTRPETEAGVEAVLFVVEGQME LTLDGATHQMREGGYAFVPPASDWSLRNTSDAPVRFHWIRKAYQAVEGLEAPDAFVTN EQEVTPTAMPGTDGKWATSRFVNPEDLRHDMHVTIVTFEPGAVIPFAETHVMEHGLYV LEGKAVYRLNQDWVEVEAGDYMWLRAFCPQACYAGGPGKFRYLLYKDVNRHMPLAPLR " /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0876 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 110442..111704 /locus_tag="Silicibacter_121" /function="COG: Putative glycerate kinase" /translation="MTQSMQDTALELFHCAIQRADPAAAVAAQLAAEPIAPLAPGGRR IVLAVGKAAVPMMRATLAALAEPPAAALVVTNPENLTDVPGAEVIAGSHPVPDQSSAD AGARVLSLVQTLTAADQLIVLISGGGSALMVAPAPGLSLADKATVNEMLLASGLEINR MNLIRQALSQLKGGGLCRAAAPAEVTALILSDVIGDDLRAIASGPTVAPLGQKADARA LLQAEGLWDALPAAVKTHLETPEDEREMPAAQNVLIGSNRFSLEAMRDHAKALGWHVP DLVDDLTGDVAEAAQRILDTAQTPAPDRPTALLFGGETTVRLSGTGRGGRNQELALRI AQAAKSLAGDWVFLSGGTDGRDGPTDAAGGLVTPDTWAEIARAGADPAALLANNDSYA ALKAADALVTIGGTGTNVADVQILLRRP" /product="MOFRL domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1564 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(111701..112135) /locus_tag="Silicibacter_122" /function="COG: Transcriptional regulators" /translation="MTHALPRTDRSLPIALLRARERVMGPVRQLLNGQDLTEQQWRVL RVVQESGPIDPTQIADQACLLLPSLTRILQKLQEKGLIDRARDETDRRRQVITLTDAG MQVIEANIDDSLALIERTREKMGAEDYEALLDLLRKLNGLDL" /product="transcriptional regulator, MarR family" /transl_table=11 /note="identified by match to putative ortholog SPO3689 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 112264..112659 /locus_tag="Silicibacter_123" /function="COG: 5-carboxymethyl-2-hydroxymuconate isomerase" /gene="hpcD" /transl_table=11 /note="identified by match to putative ortholog SPOA0320 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="5-carboxymethyl-2-hydroxymuconate delta isomerase" /translation="MPHITLDYAPRLAQFVDLPELCDTLRRAAINTGILPMAGVRVRA IAADHISIADGNPDHMYLDISVRLRGGRSLEARKAATQEIFAAARAVLAPVMASHPIA LSLEMRDIDPDLSPKCGSIRDHLSTGDPA" /EC_number="5.3.3.10" CDS 112656..114167 /locus_tag="Silicibacter_124" /function="COG: NAD-dependent aldehyde dehydrogenases" /gene="hpcC" /transl_table=11 /note="identified by match to putative ortholog SPOA0027 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase" /translation="MSDLAVNLDKLAGFLEEYRKSGITNLIGGEARPAASGQTFETTS PVDESVICSVARGGSEDIDAAAQAAKAAFPAWRDLPATERKAILHRIADGIVERAEEI ALCECWDTGQALRFMSKAALRGAENFRFFADRAPSARDGQMLPSPTLMNVTTRVPIGP VGVITPWNTPFMLSTWKIAPALAAGCTVVHKPAEFSPLTARILAEIAHDAGLPPGVWN LVNGLGEEAGKALTEHPDIKAIAFVGESKTGSMIMAQGAPTLKRVHFELGGKNPVVVF DDADLDRALDAAIFMIYSLNGERCTSSSRLLIQDSIAEAFEAKLLARVNSIKVGHPLD PQTEVGPLIHKTHFDKVTSYFDIARHDGATVAAGGSRHGDTGWFVKPTLFTGATNQMT IAREEIFGPVLTAIRFTDEDEALNIANDTQYGLTAYVWTNDVTRAMRFTNQLEAGMIW VNSENVRHLPTPFGGVKASGIGRDGGDWSFEFYMEQKHIGFATGHHKIPRLGA" /EC_number="1.2.1.60" CDS 114266..115246 /locus_tag="Silicibacter_125" /function="COG: Lactoylglutathione lyase and related lyases" /translation="MPIPAANLYPPFNITRLSHVEYGVTDLAASRTFYVDILGLQVTH EDDSRIYLRAMEERGHHCIILRQSDHAGVACLGFKLYDTPDLEKAAAFFEGKSLPVEW IERPFMGPSLRTRDPWGVPLEFYVKMDRLPPIHQQYRLYNGVKPLRIDHFNMFSANVD AAVAFYGEMGFRVTEYTEDDDSGRVWAAWMHRKGGVHDVAFTNGTGPRLHHTAFWVPT PLNIIDLLDLMSTTGYVANIERGPGRHGISNAFFLYVRDPDGHRIEIYCSDYQTCDAD LEPIKWSLTDPQRQTLWGAPAPRSWFEEGSLFDGAETRDSDLKAQPIIAP" /product="extradiol ring-cleavage dioxygenase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3688 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 115324..116736 /locus_tag="Silicibacter_126" /function="COG: Glutamate decarboxylase and related PLP-dependent proteins" /translation="MNWTDFASWGRKVADWAQDYHLTVGERPVRAQTKPGDMLTALPE TPPEQGEGMETIFADFEEKVMPGITHWQHPRFFAYFASNAAAPSVLAEFLTSAIAPQC MLWQTSPAATEMETRMMDWLRQSLGLPSEFRGVIQDSASSATLAAVLTMRERALNWQG NQQGLAGQPTLRIYCSSEVHTSVDRAIWVAGIGQANLVRVPIKGDWRGMDPAALETAI QSDKAAGLQPAGVILCVGGTGTGATDPIADCIKVAQNHGLYTHVDAAWAGSAMICPEF RAYWPGIEGADSIVFNPHKWLGAQFDCSAHFLKNADDLVRTLAISPEYLKTHGHDGII NYSEWSVPLGRRFRALKIWFLIRTYGLEGLRQRIRNHVAWSRQLHDALAQEPDFEIVT PPMWSLWTFRYAPDGATDLDALNLELVNRINDDGRIYLTQTRVDGVLVIRFQAGAFET TEADIMLAHDVITEIARGLT" /product="decarboxylase, pyridoxal-dependent" /transl_table=11 /note="identified by match to putative ortholog SPO3687 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 116736..117593 /locus_tag="Silicibacter_127" /function="COG: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)" /translation="MRFATYTAATETFYGVITDAGAIALSPEFPEWPTLREVIENKGL HTLAQAAKGRDVTHPLDQITYQIPVPRPEKIICVGVNFPNRNAEYKDGQDAPPNMSLF PRFARSFTGANHPLIRPPESPQLDYEGEIAIVIGKGGRRISEADAYDHIAAITLCNEG TIRDWVRHAKFNVTQGKNWDSSGAIGPWLVPFTAPAQLDDVRITTKVNGELRQDDRTS RMLFPIRRQIAYISTFTTLVPGDIIVTGTPTGAGARFDPPKFLKPGDVIEVEGEGIGI LRNAVEDEA" /product="fumarylacetoacetate hydrolase family protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0025 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 117590..118390 /locus_tag="Silicibacter_128" /function="COG: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)" /translation="MTPDQHAEAAAQLLRAEETRQQCGLLSLAYPGMTLEDAYAVQKA LVTQKLAQGRRKIGWKIGLTSRAMQQALNITTPDSGVLLDDMVFENASTVPEGRFIQP RVEAEIAFVMKAPLAGRDCTHDDILKATEYVAPSLEILDTRILRADPATGQARIITDT ISDNAANAGIVMGKAKHAIDAFDLRRVGAILKRDGVVEETGLGAGVLDDPVTSVLWLA RRMADYGQQIEAGDIVLSGSFIRPVECPPGTQIHADFADFGSVEISFS" /product="2-oxo-hepta-3-ene-1,7-dioic acid hydratase, putative" /transl_table=11 /note="identified by match to putative ortholog SPOA0024 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 118403..119167 /locus_tag="Silicibacter_129" /function="COG: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase" /translation="MAAPINRFKEALKDGQRQIGCWCSFGEAVTTEVMGTAGFDWLVV DGEHAPNDIRSIRDQLVALATSPAEPVVRVPIGEAWIIKQVLDAGAQTVLVPMVETAE QAAELVRACHYPPHGTRGVGAAGARATRFGTTPDYIATADAQICVLLQVENRKGIENL DHILAVEGIDGIFIGPADLSTDMGHQGNSAHPEVRAVIADAISRIKAAGKAPGILGVT DEATQAYSDMGAQFLAVGLDVLVLAQGARTLAAKWR" /product="HpcH/HpaI aldolase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3686 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(119211..121163) /locus_tag="Silicibacter_130" /function="COG: Predicted metal-dependent hydrolase with the TIM-barrel fold" /translation="MLGTHLKLGLMSLCAATVAMGAAAQDVADTIYTGGPVLTMDDSA PRAEALAVREGRIAAVGSTEAVMALRGESTRVIDLEGATLLPGFVDAHGHVAAIGLQA MAANLLPAPDGRGNSIAELQDILRDFIDAQPERVERFGAVIGFGYDDSQLSELAHPTR HDLDAVAADIPVYIVHQSGHLAVANTAALALAGITAESEEMPGGVIRREADGKTPDGV LEETPHFVALGRILGGLDAEGSIEMVRAGVDLVASYGYTTAQEGRASTGQVQMMQALA AQPDGLKVDVVAYPDILIDRDFILEEQSFDYENGLRVGGAKLTIDGSPQGFTAWRDKP YYAPPPQMRSDYVGYPAASPDQVFDAIDWAYENDVQILTHSNGEAASDLLLAATGAAA EKHGNDDRRSVLIHGQFLREDQVDRIKALDIFPSLFPMHTFYWGDWHRDRTVGPEAAD NISPTGWVLKRGMRFSTHHDAPVAFPDSMRVLDATVTRRSRSGDIIGAAHRVDPMTAL KAMTIWPAWQHFEENTKGSLEVGKLADLVVLSADPTAIDPETIDQIRVLRTIKEDEVV YDASERDEGSLLQWRPVPGRIDTGSEMLRRAALMREIPQDLSGVRRRVALRAGSGPTH GATCVSGYLFATLTPGFERAKDRLIP" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2830 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(121307..121630) /locus_tag="Silicibacter_131" /translation="MTYRDDKTDNEDLAYGQTPWGCASTRKRLDSESMMLLRANLSEP LNRADSWPTLRELLRGKGFDMKRREGRLRLVDLQSRVEICTFGLLGHPRAELEKRFGA PMQAH" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(121799..123442) /locus_tag="Silicibacter_132" /function="COG: ATPases with chaperone activity, ATP-binding subunit" /translation="MRFVLSSVLVGAAALLSTTALAETFTAASRVSAVTVYPSEALMT RTAEVTLPAGRHRIIITGMPFVDEVETLQVTHPGVRRVGLYLRESFPVLEETATPEQA TAEARVAEIEDQIDALRQTAEEARLAAQGAEAAIAFLSALNRGEGAALPDPDQLRALV STVREETSEARETILRAKAQERGFQRQMKDLEAELARAQAELRALSQQDEEQMFLALD VEADEEVTVPLSLSYPNDAVSWGPSYAFNLQTGTSPEVTLRRDVMIQQATGEDWVDVA LRVSTSTPDQRINPHDLRPNRRWIEDEQQAKQRFTSESRVMSAAEPIVEAPIIVEDTG ASFGVVASEAGVSYSFDVPVSLRSGAELAYLTLPDVTFEAEVFAQAVPRRDPTAFRIA RIVNTSGEELLASSTTRYFVDGDLVGSGHFAGLTPDAELDLGFGPIDGLRLKRDLLDQ SEGGRGVISRSNQRDMVAEIEVENLTGQDWPLRVLDLVPFSDQEDLEITWSATPAPSE ENVDKQRGILAWDLDVSAGKTRTISLKTRLSWPEGMVLR" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3713 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(123608..124630) /locus_tag="Silicibacter_133" /function="COG: Aspartate-semialdehyde dehydrogenase" /gene="asd" /transl_table=11 /note="identified by match to putative ortholog SPO3712 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="aspartate-semialdehyde dehydrogenase" /translation="MGYRVVVAGATGNVGREMLNILAERQFPVDEIAVLASRRSLGTE VTFGDKTLKTQDLDTFDFTGWDMALFAIGSDATKKYAPKAAAAGCVVIDNSSLYRYDP DIPLIVPEVNPEAVHGYSKKNIIANPNCSTAQMVVALKPLHDRAKIKRVVVSTYQSVS GSGKDAIDELWDQTKAHYNPTDDYQRKVYPKDIAFNVIPHIDVFLDDGSTKEEWKMVA ETKKIVDPSIKLTATCVRVPVFVGHSEAINIEFEDFLDEDEARDILREAPGIMVIDKR EDGGYVTPKECVGDFATFISRIRQDSTLDNGLNLWCVSDNLRKGAALNAVQIAELLGR EVLKKG" /EC_number="1.2.1.11" CDS complement(124698..124796) /locus_tag="Silicibacter_134" /translation="MKPHRVGTFVMKSEIYVEQNRRPRSFGPNRAF" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 124895..126046 /locus_tag="Silicibacter_135" /translation="MTRADPFYDSLQKVQTFENLTGGTRFTPLPEEWYVGCCDIVDST GLLARGQYKTVNMIGASAIAALMNAFDHAPFPFVFGGDGTSFAVPPHLADRARQELAK LRAWVAQEFDVALRAALLPVADLRDAGRDVRVARFAASSHLDYAMFDGGGLAWLEEEM KAGRYEIPAADPVAPPDLEGLSCRWDNVPAVNGEILSLLVLPHANTDPAAFDALVARI LSEVSQTERAGHPLPAIGPKLRFPPPGLGIEARLLRGNAPAILRKLMLFFQSAFAGLI FLRGRPAGSFDPIHYRSTIATNADFRKFDDGLKMTLDCDAKTRTTLERLLKQAQAEGV ARYGLHVQAEALVTCIVPSPLQDDHMHFVDGASGGYAQAAQMLKGAARD" /product="hypothetical protein" /transl_table=11 /note="Hypothetical protein" CDS 126914..127294 /locus_tag="Silicibacter_137" /translation="MANILTVKHRENVHLDPKKLSELYSQLGETSAEDVVCRAIEELA VRLTHCERLWRQDDIDNLRKSARSLIAISEQIGMMAMANIARDVTDAIDADDSPAVAA TLFRLIRVGESSLTAVWEQHDLTV" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3716 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(126110..126955) /locus_tag="Silicibacter_136" /function="COG: Carbonic anhydrase" /gene="cah" /transl_table=11 /note=", [EC:4.2.1.1] , Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase)., Carbonic anhydrase, prokaryotic and plant, Carbonic anhydrase" /note="High confidence in function and specificity" /product="carbonate dehydratase" /translation="MDVFPMFDCQYVSHHNSPRIRYAPTACVQFAPHWLSKGFQALRK SLEFGENCGYQPRQSTTRGELMDYAKPLPHYLVTRYHGWKATSYEENQGWYRRLAKEG QRPRAMVISCCDSRVHVTSIFGADQGEFFIHRNIANLVPPYAPDGDHHGTSATVEYAV TVLKVAHLIVLGHSQCGGVQGCIDMCKGHAPALEEKTSFVGRWMDILKPRFASVEDIA DPDEQARQFERQAVVASLENLMTFPFIDNAVKAGELSLHGLWTDIGEGGLECYDPKSN SFLQV" /EC_number="4.2.1.1" CDS 127426..128844 /locus_tag="Silicibacter_138" /function="COG: Leucyl aminopeptidase" /translation="MQPHFAVPNLAVPTFAAATDAALPLHIVTERTLDAWLAEQDGAT AGWVRSMGFRASWGQVVVLPGPDGSLRGALIGAGTPKSRQRQRFLLAAAAAKLPESTY SLASELPADLSLEVECFGWLMAQYAFDRYAKNTGAKARLVAPDGVDAARIEAMAAGET FTRTLINTPAEHMGPAELQGAVESLAEAHGAEVRSIVGADLLEQNFPLIHTVGRAAER APRLIDLRWGSEGPTLTLVGKGVCFDTGGLNLKPGASMALMKKDMGGAANVLGLAHMI MATGLKLRLRVLIPAVENAISGPAFRPGDILTSRKGLTVEINNTDAEGRLVLADALAF AQEETPDLLISMATLTGAARVAVGADIAPFFTDREGDAVTLSSTAQDAADPVWRLPFH DAYEAMIEPGIADLDNAPAGGFAGAITAALFLRRFADEARYMHFDVFGWSQSNQPARP KGGVGQGTRALYQALPELLGLS" /product="cytosol aminopeptidase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3717 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 128841..129581 /locus_tag="Silicibacter_139" /function="COG: Cell wall-associated hydrolases (invasion-associated proteins)" /translation="MTRARIDRPVVDLCAAPAGARDRQLLLGDTVEILATSDGWCHLR AEKDGYQGWVPGTALAEPLTPTHWVSAPATHAYTKADFKSPDLVSLSLGSQVVVSGSE GRFAQTDQGFVPLAHLMPLAQRASDPVAVAETLLGTPYLWGGNSRFGIDCSGLVQLSC HACAIACPGDSGPQETALGQTLPDGTPYERGDLLFWKGHVGWVRDPLTLLHANAFSMA VTLEPLQSAITRIAEQGDGPVTAHKRLT" /product="NLP/P60 family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3718 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(130012..130296) /locus_tag="Silicibacter_140" /function="COG: FOG: GGDEF domain" /translation="MLLAEKAFESMREAQEENAWSARHDKLTGLGNRKYLEEVAVETS TGPLGATLLIAIDLDRFKEINDTYRHEAGDVVLEHTAQRLSEKIKTGP" /product="Hypothetical protein ydaM." /transl_table=11 /note="GGDEF, belas" /note="Conserved hypothetical protein" CDS complement(130381..130911) /locus_tag="Silicibacter_141" /function="COG: Prolyl-tRNA synthetase" /translation="MDATHAASEEGLPISCEDLLSQLNSWGISYVLHEHAPLRTVEDA KAVEGALLRPGEQALRLKNLYLRDRKKRNYLVSLEQDRDVDLKALGATLGGGGLSFGS ADRLMEFLGVRPGAVTPLAMINGAPKGVRFFMDAQAQHADSIYMHPLVNTRTLAMPRA DLMVFFERIGVTPEWI" /product="YbaK/prolyl-tRNA synthetase domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3242 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(130999..131784) /locus_tag="Silicibacter_142" /translation="MPACYLLVPYCFICPCRVEREGACLEARVVVVKVLILGVAQDAM RAVDWDGGLFDYILAIEEAWHLRPDWTHMLHSDSLAPDDRPVLLEAGQQVVTEADYEP VLTHFGGAAYTGSDLVLAASYWALAALEPAQVFCMGCEFDSPGAPIEGDARAGASRSN GARDLTAKARRLEYFASLCGCAIANLSSESSVLPFQRATFDGLDQVRPAYPSEEASMV ARQLEQQYGDPASPNAQYPCAQGMAEIDAAWRRCFTLRDAAVA" /transl_table=11 /note="unique gene of TM1040" /note="Hypothetical protein" CDS 132101..133687 /locus_tag="Silicibacter_143" /function="COG: Signal recognition particle GTPase" /gene="ffh" /translation="MRGTRHKPAKEAEGMFENLSERLSGVFDRLTKQGALSEDDVKTA LREVRVALLEADVSLPVARDFVKKVQEQATGQAVTKSVTPGQQVVKIVHDALVETLRG DEDPGALKIDNPPAPILMVGLQGSGKTTTTGKLAKRLKEKEGKKVLLASLDVYRPAAM DQLAVLGTQIGVDTLPIVKGQSPVDIAKRAKQQAALGGYDVYMLDTAGRLQIDETLMK EVEDVRDVVSPRETLLVVDGLTGQVAVEVAEEFDNKIGISGVVLTRMDGDGRGGAALS MRAVTGKPIRFVGLGEKMDAIETFEPDRIAGRILGMGDIVALVEKAQETIEAEQAERM MKRMMKGQFNMNDLRMQLEQMQQMGGMQGMMQMMPGMGKMAKQVEESGFDDKMVKRQI AMIQSMTKKERANPALLQASRKKRIAAGSGMEVSDLNKLLKMHRQMADVMKKMGKMGK GKMLKQAMKGMFGKGGMPEMPGGMPGGMDPSQMDPKALEAAAKAMGGKGGLPGGLGGL GGLGGGMGLPGGLSGFGKKK" /product="Signal recognition particle 54 kDa protein 2" /transl_table=11 /note=", Signal recognition particle 54 kDa protein 2 (SRP54)., Signal recognition particle protein, SRP54-type protein, GTPase domain, ffh: signal recognition particle protein" /note="High confidence in function and specificity" CDS 133697..134227 /locus_tag="Silicibacter_144" /function="COG: Acetyltransferases, including N-acetylases of ribosomal proteins" /gene="rimL" /transl_table=11 /note=", Probable GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (Glutamine amidotransferase) (GMP synthetase)., GCN5-related N-acetyltransferase" /note="High confidence in function and specificity" /product="Probable GMP synthase" /translation="MSSAPTIETDRLILRPHVAADLEAFWSFYQSDRSRYMDVPTSRS QLWAGMLAEVGSWEIFGWGGLAIETKDGQLAGQVCISQPPHFPELELGWIVFDGFEGF GYAFEAASAMRDYAFEILEVPTLVSYIDGNNQRSVALAKRMGAVEDLNARTYDAADQV YRHSPDSSGPGLEAYA" /EC_number="6.3.5.2" CDS 134224..134829 /locus_tag="Silicibacter_145" /function="COG: Acetyltransferases, including N-acetylases of ribosomal proteins" /translation="MSTPSIPVIETKRLILRGPEAEDYPNFKATFTSYRARFMGGPLN TYEAWMLYAAEIGHWQVRGFGMWMIHDKITDETYGMAGGWQPAGWPEREIAWIIWPEK AGKGYALEATHAARNYFYTQAGWDGAVSYIDPKNLDSIRLAERLGAKKDHEAQTIDGN DAVYRHPTPAQLRDSQLTHGIEMEIGHYADPLFKPKGWAID" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3251 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 134759..135130 /locus_tag="Silicibacter_146" /translation="MASRWKSAITPTRCSNRKDGPLTETTTDPVARAAALLKEHRESI DRLDAIIVYTLGERFKRTQAVGKLKATHDLPPSDPAREAKQIERLEDLAREADLDPEF AKAFLNFIIDEVIRHHKKHQE" /product="chorismate mutase" /transl_table=11 /EC_number="5.4.99.5" /note="identified by match to putative ortholog SPO3252 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 135190..135555 /locus_tag="Silicibacter_147" /function="COG: Ribosomal protein S16" /gene="rpsP" /translation="MAMKIRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLL PKDSEERVKMDIEKIQAWLDKGAQPTDRVARMLEAAGVREKTERNNPNKAKPGKKAQE RAEEKAAKAAEAAEAADAE" /product="ribosomal protein S16" /transl_table=11 /note="identified by match to putative ortholog SPO3253 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 135560..136213 /locus_tag="Silicibacter_148" /function="COG: Nitroreductase" /gene="bluB" /translation="MTGPVQEAKGCFPQAFRAELDLLMKLRRDVRRFRTDPVDEAVLT RCLSAISLAPSVGLSEPWRIIRVESETARAAALQNFETANAEALADYSEDRAATYARL KLSGMREAPVQIAFFCDDETGKGHGLGARSMPEMRRYSVVTAVTLFWLALRAEGLGLG WVSVLDPARMARDLDVPQSWSLIGYFCIGHPERLSDTPELEQEGWEQRFAALPIETR" /product="cobalamin biosynthesis protein BluB" /transl_table=11 /note="identified by match to putative ortholog SPO3254 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 136252..136401 /locus_tag="Silicibacter_149" /translation="MGLIRMVIFTLVAFGAGVLYERSGARERCAAAGGDWTRTETGTG MICRM" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 136403..136918 /locus_tag="Silicibacter_150" /function="COG: RimM protein, required for 16S rRNA processing" /gene="rimM" /translation="MSDVSEDLICVGALAGSFGVRGEVRLKSFCANAEEIEDYSPLLG ADGQTRYTLAITRAIKGGFAARIVDVETKEQADALKGVQLYAPRDRLPSLPDDEFYHA DLIGLEVYDTGGTLLGRVKAVQNYGADDLLELHGPGLSATVLLPFTKAAVPTVDLSQG RIIADPPAGVF" /product="16S rRNA processing protein RimM" /transl_table=11 /note="identified by match to putative ortholog SPO3255 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(136919..137929) /locus_tag="Silicibacter_151" /translation="MEQRPGGHMSDTSNQSGPDLDRERVAQALGIATDRARWRLIKST AAREVFLLEGTDCDPLVVKYDDDVSQVRFGELLSCYRSLERVMGRDGAFRMVPLVWAD AENRVLALKYVPGLTAYARLEAAEIDFDSRADVLRHCGAWLRQLHQSASDTPQPFDGE GMLKRVRRVAKTIRSGSQEVAYPKKFLGICAFMHHVTRGAQGRPCRHGTRHGDFHSRN VVFGRDGPLYALDPAPRDTGPVAFDVARFMTRLGYSFGLARTQTRGLAGLPAADWVAL SAGYGHPCQDDPVVHFLLCHQLFNDWLQMPVEKEHRSASQQRRIERIVSMFEVLRQQL QT" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 137992..138792 /locus_tag="Silicibacter_152" /function="COG: tRNA-(guanine-N1)-methyltransferase" /gene="trmD" /transl_table=11 /note="identified by match to putative ortholog SPO3259 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="tRNA (guanine-N1)-methyltransferase" /translation="MSKPTKSHGRLSIGASLKPRELMSDTPDLAGVWKAKILTLFPEA FPGVLGESLTGKALQQGLWQLETVDLRPFGIGKHKNVDDTPAGGGAGMVLRADVLGDA IEHAMQGTAGNWPLIYLSPRGRRMDQQMMQTFARCDGLTLLCGRFEGVDERVLEHYGI QEVSLGDFVMTGGELAAQALIDATVRLIPGVLGNQASTEEESFSSGLLEHPQYTRPAD WKGRAIPDVLMSGHHGKIAEWRQDMSEKITQERRPDLWAAYQARKSKT" /EC_number="2.1.1.31" CDS complement(138793..139185) /locus_tag="Silicibacter_153" /translation="MILRHCFVLGFSALVVAGCDYAGPTSDAAVQKRAQNDALWAERV TVRDGAKPYAFSADRARGVALIAPAAAGFAYTVADLERITAAQTECKAVFQDGILDLL KGYSETTNLRSTQEQLDSFNRWQLKLDC" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 139342..139674 /locus_tag="Silicibacter_154" /gene="yegP" /translation="MAAKFELYTDNAGEFRFRLKAGNGENILASEGYKQKASAENGIE SVKKNAADEARFERKETAAGKHMFNLKASNGQVIGTSQSYASASGRDGGIESVMRNAP EARIEDLT" /product="Hypothetical 12.7 kDa protein in ptx operon 5'region" /transl_table=11 /note=", Hypothetical 12.7 kDa protein in ptx operon 5'region (ORF117)., Protein of unknown function DUF1508, Domain of unknown function (DUF1508)" /note="High confidence in function and specificity" CDS complement(139751..140176) /locus_tag="Silicibacter_155" /function="COG: Predicted transcriptional regulators" /translation="MKLLDIGEVAKQSGTKPSTLRYYEDKGLIQSLSRNGLRRQYGPM VLEQLALIALGKQGGFSLDEIGAMFGPEGQPEIARTELDARADEIQRQAQRLEALSDM MRHVATCPASNHMECDKFQRLLRLATRIQRRGGTPKGKS" /product="HTH-type transcriptional regulator hmrR" /transl_table=11 /note=", HTH-type transcriptional regulator hmrR (Copper efflux regulator) (Copper export regulator)., Putative DNA binding" /note="High confidence in function and specificity" CDS 140244..141458 /locus_tag="Silicibacter_156" /function="COG: Sugar phosphate permease" /translation="MTAAPSTLPALDRRAVALLLAATLTTMANAAISPALPGLEARFA DHPQAALLTRFLVPAPSVAVVLIAGWAGVLADRLGRRPMLIGGVLLFALAGSLGMVLG SLEAILLSRLALGVAVALIMTAQTALIADYFDGAARSRVLGLQISARNLGGLVSITLA GVLALMSPMHAFAIHGLALLILPILWCAISEPKRPSPATTARGAPPATTQRLGLGLWA IAGLQMLTTICFFTMPTQVPFFVASHGIKNTAIIGSVMGALTLAGMLAATRYSTLKPR LGHARLFLLGYGLMGLGMAVLALAPGLAMIFLGAALVGLGFATVSPNFNEIALRAAPA DLRGRAAGIMTTSVFLGQIVSPFLTLPMVRHAGYSGTFATLAVLLGLAALVALLAYGV TRGATDAAERAS" /product="major facilitator family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3735 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 141722..142093 /locus_tag="Silicibacter_157" /function="COG: Ribosomal protein L19" /gene="rplS" /translation="MDLIAQLEAEQIAALGKEIPDFKAGDTIRVGYKVTEGTRTRVQA YEGVCISRKNGSGIAGSFTVRKISFGEGVERVFPLYSTNIESIEVVRRGRVRRAKLYY LRSRRGKSARIAEDANYKAKA" /product="ribosomal protein L19" /transl_table=11 /note="identified by match to putative ortholog SPO3257 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 142105..142326 /locus_tag="Silicibacter_158" /function="COG: Ribosomal protein L31" /gene="rpmE" /translation="MKKDIHPDYHFIDVKMTDGTVVKMRSTWGNEGDQLALDIDPSAH PAWTGGSSRLMDTGGRVSKFKKKYEGLGF" /product="ribosomal protein L31" /transl_table=11 /note="identified by match to putative ortholog SPO3256 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 142611..143420 /locus_tag="Silicibacter_159" /function="COG: ATPases involved in chromosome partitioning" /translation="MAHIIVVGNEKGGAGKSTVSMHVATTLARLGYKVAGLDLDLRQR SLGRYLENRLAFIAASDLNLPMVSLHELPEIDPDTLQPGENIYDLRLSAAISELEPIY DFILIDCPGSHTRLSQVAHSLADTLITPLNDSFVDFDLLAHTDEKGEKIKGPSVYSEM VWNARQLRAQAGLPPIDWIVIRNRVGTQRMVNKEKMERAINMLSKRIGFRVAPGFSER VIFRELFPRGLTLLDLKDVGVKQLNISNIAARQELRDMMKALELPEVEIDI" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0689 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(143611..144924) /locus_tag="Silicibacter_160" /function="COG: Adenylate cyclase, family 3 (some proteins contain HAMP domain)" /translation="MLRSCAECCGNWPAWSRRLTARLDQQQGDGAIHAATEDLKNWLT EQGLKAVGREELLRRFCEELVNHGVPLLRMQLSQRALHPEFGGIGFTWTRQDGLNSEY FERVDHKEPRNEWVQSPFFALISSGEAEYYSRFSREDEARFPIFTRLKEMGATSYFAH WQPFGDFSQAQFDPDSPNAEGLVASWSFDGPPEEAEPCLALLRNVFGTLALVLAAAGN REMGRALLQVYLGRDAGARVLSGEIARGSSQRIDAVICLFDLRGFTALSESLPGEELV DLLNDYFGHVVQLIQSHGGNILKFMGDAVMAMFNLGTLQEDAQAALRAVAELGPRMRA VNEVRAAEGLPLAEYTMALHAGEILYGNIGAPNRLDFTVIGPAVNLTARIADMHRAVE RSIILSEDVRDAAGADGADLVSVGRYMLRGVAEPIELFTLYQPET" /product="adenylate/guanylate cyclase" /transl_table=11 /note="identified by match to putative ortholog SPO0688 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(144854..145312) /locus_tag="Silicibacter_161" /function="COG: Transcriptional regulators" /translation="MSKNDDFAVQDFLPFLLNRAAEDSSLEFQKLYKGRYGMLRTEWR VLFHLGMYTRMTASDISQRARIHKTKISRAVAKLAARRWVSRSRDESDRRSEHLELTA AGRSVYEDLRQQAQVYDQRLTQGFSAEDVALLRRMLRQLASMEPPADRTP" /product="transcriptional regulator, MarR family" /transl_table=11 /note="identified by match to putative ortholog SPO0687 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 145389..146744 /locus_tag="Silicibacter_162" /gene="hmgA" /translation="MTRHALPDQMIQAPSNQGTHEGYMPGFGNDFETEALPGALPQGM NSPQKCEYGLYGEQLSGTAFTAERPERTWCYRIRPSVKHSHRYEKIDLPYWKSAPHIP EDVISLGQYRWDPVPHTEEGLTWLTGMRTMTTAGDVNTQVGMATHIYLVTESMKDEYF FSADSELLVVPQEGRLRFATELGIIDIEPKEIAILPRGLVYRVEVLEGPARGFVCENY GQKFDLPGRGPIGANCMANPRDFKAPVAAFEDREAPSTLTVKWCGQFHETKIGQSPLD VVAWHGNYAPYKYDLRTYCPVGAILFDHPDPSIFTVLTAPSGQPGTANIDFVLFRERW MVAENTFRPPWYHKNIMSELMGNIYGQYDAKPQGFVPGGVSLHNMMLPHGPDREAFEG ASNSNLGPEKLDNTMSFMFETRFPQHLTEFAAKEAPLQDTYIDCWSDLEKKFDGTPGK K" /product="homogentisate 1,2-dioxygenase" /transl_table=11 /EC_number="1.13.11.5" /note="identified by match to putative ortholog SPO0686 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 146862..148118 /locus_tag="Silicibacter_163" /function="COG: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)" /gene="hmgB" /transl_table=11 /note="identified by match to putative ortholog SPO0685 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="fumarylacetoacetase" /translation="MPLKKSWVTSANSADHPFPLNNLPYGVFSTPDSDPRCGVAIGDM ILDLAAAEAAGLIDLADEPMFEMPFWNEFMEEGPAVWAALRTRLIALLEEGSDAQNKV EPCLVPMSGAEMHMPIMVSEYTDFYAGRHHATNVGTMFRGAENALPPNWLHIPIGYNG RASSVVVSGTDVRRPWGQLKGPNDDAPRWAPCARFDIELEMGAIVGTPSDGPITVQDA DDHIFGYVLLNDWSARDIQAWEYQPLGPFQAKATATTISPWIVTKAALEPFRCDTPAR EVELLDHLKDCGPMLYDIDLAVTLRPEGGEEATIARTNYKEMYYSAAQQLAHHTTSGC PMNAGDLLGSGTISGPNKDERGSLLELSWGGKEPLTLPSGDTRSFIEDGDTLTLKGAA KGEGYTIGFGDCTGTVLPALSDPFAR" /EC_number="3.7.1.2" CDS 148201..149151 /locus_tag="Silicibacter_164" /function="COG: Zn-dependent hydrolases, including glyoxylases" /translation="MAKAFASQGDMSEKKISFTEVGEGLYAFTAEGDPNSGVIIGDDS VMIVEAQATPRLANKVIECVRSVTDKPISHVVLTHYHAVRVLGASAFGAQNIIMSDTA RAMVVERGQEDWDSEFQRFPRLFEGHESIPGLTWPTTTFSDSMTVYLGNRRVDIKHLG RAHTAGDAVIHVPDQNVMFTGDIVEYHSACYCGDGHFGDWGKTLDNIKAYDVDAIAPG RGDALVGKDMVNAAIENTRDFVESTYRPAAKVAARGGSLKEAWDAVRDACDPKFKDYA IYEHCLPFNVARAYDEARGIDTPRIWTAQRDLEMWEALQS" /product="metallo-beta-lactamase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0683 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 149274..150881 /locus_tag="Silicibacter_165" /function="COG: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases" /translation="MNKIFEVPLYPYARHADQDAQPPARHKVVVVGAGPVGLAAAIDL AQSGVPVVVLDDNDKVSFGSRAICFAKRTLEIADRLGVGHAMADKGEEWNVGKVFFGD RKVYDFNLLPEDGHQFPAFVNLQQYYIEEYLVDRVRALRDEGAPIEIRGKNRVTHVED LGGHVALTVDTPDGAYQLETGWLIACDGAGSPLRAQMGLDFVGRVFEDNFLIADVVME ADFPTERWFWFDPPFNKGQSALLHKQPDGVWRIDLQLGWDIDKEEEKRPENVIPRLKA MLGEDVQFELEWVSIYTFQCRRMEKFRHGRVIFAGDSAHQVSPFGARGANSGLQDTDN LIWKLKLVLDGVADESLLESYNAERIAAADENILNSSRSTDFITPKSDMSRIFRDAVL DLSEHHSFARPLVNSGRLSLPSVYDGSRLNSADRLPGAPTRTRPGAPCPDVPLEGGYL LPQLASGFTLLAINAEVPDGFEEAGVFVPALRLNGEASAPLAERYLGEASSAVYLIRP DQHVATRMDHFDPAHFHAALRRAIGKE" /product="monooxygenase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0682 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 150887..151093 /locus_tag="Silicibacter_166" /translation="MSDDLTLTPNLAQPDDAYALLLSAHEGLSKAQSDALNARLILLL ANHIGDAEVLKQALTQAKQGLTDG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0681 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 151086..151733 /locus_tag="Silicibacter_167" /function="COG: Glutathione S-transferase" /gene="hmgC" /transl_table=11 /note="identified by match to putative ortholog SPO0679 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="maleylacetoacetate isomerase" /translation="MADVVLYDYWRSSASYRLRIALNLAGIAYESRSVDLVAGAQRSP EHLARNPQGFVPVLEIDGERFTQSLACLTYLDSTRGLGLLPQEPVARAHVEALAQSIA VDLHPVCNLSVARFGVTSSGGSLQMGDWMRQFIGPGLEAFDRLLARWPEPGEGSFCTG ARPGLADICLMPQLYNARRWEVDLNPFPRLQRIEASCAAHPAFAAAHPDHHQPAQ" /EC_number="5.2.1.2" CDS 151870..153084 /locus_tag="Silicibacter_168" /function="COG: Uncharacterized conserved protein" /gene="yvcK" /translation="MSKTAPSPPAPASAPGSDPGSDPGPAHVRPPGRDATQGPRLLFF SGGTALNEISRRLKAYTQNSVHLITPFDSGGSSQVLRKAFGMPAVGDLRSRLMALADE TDRGQPEILRLFTHRFAKHASERNVTQDAARLFEGTHPLLQGIPTPVRQQIREDLRQF QDAAPADLDYRNASIGNLILAGGYLRHGRQLEPVLAQMSRMVAVRGTVRPIADVNLEI GAELRDGRRVIGQRRMTGKEHAPLTSPIARLFLSDGTRELPADAVPLPQSNQDLIAGA DLICYPPGSLYSSVICNLLPKGVGQAIAARNVPKVYVPSLGTDPECLAMTLSDQISAL LAPLRRDAGDVATSAFLSHVICDLSVSEAARAEVLRDHGIPCIARPLAVSSGKSPCYA PDALCRQLLALA" /product="Hypothetical UPF0052 protein sll0154." /transl_table=11 /note=", Protein of unknown function UPF0052 and CofD, Uncharacterised protein family UPF0052, CofD_related: conserved hypothetical protein" /note="Conserved hypothetical protein" CDS complement(153160..155367) /locus_tag="Silicibacter_169" /function="COG: Membrane carboxypeptidase (penicillin-binding protein)" /translation="MTQGRNSGRGTGRGRGPLVAEKRNLGGNQRKPAKKAPRKRAPQK AKRGWSLFGRRKTARPQRRRGLLGWLLLPFQIVARVIWAVSWRMGVVGGLFLAGAVAF HYTKLPEYQALLDGRHQGSVTLLDRNGKTFAWRGDQFGGVVTADTVSPHLKNAIVATE DKRFYRHFGISPRGIASAVRINLSEGRGPLSGHGGSTITQQTAKLMCLGVEYDPDIWE SEAAYESDCRQSSLWRKGKEAIFALAMEVKYTKNEILSIYMNRAYMGGGAHGVEAAAQ RYFGKSANQVNPPEAAMLAGLLTAPSTLAPTNNIERSRNRAATVLRLMEEQGYLSPKE RQMAAANPAELSEAAAARAGGYFADWIMDTVPSFLGDQTTEDVVIRTTLDQRLQQAAE DAVNYVFENKVRAGSKAQTAVVVMSADGAVRAMVGGRKVRASGVFNRATQAKRQTGSA FKPFVYAAALELGYSPYDRVLDAEYCLDIPGSGPWCPQNYTRKFYGEVTLARALRDSL NVPAVKVSEAVGRDKVRLVAGEFGIESDLADGPSLALGVSESTLLEMTGAYAGILNGG SSVTPYGVEALTLVGDSEPLMGASGGMGERVIRPVAAQELIWMMEKVIAEGTGQRAQI PGWQAAGKSGTTSSAKDAWFIGFTADYVAGVWMGYDDNTPLTGVTGGGLPAEIWRETM VRVHDGLAPQPLPMAAPEPIVVPEPQPQRRNGGGFGRELERTLNGVLQDIFGN" /product="penicillin-binding protein, 1A family" /transl_table=11 /note="identified by match to putative ortholog SPO3725 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 155657..155995 /locus_tag="Silicibacter_170" /function="COG: Nitrogen regulatory protein PII" /gene="glnB-2" /translation="MKLIIAAIKPFKLEEVREALTKLGVSGLMVTEIKGFGAQAGHTE IYRGAEYEVNFVPKVKLEIVVPSDLADQVVETITQASRTGKIGDGKIFVLDVAQAVRV RTGETNQDAL" /product="nitrogen regulatory protein P-II" /transl_table=11 /note="identified by match to putative ortholog SPO3724 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 156025..157347 /locus_tag="Silicibacter_171" /function="COG: Ammonia permease" /gene="amt-2" /translation="MKKLTVTLAATALATLPGLAFAQEAAAETPDINPYIFTTLLFLI GGFLVFWMAAGFAMLEAGLVRSKNVTMQLTKNVALFSIAAIMYWLVGFNLMYPGDGWI IPGVMGPLFATTSLEPVGLGADAAALDYASVGSDFFFQLMFCATTASIVSGTLAERIK LWPFLIFVAILTGVIYPIEASWVWGEGFLDGLGFSDFAGSTLVHAAGGFAALAGALIL GPRIGKYKDGRTIPMPGSNLALATLGTFILWLGWFGFNGGSQLAMGTVGDVTDVSRIF ANTNMAAAAGAVTALILTQLLFKKPDLTMILNGALAGLVSITAGPLDPTLFGALLIGA VGGVIVVFTVPMLDKMKIDDVVGAIPVHLLAGLWGTFAVPFYTEGTSFITQIVGFATI GIFTFVVSGVVWMILKATMGIRVSEEDEINGLDMAELGMEAYPEFKGS" /product="ammonium transporter" /transl_table=11 /note="identified by match to putative ortholog SPO3723 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(157420..158064) /locus_tag="Silicibacter_172" /translation="MRGVFFTVLTAAGLVAGAAQAEGERAGAFDYYVMALSWSPNWCA IEGDAKGSEQCDDRHDYGWTLHGLWPQFHRGWPSYCRTTEAPPTRRQTGEMRDIMGSP GLAWHQWKKHGTCSGLSARDYFALSRQAYDTVTRPEVFRRLDKAVRLPASVVEEAFLK ANPSLTADSLTITCRDGFIQEARVCLSRDLDPVPCGRDVIRDCTLSNATFEPVR" /product="ribonuclease T2 family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3567 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 158234..159001 /locus_tag="Silicibacter_173" /translation="MAKPLMAKATAVWLVDNTTISFKQIADFVGMHELEIQGIADGDV AAGVKGFDPIANNQLTQEEITTAENNPLHKLKLKFNAAAAGEEKRRGPRYTPLSKRQD RPNSILWLVKFHPELADAQIAKLVGTTKPTIQSIRERTHWNIANMEPIDPVALGLCKQ SELDAAVQKAAKKRAAEGGVMNDDERRKLVSTEQSLEMDAEPKIPSAIEGLETFTLGS SDEDDKKEDEIVDADSFFNLPASSDEDEDDDSDDPRY" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3566 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 159213..159713 /locus_tag="Silicibacter_174" /translation="MTLQVTLTPDLVQAPLVTFGFDPFEARLVSIMRHFVAAANAPGS QAWHRAFVIAAENWGEAHGLAVAHTLWPVVRELLELREGDFTSNDPLDLDTRDLLTTD EAQFIAMLHHMRRDHTAKARDAVEALTHGQMNPDLIRAGLSFADRFPSGARQRLRGTP ALRVVG" /transl_table=11 /note="unique gene to TM1040, might have function in sulfur transfer, belas" /note="Hypothetical protein" CDS 159842..160693 /locus_tag="Silicibacter_175" /function="COG: Rhodanese-related sulfurtransferase" /translation="MDDPKTLVSTDWLAAHLKDPDLRILDASWYLPQMERDAKAEYDA EHIPGARFFDIDEISDHRSDLPHMAPPVEKFMSRLRAMGVGDGHQVVIYDGAGLFSAA RVWWLFRLMGQVNVAVLDGGLPKWKAEGRPLEDLPPVIRDRHMTVRVQNHLVRDVTQV SSAAKLGDHEIIDARAAERFRGEAPEPRPGMRAGHIPGSKNVPFTTLLNDDGTMKDAE TLRSLFEAAGVDLTKPAITSCGSGVTAAVLSLAMERMGKHDHALYDGSWSEWGAFPTL PVATGDN" /product="thiosulfate sulfurtransferase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3719 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 160697..161881 /locus_tag="Silicibacter_176" /function="COG: Aspartate/tyrosine/aromatic aminotransferase" /gene="tyrB" /transl_table=11 /note="identified by match to putative ortholog SPO3720 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="aromatic amino acid aminotransferase" /translation="MFENLKPQPADKILALMQMYREDPRDQKVDLGVGVYKNAEGVTP VMRAVKAAEQRIIDEQTTKAYTGLAGDPAYADAMIDLILGTSVERSKIAAVATPGGTG AVRQAFELIKMANPEARVFVSDPTWPNHVSILKYVGIETVVYRYFDTETRAVNFDGMI EDLKGAKTGDVVLLHGCCHNPTGANLNISQWQAVVELLNERGLIPMIDIAYQGFGDGL EEDAAGVRLVASSVPECLIAASCSKNFGIYRERTGLLMAISQKGDEAGLNQKTLAYLN RQNYSFPPDHGARVVTTILNDPELRADWQKELEETRLGMLALRQQLADELQRLSGSDR FGFIAEHRGMFSLLGTTPELVEKMRVDAGIYMVGDSRLNIAGLNAQTVPILAKAIIDA GV" /EC_number="2.6.1.57" CDS complement(161983..162597) /locus_tag="Silicibacter_177" /function="COG: Enoyl-CoA hydratase/carnithine racemase" /translation="MIDHHQDSRGLLTLRLNRPEKANALTPEMLAQMIEILRTATEAR ALILTGTGKVFSAGADLDAAKAGLATSPLWEELSGALAALPCLKVAALNGTLAGGANG MALACDLRIAVPTAKVFYPVMQLGYLPQPSDAKRMRALVGPARTKLILAAGQKITAEE AYGFGLIDRIVAPEELMAEAEALVAPALAAEPDVARAILRAADA" /product="enoyl-CoA hydratase/isomerase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3439 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(162594..163343) /locus_tag="Silicibacter_178" /function="COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /translation="MKFANKTIVISGASRGIGASAAKEFAAEGANVVLLARSADALEA LAQEIGEKALALACDVADYAAVEATFARARDHFGSLDVLICNAGMIDPIARLEEADPA GWAQLINVNITGVFNMMRAGLPHLKAAGGGAVLTIGSGASQRPLEGWSAYCTSKAGAA MLTEALHLEEGENGIRVMGLSPGTVATQMQREIKASGINPVSQLAWEDHIPAEWPART LMWMLSADADEFVGTEIALRDEGIRKRVGLI" /product="20-beta-hydroxysteroid dehydrogenase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3440 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 163478..164992 /locus_tag="Silicibacter_179" /translation="MSISFVRKLGAVAPVLLIAQAAHADVTAQDVWADWKDYMSSTGY EITATETESSGKLTVSDITMSMDVEGDSFSMTMGSLDFIENGNGTVNVVMPTTFPMSF NVNADGDAISGDLLYTHDGSPMVVSGDTSEMAYNYTGATSAISLANLVIDGDAVPADA IMLNVNVTDMVSNTLMKIGDVRSYSQTMTMASVAYDFMFQEPEGDDGAAFNGALQGLE FTGDMTIPEVDDPSDLAAMLKAGMAYVGGFTFESGNTNVKGSDGPDNFDFQTSSNGGA INIGLSPAGLNYDVTQRDTTLNMMGSDIPFPVSLSMKEMGMNFAMPLTKSDEEQDFAL GIALREFAVPDMLWGLIDPAGELPRDPANLVVDLSGKGKLFFDLVDEEQMAAVESGEE MPGEVNSLSINEILLSVAGAELTGDGAFTFDNTDLESFDGMPAPEGEASLKLVGANAL IDKLIGMGLVSEDDAMGARMMMGMFTVPAGDDTVTSKIEVNEEGHVLANGQRLK" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3441 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 165054..166475 /locus_tag="Silicibacter_180" /function="COG: Predicted Zn-dependent proteases and their inactivated homologs" /translation="MAQSPCDTAALWLALVQCHPFAKVPMTQTPETLCHALLDAAQKA GADSADAMAAEGSSLSIEVREGALEHAERSEGVDIGLRVFVGQRQAQVSSSDTRPETL TAMAERAVAMAKEAPEDPYAGLADPAQLAKSWDLDALEMADPSAEPAPDQLQQDALAA ESACAAIDGISQVQSAAAGYGRHDIHMAASNGFSGGYARTSRSISCVGIAGTGTGMER DYDGDSRIYQTDLRSAEEIGRTAGERAIERVNARRPKTGAYPVLFDERISSSLIGHLL GAANGASVARGSSWLKDSLGAQILPEAFSVIEDPLRPRVSGSRPFDGEGLPTQRRAIV DKGVLTGWTMDLASARKLGLESTGNAARGIGSVPSPSNWNIALTQGQQTREELLRDMG TGLLVTSMIGSTINPNTGDYSRGASGFWVENGEIQYPVNEVTIAGNLLDMLKTLVAAN DARTHLSRVVPSLLVEGLTLAGE" /product="PmbA" /transl_table=11 /note="identified by match to putative ortholog SPO3442 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 166462..167262 /locus_tag="Silicibacter_181" /function="COG: 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase" /translation="MPENDLSLLIGAAQKAGEIAGQFTGTEAQKWDKPDGAGPVTEAD LAVNRYLEDSLRAARPDYGWLSEESEDDPTRQSRARVFVIDPIDGTRSFADGSRTWAH SLAIVEQGTPIAAVVYLPQRDLLFAAASGQGATCNGARLQTTRAQNPETAHILSAKPT LEAKHWQGGTPPGFQRSHRPSLAYRMSRVADGSYDAMLTLRPTWEWDIAAGVLIVQES GGRATDRDGAPLRFNRADALQNGVVAGGPKMHRALLNRLVYGAQGSKP" /product="inositol monophosphatase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3443 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 167262..168458 /locus_tag="Silicibacter_182" /function="COG: 3-deoxy-D-manno-octulosonic-acid transferase" /translation="MFGPGGTQIPNPLRLKRPEGELVWAHATTQERLLGLCDVGCRLK MMRPDLSVMLTWEEDMRPAKLPEGCDIPLGPLTVEQPNDIRNFLDNWSPDVCVWAGGR LRRLLMRHMREREMPALLCDIDADELPSRASRWLPDQRHRLLNGFAAILVPGTEVSER LKRAGVAPERIHPAGRLFQSSTPPSCNDDELAQMQKQFASRPLWLAAHVSLSELPAVL KAHRGALRLLHRLLLVLTVDTFEDLDAARSLLRKEGLSFADWDMGEDPEDHTQVAIGL TENLGLWYRLCPISFLGNSLIRGAQGTNPLDAAALGSAILHGPGVVAHAQAYQRLAAL DAAERIHGEEELADAVFRLSSPDRAAEMALAGWQVVTEGAVMTDTLLERIQDLLDQSE LSHAPA" /product="3-deoxy-D-manno-octulosonic-acid transferase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3444 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 168445..169446 /locus_tag="Silicibacter_183" /function="COG: Tetraacyldisaccharide-1-P 4'-kinase" /gene="lpxK" /transl_table=11 /note="identified by match to putative ortholog SPO3445 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="tetraacyldisaccharide 4'-kinase" /translation="MRPPEFWNKPPSHFDLRACLLSPLGALYAKGTATRLRKGAPTRA PVPVICVGNLNAGGTGKTPTVIWLMEQLGAAGHEVHVVSRGYGGRLEGPVQVDPRRHS AADVGDEPLLMAAFGEVWVARDRGAGVTEAAAAGASVIVMDDGFQNPSVAKDFSIIVV DAKRGFGNGRCLPAGPLREPVATGLSRADLVLSLGDARAQETFQSIWGAEIPVPHLTG HVEPLPTGMPWQGTKVLAFAGIGHPEKFFATLRGLGAELCRAEALEDHQTLAPALLTR LEQEARLLGAQLVTTEKDAVRLPLSFRPKVITLPVRLRVAQGDTLLARLKDIAPPPD" /EC_number="2.7.1.130" CDS complement(169483..170184) /locus_tag="Silicibacter_184" /function="COG: Thiol-disulfide isomerase and thioredoxins" /translation="MTRIMTGICAAVAVAAGVYAINNFSGREDNASLLDIQLVSAANA QESSQGAEAAEVDTSTIMEMVQGAEDAPVTLIEYSSYTCPHCANFHADAYKKLKAEYI DTGKVKLVYREVYFDRFGLWASMVARCGGEEKFFGITDLIFKQQAEWTRAGGPAEMVE ALKKIGRVAGVDGDALEACLQDATKAQTLVTWYQENATKDDISSTPSFILNGTKIANQ PYEDLKALIDAELEG" /product="thiol:disulfide interchange protein, DsbA family" /transl_table=11 /note="identified by match to putative ortholog SPO3446 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(170181..170708) /locus_tag="Silicibacter_185" /translation="MAYRHSSTRGFKRTGSLLNDQIRKAGESRGFAVSRLLTHWEEIV GPELAAMARPVKVGYGRGGFGATLTVLTTGAMAPMLEMQKAALREKVNAVYGYNAISK LHITQTAPIGFADGQVDFRYAPKTRKQEEPAPEDVAAAKETATGVENDDLRAALERLG RNVLTRQKSLRKGYK" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3447 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 170794..171855 /locus_tag="Silicibacter_186" /function="COG: A/G-specific DNA glycosylase" /gene="mutY" /transl_table=11 /note="identified by match to putative ortholog SPO3448 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="A/G-specific adenine glycosylase" /translation="MRDHPVSAEQLSQDLLVWYDTHAREMPWRVGPAARASGVRPDPY RIWLSEVMLQQTTVAAVKDYFERFTRRWPRVGDLAAAEDGDVMAEWAGLGYYARARNL LKCARVVAEEFEGVFPDAYEGLIALPGIGPYTAAAISAIAFDRPETVLDGNVERVMAR LHDEHEPLPAVKPVLKAHAAHLTPSARPGDYAQAVMDLGATICTPKSPACGICPWRDP CRARVKGTAPELPKKTPKKPKPTRYGFVYLARSAEGDWLLERRPDKGLLGGMLGWPGS EWNDAPTETPPFDADWQDLGAEVRHTFTHFHLILQVRSAELPADFEPRAGQELVRRHD FRPSSLPTVMRKAFDLTHR" /EC_number="3.2.2.-" CDS 171936..173078 /locus_tag="Silicibacter_187" /translation="MTEFIPTEKLRDWRHALPFWLSLALVPLVWAGAYLGSWWVLMTP LATWYLFAVLDGVLGLELENADPQTAEADLKWYVRLTSVWVPIHVLCLFGLIAYVSDA THLSRLEKIGVFFGMGVISGTIGINYSHELMHQRSRLERWLADILLAMVLYSHFRSEH LLVHHRYVGTPRDPVTARYNEGFHRFYPRVLWQCWRSAFGAEADRLARKSLPWTHRSN PFWRYWALQLGMLALAFALGGLSGVLLFLVQASAAIWQLELVNYIEHYGLTRKHLGDG KYEHVKPHHSWNAAHKASNWLLINLQRHSDHHYKPDRRFPLLQNYSASEAPQLPYGYP VMSIAAMIPPLWQRIMNPRVRRWRKQYYPEITDWKPYNRHQTPMPR" /product="fatty acid desaturase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3449 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(173284..174780) /locus_tag="Silicibacter_188" /function="COG: Methyl-accepting chemotaxis protein" /gene="mcp" /translation="MVTSPFQKVYVMSQIHRDELLFWFGLGEEDRSSIVGMAPLVERH IDAVLDDFYDLCLSRPETKGYFPTEQIVAHAKAAQRAHWVKLFSGRFDDSYMSSADKV GRVHFEVDLPFHLFLGGYATVGDRILKVVLTQKNGWRGTKARMKQARALQRLILFDCE RVIAGYIDAQLQEREKALTVMTQGIQRLESGDLTTEMPSGDKGGLPERYDNVRLSYNH LLRHWSGILSDATRRAHSVDAKMAETARMTREMAHRSGEQASTLNETVTSVNSMTCST RLTSEKVNDAAKQIEANRLVAEEGGAVVRDAITAVERIEQSSSQINKIVDVIDEISFQ TTLLALNAGVEAARAGEAGKGFAVVASEVRALASRATDAADDIKKLIATSSDQVLEGC QLVHQTGERLDSIRSSADNVARIMQEVDGVIFEQTGQLENISERMERLDRYTQDSADQ ANEVSSTADALAQDSAALKASMDGFKTGDIALREAAQDKEFERLANRG" /product="Heme-based aerotactic transducer hemAT" /transl_table=11 /note="Bacterial chemotaxis sensory transducer, Methyl-accepting chemotaxis protein (MCP) signaling domain, Heme-based aerotactic transducer hemAT (Transducer HtB protein)., , belas" /note="High confidence in function and specificity" CDS complement(174808..176202) /locus_tag="Silicibacter_189" /function="COG: Adenylate cyclase, family 3 (some proteins contain HAMP domain)" /translation="MADVALTKADPPARASLDPILQDDALQSQHIHAALEEHKKRGVE MAVLARWIIMPMVAVFLIAVYPEPSQLYYVALLALLCVNGFFIRRFARVGRSRAELGL IMLDLVLMTFGMVVPNPFDPNEMPVPMLYQYDNFMYFFIILATGALAYSWRTVMAIGV WASVIWLGAAGLMWAFMTPDEELARRLSEVLVDWPHVQDLYNPNDVGFRFRIQEAMVF LMVAAILAQSTRRFYLMLDQNADLARERANLSRYFSPNVVDQLSQNDEAISQVRTSRI AILFVDIVGFTRLAEHRDAVEVIELLRGFHGRMEAEVFRHGGTLDKYLGDGLMATFGT PAPGPQDASDALACARAMCAVLDQWNAERRATGEPEIHAGIGIHFGEAVQGDIGANRL EYAVIGTAVNIASRLEGMTRPMQARIVMSDALYRRVQEEGGAAALLRGFHCTPEQTIR GLQEPMPVWALTSL" /product="adenylate/guanylate cyclase" /transl_table=11 /note="identified by match to putative ortholog SPO3450 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 176269..176361 /locus_tag="Silicibacter_190" /translation="MSRHMQKTPPDRRGKVQRAEPLGSALSAFE" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(176386..177555) /locus_tag="Silicibacter_191" /function="COG: DNA modification methylase" /translation="MTHLVDNQNERKSAVVIEAEQMNKTIAKGAATALPLNTILDGDC IERMASLPSNSIDMIFADPPYNLQLKGQLHRPDNSKVDAVDDEWDQFSSFGVYDQFTR AWLKEARRILKPNGALWVIGSYHNIFRVGTALQDEGFWILNDVVWRKSNPMPNFRGKR YTNAHETMIWASKSEGAKYTFNYEALKALNEGIQMRSDWVMPICTGHERLKDANGDKA HPTQKPEALLHRILVGSTNPGDVVLDPFFGTGTTGAVAKMLGREFIGIEREEAYRKVA EERIKNVRKFDREALQVSASKRAEPRVPFGQLVERGMLRPGEELYSMNRRHKAKVRAD GTLIGDNIKGSIHQVGAHLENAPSCNGWTYWCFKKDGKTVPIDVLRQQIRAEMQA" /product="modification methylase" /transl_table=11 /note="identified by match to putative ortholog SPO3451 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(177601..178290) /locus_tag="Silicibacter_192" /function="COG: Ribonuclease HII" /gene="rnhB" /transl_table=11 /note="identified by match to putative ortholog SPO3452 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ribonuclease HII" /translation="MRPFFCAAFGAPSCMRAANALSGGMDYPDLSLEEAAQARGYTRI AGVDEVGRGPLAGPVTAAAVVLDLADLPEGLNDSKKLTPRRRAALEPEIMARASYAVA HASVEEIDHHNILRASHLAMERAVAALDPQPDYLLIDGNLIPRALHIPAEAVVKGDGR SLSIAAASILAKEARDRIMVDLAQQFPGYGWERNAGYPSKQHRDALIKIGVTPHHRRS FKPVHKILYQE" /EC_number="3.1.26.4" CDS complement(178334..178801) /locus_tag="Silicibacter_193" /translation="MTRLASSTRNLHRKFIAAVIATALVITGFSAAPARADSDDIAKF IAGAAILGIIGAAINDHKKDRHRPPHVDPTPAPKPLPPRVRRYDLPAQCLTSIRVHGK ERNLLGMHCLRRNYTHVNTLPNRCYREFDNRTQSRRGYRPACLRQYGYRLVRL" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 178980..179273 /locus_tag="Silicibacter_194" /translation="MKHTRLLPALLLLLLALAQPAQAAGCYADYKAKQDQPLKLHYGV MELSGDCSKAAAKGEVAERLSRAGWTLLNVLTVFGPEGLEQRKADAGRNFLRF" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3453 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 179245..179946 /locus_tag="Silicibacter_195" /translation="MPDATFSVSEVRHAGSRVIALGIGAIVALLVVAGTVLLLTLPDG NAFNARIERLFVENDLTTQAEIKLLEILAQSGTAFADTLASYRMVIFVLLVFATAMMI AALVVLAMLVMLNRRMAQIERAGIQVTELLISREENTVYLNNMGFKLTQAAMETLSVL AEARLDDDVLSGAEIEAVISGKSSHDCEEAAGATRIKRLRDTLGNQMISELLVKNIAK RGYVLAINKDVIRMV" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3454 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 180524..181714 /locus_tag="Silicibacter_196" /function="COG: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis" /gene="spsC" /translation="MHQGEPIPEAARDAIEALMQSGDLFRYTAPQDAPVSLLETEFAE LLGSKYALAVSSCSAALFLSLKALDLPRDARVLIPGFTFAAVPSSVVHADCVPVLCEV GENYRINMADFEAKLDQDIAAVIISHMRGHTSDMDAIMALCEARDIPVVEDAAHSLGT TWHGRNIGTIGKVGCFSFQSYKMLNAGEGGILVTNDADVVARAVIMSGAYEHNWQKHK PARGDNGTALAEAFGRWQNLLPLYNLRMSNLSAAVIRPQIPELARRVADGLKNHDYVA AKLNAHANFHVPAPLAPERRAPDSIQFNLVGMDDAQIEAFAKATADKGVKVQIFGRST DNARAFWNWQFLKDLPELPETRAMLMRACDVRLPVRLTQDELDVIAQILLSSVEETMA RAAA" /product="Spore coat polysaccharide biosynthesis protein spsC." /transl_table=11 /note=", DegT/DnrJ/EryC1/StrS aminotransferase, DegT/DnrJ/EryC1/StrS aminotransferase family" /note="Conserved hypothetical protein" CDS complement(181780..181911) /locus_tag="Silicibacter_197" /translation="MRLGVRVDMLRGSAPARLRHIKMWRRPLGRAPRCRAAGDRALM" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(181964..182521) /locus_tag="Silicibacter_198" /translation="MAEQDKPLLIKRYASRRLYNTETSDYVTLEDIAGFIRDGREVQI IDLKTGDDLTRQYLLQIIAEHESRGENVLPVNVLNDLVRSYMVPGGGVMPQFLQASFD MFRDSQSKMMENMNAMNPMAQMPGFEAMKAQQEAFLKAMTGGFGGGWTGGGGEDGSPA AEGEEDLGDIKRQLAELQEKLSKLS" /product="polyhydroxyalkanoate synthesis repressor PhaR" /transl_table=11 /note="identified by match to putative ortholog SPO1294 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(182849..183295) /locus_tag="Silicibacter_199" /gene="phaP" /translation="MAKTQDFSAMMKDMMASFPVDTSAMEGFFKSSAALNEKLSAVAL DAAEKNAEISSKWTKDTLTKMGEISKAKTEPADYAKAATDFASASAEVAAENMAAFAE VAKKVQMDTVELLMAAGKDMSEEASAVVKKATEEVSTAAKKAAAAK" /product="phasin, PhaP" /transl_table=11 /note="identified by match to putative ortholog SPO1293 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 183731..184069 /locus_tag="Silicibacter_200" /translation="MRASPAPSLRLPGDCISGGGAAISLFMPSGLISATKRPRHRDPA LRRGTQTTDRQTTSGSITSTGQKRRVCLDGPHWRSRGARASGFSMRAVRHGRFAAPGL WSPRDARPRN" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 184165..184935 /locus_tag="Silicibacter_201" /translation="MPPAPASKCSLLLARFQPRRVSRGASWLGLSLTFCLLALLLSAC GRSPTEREQMFLGKIHGESLDYSRLRLVEGAPLRAVTFRRPQRPRVTCRERILPPRPA GELVTASPAALALFNHIFFTRDWFLPDYTPEYPEALHLVEAMLLAHEATHVWQWQNRA VTGYTPLKALGEHSRSSDPYLFDLDGPADFLAYGYEQQGTIVEEYVCCRALAPDAART QRLHAMLARVMPVSDLPQSRESDVYLPWKDAKVAGICD" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1128 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(185102..185785) /locus_tag="Silicibacter_202" /function="COG: ABC-type spermidine/putrescine transport systems, ATPase components" /gene="lolD" /translation="MSEVTLKIEGLRKTYLAGTPGEVAVLRGVDLTLHAGEVVALVAP SGAGKSTLLQIAGLLDVADAGRVEIAGQDMAGARDRKRTRVRRQDVGFVYQFHHLLPE FSALENIVLPQLANGISQRDAEARGAELLALVGLETRAAHRPAALSGGEQQRVAFCRA LANRPRLLLADEPTGNLDPATSDQVFEVLMQLVSETGLSALIATHNLELAARMDRVLH LEDGVLVER" /product="lipoprotein releasing system ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO1124 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(185778..187061) /locus_tag="Silicibacter_203" /function="COG: ABC-type transport system, involved in lipoprotein release, permease component" /gene="lolE" /translation="MAATAPFSRFEWMIAWRYLRARRSEGGVSVMTWISLIGITLAVF ALIATLAVRSGFRSEFVGTILGANAHATVYAHGTVTAAGTLDRRITDYAALAEAVGQV PGVLQAAPLIKGQVMASRGDRNAGVQVYGIHAEDLAKIPGVAQSDVAYGDLGRFDDGI ALGSGVARTLGLGIGDKVKLISPNGVKTAFGTSPRVNAYEVVYVFTAGRYDIDNTRAY LPFAEAQSYFNREGVADEIEVMVADPEAVDQYVLPLLQAAGQGYGVWSWRDSSGGFLR ALEVEDNVMFVILSILVLIATMNIVSGLIMLVKNKGRDIGILRTIGLSEGSVMRVFFI CGSITGVIGTVLGVILGCLFAIYIDPIFSFVNYVMGGGVWDPSIRGIYALPAELRAGD VISAVSLSLGLSFVVTIFPARRAARLNPVEALRYE" /product="lipoprotein releasing system transmembrane protein LolE" /transl_table=11 /note="identified by match to putative ortholog SPO1123 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(187150..187662) /locus_tag="Silicibacter_204" /translation="MITRMVTLLGGAGAGLGLSQFPAYAQAYLQRLGGHVDALRRTVA EFDADAAALGLERHAALVQLAQGGEMGAARAETMAATIDRYGRLSSDLHELSAMAPVE RALHLGRFAEAEIASATLSAFEPAVAVSLDALLLAAIGALVGGGLIWGMMAGGRRVLA RRPAGRDRLA" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(187951..188373) /locus_tag="Silicibacter_205" /function="COG: Predicted thioesterase" /translation="MPAFLSFRSVVDPADCDFLGHMNVSRYFAACSDGVFAIQSEMGL TASDMREGRRLSFAVVNVQSNFRAELAAGDAIRLETSIIDVGTKSMTFRHRMFRADEN LLAFETVFKCVMFDLEARISRDIPDEVRARASQFLEEA" /product="hypothetical protein" /transl_table=11 /note=", Thioesterase superfamily" /note="Hypothetical protein" CDS complement(188400..189194) /locus_tag="Silicibacter_206" /translation="MDRSPYYGTDKIMALQRARDAQVADFADLAGAVIHARTFSSDDP AALGWDYLKKVMADEGMVTLRGADQATIAAAKSELSDFDPRLHVWDLFMADAETIRRV CDPIVQNSLPAGMRQISEAEMTPEKAREVQVFLTQQGVSPFSTDALLGRLFPARLIAL QNASDRIAAAGFAAMTHNRHSPFFNSAWVGLIAVDPELRGLGLGKHVDAICNLVAVTE LGAAATMEFVAPDNAPSRAMLESCGLRQVEGKSVVMFSTSTDRLTR" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(189399..189929) /locus_tag="Silicibacter_207" /function="COG: Dihydrofolate reductase" /translation="MHPVIYDVAVSLDGFISGPAGDISKFAHEGPVVEDYYNRLGGYK LALMGRKTYEFGYEFGMEPGQNPYPHMRSIVVSDSLQLPETSEVTVLKRPGAEGLRAE IARAEGPVYLCGGGAFAGWMLKHQLIDRLILKRAPCVLGQGVPLFGADAPAVTMERTA TTPYQNGYLLERFLLR" /product="Hypothetical protein yyaP." /transl_table=11 /note=", Bacterial bifunctional deaminase-reductase, C-terminal" /note="Conserved hypothetical protein" CDS complement(190583..191359) /locus_tag="Silicibacter_208" /translation="MQLSLDDPLWDHLPGAHGVEDVRGPLSSLLAEWDPELCNMLLWD RLYHQESLYPATWAALPWLWQIAGRHADAVAPLFDFFAHLLALAKRTPASYCAYEGLP LSGADLGHWHVSAPPAMIPPADALFEALVVWIEPWAVQVCRALNTLIEGADRAQAAHY LRGVTAWEHPEHESFERALGFLADGWSIEEMLETLEADEDVPFHMSARDISFAAQEAA RLQGLCPDLATDIRALVDAVSTDRPETPTQPHPDQKSLFR" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(191474..192829) /locus_tag="Silicibacter_209" /function="COG: Prolyl-tRNA synthetase" /gene="proS" /transl_table=11 /note=", [EC:6.1.1.15] , Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS)., Prolyl-tRNA synthetase, bacterial, tRNA synthetase class II core domain (G, H, P, S and T), proS_fam_II: prolyl-tRNA synthetase" /note="High confidence in function and specificity" /product="prolyl-tRNA synthetase" /translation="MRLSRYFLPVLKETPSEAQVVSHRYMLRAGMIKQSAAGIYSWLP LGYRVLKKIEGIVHEEQMRAGHIPMLMPTIQSADLWRESGRYDAYGEEMLRIRDRHDR DMLFTPTAEELITDIFRANVSSYKDLPLTMYQIQWKFRDEIRPRFGVMRGREFYMKDG YNFDLTKEDALHAYNRHLVTYLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGE SEVFYDSEITDLTFGAREIDYDNVEQCQAVLEEFTSRYARTDETHDEALFNAVPEERR RVARGIEVGQIFYFGTKYSEALGATVQTADGQSVPVHMGSHGIGVSRLLGAIIEASHD DKGIIWPEGVTPFHCGIVNLKQGDDEADAACEQLYAALTAIGLEPLYDDRKERAGGKF ASMDLIGLPWRITVGPRGLKNGVVEVTSRRTGESEEMSPEDAVKKIAAIYANHPTPRG F" /EC_number="6.1.1.15" CDS complement(192900..193025) /locus_tag="Silicibacter_210" /translation="MSCDIFAQSLLNSQNRAASAPARQAQAQVRGLRDAGSGCLA" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 193691..195430 /locus_tag="Silicibacter_211" /function="COG: Signal transduction histidine kinase" /translation="MTRAAKLTPDPYDVQLRELGLVQRQPDSDIDNLTRLAAQVLDAP TALVSVVQRSLDRQFFKSCVGLPELSSVLRQTPLSHSFCQFVQDANQPLIVPDSRNDA QLRDNAAVIDLKMVAYLGVPIHLPDGTPIGALCVIDRVPRQWSSDNLKTLQHLAVAVD NVIALKHARELAAEAERTAKREAEARKTYLAHMSHEIRTPLNGIIGSVDLLLREASRV NLDPREQNDLLRTINRSARNLQHLLNDALDIAKIDAGKLELAPAAFDLHETVDDVMKL FSAQACEKGVELNHSFRGIEAQEQRYGDRFRLAQILGNLLSNAIKFTDDGSVSLQING TPDALHLTLRDSGCGIAPDRLDKLFLPYTQASADVAQTKGGTGLGLTIVHQMVELMQG RIRAESVPGRGTVFHLYLPLPLTTSAPEAEKVHDPARDGIGDTAPVASPPPAPSNAPL SGKRVLIADDSPANRLVLQKMLENLGATVDKAFDGGDAFGRAVARAYDVLLLDIHMPG QTGTEVVKKLRADPRHQAHDALCIAVTGSTEKQEVEHYLDSGFDAWIGKPLRQSDLMR VLSPLLLEPPSRA" /product="sensor histidine kinase/response regulator" /transl_table=11 /EC_number="2.7.3.-" /note=", Histidine kinase, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase" /note="High confidence in function and specificity" CDS 195529..196671 /locus_tag="Silicibacter_212" /function="COG: Predicted permease" /translation="MALPARKQLKYWGIAAVLFAVVMWALGNVLMPFILGGAIAYIID PLADRLERAGLSREGATAVITVGAVLIFLILLLLIVPALINQMIDLVQTLPQALSNLR AFAQERFPSLFEDNSQLREALAGLWQIIQDKSVTLLQTFVGSAMSLLNIVVLLVIVPV VAVYLLVDWDRMVARIDELLPRDHAPVVRHLASEIDRVLSSFIRGMGLVCVILGTYYA VALMLVGLNFGLAVGFVAGLVTFIPYLGAIIGGVLAIGLALFQFWGALEGADGEMIRQ GTDWLRIALVAGIFAIGQMVEGNFLTPKLVGNSVGLHPVWLLLALSVFGALFGFVGML VAVPVAAVIGVVARFAVEQYLHSRLYQGLSHRDANVRTSEDTPTDI" /product="membrane protein" /transl_table=11 /note="identified by match to putative ortholog SPO1119 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 196725..197402 /locus_tag="Silicibacter_213" /function="COG: ATPase involved in DNA replication initiation" /translation="MSEQLSFDLPAKPALGRDDFFVAPSNAMAVALIDPAFAWPSGKL VLTGPKGSGKTHLAHVWAKESGARVVPAHALTEADVPELASGPVAIEDVPDIAEDALA QKALFHLHNMVLTHGHRLMLTGRPAPNLWGLGLADLQSRVQAATHAALEAPDDALLAV VLAKLFNDRQITPKPDVIPYLVGRMDRSFAAAAAVVEQLDRLALAEQRTLSRALAIRL MSSDQKG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1118 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 197578..199224 /locus_tag="Silicibacter_214" /function="COG: Exopolyphosphatase" /translation="MTIQPDAPHRDLDTTPPVADAPEAAAPDAAAEDWGPFGRPLFDD PDARALSRVGVVDVGSNSVRLVVFDGAARSPAYFYNEKIMCGLGAGLSETGKLNPKGR ARALEALKRFQMLAKGLLSDPLTVVATAAVRDASDGPEFCAEVEAATGLRIRVITGEE EARLSAQGVLLGWPGAYGLICDIGGSSMELAEIQDGEVGRCVTSNLGPLKLKDIKGGR KGRKAHIDEVMASLRDQLGDQRDRLFLVGGSWRAIARLDMLRRNYPLTVQHEYRMTAK DVRETIKFIEQNDLEKLRSDCGVSSARMALVPYAIDVLARLIKTFRPKDIAISSYGIR EGLLYEQMPDRLRQRDPLIEAARFAEAKDARVPGFGKTLYTFVKPLFSGAPYAKMRLV KAACVLHDVSWRAHPDYRAEVCFDNATRANLGGLKHSERIFLGLALLHRYRNKRQGTH FEHLYDLLPSEKQKEAEILGKAMRFGAMLMVGEDQDIGRLRWQPRKRTLHVELPAESA ALFGEVAQSRLMSLVNTLKAEVRVSVAGRRGALLEKDARD" /product="phosphatase, Ppx/GppA family" /transl_table=11 /note="identified by match to putative ortholog SPO1117 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(199292..199732) /locus_tag="Silicibacter_215" /translation="MTLVRARYTWLMIQHRHITSRLGLALGVCLALAGPPLSAQEAPT ENNGADGPSLMERGMELFFEGLRREMEPTLEEAARLLSEVGPSMRSFLAEMGPALAEI ADQVEDWSVYEMPEILPNGDIIIRRKDPKPEPAPAPQPDDSIEL" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(199756..200790) /locus_tag="Silicibacter_216" /translation="MRLSTYNIEWFEALFDAQDQLQLDSAPSARHEISRGAQAEAIAD VLRAIDADGIVIIEAPNSGKHQSTERALVRFAEWAGLRTRDVVMGFANDTRQEIAFLF DSNVLTAEHAPLDTARAPRFDGTFEMDLDVDAKADLVRFSKPPMELLVTPRTGPPFHL IGAHLKSKAPHGARTPEEARAMSIANRRKQLAQAVWLRARVEDRLEAGAPLVVMGDLN DGPGLDAYEALFGRSSVEIIMGQELFDPHARHLLRPNQQGLPTSARFYNHLEGRYFQA LLDYIMISPPLQACAPRWRIWHPFEDAACYGTPSLCHALLTASDHFPVTLDLDLTQAS RPEDGGDLQI" /product="endonuclease/exonuclease/phosphatase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1109 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(200771..201478) /locus_tag="Silicibacter_217" /function="COG: DnaJ-domain-containing proteins 1" /translation="MSIWTRITEALAALTQGESLAQVFDRLRTPPERTVGFTIAVIAL GAKMAKADGQVTRDEVAAFREVFQIAAEDEAQAARVFNLARQDIAGYDDYARRIRAMF SDDPETLCDLMEGLFHIAIADGFYHPNEDVFLEEVSRIFGQTDAQFRSLRARFVEDAP KDPHEVLGVSPGTPLEDIRRIWRRLVRDNHPDAMMARGVPPEAVQLAEKRMIDINRAW EEISGKAQARDHAPQHV" /product="DnaJ-like protein DjlA, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1108 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(201488..202021) /locus_tag="Silicibacter_218" /function="COG: Histone acetyltransferase HPA2 and related acetyltransferases" /translation="MAPRIRAARDGDTEAITHLQRHIIDTTLATFATEGRSLSDWQDD ILYGDPPILVAEAEDGQFLGYATYSGFRSSEGYRHTGEHSIYLTEAARGQGVGHKLLS ELENRARAAGIHVMVAAISSANPAAARFHARCGYAEVGRMPQVGRKWDQWLDLILMQK ILREQGTAPPDSAQRSR" /product="phosphinothricin N-acetyltransferase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1107 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(202021..202659) /locus_tag="Silicibacter_219" /translation="MSPRYAPRHKDIAMELDHFAIAAPTLSEATAYVEEALGVPLQPG GAHQVFGTHNRLLGLAEGLYLEAIAIDPEATPERQPRWFDLDRFEGAARISNWICRST DLEADLAALPVEAGTPVALTRGDLAWQMAVPATGCLPFDNVFPALMRWQGPHPAPRLT QQGCSLRRLVVAHPEARALAEMLPLRDARVVFELGPAALRAEIDTPHGLRHL" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1106 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 202852..203349 /locus_tag="Silicibacter_220" /function="COG: Lactoylglutathione lyase and related lyases" /translation="MNTPQTPEDWAAEHILGIYETHLPVRDLDRSLAFYTGQLGLKLA RRLPERDVAFLWTGPKEVGMLGLWGAGSAPLGMSLHFAFRATKAAVLGACTQLPAQGI TPLGFTGDPITEPVVLGWMPAISVYFKDPDGHSIEMLHMLEDAADPAFGVQSYSDWQN RASQA" /product="glyoxalase family protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0321 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(203535..203654) /locus_tag="Silicibacter_221" /translation="MEEWFADRAAFDAHQLRAGASLWGQKTQGIRREYKVTED" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(203679..203831) /locus_tag="Silicibacter_222" /translation="MRDPAFKGRVYLSGHLFCASAQEQALVEQYLPEHIRLTRAEPGC LSFEVT" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Dimeric alpha-beta barrel" /note="Hypothetical protein" CDS complement(203847..205976) /locus_tag="Silicibacter_223" /function="COG: Methylmalonyl-CoA mutase, N-terminal domain/subunit" /translation="MTQTPDDWRALAEKELRGRPLEDLTWQTLEGIDVKPLYTAEDTA ELGHMGTLPGFGPFTRGVKATMYAGRRWTIRQYAGFSTAEESNAFYRRNLAAGQQGVS VAFDLATHRGYDSDHERVVGDVGKAGVAIDSVEDMKILFDGIPLDQVSVSMTMNGAVI PILASFIVAGEEQGHDKALLSGTIQNDILKEFMVRNTYIYPPEPSMRIIADIIEYTSN EMPKFNSISISGYHMQEAGANLVQELAYTLADGREYVKAAIEAGMDVDKFAGRLSFFF AIGMNFFMEAAKLRAARTLWHRVMTEFGAKSDRSKMLRTHCQTSGVSLQEQDPYNNVI RTAYEAMSAVLGGTQSLHTNALDEAIALPTDFSARIARNTQLILQEETGVTNVVDPLA GSYYVESLTAELVDKAWAMMQEVEEMGGMTKAVASGMPKLRIEETAARRQAMIDRGEE VIVGVNKYRKDKEDPIDILDVDNVKVRESQIARLEQIRASRDAAACEAALAELTRRAS EGGNLLEAAVEAARARATVGEISMAMEKEFGRHRAEVKTLAGVYGAAYEGDEGFAAIQ KSIESFAEEEGRRPRLLVVKMGQDGHDRGAKVIATAFADIGFDVDVGPLFQTPAEAAQ DAIDNDVHVVGISSQAAGHKTLAPQLIAELKAAGAEDIIVICGGVIPQQDYDFLYKAG VKAIFGPGTNISTAAQDILELIREARS" /product="methylmalonyl-CoA mutase" /transl_table=11 /EC_number="5.4.99.2" /note="identified by match to putative ortholog SPO1105 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(205939..206892) /locus_tag="Silicibacter_224" /translation="MKVILHIGAHRCATRSFQNYMTRKSDTLSQYGIAFMGPERTRNG LLHGIQPGAISVTGRDPMARARGRIALQLAGLQNAGTASVVISDASMLQPLEQCFALG ALYPAAGEHLARLDHAFDGAVSDVMLNIRSPEMFWASALAVRLEHSLRMPNAATLSRI AEATRSWRDVIQDIYCAMPGARIRVFPYEVFATQPEAQLSAVTGVDCPHARGAFRLNA SARLPELRAELPPRLAKLLPEDEGRWMPFSEAEAARLRESYYDDMMWLVGGADGLAEL VEDPNKADATATPPAPDLVVQEDLTRGRMHDPDTGRLAGTG" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1104 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 207049..207573 /locus_tag="Silicibacter_225" /translation="MNRLQRLTLLAALTALPLAQSVSAQEAEGQSPAPDATLSEDAAP ADLSAEEAAPAFEIRDGYDVDIAEYQWTHRPVVVFADSPADPRYQEQIDELLQDIPAL MTRDVVVFVDTDPKARSALRKKLRPRGFMLVLLGKDGGVKLRKPLPWSVRELSRTIDK MPMRQREIEARREG" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1103 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(207692..208231) /locus_tag="Silicibacter_226" /translation="MSLPHPPSRPRRLLRAFAGVALAAVVTGSCSLDQEEQVRAQVQD WVKLGETYYFFSRVNCTAALFEVKASRISSKVKKVRDVEAGMRAISEEIAVAFEVEGL SPTEVTEEIMNRDLPMGIGVLSSGTGGKDCMAIEMEEAYFNALLDPTSALIYHPTAKF TVVFDRRNRRIFYSRGRTS" /product="lipoprotein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1102 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(208456..210486) /locus_tag="Silicibacter_227" /function="COG: Biotin carboxylase" /gene="pccA" /transl_table=11 /note="identified by match to putative ortholog SPO1101 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="propionyl-CoA carboxylase, alpha subunit" /translation="MFEKILIANRGEIACRVIKTARKMGIKTVAIYSDADRQALHVQM ADEAVHVGPAPANQSYIVIDNVMAAIKSSGAQAVHPGYGFLSENAKFAEALEAAGVAF VGPPKGAIEAMGDKITSKKIAQEAGVSTVPGYMGLIADADEAVKISNEIGYPVMIKAS AGGGGKGMRIAWTDEEAREGFQSSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLCDAH GNGVYLGERECSIQRRNQKVVEEAPSPFLDEETRRAMGEQSVALAKAVGYASAGTVEF IVDGDKNFYFLEMNTRLQVEHPVTELITGVDLVEQMIRVAAGKELSITQNDVKLTGWA IENRLYAEDPYRNFLPSIGRLTRYRPPAETAAYTPGVAPGDAGDVVVRNDTGVYEGGE ISMYYDPMIAKLCTWAPTRDAAIEAMRAALDSFEVEGIGHNLPFLSAVMDHPKFVSGE MTTAFIAEEYPEGFDGVDLPESDLKRIAASCAAMHRVAEIRRTQVSGRMDNHERRVGN TWVVAIGGQTYELRVAADPEGATVRFEDQSEIRVSSDWTPGDSLAHVDADGTPLVLKV DKITQGFRVRSRGADLKVHVRRPRQAELAALMPEKLPPDTSKMLLCPMPGLVVKINVE VGEEVQEGQALCTIEAMKMENILRAEKKSVVSKINAAAGDSLAVDDVIIEFE" /EC_number="6.4.1.3" CDS 210796..211077 /locus_tag="Silicibacter_229" /translation="MPASRAEMSVLRIGMLLWVFQHVWLQMCQYDADRPDPLSTYHPH GREIARHIRVKGELSRKSGAHLRAAGGTNMSSQAQALRAGDRSEEAETV" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(210630..210833) /locus_tag="Silicibacter_228" /translation="MRKTLISALLAGTAALAACGDTTGEQVLYGAGAGAAGAALLNGS LVTGAAVGAAGNLIYCKENPGRC" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(211370..211717) /locus_tag="Silicibacter_230" /translation="MLKHRGFPGRLPGTDFQFVIRRPNPKGVTPITRRERFRDRKPAD RRADAGFMKALWENFGDQPFERGNLDAGRLSWLFGREVVAVDDPFDPESYESLLVIDV EVARRSFPEAFEG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1097 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(211787..211930) /locus_tag="Silicibacter_231" /translation="MSKSIKFITLAGLLAAVAACAGQREEEFVVVEPEPISQEPVYTG KYK" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(212145..213068) /locus_tag="Silicibacter_232" /translation="MTSILRKITGLRKTTGHLRQNSSAFAGIAPDGDRKFAVCAQNGR CALLLHKNLTVFDTEAESVACSGSSRPSIARALGAAPAAPAGGAQSDWGRGCGNLVRA FIHLRVVKSVLAQSSGHGTAATPRSVLGSVFGTFGGAKPAPVTTRALRRAGVGLFTAR LQCALLLALVCASPLSQAHAASEGAEGADGGATASDEAQASLPVPSGQPVTLSEVLLD DAPGALWARFRFVAPEMAQMADQTTSLADMEHLCTAVAVPYLSYHDIKAERVVVSFSD QNLPFGQRAPDVTQYFETYRIEDAACVWEGF" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(213068..213415) /locus_tag="Silicibacter_233" /translation="MSARWHITRGAGGLTLSRQMPARFDVVASTTLPQGDPLRLAHQI RQDMWRKLQKVRGFSPVVQLTREGDVIRVEAGGRVAAPVAPGLSGEIADLLACPAHRA RWVAQATRSGRRL" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1095 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(214024..215556) /locus_tag="Silicibacter_234" /function="COG: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)" /gene="pccB" /transl_table=11 /note="identified by match to putative ortholog SPO1094 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="propionyl-CoA carboxylase, beta subunit" /translation="MKDILAELEERRENARLGGGQKRIDAQHARGKLTARERIELLLD EGSFEEFDMFISHRCTDFGMENNKPAGDGVITGWGTINGRQVYVFSQDFTVLGGSVSA THAQKICKIQDMAIQNGAPIIGLNDSGGARIQEGVDALAGYAEIFQRNIMASGVIPQI SVIMGPCAGGAVYSPAMTDFIFMVKDTSYMFVTGPDVVKTVTNEQVTAEELGGASTHT KKSSVADGAFENDVEALAEVRRLVDFLPANNREKPPVRPFFDDPARIEDSLDTLIPEN ANTPYDMKELITKVADEGDFYEIQEDFAKNIITGFVRLEGQTVGVVANQPMVLAGCLD IDSSRKAARFVRFCDAFEIPILTFVDVPGFLPGTAQEYGGVIKHGAKLLFAYGEATVP KVTVITRKAYGGAYDVMASKHLRGDFNYAWPTAEIAVMGAKGATEIIHRADLNDPEKI AAHTADYEDRFANPFVAAERGFIDEVIQPKSTRRRVARAFASLRGKKLANPWKKHDNI PL" /EC_number="6.4.1.3" CDS 215930..217123 /locus_tag="Silicibacter_235" /function="COG: Permeases of the major facilitator superfamily" /translation="MTRSTPPTIWTLILLSGLSALGMNIFQPSLPGMAAYFGVEYRLI ALSVPFYLAASTVIQIVVGPISDKMGRRPVMMVSLLLFLLATLGCIFATTAEVFLAFR MAQAVVATCMVLSRAAVRDMYEGPKAASMIGYVTMGMTVVPMVGPALGGILDQAFGWH ANFWLLFATAAVTLVIFYADFGETATASGKPLIAQFREYPALLRSPRFWGYSLAAGLS SGSFFAYLGGSPFVGTNVYGLNSAELGIYFSAPAVGYFLGNFLSGRYSERFGINTMVF WGAIVNIFGVGLSLSITLAGMDTVWTFFGLMCFVGLGNGMAIPNGTTGAISVRPHLAG TAAGLSSAIMIGAGAALSATASWLLVPGSNAAPLLEIMFASGCLGLVAILYVMRRERQ LGLAA" /product="drug resistance transporter, Bcr/CflA family" /transl_table=11 /note="identified by match to putative ortholog SPO1093 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 217303..218778 /locus_tag="Silicibacter_236" /translation="MGTVITSAACQSEFAVIQMNSAQFAKASHMATQKLYAGAKLREM RNRIGLTQKDFAAKLGVSLPYLNQMENNNRPVSTTVVLALAQEFGLDVTELSSGDSER LISDMREAMADPVFADDVPPLADLRLTASNAPALARAFLSLHRAYRQTHERLASLDEA LGRADARIQASPWEEVRDFFHYCDNYIDAVDRAAERFSGSGDTRQNAETALQEIGVTL TLRDMEGLRAYDPDTKVLALSHRSAPQTRLFQMLLQLALLRYGDLLEATLDFAKFQTD EARSIAKIGLANYFAGAALMPYTRFLEAAQACRHDLELLSIRFGASIEQVAHRLSTLQ RPGAKGIPFFFVRVDQAGTITKRHSATRLQFARFGGACPLWNVHRAFETPGRFLRQLA ETPDGVRYISLARDVSKPGGSFGAPVRRYAISLGCEVSHADALVFADGLDVTQASAFE PIGISCRICERQHCHQRSVPPLERRLSVDTNERSVLPYRVN" /product="DNA-binding protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1090 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(218833..219072) /locus_tag="Silicibacter_237" /translation="MSHTPHELAEEFPEKAALMSELKQSDAHFAKLADEYHEVNRAVH RAETNVEPVSEQAENDMRKKRAALKDEIWGILAKA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1089 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 219385..219849 /locus_tag="Silicibacter_238" /translation="MVCFEPFTAIKRCSLARIMRAVSSMTDLYLTEPDFEAEITILTE EQRGRQTPPHNYIRWDFGYAEDNPLEPERNLDAEIYMIWPNFLDTEGTPIQKGIPLVG TYKAWMHILVREMVCYHRKRISVGLKFNCYEGGQIVARGVVTELRAISLNGN" /transl_table=11 /note="unique gene to TM1040, belas," /note="Hypothetical protein" CDS complement(219948..221603) /locus_tag="Silicibacter_239" /function="COG: Choline dehydrogenase and related flavoproteins" /gene="betA" /transl_table=11 /note="identified by match to putative ortholog SPO1088 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" /product="choline dehydrogenase" /translation="MNADYVIVGAGSAGCAMAYRLSEAGKSVLVIEHGGTDAGPFIQM PGALSYPMNMSMYDWGYKSQPEPHLGGRELVTPRGKVIGGSSSINGMVYVRGHAGDYN HWAETGATGWSYADVLPYFKRMETWDDRGHGGDPDWRGTDGPLHVTRGPRDNPLHDAF VKSGQQAGYPVTKDYNGQQQEGFGPMEMTVHKGRRWSAANAYLKPALKRDNCDLIRAL ARKVVIEDGRAVGVEVERGGKIEVIRANIEVILAASSLNSPKLLMLSGIGPAAHLAEH GIDVIADRPGVGQNLQDHLEFYFQFASKKPITLYKYWNLFGKALVGAQWLFTKTGLGA SNQFESAAFIRSDKGIDYPDIQYHFLPIAVRYDGQAAAEGHGFQAHVGPMRSQSRGEV TLASADPNAAPKILFNYMSTEQDWIDFRKCVRLTREIFAQDAMKPFVKHEIQPGTDLQ TDEEIDGFLREHVESAYHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSSIFPRI TNGNLNGPSIMTGEKASDHILGRRLPSSNAEPWFNPNWQTSQR" /EC_number="1.1.99.1" CDS complement(221760..223217) /locus_tag="Silicibacter_240" /function="COG: NAD-dependent aldehyde dehydrogenases" /gene="betB" /transl_table=11 /note="identified by match to putative ortholog SPO0084 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="betaine aldehyde dehydrogenase" /translation="MTHPAQPKASHFINGEYVEDTSGTPIPVIYAATGETIATVYAAT PAIVEQALTAAEAAQKEWAKMSGTERGRVLRRAADIMRERNHELSVLETYDTGKPLQE TLVADATSGADALEYFGGLAGSLTGEHIQLGEDWVYTVREPLGLCVGIGAWNYPTQIA CWKGAPALACGNAMVFKPSETTPLCALKVAEILMEAGAPAGLYNVIQGMGEVGGKLVT DPRVDKVSLTGSVPTGKKVYAAAAEGMKHVTMELGGKSPMIVFEDADIESAISGAING NFYSSGQVCSNGTRVFVHKDIKEKFLARLAERTATAKLGDPMDESVNFGPMVSERQME IVLGYIEKGKSEGARLICGGNRADMDGFFVEPTVFADVKDDMVIAREEIFGPVMCVLD FESEDEVIARANDTEFGLSAGVFTKDFTRAHRVIGQLEAGSCFINSYNDAPVEAPFGG VKASGVGRENSKEAIKHFSQVKSVYVRMGDCEAAF" /EC_number="1.2.1.8" CDS complement(223421..224629) /locus_tag="Silicibacter_241" /function="COG: Choline-glycine betaine transporter" /translation="MTYLISAGILLAFALVAFCVIKWWNLEVVGVTPVPLFTFIAILF TSGLDVGLVMFPLAWDFPLYADTATEPAYGFTNPLALEFGFWGFLIWGFYFLTTFYFC VIEPRVKFFEIPVVKWINNIVIIGTCAFTGALFLIYLPYYATFMGDGETVIPAFYVIT FLVILFAAFSSTDIKYVRILSLGSTGLFALLILGMWAYSGMGLGEFAGTASNIGGYFA NIHKFVLPLTDYHEFYLFWWFAWSIMIGQFTSRFVGGLKTWQVLAALLIFPSIPLGVW FSVLYYYHLNEIPTTLVINISMVVVGVIFVINSFDSLIRLYTDNLNLTSKRFGKLPYI LGNAVVLFALTVAFQSQWLQIQWIGAVVIGLYVACLIYIFVNKREEVMAIKASPEEND LDFSKIETVH" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1087 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 224827..225417 /locus_tag="Silicibacter_242" /function="COG: Transcriptional regulator" /translation="MARKRIRDIRNEELIEATIITVHKRGYGTVTMAEIAREAGASAA SISYYFGSKEGLMEATMRHLLRKLRKAMVEGYAQARSPLERLYAVMDANFADSLYSVP QCSIWMQFWANAPYSPSLARLHRINRARVRSHFVAELSQLVPADQVETARQALQSYMD GVWLQAAQSEQPLDTEAARTAAHRVVDLVTSRALAA" /product="transcriptional regulator, TetR family" /transl_table=11 /note="identified by match to putative ortholog SPO1086 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(225493..226566) /locus_tag="Silicibacter_243" /translation="MSFPAVRRLCLLAATLALPSAGQAALDLCNDTTAAQRVAIGFQE AGDWTSKGWWDLPAGSCTEVLSSASTSRFYYLRVETEGWAFTDDRLGFCVADTDFEIK GEDGCARRGFRQENFARIDTRGAAAPDPTAQTRPAADPDTGSDAARRTFTHHLSAHLT PIKSDVPARHVVQSGFSTKAVFQGCDAETTAYASFCTFIGAGRRYLVYDDGRTSAALW QEIQQAIRGRRYTLEGLREDLFDTTSELVLRAIRPEPEDRSDQLLASLQGLWRSTIDP NDSFRVSGAERINAYAGAETSVEYLSLHKPCAEAGDVGPFLFTWDNNSGTSLCYAIAR LTDTELALIYLPRGTELVYRREG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1081 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(226684..227853) /locus_tag="Silicibacter_244" /function="COG: Permeases of the drug/metabolite transporter (DMT) superfamily" /translation="MDRVFLCWLRPELYAPLSQRQAPIDATSRQAESRLPGRRQCWAP RSCRSGRRTIASLKGVQYFTSEGLSCRRNRCLFARMSDVSQTKAPATEPTSNPMRGVF WMLVTGLNFVAVTALVKYMGPRIPPAESAFLRYLLGLVFLIPMIRSIKAVEWTSQLHG LFALRGAVHALGVIMWFFAMTRIPLAEVTAMNYLSPVYVTLGAAIFMGEKLAFRRIAA VGVALLGVVVILRPGFREVSPGHLAMLITGFAFGLSYLLAKTMVGRTNPTVVVAMLSI WVTIGLAPFALANWVTPTLFELALLFGVACFATAGHYTMTLAFASAPLTVTQPVTFLQ LIWATLLGALAFGESVDVWVVVGGTMILGAVTFITWREAMVKRRAITPAPHATKS" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1080 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 227910..229547 /locus_tag="Silicibacter_245" /function="COG: ATPase components of ABC transporters with duplicated ATPase domains" /translation="MSSPSACVLLDGLRWSAADARPLFSDLTLHLQSGRMGLVGRNGS GKTTLLRLIAGDLPPEGGRVQVSGRLGWMRQEVASAAHLTVADLFGVAPALARLRRIE RGVATDTDLAEADWTLPARIEAALQRCGVSVAPEEPLAPLSGGQRTRVALAAQIFQAP DILLLDEPTNTLDAEGRAMVRRLLRDWRGLALVVSHDRAVLEEMDAIVELRAGGAQRY AGPYSQYRAERDMELAAAYQDLHEAEKTRKETMRRAQDATERKARRDSQGRAARASGS QPKVLLDKAKERAEASKGAGVRLREARRTEAEAALADARERIEVLEPIQMEIPATGLR NQTRLVALQHITAGYGPHTVLRDFSLEITGPERIAVMGPNGCGKTTLLSLILGHLEPH AGHITRPAEAALLDQHLSLLKSDETLLENYLRLNPGVGAQDAHAALARFRFRASEALW QAAALSSGQRLRAGLACTLARPTPPPLLVLDEPTNHLDFEGLEALEAALLGYDGALIV VSHDSAFLDRIALTRRLVLPSQRSGSGINSLSSPGGS" /product="probable ABC transporter, ATP-binding protein" /transl_table=11 /note=", ABC transporter related, ABC transporter, cbiO: cobalt transport protein ATP-binding subunit" /note="Hypothetical protein" CDS complement(229496..230437) /locus_tag="Silicibacter_246" /function="COG: Pirin-related protein" /translation="MSWNPTLEPMCPEAGNLDSIETLVVPRARDIGGFEVRRALPAPR RQMVGPFIFFDQMGPAEFLTGAGIDVRPHPHIGLGTVTYLYQGEFEHRDSLGTHQMIY PGEVNWMVAGNGVTHSERTSEATRKGQSSLFGIQTWIALPENKEDMAPVFEHHGKEAL PHLLGEGKEVRLILGTAWGETAPVTMHSETFYADVILEAGAKLPMPDNHEDRGLYITR GAVEIAGQTFGAGQMMVFRPGDAITVTAGPEGARLMALGGETMGGPRHIWWNFVASSK EKIEEAKQAWARGDFASNPRFQLPPGDDSEFIPLPER" /product="pirin domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO2601 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(230530..231159) /locus_tag="Silicibacter_247" /function="COG: Putative threonine efflux protein" /translation="MQPLPMTPDMLPILMAGFGLGFSLILAIGAQNAFVLRQGIRGQH VLPIVLTCALSDALLITAGVAGFGTLTSALPWFEPVMRIGGALFLTGYGLRSLRSAWT GGAALSTEGQGVQTALWPAVLTCLAFTWLNPHVYLDTVVLLGAISAQYTPAWVFGLGA VTASFVFFFTLGYGARLLAPIFARPRAWQVLDALIGVVMLALAVKLALM" /product="L-lysine exporter, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1079 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 231269..232189 /locus_tag="Silicibacter_248" /function="COG: Transcriptional regulator" /translation="MRYDPLQLAALSAVLDLGSFDAASAALGVTPSAISQRIKALEDR IGTPLVNRSSPCTGTETGLRIAKHAEDVALLERRLSRDLSLEGAETPARLKLAVNADS LATWFVEAMVAAGDVLFDLVIDDQDHSTDWLRRGVVSAAVSAEPRPVAGCDVHALGHL RYVATASPAYMARWFPGGVTPETASVAPCMVFNAKDRLQHRWLARHVAPGLTPPSHAL SSTQAFLDAAAAGLGWGMNPETLAEPHLASGALVELIPQSPLETPLYWHVSRIMAPAL VEITQAVRRAASANLHPPPKASNARAGRGG" /product="transcriptional regulator, LysR family" /transl_table=11 /note="identified by match to putative ortholog SPO1078 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 232210..233067 /locus_tag="Silicibacter_249" /function="COG: Protease subunit of ATP-dependent Clp proteases" /translation="MLSVPHLPKGSFAHSVWLHLVLPRAAVLAALWAMNQSLQLPIWL VYPAAVLDAGFLVWQLWRYHQAAEAHIRDTGAMAPSWGGYLLCLLALLSSATLWWDTV LIANMPPPEEQHSEQMRRAREALYQLTLSADGRTVQFEGEITYGLKARLAQIVENAPD LRVIHLGSPGGHVFEARGAAQVIMGAGLETTVSEACSSACTLLFMAGTRRHLDPQARL GFHGYGLSEWVHLPGYDIDAAQEKDRVFFLAQGMQPGFAARIFDRPPEEMWYPDHAEL RAAGVLTSP" /product="hypothetical protein" /transl_table=11 /note="Hypothetical protein" CDS complement(233306..234046) /locus_tag="Silicibacter_250" /function="COG: Uncharacterized conserved protein" /translation="MAGHSKWANIQHRKGRQDAARSKLFSKLSKEITVAAKMGDPDPE KNPRLRLAVKEAKSNSVPKDVIDRAIKKATGGDAENYDEIRYEGYGPNGVAVIVETMT DNKNRTASTVRSTFSKNGGNLGETGSVGFMFERKGEVTYPASVGDADTVMMAAIEAGA EDVESSEDGHVIFCADTDLNEVSNALEAELGESESTKLIWKPTTTTELDLEGMQKLMK LVDALEDDDDVQRVTTNFEASDEVMAQL" /product="conserved hypothetical protein TIGR01033" /transl_table=11 /note="identified by match to putative ortholog SPO1072 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 234297..234392 /locus_tag="Silicibacter_251" /translation="MAWIKGRAATYQGESVPEILGATHRASQIMP" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 234508..236283 /locus_tag="Silicibacter_252" /function="COG: Na+/H+ antiporter NhaD and related arsenite permeases" /translation="MTLDQTLLFGLFATVFGLLLWGRFRYDLVAFGALMVAVVLGLVK AEDAFAGFGHPATLVVALVLVVSAGLVKSGAVHLITRTLVDQSRALGAHIALMGSVGA VLSAFMNNVAALALLMPVDIQTARKAGRTPGQSLMPLSFATILGGMATLIGTPPNIII ASIRHDTLGEPFKMFDFAPVGLAAAAAGLAFVALVGWRLIPDRSGAAGATESQLAPYI AELTVPEDSDLIGQRLGSLDPEAEKADVAILGLIRGGQRRYGRAAGALLQAGDTIVLE ATPDALDEFRATLKLDFSDAAREEKLKAAGEGLELIEVVVPEYSRIAGRSAQGVGLAW RQSAVLLGIARQGERLTKHLRQTEVAPGDILLILCPRDRGAEVAEWLGCLPLAARGLS VTANDKTWWAIGLFAAAVLAASVGLVYLPVALGLVAIGYVLLKILPVAEIYDHVEWPV VVLLGSMIPLGQALETSGGTELLAHGLVELTTGLPAWAILTVLMVVTMTLSDVLNNTA TAIVAAPVGISMAQALNVSPDPFLMAVAVAASAAFLTPIGHKNNTLVLGPGGYKFGDY WRMGLPLEILVIAVSIPAILFFWPL" /product="trkA-C domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1076 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 236488..238161 /locus_tag="Silicibacter_253" /function="COG: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit" /translation="MAAAQRDNHADVIVIGAGLAGLVAANELADRGKRVILLEQEPAH FIGGQAHWSLGGLFMVDTPEQRRMGIRDSLDLAQRDWAGSAQFDRPEDQSPRQWAKAY LEFAAGDMRAWLHDLGLRWFPVVGWAERGDGRAEGHGNSVPRFHITWGTGPGVVAPFA QRVHAHVATGRIDARFRHQVSHIIQQGGHIKGVSGEVLADDQGPIGAQTNRHEVGEFE VYAPSLIVASGGIGGNLEMVRENWPTERLGPAPSRMVSGVPAHVDGRMLKVAQAAGGH IINGDRMWHYCEGLRNWDPIWPNHGIRILPGPSSLWFDAHGTRLPDPALPGFDTLGTL KAILASGQDYSWFILSQKIIQKEFALSGSEQNPDLTSGTWAEVLRARIFSGGKAPVPV EAFKKHGADFVVAETLSDLVRGMNEIADVPLDEAHIRAQIEARDAQVDNPFAKDRQIQ AIHAARNYRGDRLIRTAKPHRLLDRANGPLIAVRLSILTRKTLGGLHTTLESQMIGAD GAPLPGLFAVGEAAGFGGGGYHGYNALEGTFLGGCLFSGRQAGRSDQIA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1070 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 238193..238666 /locus_tag="Silicibacter_254" /function="COG: Uncharacterized protein conserved in bacteria" /gene="ybiA" /transl_table=11 /note=", ribofla_fusion: conserved hypothetical protein" /note="High confidence in function and specificity" /product="hypothetical protein" /translation="MTPPSPDTIYFYAQTDPYAEFSNFAPYGVCFEDIWWPTVEHYFQ AMKFHDAAYRTRIRRCQKPKDAKALGMTRKIPLRADWEEVKDDIMYAAVLCKFRTHGA PRQLLLGTGDAPLVENAPMDAYWGCGPDGLGLNKLGRILMRVRGELAEDAAALNR" /EC_number="3.5.4.25" CDS complement(238760..239224) /locus_tag="Silicibacter_255" /function="COG: Heat shock protein" /translation="MMTTRRAFIAAVLVAASAIVMGAQTRATEPATPPLTDTQWTLSE IEGKAPLEGRDLDLIFFEDGRFGTSAGCNRFMGEVEIEGDEITFPDKIAGTMMACPEG LAEQEEKLLSLLSEVTHYQIEPDALILMDSDGQALLRYSREVEEEGLVETSG" /product="hypothetical protein" /transl_table=11 /note=", Protein of unknown function DUF306, Domain of unknown function (306)" /note="Hypothetical protein" CDS complement(239342..241120) /locus_tag="Silicibacter_256" /function="COG: Na+/H+ antiporter NhaD and related arsenite permeases" /translation="MFLFQSGDTTSAIIALLIVLAMFVAFLRETYPTEVVAICGVSLM LITGVLPYAEALPVLANPAPWTIAAMFLIMGALVRTGALDAFTSVARKKAEVSPKMAI ALLMGFVVIASAFVSNTPVVVVMIPVFIQISRTLNVSPSKMLIPLSYAAVLGGTLTLI GTSTNLLVDGVARAQGLAPFSIFEVTPLGIVVVVWGLIYLRFIAPRLLPERDSMAMML SDRSKMKFFTEAVIPPDSNLIGREVTGVQLFKRPGVRLIDVIRGDDSLRRNLQGVELQ VGDRVVLRTQMTELLSLQRNKELKRVDQVSAVETKTVEVLITPGCRMVGRSLGAMRLR RRYGVYVLAVHRRNQNIGVQLDDLVVRVGDTLLLEGAPGDIQRLAAETDMADVSQPTQ RAYRRSHAPVAVAAMVGIVIAAAFGLAPILMLSILAVALVLATRCIDADEAFSFVDGR LLALIFSMLAIGAALESSGAVELIVNAISPALVDLPPFFLVWAVYLLTSVLTELVSNN AVAVVVTPIAVGLAQAMGLDPRPLVIAVMIAASASFATPIGYQTNMLVYGPGGYKFSD FLRVGIPLNLSMGLLASAVIPLLWPL" /product="trkA domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO2952 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(241187..241315) /locus_tag="Silicibacter_257" /translation="MKGLRFRGVMRGSAHPPVTQVPISPHLPNFADTIACCTAFDR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 241402..242295 /locus_tag="Silicibacter_258" /function="COG: Beta-lactamase class C and other penicillin binding proteins" /gene="adP" /transl_table=11 /note=", Beta-lactamase precursor (EC 3.5.2.6) (Cephalosporinase)., Beta-lactamase, Beta-lactamase" /note="High confidence in function and specificity" /product="alkaline D-peptidase" /translation="MTPDRPVFTHRLSASGSDSPRADAGEIFPYWSFTKTVIAICALR MVQDGRLDLDAPLAGFDFSLRHLLDHTAGLPDYFTLPAYGAAVAQNEEPWSAEALRAA TMAQGRLFAPGTGWSYSNLGFMVARDLLEEVAGQSFSDLLQQLICAPLELRSITLAQT RRDFERVHWAAAKRYHPGWVYHGCLTGTAADAARLLQGLFEGTLLDAEMLREMRKSHP LGGVIEGRPWTECGYALGLMSGRAGEAGRMIGHSGAGPFSVNAVYHFPDLSPPVTVAS FTDGTLEGVAEHAAVAAALSA" /EC_number="3.4.16.4" CDS 242328..242465 /locus_tag="Silicibacter_259" /translation="MAHEDVPPLGIARANLLAVTFHFEDRKAAPADPRHSRCFGPVAA K" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(242847..244157) /locus_tag="Silicibacter_260" /function="COG: Glycine/D-amino acid oxidases (deaminating)" /translation="MTLNLLHANDRPGKYPQSWYAATATPGVHYPSLTGGVRADVCIV GAGYTGLSAALHLAEAGRSVVLLDAQRVGFGASGRNGGQLGSGQRQDQEVLEKMVGAE DAAHLWRLGEEAKDLVKDLISKHQIDCHLKPGVAWTAERSGDVTHLHDYGRHLEDRYG YDQIEFLDQDACHAMCPSPAYKGGILDHGAGHLHPLNFALGLARAAAEAGAQIYERSE VFAIEDGPQVEVRTGEGTVRADHVILACNGYLGGLNEQVATRVMPINNFVAATEPLGD DAAQVLARDVAVADSKFVVNYFRLSHDKRLLFGGGESYGYRFPSDIAAKVRKPMTEIF PHLHDVKIDYAWGGTLGITMKRLPYLARVSPRILSASGYSGHGVGTATHAGRLLAEAI AGQSEGFNTMARIPTTPFPGGPRMRSPLLVLAMTWFSLRDRLGI" /product="oxidoreductase, FAD-binding" /transl_table=11 /note="identified by match to putative ortholog SPOA0209 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(244268..245635) /locus_tag="Silicibacter_261" /function="COG: Glutamine synthetase" /translation="MPTPTRWQEKLPEAATTYLEGRRLDEVECVISDLPGIARGKAVP ASKFAKQDYFYLPDSIFYQTITGDWAEAADEDGWIEKDMLLRPDMSTATAAPWTGDWT LQVIHDAYDRDGNPIPFSPRNVLKHVVSLYEAQGWKPVVAPEMEFYLVARNVDPARDI QPMMGRSGRPAAARQAYSMTAVDEFGPVIDDIYDFAEAQGFEIDGITQEGGAGQLEIN LRHGSPVKLADEVFYFKRLIREAALRHDCFATFMAKPIADEPGSAMHIHHSVIDIESG ENIFSGPQGGETDAFYHFIGGLQNHLPAGLAVMAPYVNSYRRYVKNHAAPINLEWARD NRTTGIRVPLSSSASRRVENRIAGMDCNPYLGIAVSLACGYLGLMEERRPTRQFKGDA YEGEGDFPQVMGQALDLFDESKALHEVLGPEFARVYSTVKRAEYEEFLQVISPWEREH LLLNV" /product="glutamine synthetase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1300 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(245635..246315) /locus_tag="Silicibacter_262" /function="COG: GMP synthase - Glutamine amidotransferase domain" /translation="MKIGILQTGHAPDELKPTSGNYDAMFRKLLAGHGFSFDTYPVLD GVFPEGAEAADGWLITGSKHGAYEDHDWIPPLEDLIRQIHARKMPLVGICFGHQIIAQ ALGGKVEKFSGGWSVGHTQYRLHGAPVELNAWHQDQVVTRPAEARVIGESDFCANAFL AYGDHIWTSQPHPEFENTFVDGLLRTRGKGVVPDAQLNAAEASLDRPTDSTQIAQEIA DFFKKVRT" /product="glutamine amidotransferase, class I" /transl_table=11 /note="identified by match to putative ortholog SPO1301 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(246371..247690) /locus_tag="Silicibacter_263" /function="COG: Glutamine synthetase" /translation="MDLSALKTIRIAACDLNGQMRGKRLPAGMAAKLGEGSARMPFSV LNVDIWGRDIEDSPLVFETGDADGILLPTKRGAVPMPWLATPSALVPMKMVHEDGRPF LGDPRQVLAHVLDRYAEKGWQVAAATELEFILVDDAGTEPLPPIDPLTGRALDQQSVL SIAELDAYDDFFTDLYDGAEAMGIPAQDAISEAGLGQFEINLTHQDAMRAADDTWLFK ALVKGVARKHGFAATFMAKPYAEESGNGMHVHFSVVDKDGVNIFDNGGPEGTPALHAA VAGCINAMRDSSLVFAPHGNSYDRLVPGAHAPTSAAWAYENRTAAIRIPGGSPKARRI EHRVSGGDINPYLMLATVLGAALIGMEDGATPPPPSEGNIYDIDGLPQLAGSWAEAID LFENSPLIARILPPMAIRNLVMTKRQELKGFAERPPESHWLSWLEAV" /product="glutamine synthetase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1302 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(247810..248544) /locus_tag="Silicibacter_264" /function="COG: ABC-type multidrug transport system, ATPase component" /translation="MTAHSARPRIAILTSHGQPSAPPPPEIHLAAVAAAVQDHLPDWE VRSATLSSKGFLEAAMREDGAVIYPFFMARGWFTGKVLPGRLKGWRYRMATPFGLDPA LPALTVAAIRSALHARGWKVAESEVLLAAHGSARGPKAAEAAEAFASTLRAQMPELRL TTGFVEETPFVAEAARNCGAQSLCLPFFAQTGAHVREDIPAALAEAGFEGDLLPVLGA LPGVAKLMADAIERAAETELSSPPAA" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO2745 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" tRNA 248885..248955 /locus_tag="Silicibacter_58" /gene="Silicibacter_58" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS complement(249259..251862) /locus_tag="Silicibacter_265" /function="COG: RTX toxins and related Ca2+-binding proteins" /translation="MPTIYDSFADTPGSAVRLDVGSPYEVRLTQAELDAAATFGNPEY DYFEFYADPFTTYTVQVIAANDAIDQSLWLPSPTWPGYNTEFGFSAPDGTMVTLEDGY SVRNWDPGDRLITTLYDGGLVRMAVRFDGWLQEYRTGEDLSDLPGSDRSFFIRIVEGD VAGTQPQIDTVGTGPDALEVSPEDASGIITGELEDLEGTPDVDEYLFTLRAGFHYDVV VRGATGAQSGESPGVFRVTVSEENGASSWTLESDVDRMSTGDVEQTITSVRIGDGFGS LLLEPGEEIDVRVSIQSIYDPNREVSPYQTGGYSVGGYEIEILPTDDDHGNNRLTPST ISVGGWQSGTLNPYYEISAAEPFGDRDWMEIVGGVEEGRYYVASFDYSDGRPFSMFAS FHNSVSTETVRAPDYAIWQPNYTGAAWLEVDSNFIGSADWRVSLGSYETLELGNRSDE RLTGTAGENFLDGRGGADLIVGRGGADQLIGNGGNDTIKGGGGHDILSGGAGKDVLKG NGGNDALNGGGGRDKLIGGRGNDTMSGGDVRDVLKGGGGNDVLDGGEGRDKLIGGSGN DTITTGFDGDVVRAGSGIDTIIIAGPEGDRDLRIRGTMDDGDILDLSALNIDSYFVED SFAGGGASSVRTRGDGLGYDIDFDGDGIGDRSIFFDSSEDADLVDLEGVAVRTPATYY EYLAETLTPLEWTPTRERYVLDSYGTFQYDLISGTSGADLISNDGRADNYLYRGQVRA GAGDDIIDMQLHSSLTYYGGTGDDYFVWQPPVDPNYALWIRLNDFRQYGEEDYIVVRS DIWGEGVSIDNITFDRMRSDGDYLEAHIVGTNGLEGTISVTQPFRSSDPLRNNDATSA DFLNVDAFIFV" /product="Hemolysin, plasmid." /transl_table=11 /note=", Serralysin-like metalloprotease, C-terminal" /note="Conserved hypothetical protein" CDS 252222..252689 /locus_tag="Silicibacter_266" /translation="MKRFALTTAAISALMAAPAMADLNTAAAQTFTEMKEAYPAIDRK IFEQVDVNKDGVADMAEVDAAEQSGVLNDDMSAAEATGTYDPSPYGVEEAGALTFAEL KDAYPSLTKKVFEEVDANKDGVADMAEIDEAELSDVLEPGIGNTAEGQSYNQG" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(252925..254601) /locus_tag="Silicibacter_267" /translation="MYNTRIARITGKVSIPCVLLGLLCFAASLTPSLIPRGPMAQGIL GGLVMAIGYLIGHIVGLLWRAADLPRLPRRAERGLTQVIAIVLAGVFLWVLGSSLRWQ NDIRAKMGMEEADALQLATILVIALATFTLAFALGRLVAALFRLIRSWFYRIMPPRRA NVLGVVAVVLILFLGTRDGIIDRLVTGLDESYEAAQELFDKAPPPPAAPHLTGSAASL VDWASIGKPGRDFISSGPTAEDISAFTGQPARDPIRVYVGRASAETPEARAELALAEL IRQDAFARDVLIMTSPTGTGWMDPGSHDPVEYMHGGNIATVAVQYSYLQSPLALILET RTGLEQATALQDAVHGYWKTLPADARPRLYAHGLSLGAWSSMHATNMFRLLNDPIDGA FWAGPPFPSTFWNYVQNRRNPGTPWVLPEIGDGSLVRYASHTADASEAAAEWGEMRIV FLQYSSDPVVFYDPRSLWRAPPWMRDPPAADMTEHFIFMPVVTQFQLALDIALSFGAP PGHGHAYYARDYIGPWLQVTAPRDWSPEDTARLIAHCNTGFQQGCANARR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 254841..255932 /locus_tag="Silicibacter_268" /function="COG: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /translation="MKTFLPAVARSISVILCLGGPFGVIPAPLAAQSEAQSEAQSETQ SEIEVAEFPYVTLRNRTGSDDPAEFYAGERSDPKAGRCRVEELDLGVLAPLAGVAPNF LREELLRVQAIEEAPTGAILDQLEATAGAQGPALYVHGYYISFEKGCRRAALLQQNAD LEGRLLWFSWPSDGAAAYYTHDEVDLYWSLPDLADTIIELHERFGPGEVAVMGHSLGA RGVVLALAEVANRRPDMQLGQVVLLAPDMDFGIFERILPRIRPIAENLTIYVTSGDRP LALSAQVHGYPRLGEAGNPVSRLTGVEVIDLSDLPSEGPTGHLYHIYSQIVGADLSRL LRSGEGASERPGLVAQSKNLWRLRPEKRE" /product="hypothetical protein" /transl_table=11 /note=", Protein of unknown function DUF900, Protein of unknown function (DUF900)" /note="Hypothetical protein" CDS complement(255985..256482) /locus_tag="Silicibacter_269" /translation="MSDGTTSGWQRFDKAAFGIIYGAIMVLSIMLAQGGHPTPPLETA IVLFGSVLAITLAKAFAELLSHALDTRERMTRGSWRAAWHHSTPTLAVANVPTALFLA AWQGWIGEETALFLSQVMCVTLLALLGGRAGWVLDRRLLPALLGAGFAGGVGLLLANL KHIIH" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(256712..257572) /locus_tag="Silicibacter_270" /translation="MFRSVAIKAIFSIAAFASSVSALEFRITASGLDKDRHSYELELM ELALSKADGDHTLTLVDPGNSNQTRLLAQLAAGSEEFDVIFSGVSKERYESLTIVPIP LQRGLLGHRILISNEDSLPALQTVETFEDLKKIRIGSGTGWPDTEILESAGLNVSAAA YENLFTMTDKGRVQGYARGVAEPFAEVTKRSESHPNLRVDSSLMIVYPFDTFFFTGPE DQERADIILQGLERAYEDGSFMAHFNSHPNIQSVFEQAQIDNRLRFDIPNPLLPEEIS NLPDHLWHGR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 257998..259800 /locus_tag="Silicibacter_271" /translation="MARGAVQNTASNEERETSRRIGVLKALWPFMRPYRGLIFAALAA LTLTAGVSLSLPLAVRRVVDNFRITDAALLNQYFTAAMIMAALLALGTGIRYALVTKL GERVVADIRKAVFDRIIGMSPAFFERIMTGEVLSRITTDTTLIQSVLGSSASIALRNL LIFLGGLVLMLLTSAKLTAMVLLIVPAVIVPILFLGRRLRVISRENQDWIAASSGNAG ESLGAVQTVQAFTHEDLSRAHFSEMTETSYEVSKRRIQTRALLTVIVIFLVFSGVVGV LWIGANDVRFGSMSEGALVQFVIYAVMVAGSVAALSEIWSELQRAAGATERLVELLQA EDSVRDPEVAQVLPEPVRGELTFDTVSFTYPSRPDVSALDQVSLTIAPGETVAFVGPS GAGKTTIIQMIQRFYDPQSGEVRLDGVPLQALARDDFRRHIALVPQDPVIFAATARDN IRFGRPDASDAEVEAAAKAAAAHDFIMKLPEGYDAYVGERGVMLSGGQKQRIAIARAI LRDAPVLLLDEATSALDAESERLVQAAFEDLSRDRTTIVVAHRLATVKKADRIVVMDQ GRIVAVGTHESLVAEGGLYARLARLQFTDGQAQG" /product="ABC transporter ATP-binding protein" /transl_table=11 /note="Family membership" CDS 260110..261996 /locus_tag="Silicibacter_272" /function="COG: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /translation="MAFATVADVAAIEQECTWQERDIPRTLYGLLSRTAERFPNNPAV SYQIFSGPTDKAETLTWRELKAKTCQAANLFRSLGIGEKDVVAYVLPNSNETLITLLG GAVAGIVNPINPLLEPEQIASILRETGAKVVVTLKGFPKTDVPQKVAEAVAHAPNVKT VLEVDLNRYLTPPKSWIVPLIRPKVNKAHAHADYKNFNRELAKQPTELAFADSEGDRV ACYFHTGGTTGMPKVAQHTYEGLIYNGWLGHTLLFSEEDNIMCPLPLFHVFACHVIVM AAVSSGAHVVFPTPQGYRGEGVFDNFWKLCERWKITFIITVPTAISAKMQRPVNADVS TVKTAFSGSAPLPLELFRRFEEATGITIVEGYGLTEATCLVSCNPVEGEKKVGSIGIP FPYCDIKIVKGTPEGLQECGADEIGEICVQTPGVFAGNTYTETDKNIDLYYQDTHLRT GDLGRVDPDGYLWITGRAKDLIIRGGHNIDPADIEEALLGHDAVAFAGAIGQPDAHSG ELPCAFVELVDGASATEQELLDYCKRHVRERAAIPKHMTILPELPKTAVGKIFKPDLR RHAITRIYDGALKDAGLAARVTSVSDDKKRGLVAQVSLNGSDTAAVGEVLSVYTRPWE EAKG" /product="AMP-binding enzyme" /transl_table=11 /note="identified by match to putative ortholog SPO3003 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 262115..263062 /locus_tag="Silicibacter_273" /function="COG: Esterase/lipase" /translation="MSETVNVMDYEKLIDEETWNFIRETGRHYPDDTVDLTIDDQRAV YNKMAAAFRKPRAEVVDVTERSVGRVLVRIYEAGDPTRTVMYCHGGGFVVGDLNSHDD VCSEICEQTGYRVVSVDYRLAPEHKHPAQFEDAWTVLDWICETYPGGVVLAGDSAGAM LSACVAHHARGRHEGVLGQVLIYPGLGGDHALPSYREHAQAPMLTLEDVKYYADVRAD GTPVENDPTYAPLQDDDFAGLPPTVMFSADCDPLRDDCLVYRDAIHAAGGLAEWINEA GLVHGYLRARHSVGRARDGFERIVLAIEGLGQEIWPYDD" /product="lipase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3002 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(263112..263672) /locus_tag="Silicibacter_274" /translation="MKYFLALLAMAAATPALADSYCDDLWFTRNAIMDRAGYCFGSSL GKHVFDNGDCIGTSVTLSEMDATRVAKLKAQEREAGCRVDTSRSRLDVLDLRYRQRLV DLPVTDGLESTCIGWRGDPLPLRAGHGLNTDVIGQVLPGDTLNYGHYPVGGWSYVTVH DSDWHLKSAGWYRVDAYPQRCAQFAG" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3001 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(263716..264321) /locus_tag="Silicibacter_275" /function="COG: Uncharacterized proteins of the AP superfamily" /translation="MCFPKCARPAAPPGAVAHSFWSEFFNRSPFDYVRDIEYDEPESK TINHGRFHSMTGYGHDNQMTPSDVDLFATLTNLCGRFDLDYGMLHTCTLDSMGHRFFH ESAEMDKACFVMDEMLAPFIPRWRAMGYEVIVTADHGQDERGHHGGRHPLQQETALYY FGDADGPAENDVIDQLQLAPTILSRLGAPLAETMKAEAFLR" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3000 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(264266..264553) /locus_tag="Silicibacter_276" /function="COG: Uncharacterized proteins of the AP superfamily" /translation="MDRKLLLIILDGVPHRNFRRLFGNLEGWVASGDARVWKHRAVLP SISASCYASIHTGVTPQEHGCTGNGNVFRLSHDDVFSQVRKAGGTTGGGRA" /product="hypothetical protein" /transl_table=11 /note="Hypothetical protein" CDS complement(264736..266373) /locus_tag="Silicibacter_277" /function="COG: ATPase components of various ABC-type transport systems, contain duplicated ATPase" /translation="MSEPLLKVRDLKIGATVYPPGEKPHDIEIVHGVSFDLMPGKVLG LIGESGAGKSTIGLSSMAYGRGGVKITGGEVWVNGRDILKSKLSDIRKLRGGEVTYVS QSAAASFNPAKTIMEQVIEASVEQGKFSRRVAEDRARALFAKLGLPDPDNIGARYPHQ VSGGQLQRCMTALALCPEPDLVVFDEPTTALDVTTQIDVLMAIKEAIRDTGVAALYIT HDLAVVAQVSDDIMVLRHGNTVEYGSVDQIINNPQEEYTQALVSVRSIEHEEKAPTEE PILSVRNITARYKGTKFDVLHNVNVDLYPGQTLAVVGESGSGKSTLARVITGLLPPRE GEIYFNGRTLTPDFNNRSREDLRELQMIYQMADVAMNPRQTVGTIIGRPLEFYFGLKG AEKRKRIIELLDEIELGEGFIDRYPAELSGGQKQRVCIARALAAKPKMIICDEVTSAL DPLVADGILKLLLNLQKIEDVAFLFITHDLATVRAISDNIAVMYKGKVQRYGGKTQVL SPPFDDYTDLLLSSVPEMKLGWLEEVIANRKMESAGN" /product="peptide/nickel/opine uptake family ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO2998 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(266370..267185) /locus_tag="Silicibacter_278" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /translation="MKNIPVSALIGLFFTALYFLGALFAPLLAPYGMAEVVGDVWEPS SADYWLGTDNIGRDLLSRMIYGGRTTIFIATMATLISFTTGSILGIFAAVSGGWIDQT LSRFVDLIMSIPTLIFALVVLSVTPVTVPMLILVMGLLDSTRVFRLARAVAVDIEVMD FVEAARLRGEKTAWIIFREILPNALSPLVAEMGLRFIFMVLFVSTLSFLGLGVQPPEA DWGGIVKENKDGIVYGVPAALIPAFAIATLAISVNLVADWILNRTTSLKGGRG" /product="peptide/nickel/opine uptake family ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO2997 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(267182..268138) /locus_tag="Silicibacter_279" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /translation="MNPVIKLLAQRIALSLFLLLMISALIFAGTMILPGDVAQSILGQ SATPEALANLRAELGLNEPALTRYFDWLFGALQGDLGTALTSGQDITSAIGSRLSNTL FLAFWAAVIAVPLAIFLGLLAVRYKDRWPDKLISGVTLASISIPEFLIGYVLMYLIAV KLRWFPSVAMINDGMNLWQKLNSIALPVAVLTLVVLAHMMRMTRAAILNVMQSAYIET AELKGLSTFKVIWRHAFPNSIAPIVNVVMLNLAYLVVGVVVIEVVFVYPGMGQYLVDH VSKRDVPVVQACGLIFATVYIGLNMVADIVSILSNPRLRHPK" /product="peptide/nickel/opine uptake family ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO2996 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(268140..269723) /locus_tag="Silicibacter_280" /function="COG: ABC-type oligopeptide transport system, periplasmic component" /translation="MNDYLKHLAQEAALGRMGRREFLGRAAALGVTALGANSLLASAA KAAGAQKGGTLRVGLQGGSTTDSLDPALATNQVALSVIRLWGEPLVELGEEGGLVGAV AESFEASADAKTWTFKLRSGLTFSNGQPVTAADVVATMERHSGEDTKSGALGIMRSIS NVKADGDTVVFELEDANADLPYLLTDYHLVIQPNGGKDDPAAAIGTGPYVLKAVDMGV RFVAEKNPNYWGDLGNAQTIEYVVINDNTARVAALQAGQVDMIDRVPPRTAKLVDRAP NISVHSTAGPGHYVFIAHCDTDPFANNDVRLALKYGINRQEMVDKILNGFGSVGNDSP INASYPLFTQLEQREYDPEKAKFHMEKSGYDGPILLRTSDNSFPGAPDAAALFQQSLA AAGINLEIKREPNDGYWSEVWNKQPFCTSYWGGRPTQDSMFSTAYLSTADWNDTRFKN EQFDQTLLAARGELDEAKRTQMYADMSTMVRDEGGLICPMFNDFVDATSDRLDGWKDG VKGHALMNGYAPLKMWVKA" /product="peptide/nickel/opine uptake family ABC transporter, periplasmic substrate-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO2995 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(269912..270382) /locus_tag="Silicibacter_281" /gene="dtd" /translation="MRALLQRVSAASVTVDNAVIGEIGPGLLVFVCAMRGDSEAEATQ LVQKIARLRIFRDDAGKMNRSVSDTSGAVLVVSQFTLGADTRSGTRPGFSKAAAPDEG MRLYHCFCAKMRETGLTVQTGEFGADMKVSLVNDGPVTLWLDTDDRRNTSAGSG" /product="D-tyrosyl-tRNA(Tyr) deacylase" /transl_table=11 /EC_number="3.1.-.-" /note="identified by match to putative ortholog SPO2992 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(270659..271756) /locus_tag="Silicibacter_282" /translation="MTPKDAEETHRFPCEQCGADYRFAPAEGGLVCDHCGHKKELIES PWGGGALKELDFLQALREQLPAAEMEVTRVSSCPNCAAQVEFDPAVHALECPFCATPV VADTGENRHIKPKGVLPFQFDERAAHQAMEDWLGKLWFAPNGLKEYARKGRKMDGIYV PYWTYDAQTHSQYTGQRGTEYTVSRTVMVDGKPQVRSEIRVRWSNVRGRVQRFFDDVL VLASKSLPRKYTEGLEPWDLSQLAPYQPKYLAGFRAEAYTIDLEAGFADARQKMDRII ERDIKFDIGGDRQRISSVDTDVSAVTFKHVLLPVWMAAYKYRGQSYRFVVNGQSGRVQ GERPFSAWKIAGAVVVGLILAAGVAYLASQS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2990 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(271930..273120) /locus_tag="Silicibacter_283" /function="COG: Putative virion core protein (lumpy skin disease virus)" /translation="MGIFDFLKGEFIDVIHWTDDTRDTMVMRFEREGHAIKYGAKLTV REGQAAVFVHEGQLADVFTPGLYMLETNNMPVLTTLQHWDHGFQSPFKSEIYFVATTR FNDLKWGTKNPIMCRDPEFGPVRLRAFGTYSVRVVDPARFLTEIVGTDGEFTMDEISY QIRNIIVQEFSRAIAASGIPVLDMAANTADLGKLVAAEIGPVVAEYGLAIPELYVENI SLPPAVEQAMDKRTQMGIIGDLGRYTQFKAAEAMEAAAKTPNSGMGAGLGMGMGMAMA QQMGHAMQGGATPQAAGQPTGPWGARPAPAAPQPAAQAAPMAPPPPPVEHVWHIAENG QTSGPYSKARMGRMAQEGQLTRDTHVWTPGQDGWMRAGDVTELAQLFTILPPPPPPPP PAGG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2988 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(273298..274545) /locus_tag="Silicibacter_284" /function="COG: Cytochrome P450" /gene="cypA" /transl_table=11 /note=", [EC:1.14.14.1] , Cytochrome P450" /note="High confidence in function and specificity" /product="putative cytochrome P450" /translation="MRHITKPPLPRPETSAKTDFMKTLTQSPTDPDFVQNPYPFYDAA RAAGKLGYWEEYKMMAAFGHDVVHMLLRDRRFGREIPAEMATEGPAHLAPFLQVEAHS LLDAEPPRHTRLRKLVLRAFTSREIKALAPGLETLCHELINAFPKDAPFDLLSSYCTQ VPVIAICRLLGVPEAMAPQLLDWSHKMVAMYQASKTTETEHAAAQASAEFIAFLTDYV DERRKTPGEDLITRLIQAEEDGESLSTDELIGTCILLLNAGHEATVHSLGNGVKTMLE QGWSSEWLQPDGISGLVEEILRYDPPLHMFTRYAYEEIEIMGHRFRRGDQVALMLAAA NRDPEALERADQFDPTRPPKVNKSFGGGLHFCVGAPLARMEMEIALPILFERCPELKL AEPPQYSNTYHFHGLTRLWVQTR" /EC_number="1.14.14.1" CDS 274545..276296 /locus_tag="Silicibacter_285" /function="COG: Signal transduction histidine kinase regulating C4-dicarboxylate transport system" /translation="MLNPRHPRLALVASVVLFIVVLSAVVWSSAYRQALTALAERSAS DLALASDRVSTQLQIFREQAVLVVEHPALQALETREGPARATALLRRIADKSGALDVF YADDSGRVLAAAEGVAGSNVSGRRYFRRAMQGAMGTEPMVLPESKRRAYFFAAPDFGP DGRVRGTLVVVADIELVEQTWRGTLPPVYFTIEDGRVFISNRFELLFWRLDDDKTGLM TADGGDLPLEVKKVGEHEIWQQRWSPYLPDEALHLGIGLPAIGMRGEILVDVTPAQRI AALQTMAMAAVCLAFGTILFWLAERRRTLAKANAELEERVETRTRALSDTNLQLRREV RERKEAEAALKQAQAELVQADKLSALGQMSAGISHELNQPLMAIQQFAENGQAFLERG KSERAGENLTRIAQMSARMARIIKNLRAFARNESEPVGRVDLVQVIEAAVELTETRLR DHDVTLDWQRPEAQSVWVRGGEVRLTQVFVNLINNAVDAMMGQEERRVRIVINDGARL TVGVRDIGPGLKQPEKVFEPFYSTKAVGSSEGMGLGLSISYGLVQSFGGNIRGTNTEH GALFTVELDYWKEETAA" /product="C4-dicarboxylate transport sensor protein" /transl_table=11 /EC_number="2.7.3.-" /note="identified by match to putative ortholog SPO2630 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 276293..277522 /locus_tag="Silicibacter_286" /function="COG: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains" /translation="MTRKVLLVDDDAAVREALGQTLELADLNAVTAGSFVAAKDHITP DFEGVILSDMRMPGRDGFHLLSYAQEVDAELPVVLLTGEGDIPMAVRAMSEGAFDFLE KPCEAATLMTVLERALKTRALVLENRRLQRQLERGDPAARMIFGVSPQIQELRARVRA AAATDAEVLVSGAPGSGIPKIAEVVHLMSRRGQGAFVKRPAAGLTPQTFEELCQTAEG GSLFLDELSAMPQETQYAVLARLEQGGGARIIGGSTVDLSERVAGGSFNAELYYRLDV MRVRVPSLAERREDIPVLFRHYVSQAAEQAGIDAPEISPDTLASLMAQDWPGNARSLM SAAMRFVLGMPEEVAQATDLGLAEQMAQVERSLLIAALGRQNGKAAAAAEALKLPRKT FYDKLARYGIRPEDYRR" /product="C4-dicarboxylate transport transcriptional regulatory protein" /transl_table=11 /note="identified by match to putative ortholog SPO2629 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 277769..278773 /locus_tag="Silicibacter_287" /function="COG: TRAP-type C4-dicarboxylate transport system, periplasmic component" /translation="MKFLTAAATALALSVTAGVAQADACDDGEIVVKFSHVTNTDKHP KGIAASLLEKRVNEEMNGTMCMVVYPNSTLYDDNKVLEAMLQGDVQLAAPSLSKFEKF TKQFRLFDLPFMFKNIDAVDAFQASENGQAMLDSMQRRGLQGLGYWHNGMKQMSANKP LVMPEDANGLKFRVQSSDVLVAQMEAIGGSPQKMAFSEVYGALQQGVVDGQENTWSNI YGKKFFEVQDGITETNHGVLDYLVVASVDWLDSLEPEVRDQFMTIMTEVTATRNAEST RVNNEAKEAIVAAGGEVRQLTAEQRQAWVDVMKPVWEQFSGDVGQDMIDAAQSINAGF " /product="TRAP transporter solute receptor, DctP family" /transl_table=11 /note="identified by match to putative ortholog SPO2628 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 278903..279580 /locus_tag="Silicibacter_288" /function="COG: TRAP-type C4-dicarboxylate transport system, small permease component" /translation="MSGARTGPSGFIHTLEESLIALILGAMTLLTFANVIARYVFNSN ILWALEVTVFLFAWLVLLGAAYAVKVHAHLGVDAIINMLPQGARRILGLIAAAACIIF SLLMLKGAYDYWAVFADLPPTSGRWFPTGFDVKARSQSFYEVQDVPMIGALRFLEDLI NYGDSYEKMPKVVPYLVLPLSMLLLVIRFVQAAVQILRGQTDRLVASHEVEDELEAVR AQRGEHD" /product="TRAP transporter, DctQ subunit" /transl_table=11 /note="identified by match to putative ortholog SPO2627 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 279580..280956 /locus_tag="Silicibacter_289" /function="COG: TRAP-type C4-dicarboxylate transport system, large permease component" /translation="MEVVLLFTLVIGLLLIGVPIAVSLGLSSTIFLLIYSDSSLGSVA GTLFQAFEGHFTLLAIPFFILASSFMTTGGVARRIIRFSIACVGHLPGGLAIAGVFAC MLFAALSGSSPATVVAIGTIVIAGMRQVGYSKEFAAGVICNAGTLGILIPPSIVMVVY AAAVEVSVGRMFLAGVIPGLMAGIMLMVTIYVMAKVKNLPKGEWNGWGEVFASAREAG WGLFLIVIILGGIYGGIFTPTEAAAVAAVYAFFIACFVYKDMGPLSNGEGQPKDSLLK KPYALITAFFHSDTKHTLFEAGKLTVTLLFVIANALILKHVLTDEQVPQHIANAMLSA GFGPVMFLIVVNVILLIGGQFMEPSGLLVIVAPLVFPIAIELGIDPIHLGIIMVVNME IGMITPPVGLNLFVTSGVAGMPMMAVVKAALPFLAVLFVFLIMVTYIPAISTFLPNMI MGPEIITN" /product="TRAP transporter, DctM subunit" /transl_table=11 /note="identified by match to putative ortholog SPO2626 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 281132..281458 /locus_tag="Silicibacter_290" /translation="MAGRFRQAACLRRLAVPSRAPRLAGGAASGCARARQQQSRGFDR AKERGANAGEDEAHHFGTQFARAQFDCSQLVNIQRGGFIQVHCFTLGCFIDGADLDHR CGRDIA" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(281216..281389) /locus_tag="Silicibacter_291" /translation="MDLNETTPLDIDELRAIELRARKLRAEMMSLILSSIGTALLRAI KAPALLLSRPRTA" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(281624..283105) /locus_tag="Silicibacter_292" /function="COG: Superfamily II DNA and RNA helicases" /gene="rhlE" /translation="MTKFTDLNLNPKVLKAIEEAGYESPTPIQAGAIPAALEGRDVLG IAQTGTGKTASFTLPMITRLARGRARARMPRSLVLCPTRELAAQVAENFDTYAKHVKL TKALLIGGVSFKEQDAAIDRGVDVLIATPGRLLDHFERGKLLLTGIEIMVVDEADRML DMGFIPDIERIFSLTPFTRQTLFFSATMAPEIERITNTFLSGPERVEIARQATTSENI EQAVVMFKASRKDREGSEKRRVLRELINQEGEAVQNAIIFCNRKTDVDIVAKSLKKYG YDAAPIHGDLDQSQRTKTLDGFRDGTLKILVASDVAARGLDVPSVSHVFNFDVPGHAE DYVHRIGRTGRAGRDGKAITLCSPRDEKALDAVEGLVQKEITRLENPVKPTPRKTATK DEDAGDKPKPARRSRSKAASAKTDATPTPEAANDAAPQVEAPQQQPQEPKETRAEQPS AGAKSGKSRGRGRRDDRRDDKVVGMGDHMPSFIALSFDERRAS" /product="ATP-dependent RNA helicase RhlE" /transl_table=11 /note="identified by match to putative ortholog SPO1443 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(283300..284238) /locus_tag="Silicibacter_293" /translation="MTVKWGLVATLKAEAEAVLNFAAWHLEQGAHRLFLYLDAACPDA LPHLQDHPRIRVIETTEAHWLKRRGRVPEKHQVRQSLNATRAYRRQARDLDWLIHIDV DEFLWSPDPLAPQLEALDPDVLCARVRPLEHLAGSADRFKSRIPSGSDASQISTRIYP RFGGYLKGGFVSHVQGKLFVRTGLEEVDLRIHNVFVEGVENPCATELTNIDLCHHHAS DWAQWIAQYRYRLNKGSYRADLRPAQPRSAGGTTLHELLSLLEAEEGESGLRAFFDET CADSPELRQTLASEGLLRQRALPLVAIRQKHFPHFS" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1444 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(284311..285999) /locus_tag="Silicibacter_294" /function="COG: Translation elongation factors (GTPases)" /translation="MRPVKHIAPVQHGFSLPLSRFVAKASLMLDTAHNRPDLPPEIAR RRTFAIISHPDAGKTTLTEKFLLYGGAIQMAGQVRAKGEARRTRSDFMQMEKDRGISV SASAMSFDYGDFRYNLVDTPGHSDFSEDTYRTLTAVDAAVMVIDGAKGVESQTQKLFE VCRLRDLPILTFCNKMDRESRDTFDIIDEIQENLAIDVTPASWPIGVGRDFIGCYDLL RDRLELMDRADRNKVAESISINGLDDPKLAEHVPEHLLEKLLEEVEMARELLPTLDPQ AVLEGHMTPIWFGSAINSFGVRELMDGIGQYGPVPQIQSAEPRQIAPEEKKVAGFVFK VQANMDPKHRDRVAFVRLASGHFKRGMKLTHVRSKKPMAISNPVLFLASDRELAEEAW GGDIIGIPNHGQLRIGDTLTEGEALRVTGIPSFAPELLQGVRAGDPMKAKHLEKALMQ FAEEGAAKVFKPSIGSGFIVGVVGALQFEVLASRIEMEYGLPVRFEASQFTSARWVHG DKTAVDKFVNANKQHIAHDNDGDIVYLTRLQWDIDRVERDYPDLKLSSTKEMMV" /product="Peptide chain release factor 3 (RF-3)." /transl_table=11 /note=", Peptide chain release factor 3, Elongation factor Tu GTP binding domain, prfC: peptide chain release factor 3" /note="Conserved hypothetical protein" CDS 286211..286504 /locus_tag="Silicibacter_295" /translation="MPKDQAAPSSDEIIAQMDVLRSDIAELSKSVSHLAKDRVGKARD AARETARDQAQTVADGAAQMSRQAEDAVRAQPLAATAIAAGLGFALGYLSNRR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Bacterial protein of unknown function DUF883" /note="Hypothetical protein" CDS 286509..286901 /locus_tag="Silicibacter_296" /translation="MFRFLKSQARRSARRARYAVLTALSAAVGAGFLSTALYAALLQA GQPHAIAALILGSLWFGLSGVFLLLKGGVGADEGAHSGSGVSGVQAAAPHVAHPHGHV STAPSVAEAFVNGMNEGAGFARMQQGRS" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(286980..288134) /locus_tag="Silicibacter_297" /translation="MTKHASARKFPPRARFLPKCEPSLYHERRSVSARASGPTTVIDP KTVTDVTNDTLSHYALPAYPAEQFCVDIGANAGDPIGILDDLVMDDIYELTSDARLRR LAFGVSTEGTITLHSESEMGQDGARLHLDCAVTLMPDLGSAIEALIAVEVDNEGLIAR LYLIPQAPLAQGTGYRLVRASREPVWTRLAQLSCVAFSRGTHITMGTGEQRPIEMLRA GDRVLTRNSGARRITWVGHTTVRAVGEMAPILIRQGALNNARDLLVSPDHRLMIYQRS DALGAGRNELMIRARDLVNGDSVVVQDGGFVDYYQILFDRHHIIYAEGIAAESMLVDP VTRPALPEEVQQRLTQPRRHGTRGDHGLEIRRPMLSHPDTVDLLKRASLR" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO2693 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 288197..288976 /locus_tag="Silicibacter_298" /function="COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /translation="MDLGIRGKRALVCASSKGLGLGCAEALAEAGVDLLMNARGSEAL EASAQDLRDRFGVRVETLACDVTDEGARAELIDRAKGVDILVTNAGGPPPGVWSDWDR ADFIKALDANMLTPIALMKALLPAMMEAGWGRVVNITSQSVKAPIAALGLSNSARAGL TGYVAGTARQVAGQGVVINNLLPGIHATDRAVSLDTGVAQAQGISMDEARAQRAATIP AGRYGTRQEFGATCAFLCSQHAGFIIGQNILLDGGATNMTL" /product="oxidoreductase, short chain dehydrogenase/reductase family" /transl_table=11 /note="identified by match to putative ortholog SPO2692 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 288981..290099 /locus_tag="Silicibacter_299" /function="COG: DNA alkylation repair enzyme" /translation="MAESFSLKDQLFNVEKTRYLAGLFDAASVEFDPRAFEADVMARL LDLELKARINWIAEMLSKHVPGPLDQVAPVIFAALPPPLDPSLRDDDFGDFIFAPLGE WVADLTKTEADLPLALDLLEAVTQRFSMEFAIRPLLKTWPDPVLARMSRWAGHAHYHV RRLASEGTRPRLPWGLAVNLPLDAPLPILDRLHGDDTRFVTRSVANHLNDIAKKDPQI VVDQLTAWQARGEQAQKELDWMTSHALRGLIKAGDPRALRLLGYDPELDLSAELELPG RVRIGEKLMLGARLQGGRGARVLVDYALTFQRAGGKTSTKVFKWKTGTLGADGLSLQK THPLKAQASTFTLLPGAHRVTLMVNGQPRASGEVEFLA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2691 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 290056..291294 /locus_tag="Silicibacter_300" /function="COG: ABC-type oligopeptide transport system, ATPase component" /gene="potG" /transl_table=11 /note=", [EC:3.6.3.30] , ABC transporter related, ABC transporter, 3a0106s01: sulfate ABC transporter, ATP-binding protein" /note="High confidence in function and specificity" /product="probable ABC transporter ATP-binding protein" /translation="MASPGQAARWSSLPEASRLGISAQPPTESVPKTKGQTMPEQRTK SALPSVQAEGHEVTPRLEIRNIRRFFEGRAVVDDVSLTVLPGQVTCLLGPSGCGKSTT LRMIAGVEMQDEGEIYVDGKLICDTIFRVPPERREIGLMFQDFALFPHLSVGDNVAFG LKGSKDQKRARARELLDRVSLAQYIDDYPHQLSGGEQQRVALARALAPSPKIMLMDEP FSGLDNRLRDGIRDETLSLLKEEDTAVLLVTHEPEEAMRMADEIALMRDGRIVQQGAP YNVYTRPVDKAAVAFFSDVNTLPAQVNGALAETPFGQFLAPGVPDGTDVEIVFRPQHL RIDFDRNGRGPEATARDGVPARGIVQRARFLGNESLVEFRMDFDGSILKATVPNVFLP AEGRAMWLTVPRDRCFVFTR" /EC_number="3.6.3.30" CDS 291307..292188 /locus_tag="Silicibacter_301" /function="COG: Histone acetyltransferase HPA2 and related acetyltransferases" /translation="MLEPCQPEAAMQQSFEIRPLTRDEIDVAVTWAAHEGWNPGPSDA TCFAAQDERGFWGGFLEGEMIACISVVTYGAAFAFLGFYIVAPQHRGQGYGYALWQRA LEHAGQRSVGLDGVVDQQENYRRSGFDLAWSNIRFGGVLDAVPRASDAFSLTWLDGLT QDVAAFDARVFPAPRPAFWQHWLRAPGHVSIAAYDETGISGFGTLRRCETGAKIAPLV ATSREAAQAVLAGLLRDWPKDEEVFLDVPEPNAAAVALARDLGLVPVFETARMYRGRR PEVARDLIYGVTSFELG" /product="Hypothetical protein F36G3.2 in chromosome X." /transl_table=11 /note=", GCN5-related N-acetyltransferase, Acetyltransferase (GNAT) family" /note="Conserved hypothetical protein" CDS complement(292194..292883) /locus_tag="Silicibacter_302" /function="COG: Transcriptional regulators of sugar metabolism" /translation="MRRTDRLFEIIQILRDGKLHRAQDIAARLEVSTRTIYRDMDTLV ASGVPVEGERGVGYMVREAITLPPLTLTPSELEALNLGMAIVAEAADPELKSAAESLA AKVDAVLPVETVAEAEAWKFAVYPFGDAARGFAWMPTLRAAIKARQKLALRYRRIDQT LTERVIRPLHMEYWGRVWTLTAWCETRGDFRVFRVDLIETAEALPELFVDEPGKRLQD YQACEDAREGS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2685 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(292917..293240) /locus_tag="Silicibacter_303" /translation="MTKTVVEVVTFKLNPGVSDADYVAASQKTESFIGAMRGFIDRRL SKGEDGTWMDYVVWADMTAAQDASAQFEQAECAADLMQMIDPKTLMMRHEHQMWTMSP ASAMG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2684 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 293484..293699 /locus_tag="Silicibacter_304" /translation="MLNNIGLPGILLIAVVVLVLFGRGKISSLMGEVGKGITSFKKGI NEGTKELEDDAAAEAKDVTPEAEKDKA" /product="twin-arginine translocation protein, TatA/E family" /transl_table=11 /note="identified by match to putative ortholog SPO2683 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 293707..294195 /locus_tag="Silicibacter_305" /gene="tatB" /translation="MFDLGWTELLVIGVVALIVVGPKDLPKLFRNVGRFVGKARGMAR EFSRAMEDAADEAGVSDIQKTFKTATNPMGSAMDSVKQATRDLTDSIDPTKFDPESET GKLAADRAENAKKIQAATARAAADRMAREAAEAAAKAEEAEAALSATPASTASSDSET KA" /product="twin-arginine translocation protein TatB" /transl_table=11 /note="identified by match to putative ortholog SPO2682 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 294192..295082 /locus_tag="Silicibacter_306" /function="COG: Sec-independent protein secretion pathway component TatC" /gene="tatC" /translation="MSQTDDLDDSTAPLIEHLAELRSRLIRAVMAFAVGIVLAFMVAE PILQFLVAPIEQTLRELGDPSPTLQYTSPQEYLFTLFRISMVFGFALSFPVIGFQLWR FVAPGLYKSEKGAFLPFLIASPFMFLLGASFAQFVVTPLAMQFFLGFADVSSIFAGLL SQATGGDVPADVAVVPETSEGVKITFFGKVNESLDITLKFIMAFGLCFQLPVLLTLMG KAGLVSAEGLGGMRKYAVVAILVLAALVTPPDVITQIILFTVVYGLYEVSIFLVGRVE KKREAQLRAEGYYDDELDGE" /product="twin-arginine translocation protein TatC" /transl_table=11 /note="identified by match to putative ortholog SPO2681 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 295237..296112 /locus_tag="Silicibacter_307" /function="COG: Predicted ATPase (AAA+ superfamily)" /translation="MSGQQDDVEDGMDQDTLTRIAEALERMAPVPQSTPDFSAASGFV WHVEPDRLEPVPEINRVELDLLVGIDRSRDTLLENTRRFAAGHAANNALLWGARGMGK SSLVKAIHGALVTDHPELKLVELQREDLPSVARLLNHLRGAPCRFILFCDDLSFSHDD QHYKSLKAVLDGGIEGRPENVVFYATSNRRHLMPRDMIENERSSAINPSEAVEEKVSL SDRFGLWLGFHPCNQDAYLAMIEGYCAAYGVTVDPERLRAEAIEWQATRGARSGRVAW QFFTDLAGREGVALR" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2680 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(296251..297531) /locus_tag="Silicibacter_308" /function="COG: Membrane proteins related to metalloendopeptidases" /translation="MTRTPKVFRTIRPIPLPFPRSSSASSGASRLRPSIALLPLVLLA AACTEPLDYDLRGQLGAFNTTRAAQTATENRPAPDSRGLITYPSYQVAVARNGDTVAD LAGRVGLPAVEVARFNGVETTDPLRKGEVLVLPRRAPEASARSGTATPGGVDIASLAG SAIDSAPSTSPNPGSVTTTTLQNTPSKPAPTRVQAGPEPVRHKVTRGETAYTIARLYQ IPVKALAEWNGLGSDFAIREGQYLLIPLKDPNARPPKAETQEAVTAPGQGSATPTPPS ATQPLPDEDVKPAAEARTEPTPTVKIQEPTRASEAAMAYPVTGKIIRAYSKGKNDGID IAAAPGSPVKAAEAGTVAAITADSNKVPIIVIRHDRNLLSVYANVDGIRVQKGDRVNR GQNIAKLRGSAEEAYVHFEVRDGFESVDPLPYLQ" /product="LysM domain/M23/M37 peptidase" /transl_table=11 /note="identified by match to putative ortholog SPO2686 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(297660..298307) /locus_tag="Silicibacter_309" /function="COG: Protein-L-isoaspartate carboxylmethyltransferase" /gene="pcm-2" /transl_table=11 /note="identified by match to putative ortholog SPO2687 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="protein-L-isoaspartate O-methyltransferase" /translation="MSGPDAQTKMQFLFALRSRGVTEAAVLEAMEAVDRGLFLRGIFS ERAYEDVPLPIACGQTISQPSVVGLMTQALQVNPRDTVLEVGTGSGYQAAILAKLARR VYTVDRHGRLVREARQVFQQMSLSNITSLVGDGSHGMPDQAPFDRIIVTAAAEDPPGP LLAQLKVGGIMVVPVGQSDAVQTLIRVRKTENGLEYDELRPVRFVPLLEGLGKDT" /EC_number="2.1.1.77" CDS complement(298304..299086) /locus_tag="Silicibacter_310" /function="COG: Predicted acid phosphatase" /gene="surE" /transl_table=11 /note="identified by match to putative ortholog SPO2688 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" /product="acid phosphatase SurE" /translation="MRILVTNDDGISAPGLAVLEQIATELAGPEGEVWIVAPAFEQSG VGHCISYTHPSILSELGPRRFAAEGSPADCVLAALHVVMKDTPPDLILSGVNRGNNSA ENALYSGTLGGAMEGALQGVPAMALSQYYGSGNRDLENPFEAARAHGAEVVRKLLSAT PQNDSPYRLFYNINFPPVAAGDVKGIKVTTQGCRSGKRFSAEEQFSPNGKRFIWVKGG DQQVSTAPETDAAANLDGFISVTPMRADLTAHDAVEALKAIE" /EC_number="3.1.3.2" CDS complement(299362..300009) /locus_tag="Silicibacter_311" /function="COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /translation="MTDKIALITGASRGLGAALAEALAPTHHIIAVARTTGALEELDD RIQAAGGSATLAPMDITVPEAMATLCRGIFDRWGKLDLWLHTAIHAAPLSPAHHVAPK DWQKSVSVNATAPSVLVPYVAPLLGQDGTAVFFDDPRAGEKFFGAYGATKAAQIALVR SWQQETIRTGPHVKLLTPPAMPTALRARFFPGEDRTPLTPPAEAAKALLTDILAP" /product="oxidoreductase, short-chain dehydrogenase/reductase family" /transl_table=11 /note="identified by match to putative ortholog SPO2679 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(300093..300347) /locus_tag="Silicibacter_312" /translation="MSNADSNVAALATQKDALPDRNLSVIGLFGSEGNMQALVRHGSG RVQTVQAGERISLGRIMAIDAAGLLIERRGEIGRLPMLVD" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2678 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(300602..301144) /locus_tag="Silicibacter_313" /translation="MLSSSRQCRCCGATFAQLLSLSCDRPDIVPGDLELQDNTAVFVT EGDVLTEDFCRFGTLRFLRAVLAIPLADSRGEEFILGTWAGVSEEVFNEYLDLFELRE TESMGSRPAWLSNQIPPDSNGPLACMLHMRPDGQYPELQVSEVNHDLARMQELGLNLE ELLTFLHAYGHDLASLVYDS" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(301341..302861) /locus_tag="Silicibacter_314" /function="COG: Glutamine phosphoribosylpyrophosphate amidotransferase" /gene="purF" /transl_table=11 /note="identified by match to putative ortholog SPO2677 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="amidophosphoribosyltransferase" /translation="MCGILGIASRNEQVFAELYDGLLMLQHRGQDASGIVTYGDGFFR ERKANGLVKDVFGAKDAETLQGRVGMGHVRYPTAGSLSAAEAQPFFVNAPYGIYLVHN GNITNTEEQRAKVTGKYSRHLRTTSDSEILLNVLADKVADAIKVNGNADPIRNIFAGV KMTMERVQGAYSVICLIAGVGMLAFRDPHGIRPLSVAQREAEGEGNDYAFASEDVAFG INGFEKLRDLKPGEAILVDLDGNKHEFQAVEGKLTPCIFEYVYLARPDSLLDGISVYK TQIRMGQTLAKQIEASGLDIDAIIPVPDSARPVALEVSNITGIRYREALVKNRYVGRT FIMPGQEERQKSVRRKLNAIPREMQDRNILLIDDSIVRGNTIKKIVQMCREAGAKKVY IASASPPVKYPNVYGIDMPTKHELVANGRSIEEIREELGADELFYQNLEDLIWAAKGG NPDIEAFDCSCFDGEYVTGSVSEDYLNTLETSTRVTKKIKDMPDAGASWNGATLAT" /EC_number="2.4.2.14" CDS complement(303323..304033) /locus_tag="Silicibacter_315" /translation="MLLDHTTAFTDYQPVDLLLDLRSGDAEAQANARLRPQNGGVLPG TLIETGSGFKQARALRPGDMVQTFDGGLREVVNVRHSVPRLTAMVHVPAGALGNDAAL ELPSDAIVAIEGDLALDLFDLPVVTAKLVALIGYNGITTALPERLARIHIECAEEELV WCEGGMVLNAAEAETEGFYELLDLAETRQIVEAGRIEATETFEIDEDAEDADFFGVEA APAPAFDPIDLLFGRYAA" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2676 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(304442..305065) /locus_tag="Silicibacter_316" /function="COG: Uncharacterized membrane protein, required for colicin V production" /translation="MANISEQAKRPLKLYFAGKQARDMEGFTIIDGAVALVIVVSALL AYARGFVREVMAIIGWVAAGVLAYMFAPQAEPLMAEIPVVGDFIADSCELSMIAAFFA VFAIALIVVSFFTPLLAGLVQRSALGGLDNGAGFFFGVLRGILLVVIGFFVYNVIMTG QSFTIVDESRSAAVFNQVIGKVEEQNPEQALGWVTQKYEELIASCGI" /product="CvpA family protein" /transl_table=11 /note="identified by match to putative ortholog SPO2675 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(305040..306404) /locus_tag="Silicibacter_317" /function="COG: Predicted ATP-dependent serine protease" /gene="radA" /translation="MAKTTFSCSACGASYSKWSGRCEGCGEWNTISEDKGLSSGGPAK KSLGAMRGKRLALSDLATQETPPPRTLCGVAELDRVLGGGLVDASAILVGGDPGIGKS TLLLQAAAQFAHAGLKTVYVSGEEASAQVRMRAQRLGLAQAPVKLAAETNLRDILTTL EAEKPQLAIIDSIQTMWADNVDSAPGSVSQVRAAAHELTTFAKTNGVSIIMVGHVTKE GQIAGPRVVEHMVDTVLYFEGERGHQFRILRAVKNRFGPADEIGVFEMTGGGLAQVVN PSALFLSERGQPSPGSVVFAGIEGTRPVLVEMQALVAPSPHSQPRRAVVGWDSSRLAM ILAVLEARCGIPFAGLDVYLNVAGGMKISEPAADLAVAAALLSAREDTALPADTAIFG EISLSGALRPAPQTENRLKEAQKLGFTAAIAPSGGKTVSVPGLTLRPAADLTGFVGEY FGAG" /product="DNA repair protein RadA" /transl_table=11 /note="identified by match to putative ortholog SPO2674 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(306726..307226) /locus_tag="Silicibacter_318" /function="COG: Uncharacterized paraquat-inducible protein A" /translation="MSASMTAASARGKTLLFLRLANLALLILYPIAWFAPLLRAGLLP IFGLSEISVLTGLQSLWNSDIVLALVVTVFALFAPYLKTIGLALVQFRLLDARSLPVL NILGKLAMADVFLIALYITLAKGISYATIEVAWGMYLFTACILASIILSIATDRHIRR ESGAGQ" /product="paraquat-inducible protein A, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2673 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(307211..307888) /locus_tag="Silicibacter_319" /translation="MLAAILAPIINGILGLFAALVSLMAELLPPVLAPIVEAILWVYV ALIAAFSHLIWGLVRLLGLASHARGISFAFFALAIAATLYLLAGMALFFEGDTQNVLR SGYSTHSVLVAFVGMLVAAAIGSCLRNDPSATEPNEAIAQTSDAPSVAPSHVSSRRRA YVTGAVLAVGCGLLGLWIYNTVLAAKEKRPCTKTETAIIVAERVVASKSGAQNSFDTE DLKCRLP" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(307952..308710) /locus_tag="Silicibacter_320" /function="COG: ABC-type oligopeptide transport system, ATPase component" /translation="MTHPMIEMREVAKAFGSNAVLRGVDLEVAKGSSLVIIGGSGTGK SVALKCVLGLIEPDSGEIRVDGKPVGQGDRDAFLSRFGMLFQGGALFDSLPVWQNVAF RLLRGSLARPRDEAREIAIEKLRRVGLKPDVADRLPAELSGGMQKRVGLARAIAAEPE IIFFDEPTTGLDPIMSGVINDLIREIVVEMGATAMTITHDMTSVRAIADNVAMLHGGK IRWTGPVAEMDNSGDPYVEQFISGSAEGPIEAVR" /product="ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO2672 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(308707..309489) /locus_tag="Silicibacter_321" /function="COG: ABC-type transport system involved in resistance to organic solvents, permease component" /translation="MTPTSALGMIGRASLGRLAALGRITRFAASTFSHMLRPPFYPRE LANALLQVGWLSLPVVALTAIFTGGALALQIYAGGARFNAEAVVPQIVAIGMVRELGP VLVGLMIAARVTSSIAAEIATMRVTEQIDALVTLSTNPMKYLVAPRVLAALLTVPVLV GVGDIIGIMGGYVVATETLDFNAAAYLKNTVDFLELRDIVSSLVKGAAFGTIAALMGC YYGMQSGRGAQGVGRATKGSVEAAAVLILAANFVLTGVFFSL" /product="membrane protein" /transl_table=11 /note="identified by match to putative ortholog SPO2671 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(309486..310523) /locus_tag="Silicibacter_322" /function="COG: Alanine racemase" /gene="alr" /transl_table=11 /note="identified by match to putative ortholog SPO2670 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="alanine racemase" /translation="MSTARLKINLDALAINWRNLDAKTNCETAAVVKANGYGLESGRV GKALAQAGARNFFVAIAEEGIALRRALGPGPGISVFAGHMEGDAKLLRDFQLTPMLNS LDQMLRHFESLPGHPFGVQLDSGMNRLGMEAAEWMAVRDIALDQNPVLLMSHLACSDE PGHGMNAYQLKNFIEMTEGLNIPRSLAATGGLLLGRDYHFDLCRPGIGLYGGAPYADA LPVVELEVPVIQVRDLAPGESVGYGNTWIAQRDSKIATIAGGYADGLHRAFQRQGIMA YAGGTPCPVVGRISMDLITVDVTDLAEVPPYLSLMNETQTVDVLANAADTIGYEVLTS LGNRYARTYSA" /EC_number="5.1.1.1" CDS complement(310708..312363) /locus_tag="Silicibacter_323" /function="COG: Replicative DNA helicase" /gene="dnaB" /transl_table=11 /note="identified by match to putative ortholog SPO2655 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="replicative DNA helicase" /translation="MSPSGDFIKNCPHRPLRLSSNDPQGFPDGIRGSFQRKTRAYQKR AIMNEITSFNGDPQPPASPDARGAADEAQATELPHSVEAEQQLLGAILTNNDVYDKVA SIINSSHFYDPVHARIYEVAAARISKNALASPVTLKAFMEDDQGLKELGGPAYLAKLA SASISAFAVRDYAQMIYDLAIRRELIALGQTIAEKARRVDVASEPKEQIVEAEQSLYQ LAEQGQTEQGFKSFLRAVTEAVNVTNEAYQRGGGMAGISTGLDDLDKQLGGLHPSDLL ILAGRPSMGKTSLATNIAFNVAKAYRRGLKQDGSEGAIDGGVVGFFSLEMSAEQLAGR ILAEASEISSHKIRQGDMTEEEFRRFVQAAKDLESCPLFIDDTPAIPISQLAARARRL KRTHGLDLLVIDYLQLCRGMSDNRVNEIAEISMGMKAIAKELNIPVIALSQLSRQVES REDKRPQLSDLRESGSIEQDADVVMFVFREEYYKEREKPGDHELDKMEEWKQAMERLH AKAEVIVGKQRHGPIGTVELSFEAQFTRFGNLAKAWQQQPDGY" /EC_number="3.6.1.-" CDS complement(312478..313158) /locus_tag="Silicibacter_324" /function="COG: Orotate phosphoribosyltransferase" /gene="pyrE" /transl_table=11 /note="identified by match to putative ortholog SPO2654 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" /product="orotate phosphoribosyltransferase" /translation="MIPSSYPSAEEIARLSARMLLEIGAVNFNTDEPYTLASGLPSPS YIDCRKLISFPRIRSTLMDFMAVTVMRNAGFEAFDNIAGGETAGIPFAALVAERLALP MTYVRKKPKGYGRNARIEGAMSEGERVLLVEDLTTDGGSKLSFVDAIRETGATCGHTA VIFYYDIFPETTKTLGDHGVQLHYLCTWWDVLAEARAQAAFSTETLDEVEKFLRDPRA WQEANKKT" /EC_number="2.4.2.10" CDS complement(313235..314275) /locus_tag="Silicibacter_325" /function="COG: Dihydroorotase" /translation="MTQSLTITRPDDWHLHLRDGDMLRAVLPETARHFGRAIIMPNLV PPVVTGAEASAYRDRILAALPEGMTFEPLMTLYLTEDTDPADVAAAHASGLVKAVKLY PAGATTNSSSGVRDFDKVRPVLEKMAEIGLPLCTHGEVTDHDIDIFDREAVFIDRVLD PIRQSTPGLRVVMEHITTKDAADYVRSQDKDLGATITTHHLIINRNHILVGGIKPHYY CLPVAKREEHRLALRQAATSGDARFFLGTDSAPHTDANKLQTCGCAGCFTATNTMALL AHVFEEEGALDKLEGFASKNGPAFYRLPENDGQITLVKQDAPVAFPEQIDTPDGPVTV FDPSFAVHWTVT" /product="dihydroorotase, homodimeric type" /transl_table=11 /EC_number="3.5.2.3" /note="identified by match to putative ortholog SPO2653 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(314318..315313) /locus_tag="Silicibacter_326" /translation="MQDDTDILEQDLSGLKPAEWQARLAEMAEENGMYQPLGERHFAT FIDQGNTLLVTFESRQGIESFSETAQPLGFDLVKNLGWSHLCLISDGDTWFREPRIYG FFDQLIDDGFFEEFDNVVFYGAGPCGYAAAAYSVAAPGATVVAIQPQATLDPRMTEWD DRFVEMRRTSFTDRYGYAPDMLDAAERGFVLYDPYQSLDAMHAALFARPNVTRLRLPC MGEAIQTRLIEMDILYRIMSLAGSGRLTAEAFYRLARARRDNNVYLRNVLNRLDYLER PYLNILLCRNVNDRRRMPRFRRRLRDLERRAAEGEFRMPPGPALPPDPQHGDDGL" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2652 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(315463..316596) /locus_tag="Silicibacter_327" /function="COG: Glycosyltransferases involved in cell wall biogenesis" /translation="MRTLAVLTVRNEGAFLLEWLAHHKAVGFTDFLVFSNNCDDPTAE ILTRLDEMGHLAHVENTGPFDKGGIQFTAMKRADKHRLAKRADWIMALDVDEFVNIHT GRGQISDLLEALPEADAITLTWRLFGNADQVRYEGERVTDRFTRAAPAVMHWPWRASM FKTLYRNSGVYRKIGIHRPRNVKDEAARDQYRWFDCVGRELMGDFKTKRVFSNYGQDN YQLAQLNHYPLGAMESYILKANRGRAVHSEDLLDVDYWVERNFNTDEDTSIRRYRAAR DAILDLFLADEALRKLHERAVQWRKDRFMELMREEPYRALFGRLMMTPPSRPISQVTG RTLAGFATLGHQNQRRIRVKKDTVPGETPSGDSPNTSPLPDKD" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(316599..318962) /locus_tag="Silicibacter_328" /translation="MRIYLHIGLHRAGSERIQAVLADKRDQLRARGILVPRAAGSKNH TRLFMAVSDPEHVDPLRYNRGFISPEKQADLRANLQESLSRDITQYQPHTLILSAHQL GTHLSRKSELERLKALLAPLSDDIRIVAHVEAQARMLADVFAEQVFEGRAASLSREVE LTREDSWWSAALDTLPPVDPQAGQFEETQGAPFWLDFKALQGFWEEVFGAGTVSFRSY RAEVFDSADVTQEVCETFGIAEQIGRVDPAKRSRPIPAAWLTRGRQFNALLLRLLAQG NHILPRKLWRQMIQDLKVDGPPLDPARLGAVTRFFTAQNTHLCAEHAALSQDVFEIET STEDWSEAPPLQGFRASQYLLAFLYRIEKATNEERAAREGDLKAHQSARAAQQSAEGA APTAKARRLMPPLALKNFAMLQGSTFKPHDRLGRVDETAERPPYTEVPPRILSKGQSG NVIVGCMKDEAPYILEWVAYHRMIGVDHFLIYTNGCSDGTAELLDRLQALGILEHRNN DNWKGNSPQQYALNQALKEPVIKQADWVIHIDVDEYINVRCGNGTLADFFDHVPDATN VAMTWRLFGHNGITTLNDRPVIAQFDRCAPKFCPKPHTVWGFKTMFKTIGAYQKISCH RPNKLEEEKRAQVKWVNGSGEDMTHEVIDNGWRSSKKSIGYDLLQLNHYALRSAESFL VKRQRGRALHVDRSIGLNYWIRMDWNDHRDITIQRNLPRMQAEMDRLLADETLRALHE AGLAWHRAKAAELHQQEEFEALYQQALEIDIPATERVAWALSLDLES" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO2649 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(318962..319621) /locus_tag="Silicibacter_329" /translation="MTVEIINLGLPKSGTTTLKDALTRAGYSVADHRIKSEEDPDDPD DRVFVGDLMYQGLYKYGDPLALLNTHDALTEVSFIYGGNSVWPQCDHAMLLALRKLHP RLCFVATRRDTEQMAHSIMRWNNLGKLRLPLSTVPGLPVGYGHEIDEQMIWIDGHYEA LAHWFRNDPLYLELDVAAPDAQYKLARFLGRPLPWWGQSNINPEGPSARGRGRRQDEA G" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2648 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 320647..321831 /locus_tag="Silicibacter_331" /function="COG: MoxR-like ATPases" /translation="MRICPVPRSAPAGCARIRCLRRCAVFGRSCPKLGLWSSGARTLS HPPCADVNWPNTLCAQHVACALRSHCLTLRAPHALLGRAVRKAGDLMTTAGFQSIDAV QSELSEAGYVCGRALATVVFLSTRLGRPLFLEGEAGVGKTEIAKALAAVTGRPLIRLQ CYEGLDAASAVYEWNFAAQMMAIRMAESAGQSDREALQAELFSQDYLIARPLLQAMQP DARGTPILLIDELDRTDAPFEAFLLEALSDFQVTIPELGTIRAPEPPMVILTSNRTRE VHDALKRRCLYHWVDYPDFDRELEILTAQVPTASEALSRQVVAFVQSLRTEDLFKKPG VAETIDWANCLLALDVVNLSPETIADTLGALLKYQDDIARLQGSEAKRLLDEARSLLQ EH" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2646 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(319632..320654) /locus_tag="Silicibacter_330" /translation="MRITAVTCVKNEGPFLLEWIAYHRLIGVTDFLFYSNDCTDGSDV LLDALAQRGGLSHLPNPAKGRAYQMEALKDCAHQPVVKQADWIWITDVDEFLNIHVGD HSIPALIEACHSPAAISVTFQFFANAGIEKFEDRPVIEQFTRSHNPDIWCGETAIEVK SLTRRDFPLGYYGAHRPFVSKSAKTHPRWCDGSGRQVPQKFLTAANPRRIRKFPAKGA RQLATLNHYALRSLDSYLVKNDRGDVNRENRAFDDTYWRERNDPSWEDRSILRLLPNL KAALAEMKSDPEIARLHDACVAAHLAQRDALLAQPAYQAMRAQLQKASPLPPQEEAML MRLGLM" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2647 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 321895..323178 /locus_tag="Silicibacter_332" /function="COG: Protein containing von Willebrand factor type A (vWA) domain" /translation="MVEYPSLAISDDPKLAANITHFARALRKAGLNVGTGRVLDAIRA VEAAGFTSRRDFYWTLHACFVSRPEERVVFGQVFRLFWRDPRFLEHMMAAMLPAIRGV QQERAAKPAETRAAEALLDGQLPEHPEESPEATDEAEEIEIDAAMTLSAEERLKTLDF EQMTTEEIQQAKRMLATLRLPIAPLKTRRHQPAPQGARPDWRRTMRGAGRTGGEIARI ARSKRAERFPNLVVLCDISGSMSQYSRMVLHFLHAVANRPADGRQGRWAQVHGFTFGT RLTNISRHLKQRDVDAALAAAGAEAQDWQGGTRIGGCLHAFNRDWSRRVMGQGAVVLL VSDGLDRDVPETLALEMQRLRLSAGRLVWLNPLLRWDGFLPRARGIQAMLPHVDSFRA GHNIASLEDLAQALSRPDDTGEKLRLMAMMQEERA" /product="VWA domain containing CoxE-like family protein" /transl_table=11 /note="identified by match to putative ortholog SPO2644 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 323294..324322 /locus_tag="Silicibacter_333" /function="COG: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family" /translation="MTIAGMTSGTLSNAEEGSLSRFDAAPELALAWHRAGQGAVLCTV VQTWGSAPRRTGSQLVVGGDGRIEGSVSGGCVEGAVVVEAQEALAQGCHKLLEFGVSD GDAFAVGLACGGTIKVLLEPVGSVLKEETLDALVTARREREAVAYEVSLKSGKGRLVE AGAYPERLRMDRSGVEEDGNTFVAVHNPPLRLIVVGAVHIAQALVPMAQIAGYDPVVI EPRAAFGSEERFPGVRILEDWPDDAVAQIGFDSRCALVLLTHDPKLDDPALMAALRSE CFYIGALGSNRTHGQRRERMIEAGFGTADIARIHGPVGLDIGAASPSEIAVSILAEIT AVLRGKAE" /product="XdhC/CoxI family protein" /transl_table=11 /note="identified by match to putative ortholog SPO2640 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 324319..325392 /locus_tag="Silicibacter_334" /function="COG: Molybdopterin biosynthesis enzyme" /translation="MKFGPVPLRAALGTIAAHSIRAAARPYGSGRDYKIAKGTELTAD HIEDLNELGHQEIIVAQLEPGDVHEDAAALRLAQALVPDPEGQELRISGAGAGRVNLY ARGAGVVRLDAAQVAAVNGIDPMITVATVPDYHRVDPDSMVATIKIISYAVPEAHLAQ AVVAAKAAIRVLAPAFGTATLIETRITEEIPSDKGRAAMAGRLDRMGITLSPRVVKPH RTAEIASALRDAPGEVLLVLTGSATSDPQDVAPEALRMAGGEVTRFGMPVDPGNLLFL GYLGEKPVIGLPGCARSPALNGADWVLERVVCGLDVTSADIAAMGVGGLLKEIPTRPR PRRSAGGSEPRRIKSSRDLLTRD" /product="molybdopterin biosynthesis protein" /transl_table=11 /note="identified by match to putative ortholog SPO2639 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 325437..325922 /locus_tag="Silicibacter_335" /function="COG: Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs" /gene="coxL" /transl_table=11 /note="[EC:1.2.99.2] , [2Fe-2S]-binding, [2Fe-2S] binding domain" /note="High confidence in function and specificity" /product="carbon-monoxide dehydrogenase small subunit" /translation="MTKVSMTVNGNPVSGNVEGRTLLVSFLRDQQGLTGTHVGCDTSQ CGACVVHVDGKAVKSCTMLALEAEGAEVATIEGQAAPDGTLNAIQAAFQEHHGLQCGF CTPGMVMSAAALLKENPKPSEAEIRHYLEGNLCRCTGYHNIVKAIMAASGQDVSAIAA E" /EC_number="1.2.99.2" CDS 326077..328455 /locus_tag="Silicibacter_336" /function="COG: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs" /gene="coxL" /transl_table=11 /note="[EC:1.2.99.2] , CO_dehy_Mo_lg: carbon-monoxide dehydrogenase, large subunit" /note="High confidence in function and specificity" /product="carbon monoxide dehydrogenase large chain" /translation="MPKDIEAKESGIGAATKRREDVRFLTGTGNYADDINVNGQAYVH FLRSDVAHGRITSLETAAAAAMPGVLRVFTGADFEGVGGLPCGWQVTDRFGEVMQEPA HPVLAQGKVRHVGDPIAAVVAESAELARDAAEAIELEIEELPAVIDMKAALAEEAPKV HDDLTSNLCYDWGFVEENKDAVAKAFDEAAHVTTLELVNNRLVANPMEPRVAVGDFNR ATGESTLYTTSQNPHVIRLLMGAFVLGIPEHKLRVVAPDVGGGFGSKIFHYAEEAFCT FAAKALNRAVKWTSSRSEAFMSDAHGRDHVTKIELALDADNNFTALRTETYANMGAYL STFAPSVPTWLHGTLMAGNYKTPLIYVNVKAVFTNTVPVDAYRGAGRPEATFQLERVI DKAARELDVDPVALRRQNFVTEFPYATPVAVEYDTGDYVATMDKLEEIADIAGFAARR AESEKSGKLRGLGVNCYIEACGIAPSNLVGQLGARAGLYESATVRVNATGGIVVMTGS HSHGQGHETSFPQVIAEMIGIPEDMVEIEHGDTNNAPMGMGTYGSRSLAVGGSAMVRA TEKIISKAKKIAAHLMEASDADIELKDGRFSVAGTDKSVAWGDVTLAAYVPHNYPLEE IEPGLEETAFYDPANFTYPAGAYACEVEVDPETGKVTIERFAAADDFGNIVNPMIVDG QVHGGIGQGIGQALLEGCVYDEDGQLLSASFMDYAMPRADDVPFYQVDHSCQTPCTHN PLGVKGCGEAGAIGSPPAVVNAVVDALRSAGKDVTHIDMPLTPARVWAAMQG" /EC_number="1.2.99.2" CDS 328546..329334 /locus_tag="Silicibacter_337" /function="COG: Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs" /gene="coxM" /transl_table=11 /note="[EC:1.2.99.2] , Molybdopterin dehydrogenase, FAD-binding, FAD binding domain in molybdopterin dehydrogenase" /note="High confidence in function and specificity" /product="carbon-monoxide dehydrogenase middle subunit" /translation="MYEFEFARPETVADAVQALSEEDAQALGGGQTLIPTLKQRLAMP STLVSLGGIAEIRGICQTDDGKLAIGGATTHAEVAEGAAAYPALAALAGQIGDPAVRN RGTIGGSLANNDPAACYPAAALASGATIVTNAREIAADDYFQGMFTTALEEGEIITEV RFPVAEAANYQKFLQPASRFAMVGVFVAKFADGVRVAVTGASEEGVFRWREAEAALSG AFSADAISGLSVEAEGMIGDIHGTKDYRAHLVTVMTKRAVAAAG" /EC_number="1.2.99.2" CDS complement(329453..329884) /locus_tag="Silicibacter_338" /function="COG: Translation initiation factor 3 (IF-3)" /gene="infC" /translation="MHPAKAMQMAEEAGLDLVEISPNATPPVCKIMDFGKFKYEQQKR ESEARKKQKIIEVKEVKFRPNTDTHDYDVKMRNVIKFLENGDKVKVTLRFRGREMAHQ NLGRELLQRVAEDIKELGKVENMPKMEGRQMIMMIGPLPSK" /product="Translation initiation factor IF-3." /transl_table=11 /note=", Initiation factor 3, Translation initiation factor IF-3, C-terminal domain, infC: translation initiation factor IF-3" /note="Conserved hypothetical protein" CDS 330250..331047 /locus_tag="Silicibacter_339" /translation="MKIAGVGAAIGLVVVAGAVWYLNQPEDQPVTDMPAEVANEAAPV TTEDTEAAAEVETGEPEAGDLQEQAQEAVDAIAETAETAVDQATEAVENAVDAASEAA ENLVEGAGETVEAVQEQAEAAVAAAEEEAVAAVEAAQDGVADAVEGAQESASEAVSTV TEGAVDLATEAQNTADAAAEAVTEAATPEIGADATADVTAAAEAETPAALLTPEGFNY DRVIELIEGSELDPLKKTALKSAITQARDNPDLLKAALQSARTALGL" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(331200..332072) /locus_tag="Silicibacter_340" /function="COG: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases" /translation="MMNEITPVSEPVTEAAAPAKAKPALPDAQTVTQVKHWTDRLFSF RCTRPASLRFRSGEFVMIGLMGDPDPKTGKQKPLLRAYSIASPSWDEEMEFYSIKVQD GPLTSKLQHIKVGDEIILRPKPVGTLVHDALLPGKRIWFFATGTGFAPFASLLREPQT YEDYDEVIITHTCREVGELTYGRELIESLKEDELLNEVIGEGFWKKIKYYPTTTREES AKMGRITDLMRSGEAFADLGVPPLNPESDRAMICGNLAFNLELKDLFENTYGLEEGAN SKPAHFVVEKAFLD" /product="ferredoxin--NADP reductase" /transl_table=11 /EC_number="1.18.1.2" /note="identified by match to putative ortholog SPO2637 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(332239..332643) /locus_tag="Silicibacter_341" /translation="MSVIVTDTGFAHDDWTGGFEGANVLDLASDTDPATLKDQLDGVE MIRVDFPSFADGRGFTIARMLRLMGYDGRLRAKGHVISDQYAMARRVGFDEVEISDDL ATRQPEGEWLFRANWQSHNYQARLRAHSNAAR" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2636 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(332649..333410) /locus_tag="Silicibacter_342" /function="COG: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes" /gene="cysH" /transl_table=11 /note="identified by match to putative ortholog SPO2635 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="phosophoadenylyl-sulfate reductase" /translation="MTRIDQEIRGHPAAAGSAEALAEQVAALNARFKHHSATSVMEGA LRDAGNIALVSSFGAESVVLLHMAAVIDPSVPVLFVDTELLFTETLVYQQEVSERLGL RNVHVIKADDIAEKDPYGAMRFSDTDACCTLRKTIPLQKALAGYDGWITGRKRFQSGT RAALDFFEVEDGTGRMKINPLAHWAPEDVRAYMDENRLPRHPLVAKGYPSIGCEPCTS PVAEGEDPRAGRWRNQNKEECGIHVVDGKFVRTGA" /EC_number="1.8.4.8" CDS complement(333414..335081) /locus_tag="Silicibacter_343" /function="COG: Sulfite reductase, beta subunit (hemoprotein)" /gene="cisI" /transl_table=11 /note=", [EC:1.8.1.2] , Ferredoxin--nitrite reductase, chloroplast precursor (EC 1.7.7.1)., Ferredoxin-nitrite reductase, Nitrite and sulphite reductase 4Fe-4S domain, CysI: sulfite reductase (NADPH) hemoprotein, beta subunit" /note="High confidence in function and specificity" /product="sulfite reductase (NADPH) hemoprotein beta-component" /translation="MYKYNDFDSAFLAERNRQFRAQVERRIAGALTEDEFKPLRLMNG LYLQLHAYMLRVAIPYGTLNPDQMRALALLAEKWDKGYGHFTTRQNIQYNWPKLKDVP DMLDALAEVNLHAIQTSGNTIRNVTADHFAGAAADEIEDPRPIAELIRQWSTDHPEFQ FMGRKFKIAVSGAANDRAVLKAHDLAIKIVKNEDGEVGYQVLVGGGLGRTPMIGKVLN DFVAADDLLPYIESVISVWNQLGRRDNKYKARIKITVHELGLEKIRELTEERFAQVRP TFGGADQALFQDIKRHFAAPEFRSEGTEVFDAAYDSDPVFRAWADTNLAEHKAPGHAI ATISIKKHGATPGDATAAQMYAMADIAEEFAYGELRISHEQNVILPHVHKNDLPAIHA RLKAADLATANIGLISDIIACPGMDYCALATARSIPVAQEIATRFEDLKLEHDIGHLQ IKISGCINACGHHHVGHIGILGLDRAGVENYQITLGGDATETAAIGTRTGPGFAYDEI VPAVERIVETYLEQRESAEEEFLQTYRRVGMEPFKAALYPASEKKVA" /EC_number="1.8.1.2" CDS complement(335074..335394) /locus_tag="Silicibacter_344" /translation="MARAFTPKVVTANHLLEGDVIYLTAENDWTRALSEAELITDEAE AQLRLLEAQSQAQIAVGAYLADAKAGEQGPEPTHFREEFRRTGPSNYAHGKQEAKLEA TANV" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2633 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(335394..336221) /locus_tag="Silicibacter_345" /function="COG: Uroporphyrinogen-III methylase" /gene="cobA-1" /transl_table=11 /note="identified by match to putative ortholog SPO2632 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="uroporphyrin-III C-methyltransferase" /translation="MDRWMPRDTHYIPPLTPPLPGAMGVMCPGVVAFAGSGPGDVDLL TLKVLKALGEADVILFDRLVSKDIMALAHEGALLEDVGKEGFGPSMAQEEICARLVHH AKRGLKVLRLKSGDPTIFGRLDEELSACEAADVDTQILPGITAASAAVAAIGQSLTQR GRNTSVRFLTGHDMKGFADHDWAQLARRGEVAAVYMGKKSARFVQGRMLMHGADLTTP VTVVENASRADQRVLATTLEHLPADLAAAHFSGPALTFLGLAPRQAAALTDIQMELA" /EC_number="2.1.1.107" CDS 336357..336836 /locus_tag="Silicibacter_346" /function="COG: Transcriptional regulators" /translation="MTVRIDATDRKILAELQRDAGQSLDEIAKQVGSSKTPVWNRIRK LREAGVVGNQTVILDAEALGFEACFFVLIRTSEHEASWQASFLKALQERPEVQEAHRL AGDIDYILKVRVKNARAYDKFYQALISEVRVHNVTALLSMEEIKSTTHLPLEQIRVD" /product="transcriptional regulator, AsnC family" /transl_table=11 /note="identified by match to putative ortholog SPO2631 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" tRNA 337013..337083 /locus_tag="Silicibacter_51" /gene="Silicibacter_51" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS complement(337385..337627) /locus_tag="Silicibacter_347" /translation="MVLTEIETGTQEAFGTIEKAHHWLSRKWPVADSAARAALAQVEA AMECMGSVQDARSAFQDAACSAGFHIADQSAQPLAS" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(338095..338343) /locus_tag="Silicibacter_348" /translation="MLENLSWGDGQMTNTPAKDDDVDIFAHLSVSAAKSKTSDVMSAA DRTTQTVKRLRDEEAAANAEKVARLRAFRKKHTPKPKT" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(338336..338542) /locus_tag="Silicibacter_349" /function="COG: Cold shock proteins" /gene="cspA" /translation="MANGTVKWFNATKGFGFIQPEDGTQDVFLHISAVERAGINRIDD GQKVTFDLENGRDGRTSASNLALA" /product="cold shock protein CspA" /transl_table=11 /note="identified by match to putative ortholog SPO3625 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(338977..339876) /locus_tag="Silicibacter_350" /function="COG: Transcriptional regulator" /translation="MTVDISLLRVFHAVMEERNVTAAARRLGQSQSTVSAALARLRDA LGDELFLRARYGVEPTEKALQIAPDIAAGLDRLEQAFRAAEPFDPIRSTRRFRLLLGP YAEVVLAPDLAEAFAQHAPKAQLELAPIGPDLDPRKLAAQSFDLAIGRFAPPPDDLVV SDLFSDGFRCIVAPAALPEGASLDLDLYETLPHVIVAPPGRWRTGVHKLTAASGLQRN TAVAVSHFLTAAPTVARINGIATVPARIAAMVAAPYGLRNVAVPRDLGTFPTQIAWHP HQRRDPRHVWLRDLLLSLTATST" /product="putative LysR-family transcriptional regulator" /transl_table=11 /note=", LysR, substrate-binding, Bacterial regulatory helix-turn-helix protein, lysR family" /note="Hypothetical protein" CDS 340007..340687 /locus_tag="Silicibacter_351" /function="COG: Putative intracellular protease/amidase" /gene="nonF" /translation="MARILILSTAADVLGDTGKPTGVWYEELATPYYAFLDAGHEVTL VTLEGKPVPIDPNSDETGDAAPASVTRFRADAAATALLAKPGRLEDEDVTAYDALYIP GGHGAMYDLAESATAAAAIGKAWDSGKVVASVCHGPAAFAKVVDAKGEPIVKGRKVTA FTNSEETAVGLEKAVPFLLETKLRELGAEFENVADWQPLAVADGQLVTGQNPASSEAA AKEVLALL" /product="Chaperone protein hchA (Hsp31)." /transl_table=11 /note=", ThiJ/PfpI, DJ-1/PfpI family" /note="Conserved hypothetical protein" CDS 341522..342433 /locus_tag="Silicibacter_353" /function="COG: Transcriptional regulator" /translation="MHLCMNWSAINFDWNQVRSFLATAEEGSFSAAARVLNQTQPTVG RQVGALEEALGVTVFERVGKSLRLTTAGTELLVHVREMADVANKISLTATGQSQSVEG QVRITASDVMSTYQLPAMLKQIRLAAPRLEIDVVAANDLRDLHRREADIAIRHIRPTQ PDLIARLVAQASAHLYAASSYLDQVGRPRSEEELAQLDFVSFGDVERFIGFLNPAGIP VTRKNFRIGSHSGVVSWELVRQGFGVSVMSDDVAAPTPGIERILPDRDPFAFPIWLAT HSELHTARRIRLVFDQLAEQFKARETS" /product="transcriptional regulator, LysR family" /transl_table=11 /note="identified by match to putative ortholog SPO3490 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(340790..341527) /locus_tag="Silicibacter_352" /function="COG: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase" /translation="MHNHPAKRINSIKLCLDVKVALTPQTESRDMAASSKDAAFWSKI SRKYAADPIRNMDGYLQTLDRTKSYLKPEDHVLEIGCGTGSTALLLAPHVAHITGTDL APGMIEIAAEKRAKEGLENVTFKVAETLDHNPQDGAYDAILAHNLLHLLHDLDQSLQR IAALTKTGGVFISKTVCAPKAGGIKYALIRALAIPLMQRIGKAPYVNFISVPDLERRI ERAGFEICEVISQPGLMQSHYVVARKL" /product="methyltransferase, UbiE/COQ5 family" /transl_table=11 /note="identified by match to putative ortholog SPO3491 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(342539..343414) /locus_tag="Silicibacter_354" /function="COG: FOG: EAL domain" /translation="MLRDKRIALWTRVSSPSCHKEELRDGREMTLTDTEKCKACRNGK GFEVPISMAFHPIVSVGSGKVFAYEALVRGQDGSGAAQVFEQVNDDNLYAFDQKCRKT AIEHASRLDLGDTGSLLSINFLPNAVYDPKACIRLTLETAKKTGFPVSQIMFEFTEVE RISAPHLLDILSTYRRLGFLTSIDDFGAGYAGLDLLSRFQPDVVKLDAELTRNIDQSS VKQTIVRHVISMLEQLGIIIVAEGIETQGEFSCLYDLGVDLMQGWLFAKPGFETLPDV RWPDALRSVEESKTA" /product="Hypothetical 80.5 kDa protein in ntrC 5'region" /transl_table=11 /note=", Hypothetical 80.5 kDa protein in ntrC 5'region (ORF1)., EAL, EAL domain" /note="High confidence in function and specificity" CDS 343664..344218 /locus_tag="Silicibacter_355" /translation="MNGFGRQFFRMAAVSFGGAIASFSGPSEAAAQEQRFAAYITGYG FWDNTPPGSVAISHPVKHRRAGGIGTYRDPITLAVGHTLKGRRDILDFPAGTVFYLPR LKKYAIVEDTCGDGPRPQDGPCHTGARGYPWLDLWVGGQTVSPAQSEKCQYKITAVQM VYLDPKPNYEVYPGEVIASGCAVH" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 344356..344730 /locus_tag="Silicibacter_356" /translation="MSILRAIFAIPLIALFLIGPLIESAAHAKGAGCLNVQCCDRGPE ETLVSKTEVSKTDPSTQMEASAGDDLAMKGTCALMACQAAALVGVPAMVHPLTFQTSS WVQIDLSPLSQGPSALDRPPNS" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 344788..345219 /locus_tag="Silicibacter_357" /translation="MNQKYLILGASVALAAAAFVFLRPEASGTAARSPSGDTASLAAI TIPDLAGNQIVGRNIFETSCAACHGAQGGGNPEAGPPLIHKIYEPSHHGDESFQRAVA NGVRAHHWHFGDMPPVEGLTRGNVAMVIDYIRAVQRANGIN" /product="cytochrome c family protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0359 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 345222..345572 /locus_tag="Silicibacter_358" /translation="MKTMKKTALIVWLACISSGAFAHSRVDTTTPADGDVMSEVPAQI SFDFADDIRLTRVEMTHAEHPSVQLDLGDQKSFDRAFNLPLNDMGAGTYQIEWRGLSI DGHAMQGGFTFEVE" /product="Protein yobA precursor." /transl_table=11 /note=", Copper resistance protein CopC, Copper resistance protein CopC" /note="Conserved hypothetical protein" CDS 345575..346441 /locus_tag="Silicibacter_359" /translation="MPDIWAQAAILVKVLLYVGALGATGLVMIRLIFAAQTAPAEALL RRQIRSLGAVALIAAGLGFSLQGAALTGGLDGMTDPEMLGLLWQTPVGDVLLYRLIGA SLLVVGPAFLRVGEWGALAGGCLLLWSFAQVGHVPNLAQTGVQALLFLHLLGVAFWIG VLSPLHWLCQRRDHLQAAAQLGHRFGQIAQYGVPALVGAGAVLGALLLGSVSALLGTS YGLAFVTKIALVGAILALAAANKLRFVPAMAAGDSAAARHLAISLRVEGAAFLAVLSA TAALTSLFSVPG" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 346583..347014 /locus_tag="Silicibacter_360" /translation="MRRFLAIATCLVASGAMADHELEGRDLDRGQALYGDYCAACHGA NLEGQPDWQTPGADGVLPAPPHDETGHTWHHDNQLLFDYTKQGGAEALAARGVSGFPS GMPAFADSLSDEEIWDILAYIRSTWPKRVQDIHADRNPRHD" /product="cytochrome c family protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0361 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 349291..349899 /locus_tag="Silicibacter_362" /function="COG: Uncharacterized conserved protein" /translation="MAWIKTVAFGDATGKLRKLYDRVTGPGGNVDNIMMAHSLRPHTM EGHMALYKNVLHHSGNELPKWVLEMIGVWVSSLNGCAYCVEHHFAGLKRLMRDDARAE AIRAAIEARDIKALPVRACEMAAMDYARKLTQAPTEMMAADLEPLRAEGLSDGHILEI NQVVAYFAYANRTVLGLGCSTEGDVLGLSPGNSDDPTDWGHA" /product="alkylhydroperoxidase AhpD family core domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1255 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(347120..349297) /locus_tag="Silicibacter_361" /function="COG: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit" /gene="parE" /transl_table=11 /note="identified by match to putative ortholog SPO1253 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" /product="DNA topoisomerase IV, B subunit" /translation="MPSTTSSDARSILLPQCDVSIVKRAGFDHISSDLCSTPPQSSIC VDPRRPLSPPDDMRHNEIKPHQRMSSDPHMADDLLSPSSSDTYDASSIEVLEGLEPVR QRPGMYIGGTDERALHHMVAEILDNSMDEAVAGHANRIEVELHADYSLTVRDNGRGIP IDPHPKFPDKSALEVILCTLHAGGKFSGKAYQTSGGLHGVGSSVVNALSDSLVVQVAK NKELFEQRFSRGKPLGGVEKIGAAPNRRGTTVTFHADEQIFGSHRFKPARLFKLVRSK AYLFSGVEIRWKSAIDDGETPQEATFHFPGGLRDYLTEVLGKSSVYADAPFAGKVEFR EKFGEPGYVEWAINWTPSRDGFTQSYCNTVPTPEGGTHVAGFWSAILKGIKAYGELVG NKKAGQITRDDLMAGGCALVSCFIADPAFVGQTKDRLSTEAAAKMVENSVRDHFDNWL AADTKSAGAILDFLILRAEERLRRRQEKETARKSATKKLRLPGKLTDCTSKDRSGTEL FIVEGDSAGGSGKGARNREYQALLPLKGKILNVLGAASGKLTSNAEIRDLCEALGVGL GTKFNLDDLRYDKIIIMTDADVDGAHIASLLMTFFFTQMRPLIDGGHLYLACPPLFRL TQGAKRVYCLDEAERDMWMEKGLGGKGKIDVSRFKGLGEMDAKDLKETTMDPKTRKLI RVTIDEDEPGETSDLVERLMGKKPELRFQYIQENAKFVEELDV" /EC_number="5.99.1.-" CDS 349996..350634 /locus_tag="Silicibacter_363" /translation="MIRTFATLAVLAAPLPVLAHPHIFVDSGLKLEVDAEGFLKAAEV TWVYDDFYTLLVFEDMMLDSDFDGALTPAELERLKGFDLNWVEGYEGDLYLTQRDTQL SLGAPEHLSTEVRDGVIITRHRRPVTEPVPVLANGVTARMYDPTYYTAYDLNRGVEIT GPCAAQVTPPNLDQAYTLVEELLYSMPTEQAEDAFPEVGSAFASTVAVACEG" /product="Hypothetical protein HI1249 precursor." /transl_table=11 /note="Conserved hypothetical protein" CDS 350639..351721 /locus_tag="Silicibacter_364" /function="COG: ABC-type uncharacterized transport system, permease component" /translation="MRHLPGIVLAITLVALAALAIWLWGLGGADHILRAASEAQRDAQ NAMARGLRALKGGQPGAWWGLMGVCFAYGFFHAAGPGHGKLVIGGYGLGSAVTLWRLS ALAVASSLAQAATAVLLVLSGVWLFDWGRERLTATAEDLLAPVSYALMALLGLYLLLR GLRRGWRLRAAEAGPHAHADHHHVPAGTGGAQDHAPVALQSVGTHHNHHHDHQHHDHD HHDHHDHGHNHHAHGPGEVCASCGHRHGPTLQEAASLRSWREAVAIILSIAARPCTGA VFLLLLTWRLDVLGAGVAGTFAMGLGTASVTLCVALLAAGVRGGLLMRVLSAGGNRGA QMAAALEIAAGALVLALCLQLLLRSL" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0884 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 351883..353301 /locus_tag="Silicibacter_365" /function="COG: Na+-driven multidrug efflux pump" /translation="MARIDPTPQMSYGGHIRAVSILGLPLIGGHLAQFAIGLTDTVML GWYGVNELAAVTLAGSFFFVWFILGAGFAFAVMPMVASATATDDHRRIRRATRMGLWL SIVYGVLSMPLMWYSETILLAAGQEAQVAADAGTYLRIAGWGIFPALLVMVFKSYLAG LERTQVVLWITVLAAVINAIVNYVLIFGHLGLPEMGLQGAALASLATQTVSVVAVVAY ALWRLPEHDLLRNLQRPDWEMMREIVRHGLPIGLTTLCEVSLFSASALMMGWLGTVPL AAHGIAVSVAGLTFMAHLGLSNAATIRVGNALGRGDKTHMVRGAIVVTLASLGIAVAT AMVFFLAPEPLILLFLDPEDPQKTEILAIGVSLLAMAGLFQLMDGMQAIALGLLRGLL DTGVPMVMAALSYWAVGVPTSYILGFRAEMGGVGVWIGLILGLSTAGVLLLLRFWFHA LRRVPTAPTGEMRADEIMADPV" /product="MATE efflux family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1260 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(353371..353787) /locus_tag="Silicibacter_366" /translation="MTTALPEYYFRVRENGAMVFRLDTENRNRRIEMDQIAVINLKKG EIKPHGDRSLSAEDLSAIEAWMEERRTLLAQREMDDILRAVDHLNLTAQWAQSRASDA QLERVTDTLLMAMHDLRSVLVRKKADRLAKAEKASG" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1263 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(354070..354882) /locus_tag="Silicibacter_367" /function="COG: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases" /translation="MRILFLGDVMGRAGRAAITETLPRLRDEWRLDFVVVNGENASNG MGLSGEHAKILFEAGADCVTLGDHAFDQKDMLQYIEQDSRIVRPLNFAKGAPGRGHRL FTARGGQKVLVLQALGQVFMKRAFDDPFGAVEGVLKSHPRGGLAQAIIVDMHCEATSE KMAMGHFCNGKASLVVGTHTHVPTGDAQILEGGTAYLTDAGMCGDYNSVIGMDKAEPM RRFLTGMPKSRFTPATGAATLSGVYVETDDRTGAAKRIEMVRQGGLLQQAAP" /product="Hypothetical protein MG246." /transl_table=11 /note=", Conserved hypothetical protein 282, TIGR00282: conserved hypothetical protein TIGR00282" /note="Conserved hypothetical protein" CDS 355259..356098 /locus_tag="Silicibacter_368" /translation="MSTPVLNLDPDTLLMSSKDARAAAAPYAAEYQGRGPFNYGGYDN FLNPEILERVREELKQLPEAANSYDRPQERLKTSYVPERLPMYTRQLFYALNSRPMLA FIEELTGIKGLIPDPYFAGGGVHVVANGGHLDIHADFNHHAGLNLERRVNLLIYLNKD WREEYGGSFEVWDENMAGKLASYVPLFNRMCMFSTSSESWHGNPEPVNHPDGEPRMSI ALYYYTATWDSTRKSHTTLFKPRPGTKDQRDRQVARRELLQDLLPPVLHRKLAWRLEK LGF" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(356263..356850) /locus_tag="Silicibacter_369" /function="COG: 5-formyltetrahydrofolate cyclo-ligase" /translation="MSDTDRDAGDLTAIKAAARKAAFVRRKGAFETQRPGAAGHLAEV LAGYRGVPLAGYMPIRTEIDPLGVMAEAAAHGPVGVPVIQGAGLPLKFSRWQPEGALR DGPFGAKVPEVDDYFDPEILIVPLVAFDAAGNRLGYGGGFYDRTLDRLRAQRATLAIG FAFDAQEAEGLPLEPTDQPLDMIVTESRVLDFKRP" /product="5-formyltetrahydrofolate cyclo-ligase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO2954 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(356873..358261) /locus_tag="Silicibacter_370" /function="COG: Mg/Co/Ni transporter MgtE (contains CBS domain)" /gene="mgtE" /translation="MTTGENTPEAETMGEDAYELDRKRVAQILFALDRDDRDALVELM DPLHPADIADLLEQINAYDRGRLIRLYDKEFDGDILSELDESIREEVIAALNPEVLAD AVRDLDSDDVVDLLEDLEEPQQEAILDALEDSDRVAIEQSLSYPENSAGRLMQREVVT APEHWTVGQAIDHMREAEELPEQFYHVVIVDPRMHPIGQVTLGRLMSSRRTKPLIEIL EETFQVIPVGQDEEDVAYAFNQYHLISAPVVDEGGRLVGAITIDDAMAVLDEEHEEDI LRLAGVGEGSLSDRVSETTKQRFPWLAVNLVTAIFASLVIAQFEATIAQFVALAVLMP IVASMGGNAGTQSLTVAVRALATRDLTGSNVWRVIRREVLVGLINGGIFAVVMGVIGV VWFGTPMLGVVIAAAMVINLVVAGLAGTVIPVILDRIGIDPALASGAFVTTVTDVVGF FAFLGLAGAVLI" /product="magnesium transporter" /transl_table=11 /note="identified by match to putative ortholog SPO2955 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 358400..359689 /locus_tag="Silicibacter_371" /function="COG: Cytosine deaminase and related metal-dependent hydrolases" /translation="MKQDLILLGRVLSFCASPFAPDGPEAAVEEHEAIALRAGKIVAL GSRAALSKVLPEAEIVDHGQKLIVPGFVDAHVHYPQTAIIASWGKRLIDWLNTYTFPE EMRFGNPAYAAEIAARYLDLTTACGTTTVASYCTIHPESVDALFEAAQARGQRVVAGK TCMDRNAPEGLRDTPQSAYDDSAALIQRWHGRERLIYAITPRFSPTSTPEQLEALGAL WTAHPTCLMQTHLSEQLDEIEWVRTLFPEARDYLDTYERYGLLREGALFGHAIHLEPR ERARLLEARASLIHCPTSNTFIGSGLFDMNGLMREGHRIGLATDTGGGSSFSMLRTMA AAYEVAQLRGTPLHAAQLLWLATLGSATALGLQDKVGNLAVGREADLVVLDLASTPAI AQRATRAETLWEALFPTLMMGDDRAIAEVRINGQKAV" /product="guanine deaminase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2956 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(359788..361128) /locus_tag="Silicibacter_372" /function="COG: Cytosine deaminase and related metal-dependent hydrolases" /translation="MTDFLLKNAQTVLTMDDDRRVLHAVDIRVRAGVIAEIGPTLGGA ETKVDVSGAVVTPGLVNTHHHLYQNLTRAVPGGQDALLFGWLQTLYPIWARMGPEHLE VSTQLGLAELALSGCSLTSDHLYLFPNGGRLEDTIHAAAEVGLRFHPTRGAMSIGESD GGLPPDSLVEREADILADMIRLVDAYHDPSDGAMCRVGLAPCSPFSVSRELMRDTALL ARDKGVMLHTHLAENDEDIAYSEAQFGCRPGQYAEDLGWTGDDVWHAHCVKLDVEEID LFAKTRTGVAHCPCSNCRLGSGIAPVRQMRDAGVKVGLGVDGSASNDMASLWDEARQA LLLQRVANGADAMSAYEALEIATRGGADVLGRPDCGRIAVGKRADIAVWDVSGLASSG SWDPAALVLAGPRQVRDLFVEGRQVVASGRLTTVDTAAVIRRHGALAQALANGD" /product="hydroxydechloroatrazine ethylaminohydrolase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2957 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(361339..362133) /locus_tag="Silicibacter_373" /function="COG: 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase" /translation="MTHPSTLSDLDVARRLAEAARAAILPHFRNSATAADNKLEAGFD PVTVADRAAEEAMRAVLRKLRPDDGVLGEEFAATTGTSGRTWVLDPIDGTRGFISGTP TWGVLIALSDAKGPMLGIIDQPYIGERFEGCRGHAQVVGPHGTRPLLTRKTEALSEAI LFTTFPEVGTEAERTGFEQVAQHVKLTRYGMDCYAYALLAAGTVDLVIEAGLNAYDIQ APIAVIEAAGGLVTNWQGGAAHEGGRALAASNPTIHAAALELLREA" /product="inositol monophosphatase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO2958 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(362421..362792) /locus_tag="Silicibacter_374" /translation="MAHPVDIHVGKRIRHRRWLIGMTQQQLAEKVGIKFQQIQKYETG ANRVSASRLWDISDALDVNISFFFEGLQDETKSVPDKARVPADLMGDKEALDLVRSYY AIPENQRRRLFELARVLSDVA" /product="DNA-binding protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2959 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 363157..364131 /locus_tag="Silicibacter_375" /function="COG: NADPH:quinone reductase and related Zn-dependent oxidoreductases" /translation="MLSFRIVKHGTNGTLCDTPFAPPGPGQIEIEIHACALNFADLLM IKGNYQDTPSLPFTPGLECAGRITAVGPQISNFRIGDRVAVFGGQGGLAEIGVFDAAR AVPIPDTVSYEDAAAALIAHGTSLLALEHLARLQPGERLLVTGAAGGVGLTAVEIGKL MGAEVIAQARGAEKLAVAKAAGADHLIDASDDLRQRVKDLGGADVVYDAVGGDTWEAA FRATNPGGRLLPIGFAGGAVPQIPANHLLVKNLTVFGFYIGGLIKLRPELGQQTFETL MRWLAEGRITPHISHRLPLSETDAGLELIRSRAATGKVIIQPQAGRVR" /product="oxidoreductase, zinc-binding dehydrogenase family" /transl_table=11 /note="identified by match to putative ortholog SPO2960 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(364100..365017) /locus_tag="Silicibacter_376" /function="COG: Transcriptional regulator" /translation="MRNLDITTLRSFVAVADTGGVTRAASFLHLTQSAVSMQLKRLEE MLGVELLDRSGRNIGLTSAGEQLLGFARKMLSLNDEIITRLTDQAFEGEVTLGVPHDV VHPVIPMVMQRFNVQFPRVKVNLCTSNTRDLKMDFAQGRFDLIVTTETTASEGGEVIH QMPLRWIGALGGQTWRQRPLRIGFCRNCIFRGLATAALDDAGIPWEMAVDSESDRTVE ATVSADLAVGVLLEGTQPAHQQVIDHGGSLPQLPVQHINLYGAERSRAQYVDHLASLI RQGFAGLSQPGLRAVGTEMVSAPVQLGVV" /product="transcriptional regulator, LysR family" /transl_table=11 /note="identified by match to putative ortholog SPO2961 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 365140..365352 /locus_tag="Silicibacter_377" /translation="MANCIEHSRPIPLRRPSLLSTITQMIALRRQRQHLDRLSDEQLK DIGVTRDQAEAEARRKAWDAPNFWLS" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Protein of unknown function DUF1127" /note="Hypothetical protein" CDS 365581..366360 /locus_tag="Silicibacter_378" /function="COG: Integral membrane protein, interacts with FtsH" /translation="MAQFDSIRSAAGARSAEIDAGLRAHMNKVYGTMSVGTLITFLAA WAIAGLSVTSDPANAVAQLSSDSYLTNFGYAIYASPLKWVIMFAPLAFVFFGFGAAVN RLSAAGVQVVFYAFAALMGLSISSIFVTFTGESIAQVFLVTSIAFAGLSLVGYTTKKD LSGMGSFLIMGLIGLIVASVVNIFLASSAMAFAISVIGVLIFAGLTAYDTQRIKNDYL QMAHAGDQEWLGKAAIMGALSLYLDFINMFMMLLQLLGNRE" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2963 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 366464..367003 /locus_tag="Silicibacter_379" /translation="MKIEPIGPDRAVRLVPLLEDLHAVHVAHHRDRYTPNPDPAHLSV WLSEWLAEPNVHALAAISPQEALMGYLIYDIEKRPALPVRPAETRAMLHHIAVAAPLR GIGVGKALMTQMKEDALAKGADVIGVTYAPFNAASAALMRHFGLEPVMTMAEWRRPSD EASQEPSQPTSETSPQEAI" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(367105..367269) /locus_tag="Silicibacter_380" /translation="MMRGVNMCKGWFAMKKLFGLSALLLLMPATVALTDHSKADVNLP APVAVEVAQL" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(367539..367706) /locus_tag="Silicibacter_381" /gene="rpmG" /translation="MAKPTTIKIRLNSTAGTGHFYVTKKNARTMTEKMTIRKYDPVAR KHVEYKEGKIK" /product="ribosomal protein L33" /transl_table=11 /note="identified by match to putative ortholog SPO2965 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(368428..369087) /locus_tag="Silicibacter_382" /function="COG: Negative regulator of beta-lactamase expression" /translation="MVSADPIWHPSPNFGARRDGLQPHLIVLHYTAMESAEAALQRLC DPAFEVSAHYLIGGDGRLWQMVAEDHRAWHAGQGEWAGLSDINSRSIGIELDNRGDHP FSEPQMCVLETLMAQIMTRWTIPATGVIGHSDMAPGRKWDPGPRFDWQRLATLGLARP NGQPLAAPAATPEALRKAAQACGFTAEVDDATLLQAVRLRYRPWARGPLCGEDIAPLL S" /product="N-acetylmuramoyl-L-alanine amidase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2967 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(369097..369861) /locus_tag="Silicibacter_383" /translation="MRVPAILVAVSAIALVACSPQVPDSAAGVGDATSPFNAPPEVEA GRTLNGDPLVPATQISDESTATNTNWQQPRPSGGAAASASDDIARETAAALSAAGQNS GRAPLEASPSNPAPALVGNPNLSDENSFEAVSARQTIESDAERIARQRAQYQVVTPTA VPDRPEDLAPNIVRYALSTSNPRGQRIYSRTGINLQARSARNCAEYPSADLAQTAFLE MGGPKRDRKALDPDGDGYACGWDPAPFRAAVRAAGN" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2968 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(369902..371389) /locus_tag="Silicibacter_384" /function="COG: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases" /gene="gatA" /transl_table=11 /note="identified by match to putative ortholog SPO2969 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="glutamyl-tRNA(Gln) amidotransferase, A subunit" /translation="MSDLNKLGLAEARDLLRKGDTTSVELTEACLKAIDGADALNAFV HKTPDVALDRAKAADARIAEGDAPAMCGLPIGMKDLFCTKGVDSQAASNILKGFKPEY ESTVSQKLQDAGAVMLGKLNMDEFAMGSSNETSAYGNAISPWRREGDETPLTPGGSSG GSAAAVAADLCLAATGTDTGGSIRQPAAFTGTVGIKPTYGRCSRWGIVAFASSLDQAG PMTKNVRDAAIMLEAMCGHDAKDSTSVDLAVPNFEAMLTGDIKGKKIGIPREYRMDGM PAEIAKLWDEGAAMLKAAGAEIVDISLPHTKYALPAYYVIAPAEASSNLARYDGVRYG HRATLAQGDGITEMYEKTRAEGFGHEVQRRVMVGTYVLSAGFYDAYYNRARKVRTLIK KDFEDVFAAGVDAILTPATPSAAFGLGEMNDEDPVKMYLNDVFTVTVNLAGLPGISVP TGVDTQGLPLGLQLIGRPWDEGDLLNTAYALEQAAGFVAKPAQWW" /EC_number="6.3.5.-" CDS complement(371393..371680) /locus_tag="Silicibacter_385" /gene="gatC" /translation="MSIDQSTAAKVAKLARIKVEEDALPALAEEFNTILGFIEQLNEV DVEGVEPMTSVTPQRLKRREDVVTDGNQQDKVLANAPDAREGFFAVPKVVE" /product="glutamyl-tRNA(Gln) amidotransferase, C subunit" /transl_table=11 /EC_number="6.3.5.-" /note="identified by match to putative ortholog SPO2970 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 372092..372784 /locus_tag="Silicibacter_386" /function="COG: Predicted Zn-dependent hydrolases of the beta-lactamase fold" /translation="MKLIWLGHGGFRLETGETTLLIDPWLTGNPMLEDSQHDAATQGA THILLTHAHFDHVADVLELAKHLSVPIVGQYDLMGYWGETEGVQTVGFNKGGTVTVGD TRVSMVPASHSNTFSTRDGLRTAGSEVGYMIRAEGKTLYVSGDTDIMADMDWMGDYYK PEIGILSAGGHFTMDMKAAAYAAQRYFAFKTVIPCHYRTFPLLEQSAQDLIDGLPGVN VIEPQIMKDIEL" /product="metallo-beta-lactamase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO2976 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 372784..373953 /locus_tag="Silicibacter_387" /function="COG: Xaa-Pro aminopeptidase" /translation="MPANDFTTTEYARRLEKTRRAMAAKGLKTLVICDPSNMAWLTGY DGWSFYVPQAVILHEDGMPMWWGRTQDKPGAALTTWLEADHLFDWPEEHVQHPDHHPF DSLVDLLREFGWTEAIGVEMDNYYYSARSHEILETAFGRDAFADATGLVNWQRAVKSE QELQLMQAAGKLSAHMHGVLRAEFNEGIAKNALVARVQAAGIEGLPLLAGDYPAISPI APSGIEASASHITWNDRPLAPGEATYFEISGCVRRYHCPISRTLFLGSPPEDIRRGEN AILQAIEDTFAVAKPGVTCEEVAACVYESFGRAGYIKGNRTGYPVGLSYPPDWGERTM SLRPGDTTKLEENMTFHLMPGLWTPDWGMAITETFVVTPNGGEPLADVPREIVVK" /product="peptidase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1140 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(374174..374776) /locus_tag="Silicibacter_388" /function="COG: 3-methyladenine DNA glycosylase" /gene="tag" /transl_table=11 /note="identified by match to putative ortholog SPO1900 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="DNA-3-methyladenine glycosylase I" /translation="MSRVVTGGDGRTRCAWSASAPEFDAYHDTEWGFPVGDDRRLFEK ICLESFQSGLSWRTILAKRENFRAAFDGFDYHAMAAYGPEKVAALLQDAGIIRHRGKI EAVINNAARAVEMEQSEGALAAFFWRYEVETPPEPQTVSTCPESVALSKELKTRGWKF VGPTTCFAFMQAMGLVNDHAEGCYCRPIAAAARQGFAKPV" /EC_number="3.2.2.20" CDS complement(374773..375066) /locus_tag="Silicibacter_389" /translation="MFVICLKLTADRERISGVLEAHKAWLAQGFEDGVFLLAGALDDG PGGLILAVGEDRAALEERLATDPFVRDGLVAVDITAFTPSQADPRLSFLKVAA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1901 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(375098..375667) /locus_tag="Silicibacter_390" /translation="MAQTRERIVAQADELFYTRGFEATSLADIAAPLGLSRGNFYYHF KTKDEILEAVIDLRLERTALMLRAWETESDTPLDRIICFIRILIQNRSKIMAWGCPVG TLVSELSKLEHVAHTHAAELFRLFIDWLAEEFRRAGRTQDAEALATHLMGRSQGVAAL AQAFADPALIEAEVQQMTDWARQQIAAPA" /product="transcription regulator, TetR family" /transl_table=11 /note="identified by match to putative ortholog SPO1902 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(375764..375862) /locus_tag="Silicibacter_391" /translation="MLLSMLWSGEENPRERLLLRQMLKVSQDGLLN" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(375865..376107) /locus_tag="Silicibacter_392" /translation="MRPPPEALLRRFDLRDPDWVAGTRHAQVWKVRLRSGDWGALKHY PAGHLSNEATGLLFLERANGERSRDAAPARSCTGRS" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(376104..376538) /locus_tag="Silicibacter_393" /function="COG: Cytosine/adenosine deaminases" /translation="MAEALDEARAAAARGEVPVGAVLVSPEGKVVARAGNRTRELNDP TAHAEVLAIRAACAALGSERLLGHDLYVTLEPCAMCAAAIAAARIARVYYGASDPKSG GVAHGACVFDHPQSHHAPEVYEGFSAAQSEALLRAFFALRRK" /product="cytidine and deoxycytidylate deaminase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO2983 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 376652..377920 /locus_tag="Silicibacter_394" /function="COG: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases" /translation="MLSPLSRIGYGSAMSKKTPSKPPARRAANAARPKATPSATPRAH KGLQAGAPADARPSQDGDRIAKVLSRAGVASRREAERMIAEGRVAVNGKVIDSPALNV TNLDRIVVDGNPLPEAEAPRLWLYYKPNGLVTTTSDEKGRKTIFDALPEDLPRVMTVG RLDLNSEGLLLLTNDGGVKRQLELPSTGWLRRYRVRINGRPQDHEFDVLRKGVVIDGE RFQPMTISLDRQQGANAWLTIGLREGKNREIRRAMEEVGYPVNRLLRISYGPFQLGTL KEGEVEELRPRVVRDQLGLAAPEGDGEAKKKPTRPGRGPRNPGAKTAGKGIGAPNARP TGKGAVKAPEGRVFSGKTFSGKTTGKTAGKPAAHKGQGGKPSGPKSFGTKQGGGSGAR GSGKPNGASGGASGGKFSPGGRRFGKKPQD" /product="RNA pseudouridylate synthase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO2984 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 378087..378995 /locus_tag="Silicibacter_396" /translation="MAQRFGGKYSPSGQDGARPDGRPTSSSRMTATARVNPVGLRANL MFVPAAVMMLFSLASGAAGLVLGLISAGLWAASAVMLREGLKAEAAYDDRKVARRPAL PRKILAASLCGLGGAVGAWSSEPGVITAALYGVACVGLHLAAFGLDPLSDKGVEGIDD FQSARVARVVDEAETHLAAMKDAVLRAKDRSVELRVDQFQAVARDLCRTVEEDPRDLT AARKYLTVYLLGARDATIKFADIFARSGSTEARADYLALLDDLEQNFAARNEKLLLED RGDLNIEIDVLRARLEREGVQLDRPS" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2985 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(377966..378088) /locus_tag="Silicibacter_395" /translation="MRQTPTIQPVPMPSIRINSATYATVCTSFAPKNVPQPLET" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 379018..380208 /locus_tag="Silicibacter_397" /function="COG: Uncharacterized protein involved in tellurite resistance" /translation="MSETIQQKAVEAETLVKEVTEVSLPDPKGELATLEAADPETTTA IRRRIDEIDMGDTNSIISFGSAAQGELQQISQAMLTDVRNKDVGPAGDSLREIVTTIR GFSVSELDVRRKPTFWERLLGRAAPFAKFTARYESVQGQIDKITDSLLAHEHTLLKDI KSLDVLYEKTLNFYDELALYIAAGEAKLAELDSTEIPALEAAVEAAAENDQVIKAQEL RDLRAARDDLERRVHDLKLTRQVTMQSLPSIRLVQENDKSLVTKINSTLVNTVPLWET QLAQAVTIQRSAEAANAVRDANNLTNELLTANAANLRESNKVIREEMERGVFDIEAVK QANADLIGTIEESLQIADEGKRKRAEAEADLKKMEAELRDTLAAAKARKDGVGDTAAT SVPK" /product="tellurite resistance protein" /transl_table=11 /note="identified by match to putative ortholog SPO2986 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 380168..381172 /locus_tag="Silicibacter_398" /translation="MGSATRRPPRFQSEPARVNPDTDTVLRPRPLGAVLAMGAALLLG GCLALAPGPKDTPRPTPRPVAPVYTPSVESQTLAKYYADLEQDLLTRGLLRTDGGGPE TPYDAEDLAERFETLAFYDEYASATDGGAGGMGRWERPVQLVPVFGPSVTPAQEARDR ASLTAYAARLARITGHPITVGTSGNFTVLFAGIDDADFVETKVRRLLPNLSDRDVALF ATPPRKFYCLVFAGGPQSDPLNYTRGVALIRAEQPNLMRESCIHEEIAQGLGLRNDSP KARPSIFNDDDEFARLTSHDEKLLQMLYDRRLRVGMSAEEARPAIERMAREVMGELSN " /product="lipoprotein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2987 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(381195..381818) /locus_tag="Silicibacter_399" /function="COG: Glutathione S-transferase" /gene="gstA" /transl_table=11 /note=", [EC:2.5.1.18] , Glutathione S-transferase, C-terminal-like" /note="High confidence in function and specificity" /product="putative glutathione transferase" /translation="MIDLYTWNTPNGRKVSILLEELNVPYTAHAIDIATGAQMAPAFL AISPNNKIPAIRDQETGVTLMESGAILIYLAEKHGQFLPPEQRIEIYEWLMWQMAGFG PMLGQAHHFLKYNRGASDYAEERYGAEARRLYGVLDRRLEGRDYIVNDYSIADMACWP WVSRYEWQDIDLRDFPNVRRWYQAIAARPAVQRGYHLPDHVNEIPQG" /EC_number="2.5.1.18" CDS complement(381928..383640) /locus_tag="Silicibacter_400" /function="COG: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]" /gene="iivG" /transl_table=11 /note=", [EC:2.2.1.6] , Acetolactate synthase large subunit (EC 2.2.1.6) (AHAS) (Acetohydroxy- acid synthase large subunit) (ALS)., Pyruvate decarboxylase, Thiamine pyrophosphate enzyme, C-terminal TPP binding domain, acolac_lg: acetolactate synthase, large subunit, biosynthetic type" /note="High confidence in function and specificity" /product="acetolactate synthase large subunit" /translation="MSSDTAQPASASRRSGGRVLADQLQILGADTIYCVPGESYLELL DGLHAHQESINVVTCRHESGASNMADAYGKLTGKPGICAVTRGPGATNASNGVHTAFQ DSTPMILLIGQVGREMVDREAFQEIDYRRMFGQMAKWVAQIDDAARIPEYMARAWKTA LSGRPGPVVLALPEDMLTDEVTVADLRVTPPARPAPAAHDIEALSAMIARAKKPMLMV GGPSWSEACADKALAFAERLGLPVTTSFRSQDYVNNGHDNYVGPVGIAPIPNLRKRLR EEVDLLITVGPRLGEMTTQGYELIDIPHPQMTFVHVHPGAEELGQVYQPDLAIQSDPE LFFDAAEAITLPSQPEGWADWVQQQRADYLAFQTPTEVPGDVNMGHVVRHMSETLPED TIYTNGAGNYTVWLHRFHQHRAYRTQLAPTSGSMGYGVPAAVAAKLAHPDRTVVAMAG DGCFMMTSQELATAAQHGADVIYVVVNNGMYGTIRMHQERHHPGKVMATKLVNPDFVA YAASFGIAGERVLRTEDFPAALERARTTKGGYMIEIVVDPEALTPNQSLSAVRAEGQG KANA" /EC_number="2.2.1.6" CDS complement(384212..386452) /locus_tag="Silicibacter_401" /function="COG: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)" /translation="MVENTESESRKLLGRLREAMAGDDAGQARLDKITQLIADSMGTE VCSIYLFRDEDTLELCATEGLNRESVHQTRMRVGEGLVGRVARTGKVINTPDAPSARG FRYMPETGEERFSSFLGIPIQRLGEMMGVLVVQSKESREYSADAVYALEVVAMVIAEM TELGAFVGEGSAMSPLHQQSVLLKGIAAQEGAAEGNIWLHEPRVVVTNPIADDPHREL ERLQEAVEELRVGVDKMLQVSSNGDKEQAQVLETYRMFANSKGWMRRMEEDIARGLSA EAAVEKEQSLARGRMAQVQDAYLRERLSDLDDLSNRLLRILTGQGKDTGAELPENPIL VARNIGPAELLEYGRSLKGIILEEGSVGSHAAIVARALAIPLVVRVARITTEGLNGDH VLVDGDNAVVHLRPDDPVVSAFRDKIAMQAKAQERYSSIREKPAITVDGKRINLMMNA GLMADLPSLENSGAEGVGLFRTELQFLVRNQMPKRSELKGLYQRVLEAAGGKRVVFRT LDIGSDKVLPYMKPTDEPNPALGWRAIRVGLDKPGVMRMQLQALIRAANGGPLTVMFP FVAQFEEYRLAREEVNKTIERERRLGHVLPSTLEIGAMLETPSLGFAPLKFFEEVDFL SIGGNDLKQFFFAADRENERVRRRYDTLNVSFLSFIERIVERCDISGTPLSFCGEDAG RPIEAVCLAAMGIRTLSMRPASIGPVKSLLMRVDLGELRKIISDARHRGDQTVRPAVM QYLREL" /product="phosphoenolpyruvate-protein phosphotransferase" /transl_table=11 /EC_number="2.7.3.9" /note="identified by match to putative ortholog SPO3034 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(386798..388036) /locus_tag="Silicibacter_402" /function="COG: Aspartokinases" /translation="MPLLVMKFGGTSVANLDRIRRAAKRVGVEVAKGYDVIVIVSAMS GKTNELVGWVGETSPLYDAREYDAVVSSGENVTAGLMALTLQEMDVPARSWQGWQVPL KTNSAHSQARIEEIGTENINQKFGEGMKVAVVAGFQGISPEGRITTLGRGGSDTTAVA FAAAFGAERCDIYTDVDGVYTTDPRICEKARKLDKIAFEEMLELASLGAKVLQTRSVE LAMRYKVKLRVLSSFEEQSDEAGTLVCDEEEIMESNVVNGVAYSRDEAKLTCLSVADR PGIAATIFGCLSDAGVNVDMIVQNISEDGRTDMTFSCPTDQVQRAEMALNAYKEKGEL NFAELVADTGVAKISVVGIGMRSQSGVAAKMFKVLSDEGINIKVITTSEIKISVLVDR KYMELAVQALHDAFELDKAS" /product="aspartate kinase, monofunctional class" /transl_table=11 /EC_number="2.7.2.4" /note="identified by match to putative ortholog SPO3035 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(388171..389619) /locus_tag="Silicibacter_403" /function="COG: Trk-type K+ transport systems, membrane components" /gene="trkH-1" /translation="MLDLRPVGYVIGLLVVILGGTMVFPLLLDLYDGKGEWPVFLESA LFCFLVGGVLALTCANGVGRGLSIRQTFLLTTLVWVVLPIFGALPLMLGATELSFTDA FFEAMSGLTTTGSTVISGLDDLPRGLLLWRGILQWLGGIGIIVVAMVFLPELRVGGMQ IFKSEAFDTMGKILPRAQEIAKQISVIYLVLTLVCALVYTVLGMGLFDAVVHAMTTMS TGGFSNYDASFGTFSGPAEYAAAIFMVVAALPFVRYVQMVNGKTLPLFQDSQVRAFMA TILLLVAITAGVLVTIFPHHPEQAVREALFNIISIMSGTGYASVDYMAWGPFLIMIFF FIGLIGGCAGSTACSVKIFRYQLLFASIRVQVQRIRSPNGVFVPRYEGRPVTPDVLSS VISFFMFFVITLGIVAWALALTGLDFITAISGAATAVANIGPGLGDIIGPAGNFAPLN DTAKWILAIAMLIGRLELMAVYAILTVRFWRS" /product="Trk system potassium uptake protein TrkH" /transl_table=11 /note="identified by match to putative ortholog SPO1353 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 389683..389958 /locus_tag="Silicibacter_405" /translation="MSSVLCAAVAGIAGGADGARGRLRAGACVVPEAAAAPSGRDTSF TSGAVFCSAAAGVSALAFVAGGVLRAELSAGDAGAATAVGCPDAEAG" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(389667..390434) /locus_tag="Silicibacter_404" /translation="MIRFEGFKDIPTTPQAWAGYALGRQLRMMRALATLAADAPQRQL EMTQALLKAQQEWISGLPNATAAVGEDAVAPARKPPEPRKPAARKPAARKVSTPTAST KTTSRKTTASKATSTKASSAKTAAPQTPAPKTPGPKTPAQKAPARKTTARKAAAAKAQ PASASGQPTAVAAPASPAESSARKTPPATKAKADTPAAAEQKTAPEVKDVSRPEGAAA ASGTTQAPARKRPRAPSAPPAMPATAAHNTEDTKSES" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(390660..391763) /locus_tag="Silicibacter_406" /translation="MNIHSRDVNETPDRSDAEQALAVLRRWAGEASETEVAQLDPAIA RLLPGQELQNYPDLKRQYPDDFDANESYRATLPDLQNGPSSLIRGAKEQIQHVGISNF RLPIRFHTRDNGDLTLETSVTGTVSLDAEKKGINMSRIMRSFYKHAEKVFSFDVMEAA LEDYLSDLESGDARLQMRFSFPVKVQSLRSGLSGYQYYDVALELVQMAGQRHRIVHLD YVYSSTCPCSLELSEHARQARGQLATPHSQRSVARISVQMEQDGGCLWFEDLIDHCRR AVPTETQVMVKREDEQAFAELNAANPIFVEDAARLFCEALQSDARVGDFRVVASHQES LHSHDAVSVLTQGTMFAAPSLDPQLFSTLIHRG" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1352 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(391965..393152) /locus_tag="Silicibacter_407" /function="COG: O-acetylhomoserine sulfhydrylase" /gene="metZ" /transl_table=11 /note="identified by match to putative ortholog SPO1351 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="O-succinylhomoserine sulfhydrylase" /translation="MTESWNKRTKLVHGGTRRSQYNEVSEAIFLTQGFVYDSAEQAEA RFIETGADEFIYARYGNPTVAMFEERIALLEGAEDAFATASGMAAVNGALTSILKAGD HVVSAKALFGSCLYILENILTRYGVEVTFVDGTDLDQWRAAVRPDTKAVFFESMSNPT LEVIDIEGVAEIAHAVGATVVVDNVFSTPVFSNAIAQGADVVVYSATKHIDGQGRALG GVVLGTKDYIRGTLEPYMKHTGGSLSPFHAWMFVKGLETIDLRVNAQAASALKIAEAF ESHPVLARTIYPGLKTHAQNALVQRQLGGKGGTVLSLDLKGGKEAAFAFLNALSIPVI SNNLGDAKSIATHPATTTHQRLSEAQRAELGITDGLVRFSVGLEDADDLIADLSQALQ TLA" /EC_number="4.2.99.-" CDS 393618..394559 /locus_tag="Silicibacter_408" /translation="MAVIRINAVGDTPVVHARPGPLEEEIARLGPLEGPVIVMIHGYS YKPGLPAHCPHRHILSLDPHHMPWLAPSWPRQLGFGMGRGDEGLAVAFGWNSRGRLAA AQARAIDAGRALARLVEVLHRQAPARPIHLIGHSLGSEVVLRALKDLPVGAVERVISL SGASYQSVATSALTTPAGRAVEFFNITSRENDTFDFLFETLTRRPNRNDRAISKGISA PNAVTLQIDCLETLEQLSRMGHPLGLPERRVCHRSTYLRPGALRLYRQLMRHPEQIPL TRIQSSVPTAPEPRWSRLLRLRPQPGAVPIWQRIELG" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(394756..395391) /locus_tag="Silicibacter_409" /gene="ispZ" /translation="MSEQTSDPSPAARKISPLVKNLLEFGPVVLFFVAYLRLKDQVFE IGGTSYEGFIVVTAGFVPLMILSTLILWRLTGKLSRMQVMTLVLIVVFGGLSVWFNDE RFFKMKPTMIYLLFGGMLGVGLLRGQSYLRVVMEEMMPLQDEGWMILTRRLCAFFFGL AVANEVIWRMMSTETWVYFKTFGLTAAMFLFFMTQARLFQIYGLEEQGEAE" /product="intracellular septation protein A" /transl_table=11 /note="identified by match to putative ortholog SPO1336 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(395436..396344) /locus_tag="Silicibacter_410" /function="COG: Permeases of the drug/metabolite transporter (DMT) superfamily" /translation="MLSEWLISLEGTEAGHQVALILAVSAAFLHAVFGALQKGRHDPW LSRGAIDASYGLMAAPFALFVVPWPEPHMWLIFLGVWAIHVVYKILQAMAYTKGAYTV VYPVVRGTGPLFAVIGAYLLFGETFTLVQWLGVGVLLAGIFGLAVYNYIFLVTARETL GIALLLALATGLFVALYTTYDAYGIRATADPFTFLAWFFMIDGMTMPIYAYWRWRRMG TDRPTVGPLMLRGFFGGLVAFASFGSIMLATRLDKVGEAAVLRETSTVFAALIGWLVL KETVGPRRIALMALIAAGAVIVEMGG" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1337 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(396403..397563) /locus_tag="Silicibacter_411" /function="COG: Signal recognition particle GTPase" /gene="ftsY" /translation="MALFSKLKERLLKSSSRLGKEVDAIVEEGAVAPEQAPDPAPETA SPAAPAAQPAERAPGPEPIEAPAARASTSAPAPIVPSAPAEAPEASRPGLLGRLMGRT KPSEPRRVLDDDMLESLEEMLIASDMGVDTALRVTANIAEGRMGRRVSGREIRELLAA EIARVMEPVARPMPLYPSKPQVVLVVGVNGSGKTTTIGKLASQFRAAGKSVVIAAGDT FRAAAVEQLQVWGDRAGVPVLTAPEGSDPASLAFDAMTKAEADGADLLMIDTAGRLQN RADLMEELAKIVRVIRKKDPNAPHNTLLVLDATTGQNALSQVETFRQLADVSGLVMTK LDGTAKGGVLVALADKFGLPIHAIGVGEQIDDLSPFDPEEFAAALTGLEEGA" /product="signal recognition particle-docking protein FtsY" /transl_table=11 /note="identified by match to putative ortholog SPO1339 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(397637..398290) /locus_tag="Silicibacter_412" /translation="MINESAMMLETVTLLLAGGFALGYLWQVHADESWSRSGFKTASV LSLALVAGLSTPLLAVALGLCAFGDLALSRPGERAFLAGVGSFAGGHLAYVGLFLSLP DADVTRLWTAPAGWAVIALAGVALAMMSLLARFAGEMRVQVMAYVPVIVAMGLAALTL PTPLIWCAAVMFMISDMVLAVETFVLPPAHPARRLTAPVIWLLYWGAQALFFAVLIL" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1340 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 398428..398838 /locus_tag="Silicibacter_413" /translation="MFSYSLSRTALVLGLALLSAVPLSANDAEEFNSYTQGRTIHFSW EGQAYGAERYLPGQRVIWSFLDGRCVTGEWYMQSGDICFVYEDRPEPQCWRFDIGDNG LSVSIARDDGSVLTLRERLSVRDEMVCLGPEVGV" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1342 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(398907..400415) /locus_tag="Silicibacter_414" /function="COG: Exonuclease VII, large subunit" /gene="xseA" /transl_table=11 /note="identified by match to putative ortholog SPO1344 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="exodeoxyribonuclease VII, large subunit" /translation="MSDLLDDPTPGQNAPEFSVSEISGEVKRTLEGTFGRIRVRGEVG RVFKARSGHLYYDIKDDRSVLACTTWKGQISGLSVVPEEGLEVVVTGRLTAFGGQSKY NMNVDEVAVAGQGALMALLEKRKAQLAAEGLFAPERKKPLPYLPGIIGVITSPSGAVI RDILHRLRDRFPRKVLVWPVAVQGSNSAPEVARAIDGFNALTPGGALPRPDLIIVARG GGSIEDLWGFNEEIVARATAASDIPLISAVGHETDTTLIDYVSDLRAPTPTAAAEHAV PVRLELLGWVENQGARMANAASRAVQLRRQRLGDMARALPRPDTLLETPRQRLDRVSD RLPNALISGVQRRKLTLSDRAASLRPATLRGLVSSRQDKLKNLSSRLTLRPITQDLGR KRDALDRITKRLNTAQSSRIDRQIDRLSATARQLDILSYKATLRRGYAVVRDGAALVT STEGARKAAELSIEFADGTFDVASAPSTTKKSAPKPAAPKAPKTPGEQGSLF" /EC_number="3.1.11.6" CDS 400568..401830 /locus_tag="Silicibacter_415" /function="COG: Phosphoribosylamine-glycine ligase" /translation="MNILILGSGGREHALAWAVMQNPKCDRLIVAPGNAGIAQIADCA SLNAEDGGAVVTFAEENAIDFVIVGPEAPLAAGVADRLRDAGILVFGPSEAAARLEAS KSFTKEICDAANAPTAGYGHFTDAEAAKAHVRANGAPIVVKADGLAAGKGVIVAMDEQ TALDAIDDMFGGAFGGAGAEVVIEEFMEGEEASLFVLCDGEEILSIGTAQDHKRVGEG DTGLNTGGMGAYSPAPVLSAEVEAKAMEEIVKPTMRVMAERGMPYQGVLYAGLMIKDG QPRLVEYNVRFGDPECQVLMMRLGAQALDLMQAAAEGRLADARVNWADDHAITVVMAA AGYPGSYEKGSEIKGLDALPEDSMNMVFHAGTKADGDKILANGGRVLNVTARGESLSE ARDRAYAMVDQIDWPEGFVRRDIGWRAL" /product="Phosphoribosylamine--glycine ligase" /transl_table=11 /EC_number="6.3.4.13" /note=", Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase)., Phosphoribosylglycinamide synthetase, Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain, purD: phosphoribosylamine--glycine ligase" /note="High confidence in function and specificity" CDS complement(402301..403098) /locus_tag="Silicibacter_416" /translation="MGSGGKARRLRARVLPPILRRAAQILSVSLAVLAQAAPGAAREH WRVLGAEFSEPTTRYGHAVLGDDVEYGSLLIRRVETGSTATQTLEIKLPLTHVFEDLE PRLWDVTGDGLPEVVVIETDMSRGAQLAVYDAEGNKRAATPHIGQRNRWLAPIGAADL DGDGHIEIAYIDRPHLAKTLRIWRYEGHNLVEVASATGLTNHKIGQDFITSGLRDCGA GPELITVSAGWSRIITSRLEGGAVISRDLGPFDAEKGLRATLACAAN" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1347 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(403098..403490) /locus_tag="Silicibacter_417" /function="COG: Ferredoxin" /translation="MGLARCRRQRYTRYRVPKKGRRIMAKITYIEHNGTEHVVDVANG LTVMEGARDNNIPGIEADCGGACACSTCHVYIAPDWVEKLPAKDDMEEDMLDFAFEPD AARSRLTCQIKVTDALDGLVVHMPEKQI" /product="iron-sulfur cluster-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO1348 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 403558..404274 /locus_tag="Silicibacter_418" /function="COG: Membrane-bound lytic murein transglycosylase B" /translation="MVKAALTRFACAANWSSVGANRDKACAAPNLAPKTKDSPEHMPA SPSQHPAASGLRSASRSAFSPIGSPLPSALRRHALLWVAAALLAGCMTPAPFERVGRP APPGAPPGTCWEPVIIPARIETITEQVMVSPAEAGTDGNAGKPAVFATETRQVITRPR EETYFQTPCPEELTPEYISSLQRALAARGLYVGDITGRLDVDTRAAVRAYQQSLDIQS DTLSLQAARSLGLSAVALDD" /product="lipoprotein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1349 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 404403..405071 /locus_tag="Silicibacter_419" /function="COG: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases" /translation="MAAAPLPASSFLSGASERLRAMLDSQATDVHLETGDVLFERGDE GDALYAIISGALEISTLSAAGRKLSLDMMRPGAIFGEIAMFDPGERTATATAAEPSHL RRLRHRDVLAQLTKHPELAGDMLKLAGQRMRWMNTQLNEQVFLPMPVRLARKLLYLTP ADGNGQLSLSQSELAEFVGATREAVSKTLSNWRKAGLIEISRGGLHLKDRGGLAVLAD PEGI" /product="transcriptional regulator, Crp/Fnr family" /transl_table=11 /note="identified by match to putative ortholog SPO1335 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 405646..406773 /locus_tag="Silicibacter_420" /function="COG: Predicted integral membrane protein" /translation="MPFRVLHFAEPEETVFAEGISEDITTELSRFHAIRITSRMSSFQ FNASERPAQEIATTLGADFILSGTVRRALNRIRVVVELYETLEDRQIWSERFDRADAD IFAVLDEISGLVAACMTGEVQLAETRRTKAKAGQDLTAYEALLVGQDLHKSGDISPRV ATRAVAAFSEAIDAAPDFARAYAWRACSFSRTWDFPVRQDQFDQVSQDVFKALEFDPA EAEAHRIAGAVCRALHEFDRATLHIEKALELNASDAHIAAKSAEHFAFIGQPQRAHDL INKAMALNPMFSGWYWEIIALADYVASQYEEALAAITRAASPTFAGFAYQVGSLLALG RTEEAKEAVALLKAQYPDVTLAVYQRDGRRFAFADGQPQKV" /product="adenylate cyclase" /transl_table=11 /EC_number="4.6.1.1" /note=", [EC:4.6.1.1] , Putative adenylate cyclase 3 (EC 4.6.1.1) (ATP pyrophosphate-lyase 3) (Adenylyl cyclase 3)., Protein prenyltransferase" /note="High confidence in function and specificity" CDS complement(407171..408670) /locus_tag="Silicibacter_421" /function="COG: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain" /translation="MHPISSSKAIGRARVHEGAHSGWRLFWISVLGTALLVMQSLSAA ARPESLAPLAEKVSPAVVNITTSTVVEGRTGPQGIVPEGSPFEDFFREFQDRNGGGTR PRRSSALGSGFVISEDGYIVTNNHVIEGADEIEIEFFPGEGQPADLLPATVVGTDPNT DIALLKVDAPMPLSFVKFGDSDKARVGDWVVAMGNPLGQGFSLSAGIVSARNRALSGS YDDYIQTDAAINRGNSGGPLFNMDGEVVGVNTAILSPNGGSIGIGFSMASNVVTKVVS QLKEFGETRRGWLGVRIQDVTDDLAEAIGLASDEGVLITDVPEGPAKEAGLLARDVIT SFDGFEVKDTRDLVRRVGDTEVGKTVRVVVFRDGKTETIRVTLGRREDAVGNGTEGGG AEAVPDEGEKELLGLTVGVVRDDMREDLNLDAGTTGLVILSVDETSGAWEKGLRAGDV ITEAGQNKLSSIADLEAQIAAAEEGGRKSIFLMVRRAGEPRFVALNLED" /product="periplasmic serine protease, DO/DeqQ family" /transl_table=11 /note="identified by match to putative ortholog SPO1333 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 408948..409634 /locus_tag="Silicibacter_422" /translation="MQRAHHIARSDCPVTPPSGAPRLKGPPPRETCRPRALSRDDVSR SVGADHFKRRTMPSVTLSYKTQDFIEAQKLSTRQSWRDKKRWALLALGSVAAVALLTF TTEPPQRGEMLKIASLLMPSALIGGLWLSQRVSIALHGRRALTASPALRSEFTYEVQP EGLIQRSQHGEAIVKWTEVQAVSEDRKSWLIYPAFLPAQSYLLPKRCLTADFQEALKA QLMAAGAPRK" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(409744..410628) /locus_tag="Silicibacter_423" /function="COG: Membrane protease subunits, stomatin/prohibitin homologs" /gene="hflC" /translation="MNRSVILLVLLGAIVVGALSSLFIVDEREKALVLRFGRVVNVQE DPGLAFKLPFVDEVVKYDDRILSLEVGPLEVTPLDDRRLVVDAFARYRITDVRRFREA VGVGSEAAAESRLDNIMRDQTREVLGTVSSNDILSSDRAALMLRIRNGAIAQARDLGL EVIDVRLKRTDLPQANLEATFARMRAEREREAADEIARGEEAAQRVRAQADRTEVELV SEAEREAEVIRGEADAERNNIFAEAYGADPEFFEFYRSLTAYARALQGGNSSLVLSPD NEFFNYLKSSDGAGRVQQ" /product="HflC protein" /transl_table=11 /note="identified by match to putative ortholog SPO1330 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(410628..411791) /locus_tag="Silicibacter_424" /function="COG: Membrane protease subunits, stomatin/prohibitin homologs" /translation="MAGNSGGPWGGGGSSGGGGNRGNNGGNNGGGGGGRRPDDGQIPE IDELVKKGQEQLRVLMGGRGGNGGNGQGPQGGGSGGSPLFTKGGLMLGAVAAVFLWGY NSFYTVKTEEKSVELFLGEFSAVGNPGLNFAPWPVVTYEVVPVSVEQTESIGAGARGS DAGLMLTGDENIIDVDFQVVWNINEPDKFLFNLRDPKATIQAVSESAMREIIAQSQLA PILNRDRGLISQRLEELIQSTLDSYDAGVNIVRVNFDGADPPEPVKDAFREVQSAGQE RDRLEKQADAYANRKLAAARGQAAQTLEEAEAYRAQVVNQAQGEASRFTAVLSEYEKA PEVTRKRLYLETMEDVLSRVDKIILDDNAGSEGGQGIVPYLPLNEIRRSGGSN" /product="HflK protein" /transl_table=11 /note="identified by match to putative ortholog SPO1329 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(411900..413255) /locus_tag="Silicibacter_425" /function="COG: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes" /gene="gor" /transl_table=11 /note="identified by match to putative ortholog SPO1328 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="glutathione-disulfide reductase" /translation="MSFDYDLFVIGGGSGGVRAARVAAAGGASVALAEEDRYGGTCVI RGCVPKKLMVFASEYSGMVEDGRAYGWDLENKGFDWDHFKQKLNTELDRLEGIYRNLL KNSGVESFDARAKLADAHTVELSDGTRKTAKHILIATGGRPWVPEFPGSELAITSNEM FHLEKLPESILIVGGGYIASEFAGIMNGLGVKTTQYYRGAQILRGFDDEARGLVAQEM IQSGIDLKLGTNVLEMRREGDKIWVKATNGDEGLFDQVMFATGRKPNADNLGLEELGI ARGRGGEIEVDQYSQTAVPSVYAIGDVTDRVNLTPVAIREGMAFVETVFNGNPTSPDH DLIPTAIFTQPEMGTVGLSEEEAAKQETIEVYATSFKPMQQSFAGRAQRVLMKLIVSQ ATRKVLGCHIVAPGAGEMIQLAGIAVKMGATKEDFDRTVAVHPTMSEELVTLKTPVRT I" /EC_number="1.8.1.7" CDS 414208..414648 /locus_tag="Silicibacter_426" /function="COG: Predicted membrane protein" /translation="MRSPLDRLRHALSFEIIALLLIVPLGAAVFHFPLHAIGAVGIVS ATLATLWNLIYNWGFDAILQHWRGSTLKTPMLRVLHAVLFEGGLLIVLMPFIAWYLQV SLWQAFVMDVAFALFYMVYAFGFNWAYDRLFPLKEWQEDHAAQH" /product="putative membrane protein" /transl_table=11 /note=", Bacterial transmembrane pair, Bacterial Transmembrane Pair family" /note="Hypothetical protein" CDS complement(414713..415501) /locus_tag="Silicibacter_427" /function="COG: Ribose 5-phosphate isomerase" /gene="rpiA" /transl_table=11 /note="identified by match to putative ortholog SPO1327 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ribose 5-phosphate isomerase" /translation="MSGDLSPIDKAKFVAAKRAAELVEDGMRVGLGTGSTAAWLVRCL GEMVREDGLKITGVPTSARTAELAREVGIELITLDEARWLDLTIDGADEFDSELNLIK GGGGALLQEKIVATASDQMVVIADKAKEVETLGAFPLPIEVIPFGWQTSQALVEETLI SMDVMGRSSTLRMNGASPYVTDEGNHILDLHLNRIGNPRQLALVLNQIPGVVENGLFI DICDTVVIGYGDGKVEVRDINEGTIETDRIDFVETDNLFADLND" /EC_number="5.3.1.6" CDS 415834..416541 /locus_tag="Silicibacter_428" /function="COG: Glutathione S-transferase" /translation="MTKVLRLHYAPDNASLIVRLALEELGLPYECQLVDRRKAAQKSA AYLQLNPNGTIPVLETPDGPLFETAAILLWLADQNAALAPQPGSAQRGAFLTWLFWCS NTLHADLRQYFYPEKIIGPEETHQDQLRRVLQSRLHQHLGMIDTALVRTPGLTDEADP TLLDLYLPCLLRWTKLYANRGPKPWFDLTSYPALHALCHRAEGRASTKAAQTAEGLGP TPFTTPKFATPPEGSAT" /product="glutathione S-transferase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1324 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 416542..417915 /locus_tag="Silicibacter_429" /function="COG: L-serine deaminase" /gene="sdaA" /transl_table=11 /note="identified by match to putative ortholog SPO1323 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="L-serine ammonia-lyase" /translation="MFLSVFDMFKVGIGPSSSHTMGPMVAAARFLDMMRASPFDFHGL RASLHGSLAFTGVGHATDRATILGLAGFLPDTYDDDKAEAALAAITETKTIVLEDLGT LRFDPKADMIFDYDHALPGHANGMVLMALDAQGDVTLRQVFYSVGGGFVLTEEELAQG KATDEGDPVPYPFKSAAEMLEMAKTSGLSIAQMKRANEVSRGCEQSFAKGTQRLWQVM NDCINRGLERDGILPGGLSVRRRAKGIYDALMAERGMNLTAPHTINDWMSVYAMAVNE ENAAGGQVVTAPTNGAAGVLPAVLRYYLDHVPGASEKHIEDFLLTAAAIGGLVKYNAS ISGAEAGCQAEVGSASAMAAAGLCAVMGGTPEQVENAAEIALEHHLGMTCDPVKGLVQ VPCIERNGLGAIKAVSAASLALRGDGQHFVPLDAVIETMRQTGADMHEKYKETSLGGL AVNVPNC" /EC_number="4.3.1.17" CDS 418623..419498 /locus_tag="Silicibacter_431" /function="COG: Predicted alpha/beta hydrolase" /translation="MSQAPNVVSFGSSQAPLVGKWHPAHGPQRAAMVVHGATGVPQRF YRHFAHWAAQQGIATLTYDYRDFGESLTGATRSSPARMADWAVADQDAAQHKLAELAP TGPLWVLGHSLGGLGIAFHRYPERVSRVITMGAGMTHYRDHPWHYLPKALAFWFLIGP VATGALGYLPGRRLGFGEDLPSGVYWQWRRWCTRRDFFARDIGKSLPQPNFNATEPPL ELCVARDDDMVPPAAVRRYAAHFAPDRTQLRLFDPANYGLGTLGHVGCLGAGCEAAWQ DLMFPDAAEARTGAA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3544 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(417969..418631) /locus_tag="Silicibacter_430" /function="COG: Transcriptional regulator" /gene="yxaF" /translation="MGHGRPLKMTRPVGLIIGVDQSVYCGYCFFMKTPDTRLTLIKTA SKLFRRKGYSGVGLSEILTAAGLPKGSLYHHFPGGKPELAAAATRWAGAWIESLVQRS FEGAETFEEGAQAACRDLAATLVQVDHIEACPVLSVLQAASDTPVLQEAVQEVYARWT AELAREARRLGRAQPDAVAQSLHIRLQGAWVMAYAQQSQAPFLHLADEIAAEAARNPA EP" /product="similar to unknown proteins" /transl_table=11 /note=", Homeodomain-like, Bacterial regulatory proteins, tetR family" /note="Hypothetical protein" CDS 419580..420554 /locus_tag="Silicibacter_432" /function="COG: Permeases of the drug/metabolite transporter (DMT) superfamily" /translation="MTQTSATPDTTDRPLLGIALMLGFCALIPLGDAVAKLLSTRIPV GQIVFVRFAAQGVILAPVALMLGISLRLPRRILPIVLLRTLLQMGGITAMFMALRFLP LADAVAIAFVMPFIMLLLGKYVLKEEVGLRRLLACVVGFAGTLLVIQPSFAAVGLNAL WPLAVAVIFAVFMMVTRTIARDTDPIAIQAVSGGIASVLMAILFVLGAQFEVAELATN LPARPEINLLLLAGLFGTIAHLLMTWSLRYAPTSTLASMQYLEIPVAVFVGWLFFAEL PNTIAACGIALTMAAGLYAVMRERQVSRAARKVDPTPISKTGLPASPE" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1322 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(420520..421191) /locus_tag="Silicibacter_433" /function="COG: Thiamine pyrophosphokinase" /translation="MTEAIVRETAPITLIGGGDVTRSDLAEALAHAPVLVAIDGGADQ ALALGAQPQAVIGDFDSVSDHARTALSQSILHLVAEQETTDFDKALRSVEAPLVLAVG VLGARLDHQLAALHVLMQPHAKTCILIGAHEVVVHLTASLELELQAGDVVSLFPLLPV SGRSDGLEWPIDGLELSPLSRIGTSNRATGSIRIEVDGPGLLAILPRHCLGALIQVMQ AGPSC" /product="thiamine pyrophosphokinase" /transl_table=11 /EC_number="2.7.6.2" /note="identified by match to putative ortholog SPO1321 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 421329..423527 /locus_tag="Silicibacter_434" /function="COG: AAA ATPase containing von Willebrand factor type A (vWA) domain" /translation="MVQNNKVLTVSYGTFSCTLEGFEDSFDTMKAIAEYFRDLAADDR YFGAEPPQPDAEMMARIAQREIARQVEARSGEGGIHLRAAAPATAPTAAPAPAPASVA PPAPAAPEEDQSTAPAVARTDDLTSDSPRTTPEAAPQMQPAVLNEAPDAPVATVPVDV SEDVAEPEAEDTVPAADSIAAKLQRIRAVVAKAPHQDEEFIEDEHADAVETDASDLAA ETTAELYEDHYDGEEDAEDADVASDEETVSDILDRLDLTGTRRKAETDDRADTAHGDT AEEPAPSQEDTEAQAEAQPAAAERPQRPRTIRVMPKRATSETEGPAEAPSDTPETAST AKATPKPAPPLRLGDDTAVSVPSGEQPSNEQAASEAAPSEPVRPRRPVRGRVIRVKRA QADESLIDATAEDVTPRQRPEATPPVSTSLSEDDEAELMAELAAVEAELMASTTDTDE VPEQDETDGEDAFDDGGPAVAPAAPAAPRATERPAREILTSRGGSPDGDVSRLMAAAD DRLSDEDAASSRETYNQLRAAVAAAQADPGDSDEQRREARTRAFRDDLASVVRPSRAA SAEPGSGRGTATSRPAPLKLVAEQRIDPAPQENTPTMAPAAASAPVRPRRVSSVLAAS EEEDAAPATRQQDGAFASYASEKGAVELHELLEAAASYMSFVEGRESFSRPQLINKVR TLDGQSDFNREDSLRFFGQLLREGKLKKASNGRFSVSSQIGFRPGNRAAG" /product="lipoprotein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1320 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(423880..424125) /locus_tag="Silicibacter_435" /translation="MAKEGLSYRARRIWALVILLVGMPLYIVLAVTILNLLDRPPIWL ELLVYVGLGVAWVLPFKFVFKGVGQKDPNALYDEHPD" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1317 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(424125..425438) /locus_tag="Silicibacter_436" /function="COG: Adenylosuccinate synthase" /gene="purA" /transl_table=11 /note="identified by match to putative ortholog SPO1318 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="adenylosuccinate synthetase" /translation="MANVVVVGAQWGDEGKGKIVDWLSERADVIARFQGGHNAGHTLV IDKKVYKLHALPSGVVRGGKLSVIGNGVVLDPWHLMKEIETVRAQGVEITPETLMIAE NTPLIMPFHGELDRAREEAASKGTKIGTTGRGIGPAYEDKVGRRAIRVADLADDATLE ARVDRALQHHDPLRKGLGVEPIDRDALVAQLKEIASEILPFAAPVWKVMNEKRKAGKR ILFEGAQGALLDIDFGTYPFVTSSNVIAGQAATGVGIGPNSIDYVLGIVKAYTTRVGE GPFPTELLGADGKPDADGERLGTRGHEFGTTTGRQRRCGWFDACLVRQTCATSGINGI SLTKLDVLDGFETLKICVGYELDGERLDYLPTAADQQARCKPIYEEMEGWSESTEGAR SWAELPANAIKYVRRVEELIQCPVALLSTSPERDDTILVTDPFAD" /EC_number="6.3.4.4" CDS complement(425708..426070) /locus_tag="Silicibacter_437" /translation="MTVPETKLNTADQMQRPEPAFEAPWHAQAFALAVHLNESGRFTW PEWVERFSAALKEAGLSRELNGGDDYFTVWLATLERLMSDQGHTDPAEVARVREDWAE AYLSTPHGAPVHLPEGRG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1316 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(426067..426771) /locus_tag="Silicibacter_438" /gene="nthB" /translation="MSRIHDMGGRYGDGPITPEPLDAPVFPEDWHGRALAVTLACGAL GQWNIDISRHARECLSPSDYMNFSYYEKWLAALADLLVAQGVLRREDLSDVDEAANDS DAAEPAHPLAERCLSADRVAAVLAAGGPADRKSPVAAQYQPGDFVRTRLSGNRLVAGG HTRLPTYASHAQGQILRLHGTHVFPDSNAHGQGEAPEPLYAVAFAARDLWPQAEHPND EVVLDLWQSYLEPVSS" /product="nitrile hydratase beta subunit" /transl_table=11 /EC_number="4.2.1.84" /note="identified by match to putative ortholog SPO1315 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(426768..427982) /locus_tag="Silicibacter_439" /gene="nthA" /translation="MLLRFPQVYQGFVCQSALGTSGAFSPELGGSRSLPSGDVGTSAV PSCEAGARLSVIEEPPDFCAASTVSVIDVAMKAIARSHVTLLSAVAAARPVMAPPPPP PPMPRPPPSERCRRTTAMRPSARRRWMMRTTFSIGPCGCWLSIGRFIGKIAGRGKGGV FLSCPEERKTSRQQDLIVCITICNWTGARPCGQHLRMPHDHHDHPHSLLPSEPALRVK ALETILTRKGLIDPAALDAIIDTYENKVGPQNGARVVARAWSDPAFRAALLEDADKIL DEMALNGRQGEHVVVVENTPERHNMVVCTLCSCYPWPLLGIPPGWYKSDAYRARAVRE PRKVLAEFGVTLPADTSVRVWDSTAEVRYLVLPMRPEGTDGWSEEALMTLVNRDSMIG TALATPASEAPA" /product="nitrile hydratase subunit alpha" /transl_table=11 /EC_number="4.2.1.84" /note="identified by match to putative ortholog SPO1314 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 428166..429809 /locus_tag="Silicibacter_440" /function="COG: CTP synthase (UTP-ammonia lyase)" /gene="pyrG" /transl_table=11 /note="identified by match to putative ortholog SPO1312 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="CTP synthase" /translation="MARFIFITGGVVSSLGKGLASAALGALLQARGYSVRLRKLDPYL NVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFTGVPARKTDSISSGRIYTNVLEKE RRGDYLGKTIQVIPHVTNEIKDFISIGEDEVDFMLCEIGGTVGDIEGLPFFEAIRQFS QDKPRGQCIFMHLTLLPYIKASGELKTKPTQHSVKELRSIGLAPDILVCRSEGPIPVK EREKLALFCNVRADSVIAAQDLKSIYEAPLAYHREGLDQAVLDAFGIAPAPRPTLDTW EDVADRIYNPEGEVKVAIVGKYTQLEDAYKSIAEALTHGGMANRVKVRIEWVDAELFD KEDATPYLQGFHAILVPGGFGERGTEGKIKAAQYAREHKVPYLGICLGMQMAVIEAAR NVAGIEEAGSEEFDHEAGKKRFEPVVYHLKEWVQGNHKVSRSADDDKGGTMRLGAYDA ALTEGSKVAEVYGSNAIEERHRHRYEVDIKYREQLEACGLKFTGMSPDGRLPEIVEWT DHPWFIGVQFHPELKSKPFDPHPLFKDFVRAAKDTSRLV" /EC_number="6.3.4.2" CDS 429951..430382 /locus_tag="Silicibacter_441" /translation="MPEPGTITSKEPREEFPVIGTEEVPAVFFDGDKLLLCYEVAAIE GGGLAILEFDEVLDFRVDPMNVDELSDSPYPVSAWNMTEICGSEKAARWAAMDARYWS ISFTDMTLTILFDTVRLAGRSREKRLPHEALKHFIGSSLAA" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 430456..430788 /locus_tag="Silicibacter_442" /translation="MIRAFRSLIERQMAKAAQSGQLSGLEGEGKPLPDRSGEALVDPG LAAGVRIMAEAGAVPEEFPLKKQLDAARAAYPKITDPDARKAAMAELADLEMRYNMAR DARKAFFR" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3023 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 430901..431803 /locus_tag="Silicibacter_443" /function="COG: Fructose-1,6-bisphosphate aldolase" /gene="fda" /transl_table=11 /note="identified by match to putative ortholog SPO1899 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="fructose-bisphosphate aldolase, class I" /translation="MATDPAIQQQQFDRIATGKGFIAALDQSGGSTPKALALYGVMED AYSNDDEMFAEIQKMRARIITAPDFNSDKILGAILFEKTMDNAIDGTAVPVYLWEKCG VVPFLKVDKGLADEANGVQLMKPMPELDALLSRAVAAGIFGTKMRSVIKEANADGIKA VVAQQFEVGLQIARAGLVPIIEPEVDINSATKDEAEALLKGEIAAQLDALPEGTQVAL KLTIPSEAGLYDSLADHPAVVRVVALSGGYSTDDACARLSQNSKMIASFSRALTEGLN VAMSDDEYNAALGSNIDKIYNASL" /EC_number="4.1.2.13" CDS complement(431876..433333) /locus_tag="Silicibacter_444" /function="COG: Methyl-accepting chemotaxis protein" /gene="mcp" /translation="MTFDMNALLATYDLDGANQALLQKRAKMILGLLPEVLDHFYDRV GREPEMAAFFKTEAMMERAKGEQLQHWSRLFSGDFGEDYIQSARNIGRVHTRIGLPFS FFNAGYAHANAHIQALILKRHSGGLMRRATETHALLGVLSRAMALDIQLIFDAHAEAM QEEHTRGVRYITEAIEALAAQDLSHEMPSAQTGDFPSEFNGVRESLNAAFGALRQVIQ GIRSTAQQLDTGAAEVSHASQDLSQRTESQAATLEETTAAVEEITVSMRASAEATQQT RNAVDTTRRRAEEGSAVVRNAVEKMNEIADSSVQISKIISIIDDISFQTNLLALNAGV EAARAGESGRGFAVVASEVRNLAQRTADSAAEIKGLIDISNDHVESGVELVGNAGRML ESIVRHIKEASELTEQVASAAEQQSTAFGEINIGMSQLDTVTQQNAAMVEQSTAALVE MRNDASALNALVEVFRLRAGEQGGGGQEIALRAAS" /product="Probable chemoreceptor" /transl_table=11 /note="Bacterial chemotaxis sensory transducer, Methyl-accepting chemotaxis protein (MCP) signaling domain, , belas" /note="Conserved hypothetical protein" CDS complement(433752..434474) /locus_tag="Silicibacter_445" /translation="MRLKLLLSHPSVPVMLAAVALGIAILWAEGATWQWGFVVLGVGL QMLNEYGLHRYIFHLKPPRQQWAFDLLYQAHYGHHDFPTNHKLFFAPIWVAVPMLVVN FAVIFGLLWLVLPAYALSLAAAIVLVGGVATFLGYEWFHMTAHLTVTKTRVERHVTQL HNQHHFRDFSKWFHVSPGGEVIDRAMGTAIDRETLKSQQRIEFIRTLGMTPDDPRLVA ARDRFAHRYGLSAEERARACRA" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 435073..436608 /locus_tag="Silicibacter_446" /function="COG: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase" /translation="MIQPVSCICPIAAKLITSRPAQKLLPAPESTTARASEAATSLAA AITAASMCLSTAFILSARVRVTWATWSRISTDTRALSSAITAPPSGCRLNVACSLPRF GRAFQPDARARRTGSFPDRDLISPDLPLPACARAARSWAMTDSRQTPLAQSLPASVPF VGPETHERQRGAPFVARLGANENLFGVSPKAIAAMQASAAEIWKYGDAESYELRAALS ALHGIAPEHIMVGEGIDGLLGNLVRLYVGAGDAVVTSLGAYPTFNYHVAGFGGDLHTV PYKDDHEDIKALMAKAHEVGAKLVYLANPDNPMGSWHRGADIVAALDDLPEGSLLVLD EAYVECAPKGTAAPVDVTDPRVIRMRTLSKAYGMAGARVGYAMGAVEVISAFHKVRNH FGMNRCAQIGATEAIKDQAWLAHVQAEIATAREEISRIARENGLTPLPSATNFVAIDC GRDGAFAKAVLEALVARDIFVRMPFAAPQNRCIRVSCGPERERRAFAEALPLALKDAQ NGA" /product="aminotransferase, classes I and II" /transl_table=11 /note="identified by match to putative ortholog SPO3027 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 436714..436950 /locus_tag="Silicibacter_447" /translation="MKRHNLHHDNTEFLSATLSFLAVNLLWIFFALWLLFGMVPVLLL AVTMNHMINRLEVRMIRAEQRAGKGQGRTLDRRV" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(437184..438398) /locus_tag="Silicibacter_448" /function="COG: Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase" /translation="MRDSVKLSSGRSYLAIPGPSVMPDQVLQAMHRASPNIYAGELVE MTGTLPADLRRVARTQHHVAIYIANGHGAWEAALSNTLQEGDKVLVPASGRFAYGWSE MAEALGINVEVMDFGLQAPFDLARVAERLAADKAYEIKAVLGVHTDTSTSIRNDINGL RAAMDEVGHPALLMADCIASLGCDRFEMDAWGVDVMVTGCQKGLMVPAGMSFVFFNDK AAEARARLPRISRYWDWVPRANPEYFYQFFGGTAPTHHLYGLRAALDLIHAEGIEQIW TRHETLARAIWAACDRWSEGGALAMNVADPALRSHAVTALRLPSPRATDLRVWLEENL GLTLGIGLGMAPPDSAEWHGFFRLGHMGHVNGHMIMGLLGGIETGLRALDIPHGAGAL ESAAKVLAGAPS" /product="serine--glyoxylate transaminase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3029 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 438631..440490 /locus_tag="Silicibacter_449" /function="COG: ABC-type multidrug transport system, ATPase and permease components" /translation="MSTQYMSSRKLLRWLWRGYLRHHVGLLAIAVFFMLLEGASVGGL SYMMQPMFDLVFVDGSENALIWVSVAFFAIFVLRGFSSVTQRVILATINQRSEAHMRT DMLERLIHQDASFHQHHPPGFLIQRVQTDVAAINQVWQAIITGSGRDVAQLVAVLTVA ISVDWRWTLIMLIGVPLLVLPLSIVQRYVRKKASLARDLGAVQATRLDEVFHGIVPIK LNRLEDYQSGRYRSATAAFVRAQIKAALGASSTTGMVDLMAGFGVMCVILFGGREIID GDKTVGEFMSFFTAIGLAFDPMRRLAAIMGIWQGAAAAMERIKELMDEPITLVSPEHP KPAPKGLPEIRLDNVNLYYGEAHILRDLSLVAEAGKTTALVGASGAGKSTIFNILTRL VDPQTGSVTLDGTEVRDLDLGDLRDLFSVVTQDALLFDETLRENILLGRTDVSEERLA EVLDAAHVSDFLHKLPEGLETRVGPRGSALSGGQRQRVVIARALLRDTPLLLLDEATS ALDAQSEKVVQKALEKLSGGRTTIVIAHRLSTIRSADKIVVMERGRVMDQGRHEELLE RGGIYADLYRLQFQDGKTVIDTDGMNAQIAQNDNRNAREETGLLRRFARRLFG" /product="efflux ABC transporter, transmembrane ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3030 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 440598..441344 /locus_tag="Silicibacter_450" /function="COG: Predicted aminomethyltransferase related to GcvT" /translation="MADRRILRLEGPDTRSFLQGLVSNDVNKVQDGLVYAAILTPQGK YLADFFLAADGDAVLLDVAEALADDLVKRLKMYKLRANVTLEETDLKLRRGTGDAPEG ALPDPRHPALGWRQYGKETFDDGSDWDVIRVTHVIPETGIELTPDSYLLEVGFERLNG VDFRKGCYVGQEVTARMKHKTELRKGLTQVEIDGTVPVGAQITAGGKAVGQVFTQSGG KAIAYLRFDRAKGALEAEGTALRWPEAPAE" /product="aminomethyl transferase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1246 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 441457..442038 /locus_tag="Silicibacter_451" /translation="MRRLFSKAILTTLLVGAGLVGATSVASAQEYWEYGDWRVFITDV DTGEDLRRTCLAMTGGDGMPSIRLEITDGDAGPPHHFPTPTYFSSVPRGHRPLIGNAQ GVAFVFDRQGVFFGVAEGGYDDDGIAWSAASPRWQDAKNMLLWMKAGSLMEVRALDAY RASTEAYVASMRGFTAAYGKMMDSCGHSLEIPQ" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 442075..442200 /locus_tag="Silicibacter_452" /translation="MNMPSLPLGRAPLRGAIPRSLRTKKPRAIYGAGLCQVWYQV" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(442212..442775) /locus_tag="Silicibacter_453" /function="COG: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)" /gene="efp" /translation="MPKINGNEIRPGNVLEHNGGLWAAVKVDHVKPGKGGAFAQVEMK NLRNGSKLNERFRSADKVERVRLEQKDQQFLYETDGMLVFMDTETYEQIELPADLLGD RRPFLQDGMTIVVEFYESEALNATVPQKVTCKIVETEPVVKGQTAANSFKPAILDNGV KVMVPPFVGQDEMIIVNTETMEYSERA" /product="translation elongation factor P" /transl_table=11 /note="identified by match to putative ortholog SPO1244 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 443002..443319 /locus_tag="Silicibacter_454" /translation="MRDFVDGTAYNNEQGNRARKLFAAVVLAALDDAIADDKKYGNGP EQIARWARSRDGREVLTCAGIDPNERVVEGLMEFVGRGVRTSVALSREESERRNAAQA EAA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1243 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 443521..444987 /locus_tag="Silicibacter_455" /function="COG: Cobyric acid synthase" /gene="cobQ" /translation="MTPKALMIQGTGSNVGKSMLVAGLARALRKRGLSVAPFKPQNMS NNAAVTSDGGEIGRAQALQARAAGLAPHTDMNPVLLKPETDTGAQVIVQGKRRGTRAA GSFMRDKAGLLEATLESFHRLAAQHDIVLIEGAGSPAETNLRKGDIANMGFAEAAGVP VLLVGDIHRGGVIAQIVGTHTVLEPSDRARIKAFAVNRFRGDLSLFDGGRDDIARWTG WPSLGVVPWFWDAWKLPAEDMMDIASHKGGACKVVVPQLERMANFDDLDPLAAEPAVT VEIVPPGRALPGDADLVLIPGSKSTIGDLAYLRTQGWDIDILAHHRRGGHVLGLCGGY QMLGQSIDDPEGVDGHPGKVAGLGLLDVHTVMAGDKRVTLSAARTLEGDLPVSGYEIH MGRTTGPDCARAWLALEGRAEGATSADGRVRGSYLHGLFTSDAFRAQFLSDLGHQSDL DYDAGVEATLDELAAHLEQYMDVEGLLELAEPIPVPES" /product="cobyric acid synthase CobQ" /transl_table=11 /note="identified by match to putative ortholog SPO1242 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(445325..446632) /locus_tag="Silicibacter_456" /function="COG: AAA ATPase containing von Willebrand factor type A (vWA) domain" /translation="MSDPVTHSEIEDVLSSIRRLVRETGREETPSAQPKPASRLVLTP ALRVHEPEATRAPQASQEGRSDTGSNGAQDNAATRAAASDAVSVLREKSASAEKSRVL HRAPAYDTAPAQDTASEGSPHDRAAAPNEARQSHVATPEPTPVAAPEEPIAEAPFVEV DEAGLKDVLDEAPNAPIPLDAVRRAEPQYAAPQETLDEAQPEHMGEVAPQVSPASPAD TAADAPIETPVEAPADAPWRDPGARLFDSLETGTPSKPTVAENADAAPAPAQQDAAET TATPTVAGDEAVTSPGQSSRVAAVVRRIAELETAGRVEAAGTDEGRNRAPEINEDDIE AVPHSGPTVETIQWEDHQDTAPEPASFAESAQDMTQDSLTEATMNRLAASEEFMDEEG LRELVTSIVREELQGALGERITRNVRKLVRREIQRALSTQELL" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1241 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(446709..448130) /locus_tag="Silicibacter_457" /function="COG: Outer membrane protein" /translation="MQKLLKSKRIKAFATIGVLATAVLSAPQARADNVTDAMIGAYTS SGLLEQNRALLRAADEGVAATVARLRPVITATLAIARDYNRTGFGTGGARSSHSTGAS LRLGMEWLLFDNGATQLDQAAAQETVLATRQTLLDVEQQVLFAAVQAYVNVLTQQDIV ALRQNNLRLLQEELRAANDRFEVGEVTRTDVALAESRVAEARANLTDARGALLTARAT YEEVVGRAPGAVASYPPLPRRAASLSDAQALALRSHPSLRAQQHSVRAAQLTADSSLR DMGPNVKFTASATHSEVHSSDSNADNFDLGLSLNQTLYAGGALAAARRADLARLDAER GALISIQRSISSSAASAYTAFETAAASLVSSNQRVRAAQVAFDGIREEATLGSRTTLD VLQAEQELLDAQTARLSARANQALAAYQLLQAQGLLTAENLNLAVERYDPELYHNQVR SAPAFVTKRGQDLDRVLKALRKN" /product="type I secretion outer membrane protein, TolC family" /transl_table=11 /note="identified by match to putative ortholog SPO1240 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(448275..448928) /locus_tag="Silicibacter_458" /function="COG: Protein-L-isoaspartate carboxylmethyltransferase" /gene="pcm-1" /transl_table=11 /note="identified by match to putative ortholog SPO1239 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="protein-L-isoaspartate O-methyltransferase" /translation="MTDFSDRRRMMVDTQIRPADVTKYPIIEALLAISREKFVPDSQA EVAYADQSVPLSTGRVVPEPRTLAKMLDALDVRQDELVLDVACGFGYSTAVVARLAQM VIGVEEDESLASEAQEILSASNADNAIVHQGDLAEGAAEHGPYDVIMIEGGVEEVPEA LLAQLKDGGRIAALFMDGALGEVKIGYKSNGRVSWRFEFNAGAPVLPGFAKPRVFSL" /EC_number="2.1.1.77" CDS 448942..449160 /locus_tag="Silicibacter_459" /translation="MFRHSSGFCHIATRAATAPFDNSKGLANLLPALFCLHGLIAREV PCATAGAFHSGGKLAAHITTALHGRPSS" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 449166..449288 /locus_tag="Silicibacter_460" /translation="MLRRPRLALNWAAPRKRTLAPDLPPTANSRIWIAKRDHSA" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 449745..450251 /locus_tag="Silicibacter_462" /translation="MNVEIHGLSSQNKKTDTTQSAQTQGSPAKSGTRSKRAAPSRTRG ETRGLVGLRIPKLTQATLQKTRNRRAIKKRQFYAACAPWSREVAPLWALRFLPTSETV MLSTRSLLGPSEILPRDGEPSMIRPLMMALMIFGLAACETTKGAGRDLQKAGQAISNT AQNVQNAI" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(449454..449762) /locus_tag="Silicibacter_461" /function="COG: DnaK suppressor protein" /translation="MDFNVQRKCLETRLNALSSGMLAGQGLSALARDGVTIDDEVNLL TRQSKMTSLMGREVKAILTALDRMEAGEYGYCRICGADISSEHLSAHPESPFCEFCSA " /product="dnaK suppressor protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2248 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(450319..451236) /locus_tag="Silicibacter_463" /function="COG: FOG: GAF domain" /gene="htlD" /transl_table=11 /note=", GAF, GAF domain, sensory_box: PAS domain S-box" /note="Conserved hypothetical protein" /product="Sensor protein fixL (EC 2.7.3.-)." /translation="MNAGDIASTEQSRAAELEAAGGLRVPQLFSDLPEAVIVADHARR ISWVNPAFERLFGYALSDVRGRTTEFLYASHESYLEKGRAHFSAVPSASDHSYEVTYR RRNTETFLSQTTGGPIRGADGAPVGYLAVIKDISQTRLFETLLRVLFDITTNQALSRD EKVHEILKLGCERFQTMSAIISCVQGQTYTVSYCYSHEAPVEPGTRFELGETYCAQTL TGEGPVAYHRASQSGIASHPCYDMFLLETYIGVPLIVDGHVFGTLNFTSPEARAPFEP MDLELIKLFAAWVSQQLSIDAALSAAKLR" /EC_number="2.7.3.-" CDS 451743..453521 /locus_tag="Silicibacter_464" /function="COG: Predicted periplasmic ligand-binding sensor domain" /gene="shkA" /transl_table=11 /note=", [EC:2.7.3.-], Histidine kinase, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase" /note="High confidence in function and specificity" /product="hypothetical protein" /translation="MAHTAPHHKKISTLHMLVIGLSLAMTIGAWLYSKHQVDKQIEAR FIASRDRTVDLIVDRMSRYEDALWSGVAHARSLSGELNARDWHTFSETLHIEEKYPGV NGIGFIHNVERTDLPAYHEARSSEGRPIQIYPEHDLEYLLPITYIEPEAANAAAIGLD VAHETNRRTGLLASRDSGSARITGPIVLVQDSGNTPGFLFYTPLYAGQMPTTVAERRE RFLGVVYAPFVVRKLVEGLLSKDLRDVRFSLSDGEAVIYDEHGPDEPLYDVDPMFTDT VVVDMYGRKWTVNLRTNLAFRAQNSSAQPSLILAGGLVIEILVISLLVMLSRSTKQAH SLARDLTAELRAKTKHLEKANAEIEQFVYVASHDLKTPARGIGFLVDVIEEELEDVLK SAQNRGELQMQLDMIRDRVARMNDLTKGIMEFSRVGHYGSEGEPRLPVSNLIEDCVAD FEVDPKQVHLASDVSEIACDSHNFRRVLENLIGNAFKYHPHPRAAKVEVAIKDRGDRL TVSVKDDGNGIAPEFHDKIFDVFQTLRKGTEPESTGIGLAIVKKAIQRHGFDITVTSS EGHGAEFSFCWPKDRSQSSMDLENVA" /EC_number="2.7.3.-" CDS 453523..453945 /locus_tag="Silicibacter_465" /function="COG: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /translation="MTRQMNILLVEDDDLDAMMIKRAMAQVAPDAHLIRATDGVEALE IVQSNRVEDPYFILLDVNMPRMNGHEFLKELRASSEHSDTMVFMFTTSESARDIARAY QERANGYIVKPHGKAAMNSILDTLQRYWTTCEPPRTLA" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", CheY-like, Response regulator receiver domain" /note="Hypothetical protein" CDS complement(454401..456317) /locus_tag="Silicibacter_466" /function="COG: Predicted metal-dependent hydrolase with the TIM-barrel fold" /translation="MRTLNRRNLLKGSVAAACLTVPAVRAVGQTNSLSEIGKLFAPVP RAKIFTARDIVTLDPSQPSAEAIAVVGTRILAVGALSEVQEMLGDQPFDVDDSFADKV IVPGFISQHDHPVLAALSMSSEILSIEEWALPTGTVPAVKDKADFMKRLTAAVEARTT PGEPVVTWGYHPAFYGPLTRADLDGISTERPILVWGRSCHEMILNSAALTAGGVTQAA VEAFDAASQKQANLAEGHFWEQGLFAVLPHIASLVATPEQLRAGLELSRDFMHSKGIT FGNEPGGILAKPVQDGVNAVFSSPDMPFRWSFMVDAKSMVASYADDGEVIARSEALQS WYYGMTSLAPRQAKLFSDGAIYSQLMQVRAPYLDDHHGEWMMEKELFERAFRVYWDAG YQLHIHVNGDAGLDRVLETLETNMRRNPRFDHRTVIVHFAVSAFDQVERIKALGAIVS GNPYYVTALADQYSEVGLGAERADSMVRLGDLSRAGVRWSLHSDMPMAPADPLFLMWC AVNRVTTSGRVAAPEQAVSAEDALRGVTIEAAYSLQMEEEIGSLVRGKRANMTILAEN PLEVDPMAIREIEVWGTVMEGRVLPVRSSDRAAATQQDASAGPREAVSPNGAPAFDKA ALEHALKVTHAHHL" /product="amidohydrolase domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO0955 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 456564..456995 /locus_tag="Silicibacter_467" /translation="MATAPPRPRAGPREQSATHTDHRGGGWRIISKGIPINVLRKGKF MQNAILILAAATVVICSPVLALVAQGRPTAGDVALVIAPPWGKSAGDIVTGAGLQDVT PERAPIGALVLLETPDSIDRLYREGAWLITDGKKVLELCKS" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 456983..458575 /locus_tag="Silicibacter_468" /function="COG: Methyl-accepting chemotaxis protein" /gene="mcp" /translation="MQKLREPHADTSAIDSPARPIAKAANKRRIQRVTSWLLVPLPAA AAYFVNGLPLWWAFAALSLVLGAMAWVSRKLPESTRDYLLSFCFIAHCILLTASLSGH AWQLDTHMMFFAALAIVSTLSSPRALIFATVLIALHHISFSVLMPSLVYPGGGIAENL QRTVMHAVIVLLEAGVLLLSMLRSLAADTELKTQQSAAEHQAQAAERAEALAMQSHKN AERVVSIVGDHLRELAAGRLDCKIDTSFPQEYAQLQESFNSTVDTLKGTIEQVKDATY RLSKGATDIDQASENLSNRTESQAATLEQSVAALEELTTSVKSSAEGALSVQRTMDDA RSEAVSSGGVVKDAVSAMSAIEDSSSQIARNISVIDDIAFQTNLLALNAGVEAARAGE AGKGFAVVAAEVQALAQRSADAATEIKSLISQSSQHVDHGVDLVGQAGEAIEKIVERV EQISELVSGIATSAAEQSSGLGEINTGMSQLDQVTQQNAAMVEQVSAASHLLHSDSKR LAQLMAHFETGAADQTQSAAAA" /product="Methyl-accepting chemotaxis serine transducer." /transl_table=11 /note="Bacterial chemotaxis sensory transducer, Methyl-accepting chemotaxis protein (MCP) signaling domain, , belas" /note="Conserved hypothetical protein" CDS 458899..459876 /locus_tag="Silicibacter_469" /function="COG: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases" /translation="MKIGFIGLGNVGGKLAGSLLRNGFDLTVYDLNPDLVAEYVEKGA QPGTGPLAIMRACDAVITCLPSPAACATVVEEMLPAVDSSKIWMEMSTTDAAEVKRLA ALVSERGGSAMECPVSGGCHRADTGNISIFAGCDRATFERMLPTLTTLGRRVLHTGDI GSASILKVMTNYLATANLLTCCEALVTMKAAGIDLNTTYEAMKISSGTSFVHETESQV ILNGSRDISFTMDLVKKDISLFQTIADAHGVPLEISPLLVEIFTDGIARFGERELSPN IIRRLEEATGLSITAPGFPAEMVDDEPEEPGYEVVPTGLSAPLAKAPAG" /product="3-hydroxyisobutyrate dehydrogenase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO2859 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 460100..460981 /locus_tag="Silicibacter_470" /function="COG: Transcriptional regulator" /translation="MRRLPHVTWLRSFEAAARHSSFSAAAEELHLTPAAVSQQIRQLE HHLGFQLFKRLPKGVELTDIGQAYAIPVRKSFVQMQEATDGLFRVQSKSVLRVRCSIS FAALILAPLLRDFAEIHPDIDVELSTAVWSDRMEGAGVDLDIRYGAACWPEQNVHPLP VEEATLVCHPDYAAQLGSALDPAWLGAADIVQIVGSETDWDRYLRLCGIDTPRPRHWM KADSSLIALQILSAGRGCALISRSFARQALSEGRLVAPFDLSLPMQESFVLVERDDLR ENPGLRKLVDWLLTQRL" /product="transcriptional regulator, LysR family" /transl_table=11 /note="identified by match to putative ortholog SPOA0284 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(460978..461868) /locus_tag="Silicibacter_471" /function="COG: Transcriptional regulator" /translation="MDHLPPLRLLVTFEAISRHGSMRDAAQRLNVTQPAVSQALKALE DHVGVALFDRSVRPARLTDAGEMLSRAVREGLGRIAATLEDIRALHAIGERQVTVSCT LGMATYWLMPKLPMFYADYPELTVNVQAPATDLPVLSPGIDVALRYGRGGWREGRTEK LFAEVICPVGAPALVERLLAEGATLAEAPLIHVRNPHNDHWAGWEDYLQARGIQRPRG GGQIFNNYVQAAQAIYDGRGLMLGWRSITGQAERDGALRAWPDGALDLGTSYFVTMPT TPSQDTLLFVDWVRKAAATV" /product="HTH-type transcriptional activator ampR." /transl_table=11 /note=", LysR, substrate-binding, LysR substrate binding domain" /note="Conserved hypothetical protein" CDS 461980..463128 /locus_tag="Silicibacter_472" /function="COG: Probable taurine catabolism dioxygenase" /translation="MNDLSSPPTVATIAGLGDKGLDITLADGATHYFNYYWLRDNCPS SFSAMTRERSFDIFHLETAPRARTAEIDGDALVIDWQDEDHITRMPLSWLNAYAGGQR RPDPADLSRVAWFGDHYPSVPRFSQPDLVSDDATRAKWIEAMLVHGFTIVTDMPDSDA ALTQTAELMGFVRPTFFGTYFDVKTHINPTNTAYTAGALELHTDTPAEEFAPGIQFLH CRINTVDGGESLYADGVAVANDFRKRDPEGFRLLSEVPIPFYCEHDTYDARSRQYVIE LDQHGEVEGLTISQHMADIFDLDQKLLDDYYPAFCRFGRMLQEEKYMMRFLMKGGECM VFDNHRIVHGRAAYTASSGDRYLRGCYVDRSEMRSTYRALVSEGRFKA" /product="butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)" /transl_table=11 /EC_number="1.14.11.1" /note=", [EC:1.14.11.1] , Trimethyllysine dioxygenase, mitochondrial precursor (EC 1.14.11.8) (Epsilon-trimethyllysine 2-oxoglutarate dioxygenase) (TML-alpha- ketoglutarate dioxygenase) (TML hydroxylase) (TML dioxygenase) (TMLD)., Gamma-butyrobetaine hydroxylase, Gamma-butyrobetaine hydroxylase, carnitine_bodg: gamma-butyrobetaine hydroxylase" /note="High confidence in function and specificity" CDS 463125..463853 /locus_tag="Silicibacter_473" /function="COG: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases" /translation="MTLTRALPDAEAQLRTDLADAFRICHMLGWSESVGNHFSAAVSA DGQSFLLNAKWQHFDTIAPEDLLLLDSRTAETPPDVDASAWCVHGTLHRRLPDARVVL HAHSPYATALACLEDPTMVPIDNNTARFYGRTAYDMSFGGIADATEEGERLAEALGDK SVLVMGNHGVSIVGDTVAEAFEDLYFFEKAAQTLILARSTGARLAVLTDAVAQNTADG WRAYQGMAAKHFAYLRSRLPPLPG" /product="class II aldolase/adducin N-terminal domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3749 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(464019..464516) /locus_tag="Silicibacter_474" /function="COG: Predicted transcriptional regulators" /translation="MSNSDVPPPASQTPVVDPSVRARAPVRMDRCGLAQAADILGDRW TLLILREAFYGVVRFADMQEDIGVPRSILSNRLAKLVEAGLLCRFEYRENGARARHGY RLTERGRDLALTFLAMKQWWDTEQSTTPSVHFAPKGKTGAVRVALLDEDGQEVDPETL RVVMG" /product="transcriptional regulator, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3645 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 464576..465421 /locus_tag="Silicibacter_475" /function="COG: Dienelactone hydrolase and related enzymes" /translation="MTTRFIPATPAARPIDQDDPLEDFERREVALLGLTKTVYVAGAG PAVIVMHELPGISPQVARFARWVREAGFTVYMPSLFGRDGAVAQADEGAEVFKRVCIS REFRVMAGMGTSPVVAWLRALASEAHEACGGIGVGAVGMCLTGNFALSMMIEPAMQAP VLCQPSLPLDDPGAIAMSDEEAAAVRARMDQDDLTAQLYRFEGDSFCRAERLAAYFDR FGDRLTEKTLPDSAANPSPAPFFNAHVPTPHSVVTQHLIDAAGTETVKAVEEIIAFLR SRLHP" /product="Putative carboxymethylenebutenolidase" /transl_table=11 /EC_number="3.1.1.45" /note=", Putative carboxymethylenebutenolidase (EC 3.1.1.45) (Dienelactone hydrolase) (DLH)." /note="High confidence in function and specificity" CDS complement(465540..466604) /locus_tag="Silicibacter_476" /function="COG: Signal transduction histidine kinase" /gene="ark1" /transl_table=11 /note=", [EC:2.7.3.-], Aerobic respiration control sensor protein arcB (EC 2.7.3.-)., Histidine kinase, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase" /note="High confidence in function and specificity" /product="Aerobic respiration control sensor protein arcB" /translation="MSLEQKRLLDQVEQAVFVLEPDAEGIPRYTAFNRYALGHIQRRE AEVLGLTIRDLFPGRYGETIYGHHLRVLREGRPFTYQAHLPLHGAEHRIEVTLRPCLD DFGRVTHIVGTTKDISGLGHLQNLQLGAEMFHAEIEDFVSLAAHDLRTPMRHVRTIAE MLREDFEDMGDGKLELIDMLEQIGTRATQLISDILAHAQATTTQSDVRAFSFRDLVNE VLALLDPMGRCVCNISGDQVVGDRAATLIVLRNLIDNALKYGRRADGSPLHVDISLSA EPDDFYAVEVKDNGPGLRDPAALLLNTGTLRTDGGFGLLGVHRLVRARGGTIDARNNE DQPGAVIRFTLPGHLPSAAA" /EC_number="2.7.3.-" CDS complement(467512..467709) /locus_tag="Silicibacter_477" /translation="MRGDMLLYLWLLVASENFPYFPAILGVRFVGAVFVFVLFWFGVG FWAVIPKSNPHESDSFSQNPA" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 468026..468619 /locus_tag="Silicibacter_478" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MAADQLAPFGFRPRVQEEPGKTRDARKGGTLGRRFRGESHHKVD SKGRVSIPASFRRVLEASDPNWQPGDAPELVIVYGDHRRQYLECYTMEAIEEVDAKIA ALPRGSKGRKILERIFNGQSLPTTVDETGRLVLPAKLRQKIDLDKEAFFIASGDTFQI WKPETYEEVEMAEAEKLMDELPDDFDPLEFLDGAGGA" /product="Protein mraZ." /transl_table=11 /note=", Protein of unknown function UPF0040, TIGR00242: mraZ protein" /note="Conserved hypothetical protein" CDS 468623..469612 /locus_tag="Silicibacter_479" /function="COG: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis" /gene="mraW" /transl_table=11 /note="identified by match to putative ortholog SPO1179 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="S-adenosyl-methyltransferase MraW" /translation="MTDRTAAPSGPHIPVLLKPLLAAVAPVTGRWLDGTFGAGGYTKG LLAAGADQVIGVDRDPLAFEMAQPWAAEYGDRLVLQQGVFSRMDEYAQELDGVVLDLG VSSMQLDLAERGFSFMKEGPLDMRMSQDGPSAADLVAELSEVQLADVLYSFGEERASR RIAKAIVKERAQEPITTTLRLAEIIEGCLPRPKPGQSHPATRSFQALRIAVNGEYEEL MGGLLAAERALKPGGLLAVVTFHSVEDRMVKRFFQHRANKTGNANRYAPAMEEQPSQF ELVTRKAVGPDKDELAQNPRSRSALLRVGRRTDAAPVEITAKELSMPQLKETR" /EC_number="2.1.1.-" CDS 469612..469959 /locus_tag="Silicibacter_480" /function="COG: Predicted secreted (periplasmic) protein" /translation="MRTLAYMMTILAVFGLAFWAYRENYATQQVLKETRVLRSDIADA QVRLSVLRAEWAYLNRPDRLRDLAELNFERLGLLPLRPEQFGRVDEVSFPPSGLVIEE GVEVSSYGQEADQ" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1180 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 469956..471737 /locus_tag="Silicibacter_481" /function="COG: Cell division protein FtsI/penicillin-binding protein 2" /translation="MIRTPLRPLARILPARARGENPDLIERENLAQRHSEMEARARTR AEGRLLVLAAFFVCAYVAIGGRMAMMATSEPAEPVSVSGSAIANQRADIVDREGRILA TNFETFSLYAQPPQMVEPLVAAEKLVSIFPDLDHERLVKDFTGSRKFLWIKKKISPEQ MQAVHDIGDPGLMFGPREMRLYPNGKLAAHVLGGASFGKEGVNAAEVIGVAGVEKQFD DYLRDPANGGKPLELSLDLSVQHATEEVLYGGMKLMNAKGATSILMDVHTGEVISVAS LPDFDPNERPRPPTSGFDPSESPLFNRAVQGVYELGSTFKIFAAAQAIELGLVNPETV IDTRGPLRWGKFSIRDFRNYGNEMTVSRIIEKSSNIGTARLAQQIGAERQRAFLGELG MLEPTPFEIVEASGGQPLLPRNWSELSTMTISYGHGISTTPMHLAAGYAAIANGGRLV KPTILKQTGPRLGERVLSKEVAEASLEMLRRVVSSGSASMAEVEGYSVGGKTGTADKP KPRGGYYEDKVIATFAAVFPTDAPKYVLIVTLDEPEIIAYGEDRRTAGWTAAPVAAEM IARLAPLLGLRPQIEPARISGVTLTSN" /product="penicillin-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO1181 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 471752..473236 /locus_tag="Silicibacter_482" /function="COG: UDP-N-acetylmuramyl tripeptide synthase" /gene="murE" /transl_table=11 /note="identified by match to putative ortholog SPO1182 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase" /translation="MTQRPALKLSQLGLTARAGLDPQITGLAVDSREVGEGFVFAALP GTRVHGATFVEQVLDQGAVAILTDAKGAEIAGEAIAAAGAALVVAEDPRQALSGAAAL WFGAQPPVMAAVTGTNGKTSVSTFLRMIWTELGHKAVNLGTTGIEGAWSHPLAHTTPE PITLHRALAAAAEAGVTHAAMEASSHGLDQRRLDGVQLSAAGFTNFTQDHLDYHETFE AYFAAKAGLFRRVLSEDGVAVINMTDPKGAEMRAIAAARGQEIITVGRGLGDIALMGM RVDATGQDIRFTWHDRPFAKRLNLIGGFQAENVLVAAGLAIASGEDPEQVFDTLPHLS TVRGRMQLAATRDNGATVFVDYAHTPDAVATAIKALRPHVLGRLVAIVGAGGDRDATK RPLMGAAAQDNADAVIVTDDNPRSEDPAAIRAAVMGGAPDALNVGDRAEAILRGVDML EAGDALLICGKGHESGQTIGTDVLPFDDVEQASMAVAALDGRMV" /EC_number="6.3.2.13" CDS 473233..474624 /locus_tag="Silicibacter_483" /function="COG: UDP-N-acetylmuramyl pentapeptide synthase" /gene="murF" /transl_table=11 /note="identified by match to putative ortholog SPO1183 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase" /translation="MSLWTAQEAAAATGGRATSDWQVNGISIDTRTIEPGDLFVALKA ARDGHDFVAQALEKGAGAALVSHIPEGVAEDAPLLLVEDVQTALEALGRAGRARTKAR VVAVTGSVGKTSTKEMLAAMLTPQGRTHAAVASYNNHWGVPLTLARMPADTEYAVIEI GMNHPGEIAPLSRQARPHVALVTTVAAVHLEAFEDVAGIAREKAAIIEGLEPGGIAVL NADLEETPVLRDVAQDAGVATRWFGQTSDDYCLQEAQLSGDVTRARIVQAEREFSAEI QSLGVHFAMNATGALAAIEALGADLELALAGLQGWSPVKGRGARFTVGLPSGPVTVLD DAYNANPTSIGAALTVLAATPTEGRRIAYLADMKELGPEEARLHAGLADHPALAKIDA VHCIGPLMKHLYAALPENKRGTWVETSAEAASALPAQIQGGDVVLAKGSLSMAVARVV DAIREIGQGNAPS" /EC_number="6.3.2.10" CDS 474666..475748 /locus_tag="Silicibacter_484" /function="COG: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase" /gene="mraY" /transl_table=11 /note="identified by match to putative ortholog SPO1184 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" /product="phospho-N-acetylmuramoyl-pentapeptide-transferas e" /translation="MLYWLTALSDGGDFFNLFRYITFRAGGAFLTALIFGFVFGKPLI NVLRKRQGKGQPIRDDGPEAHLAKVGTPTMGGLLIVGALLFSTLMWARWDNPFVWLVL FVTMSFGLIGFADDYAKVSKQNTSGVSGKVRLLLGFVIAIVAALWASWNHPAELQNQL AMPVFKDVLLNLGYLYVPFCICVIVGAANAVNLTDGLDGLAIMPVMIAAGTLGIIAYA VGRVDFSEYLDVHYVPGTGEILIFTSALFGGGLGFLWYNAPPAAVFMGDTGSLALGGA LGAIAISTKHELVLAIVGGLFVVEALSVIIQVLYFKRTGRRVFLMAPIHHHYEKKGWA EPTIVIRFWIISLILAMIGLATLKVR" /EC_number="2.7.8.13" CDS complement(476061..477134) /locus_tag="Silicibacter_485" /translation="MVFSMVWAWWRQQAKGTPTIGSVNARRYKGIKERGMQALLNWSS YDQISQMESSLTVQLLQMSVFDFHSSIDRGEMNDARVARLRDRDIEALQQIPDLAQVF ILHHDGYVREAALKQLDGSVGAPGCIYALFWRTNDWVHEVREAAHEALARVLPQTSAE VIVPAIRAALPRIASWGRWSQAGPGRITTLAQRDDVASALVDDVIQSEGAALTVVFRE LCKTPKIDPQLERIFRKAHQPHIRGMALQILLSGKARWPLPQRRKVWIDKPSGRSRME LQFQSRDITVDADVLGLLQRAVTDHASIVRKHALDGMIALRHDREMAHTLDTLVAGLE DDPNIGVRSRVAFFQCKRREENP" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(477154..478239) /locus_tag="Silicibacter_486" /function="COG: ATPases involved in chromosome partitioning" /translation="MPVTQEEIRAALDRLELPGGGTLVSRDMLRALSIEGSTVRFVIE AASPEEASKMEMLRRAAEASVKALPGVETVAVVLTAHGPAAPTKSAQKPAPSLKLGGH PKPQAAPMKPSGVKRILAVGSGKGGVGKSTVSANLAVALARQGRKVGLLDADIYGPSQ PRMMGVSGRPASPDGTTIEPLHAHGVTVMSIGLMVEERKAVVWRGPMLMGALQQMLGQ VNWGELDVLIVDLPPGTGDVQLTLCTKAELSGAIVVSTPQDVALLDARKALDMFDTLK TPVLGLIENMSFFTCPDCGGTHHIFGNGGVAAEAKDLGLPLLGALPIDLETRLAGDSG TPIAAGEGVMAEAYARIAKGLVEGGMA" /product="Mrp protein homolog." /transl_table=11 /note=", Protein of unknown function DUF59" /note="Conserved hypothetical protein" CDS 478447..478779 /locus_tag="Silicibacter_487" /translation="MTNPRIVRPQHFIILRINRDRQSFGHTVQTTEKRDETMAILNTI HAPKSLTSGGVAAMIEGLRARFAQYRVYRATLNELRELSNRELADLGLSRSMLKGIAL EAAYGELK" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1177 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 479422..479913 /locus_tag="Silicibacter_488" /translation="MPQSSPQSKVISCPLPKTSTLWQRVQPQDFIDGYAVESALSPRE AMEIGLSMPGWASALLALRNRLVAPLGLKTEASDTGEGAIFPVTHEDESEIILGTDDS HLDFRICIRREAGRIHMATWVHRNNLLGRAYLVAVMPFHILIVRDSMRRIARASAPLA PVS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1157 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 480056..480817 /locus_tag="Silicibacter_489" /function="COG: Imidazoleglycerol-phosphate synthase" /gene="hisF" /translation="MLKTRLIPCLDVADGRVVKGVNFVGLRDAGDPVEAARAYDAAGA DEICFLDIHATHENRGTMFDMVRRTAEQCFVPLTVGGGVRTKDDVRALLLAGADKVSF NSAAVANPDVIAEAADQFGSQCIVCAIDAKSVAPGKWEIFTHGGRRETGIDAVEFARL VTAKGAGEILLTSMDRDGTKSGFNLEMTRAISDAVNVPVIASGGVGTLDHLVDGVTKG GASAVLAASIFHFGEYTVQEAKEHMIANGIPMRLQ" /product="imidazoleglycerol phosphate synthase, cyclase subunit" /transl_table=11 /note="identified by match to putative ortholog SPO1156 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 480814..481131 /locus_tag="Silicibacter_490" /function="COG: Phosphoribosyl-ATP pyrophosphohydrolase" /translation="MTLLHDLEQTILSRKGTDPDTSWTAKLLSKGPEKCAEKFGEEAI EAIIEAVKDDKAKLASEGADVLYHFLVMLAARDVALDDVLTVLAERQGLSGLAEKAAR PKG" /product="phosphoribosyl-ATP pyrophosphohydrolase" /transl_table=11 /EC_number="3.6.1.31" /note="identified by match to putative ortholog SPO1155 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(481188..482351) /locus_tag="Silicibacter_491" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MARLKIDNRTARSLWLQLHGLAQTPTGPLDVLGLIEQLGFVQLD TIQVVSRAHHHILWSRNQNYREPMLDPLLRTHRQVFEHFTHDASVLPMAFLPMWQRQF ARKKHQVSRSNWFGKHLDPELISDVLRRITEDGPLSTKDFETRRADRTAMWTRPPHKM VLDYLWYAGELATSHREGFTKYYDLAERVYPQDVPQLSDQAQVQGLCHAALDRIGFGT LGQIRKFWEACAVEEVARWAEEAAPDLIEAEVEGADGSWSNVLACSDIETRIAALSSP TSRLRILNPFDPAIRDRKRLARLFGFDYTVEMFVPAAKRQWGYYIYPLLEGSRLVGRA EIKGDRSKGTLTLSKLWMEHPHLKTPKRLQKLDAELGRLARLAGLQRVIWAVE" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3685 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(482495..482959) /locus_tag="Silicibacter_492" /function="COG: Enzyme related to GTP cyclohydrolase I" /translation="MSEDIYQNLKQLGGETRIPASPEEAELERVANPQADVAYNVRFT APEFTSLCPMTGQPDFAHLVIDYVPGPWLVESKSLKLFLTSFRNHGAFHEDCTISIAR RLVDFLDPQWLRIGGYWYPRGGIPIDVFWQSGTIPEGVWIPDQGVPPYRGRG" /product="GTP cyclohydrolase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3753 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(482976..483683) /locus_tag="Silicibacter_493" /function="COG: Organic radical activating enzymes" /translation="MTLRIAEIFGPTIQGEGALIGEPTVFVRAGGCDYRCSWCDSLHA VDSAHRHSWAAMETEAVWQEVRRLSGDQPLTVSLSGGNPAIQDFGPLIARGKAAGYRF ACETQGSIPRPWFSDLETLVLSPKPPSSGEDVDWGAFIACRKIGAGARQQVMKIVIFD EADYLWAREVHRRHSDLPLYLQPGNPEVDPETPVDLNAQAERLRWLTERAMGERWFAP RILPQLHVLIWGNKRGV" /product="radical SAM domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3752 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(483680..484033) /locus_tag="Silicibacter_494" /function="COG: 6-pyruvoyl-tetrahydropterin synthase" /translation="MFRIRKEFHFSASHQLSHLPLDHQCARLHGHNYIVVVELAAESL NADGFVRDYHDLKPLKTYIDDHFDHRHLNDVMDSPSTAENMARHFYEWCAARWPETSA VLVSETPKTWAEYRP" /product="6-pyruvoyl tetrahydropterin synthase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3903 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(484033..484734) /locus_tag="Silicibacter_495" /function="COG: Predicted PP-loop superfamily ATPase" /gene="exsB" /translation="MKTLVICSGGLDSVSLAHITSQKYQLTRLVSFDYGQRHRKELDF ARAAATRLGVPFHLIDMRSIGGALSGSALTDDIDVPDGHYAEDTMRITVVPNRNAIML AIGFGVAAAQGDEAVATAVHGGDHFIYPDCRPGFTRAFETMQRAALDGYADVRLHTPF VEQSKADIVRAGAAHNTPFAETWSCYKGGDIHCGRCGTCVERREAFHLAEVADPTVYA DPDYWSAAIAGREAE" /product="ExsB" /transl_table=11 /note="identified by match to putative ortholog SPO3751 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 485245..486033 /locus_tag="Silicibacter_496" /function="COG: rRNA methylases" /translation="MNKKSNKKPAWVVEKEKAKKAAASETVWLFGLHAVRDALLNPKR EKLRLVVTLNAQNKLEDAIATSGITPEVVDPRKFSVPIDPGSVHQGAALEVKPLNWGG LEDNCIGAEVPRVILLDRVTDPHNVGAILRSAEVLGASAVIGTRHHSAPETGALAKTA SGALERQPYLRMRNLSDTIVALQQMGYLVLGLDGEAEETIEEAVAGRTKEPIALVLGA EGPGLRQKTKETVDKLVKIDAARGFGSLNVSNAAALSLYASLKG" /product="RNA methyltransferase, TrmH family, group 3" /transl_table=11 /note="identified by match to putative ortholog SPO1150 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 486106..486447 /locus_tag="Silicibacter_497" /translation="MQSAFVPDATLHALVCGTCGAPLKAQKQRPLSDHKGAKLPNAST LQPHGRDDKAAKVKKPKPVKTGKPGKSGKSGDWSTLAHELASAKLMKKRKKKKKSSWK MVFDVIEDIFD" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 486620..487102 /locus_tag="Silicibacter_498" /translation="MPTHPLTLALRSASLAVGLALMVALVPVSKAAAGPIYIAVQDGY AMGGYDPVSFHEAEAPLRGHQDHALMWKGAVWLFHSAQNRSRFEADPRAFAPRFGGHC AYGLSRGHASVGDPETWEIVDGQLFLFNSARGRSLWQEDRQQMLKAAQASWPEALRAQ " /product="twin-arginine translocation pathway signal sequence domain protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1152 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 487430..487894 /locus_tag="Silicibacter_499" /function="COG: Predicted CoA-binding protein" /translation="MYSDTLLKDVLRRTHSIAVVGVSTNPVRPSYYVARYLSLKGYRV IPVNPGHAGKELFGETIRATLSDIDAPVDMVDIFRRPEAVPEIVDEALAVFPALQTIW MQIGVEHAEAAAKAEARGLTVIQNRCPKIEYQRLFGELRQGGFATGIISSKL" /product="Protein yccU." /transl_table=11 /note=", CoA-binding, CoA binding domain" /note="Conserved hypothetical protein" CDS complement(487875..487985) /locus_tag="Silicibacter_500" /translation="MRILPDPSGPLQLFKNISGSGAAPRRVPPVVTVSMK" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(487969..488532) /locus_tag="Silicibacter_501" /translation="MSATPMSDDPTSLAPMQLTYVMTTERGATDRLLTALAEQLASKG IRTAGIVQTNTECYDNKLCDMDVRVLPEGETIRISQSLGEGARGCRLNPDALERAVGL VTSSLSLSPAPQVLLVNKFGKHEADGRGMRPIIAEALAMGVPVVCGVNRMNVEAFQNF AEGLCEEASPDLDALVAWVERAIAHPA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1135 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 489051..490877 /locus_tag="Silicibacter_502" /function="COG: Thiamine biosynthesis protein ThiC" /translation="MNTPTRHPTPNVTTGALPASRKIYVAGEMHEGIRVPMREIATHP TAGEAPLPVYDSSGPYTDPDVSTDIREGLAPLRAAWIKARCDVEAYSGRDVTAADNGF VEGDRLVPEFPVKPAPLRGRQRAAPTQLAYARAGIITPEMEFVAIRENQLRDLSPCHC ARDGEDFGANIPDYVTPEFVRAEIAAGRAIIPANINHPELEPMIIGRNFKVKINANMG TSSVTSSMEEEVDKLVWAIRWGADTVMDLSTGRNIHNTREWIIRNSPVPIGTVPIYQA LEKVNGIAEDLTWEVFRDTLIEQAEQGVDYFTIHAGVRLHMVPMTVERVTGIVSRGGS IMAKWCLHHHRESFLYEHFEEICDICRQYDVSFSLGDGLRPGSIADANDAAQFAELET LGELTKIAWAKDCQVMIEGPGHVAMHKIKENMDKQLECCHEAPFYTLGPLTTDIAPGY DHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPDRDDVKTGVITYKIAAHAADLAKGLP GAQRRDDALSRARFEFRWEDQFNLSLDPETAQSFHDETLPKEAHKVAHFCSMCGPKFC SMRISHDIRAEAQKEGFEAMAAKFREGGELYVPLKDTAPEEA" /product="Thiamine biosynthesis protein thiC." /transl_table=11 /note=", Thiamine biosynthesis protein ThiC, ThiC family, thiC: thiamine biosynthesis protein ThiC" /note="Conserved hypothetical protein" CDS complement(491044..491817) /locus_tag="Silicibacter_503" /function="COG: Uncharacterized proteins, homologs of lactam utilization protein B" /translation="MTSTVDLNADMGESFGPWVMGRDAEVLDVVTSANVACGVHAGDW DVMAQTMADAVARGVGIGAHPGFPDLQGFGRRKLHLPHESLGNLVQYQVGAAQAMAEA AGGKVRHLKLHGAMANMAAADHDMARACYEAALRVAPEIIIMVMAGTQQQAAAEALGC NVACEIFADRAYNADASLVDRSLPGAVIHDAERAGARVAQMVQDGAILAEDGSRIPAR IDTICLHGDTPEALEIARAVRRQLEDAGVTLQQFDGKPL" /product="LamB/YcsF family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3659 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(491859..492884) /locus_tag="Silicibacter_504" /function="COG: Allophanate hydrolase subunit 2" /translation="MSVRLIVHRAGPGLSIQDLGRSGYLAFGLSRGGAADRLALYEGA ALLGQEPSAAAIEMAGLGGTFEVTTDTRIALTGAPMKATLQDGSELRWNASHLLAAGM QLSIGAVRAGSYGYLHVGGGIANALQLGARSAHLASGLGARLRDGAELPLGDDAGGAV NMTLTPEPRLDGGTLRMVPSLQTSLFGAAEVARFQEVRFHRDSRANRMGVRLLPEGQG FALEGGLSVLSEVIAPGDIQVTGDGTPYVLMSECQTTGGYPRIGSVLPCDMPRVAQAQ AGAAFRFEQVTLEEAVEIERRARAERERLPSRLTPLVRDPARMRDLLSYQLVSGVTAG RDLDEAL" /product="urea amidolyase, homolog" /transl_table=11 /note="identified by match to putative ortholog SPO3660 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(492881..493651) /locus_tag="Silicibacter_505" /function="COG: Allophanate hydrolase subunit 1" /translation="MTKSPIRVEPPVGDTQWPEVATAGFDGVVVRFADRLSEPANRAA LAFRAAVDVAGWAAVEETSTSLVSTYLRFDPLGTSHAEMIAQVAALLETRDWYAAALP QGRKLWRVPTVFGTELAPQLEEAAARAGLSAGEAVTQISQTRLRVQTIGFAPGQPYLG ELPPAFDIPRQTELTPEVPEGAVVVAIRQIVLFSVTTPTGWRHIGQTRFRLFRPDAPE PFVLRPGDEVLFEPISPERYAALERAGVDGGATSEVLT" /product="allophanate hydrolase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3661 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 493788..494702 /locus_tag="Silicibacter_506" /function="COG: Transcriptional regulator" /gene="gcvA" /translation="MSRRHYNLPPLTTLTAFEAAARHLSFKDAAKELSVTPGAVSHQV KALEGELGVALFRRKHRGVDLTVPGQTLYDTLAGSLTRISQSLQSIRDQSSAGVVTVG STTAMAAMWLSPAVIRFWRDHPEININQVVRDRAFTTSAELDLYIWYGREKDQRLDQF PLYRDRLLPVAAPERAAELAGADLDVLASQRLIHLEGDDISWTKWHDWFRQLGYSGPV ASGIRVNNYSIALQAARDGAGLTLGWERLISPLITQGDLAIIGPHVLPAPERFFLVSK PDEELTPSARLLRDWIIEEASQITDEPC" /product="HTH-type transcriptional regulator blaA" /transl_table=11 /note=", HTH-type transcriptional regulator blaA (Beta-lactamase regulatory protein blaA)., LysR, substrate-binding, LysR substrate binding domain, dsdC: D-serine deaminase transcriptional activator" /note="High confidence in function and specificity" CDS 494796..495950 /locus_tag="Silicibacter_507" /function="COG: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit" /translation="MTKPVSLQSVLTSVNRANGLPNAHYIDPVVFAEERAAVLFANWS GVGFGKDIPNPGDAKPVDFLGVPLLLVRDHDGGVHVYQNTCRHRGMILVEEAKNIRGT IRCPYHSWCYSLKGKLRAAPHVGGVGQNTHADVKMDELSLVSFRAHVWQDVIFVNIDG KAAPFEEVHADLLQRWQEFDRPLHHGGPESSLKLEVKTNWKLAVENYCESYHLPWVHP GLNSYSRLEDHYNIEKQGKYSGQGTLVYRQLRGAEDEVFPDFEGLSDKWETGGEYVAL YPNVLLGVQRDHSFAIVLEPKGCEETVEHIELYYAKSSAETPELDPLRHQNAQLWKTV FEEDVFVVEGMQKGRHGPMFDGGRFSPAMDGPTHNFHHWVATQIEAARAS" /product="rieske 2Fe-2S domain protein" /transl_table=11 /EC_number="1.14.15.7" /note=", Choline monooxygenase, chloroplast precursor (EC 1.14.15.7)., Rieske [2Fe-2S] region, Rieske [2Fe-2S] domain" /note="High confidence in function and specificity" CDS 495947..496216 /locus_tag="Silicibacter_508" /translation="MSAVELQISPQEAAALHHAILAAHAKHDLAQLVELYAIAADGKE AEGDTDAACFFLTQAFVFALEAGVARAQELNHRLVAYGRAWPLEQ" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(496268..497287) /locus_tag="Silicibacter_509" /function="COG: Transcriptional regulator" /translation="MVPSIWGRACLDPIQSYCEIVLEKTINGTCGYHMPELSLRHLRY FAVLSRALQFRRAARQLGISQPSLSLQIAALEEIVGAPLLERRRNGLILTAAGRDVAA RAERILADCELLVNASATRRAGLSGTLRLGSSPTIGPYILPQVLKRLHETYPDFRLII RDGPSRDLLEDLVAGKHDLILTQAPIQRDDIRFHPLFREPLYLVVPRGHPLATAGVAR RRDLGQEQFLSLNPAYALRRQVEGLAQTVGARMQDDIDGTSLDAIRQMVALGMGVTLM PQSYTRSEIDNRKDDVCVVTLKPGLERHIGLAWRVSSGNPASFEELAEAIAVMGKTDP KAAIT" /product="transcriptional regulator, LysR family" /transl_table=11 /note="identified by match to putative ortholog SPO2238 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 497306..497587 /locus_tag="Silicibacter_510" /translation="MCPTKWRFPMKDSPKVKAFSLEVRLTKLRLKHQTLKARIAREMK RPSPCSATLQLLKRQRLRLKDEIVSCANRLRALGRRNLASGPMLSRPTS" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Protein of unknown function DUF465" /note="Hypothetical protein" CDS 497629..500139 /locus_tag="Silicibacter_511" /function="COG: Glycine cleavage system T protein (aminomethyltransferase)" /translation="MRIIEVAQGGAAVEHFPNAPSPQQSKGTLIMRTEAKAVVIGGGV IGCSILYHLTKLGWSDVVLLERDELTSGSTWHAAANIHGLHDSTNISRIQHYTMTLYK ELEQETGQGCGVFQPGSLYLAQTEDRAHQLRLQAAKAKLYGMNFYEISIEEAQELNPL VNFDGIRCVMYEPDGGNVDPSGVTQAYATGARQRGAEIHRFTPVTATEAQPDGTWIVK TPKGDIHTDWVVNAAGLWGREVAKLAGLELPLQPTEHQYFVTETIPEIAGMERRLPSV SDRDGEYYLRQEGQGLLVGAYEKGMKFWAEDGTPLDFAHDLFPDDLERIEENMMNAIE RVPVVGDAGIKRVINGPMIWSPDANVLFGPVPELSGYFCCNGIIPGFSQSGGMGLMAA QWMIEGETQFDMFNWDVARFGDWATKEFTKARVEDQYAHRFAIHFPNEERSAGRPART RPIYEMQREMGAVFGLNAGWEHPLWFADQPGAEDTNGFTRQNWWGPVGEECKMLRARA GIIDISNFAKYRCKGPDAEDWLNAVFANRMPKAVGRSCLTPLISKRGGIAGDFTVTRL AEDEFWVIGSGMAERYHKRFFGAVPLPEGTSFESLTQEVCGFNVAGPKSREMLQRMTN EPLDTASFPFMRSKRLMLAGINVVALRVSFTGDLGWELHCATEDQEKLYIALIEAGRE FGAGPVGSRALMSLRVEKGYGSWSREYSPEYFPHEVGFQPLCKMDKDFLNKSAAETAM GTPAREELVLLHLTAEDVEASDADATGGEPIFKDGRGIGRVTSGTYGYTVGMSLALGY VKDAKPGDTVEVMVLGRAHRAVILAEPPFDPKGERLRA" /product="aminomethyl transferase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0207 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(500136..501380) /locus_tag="Silicibacter_512" /function="COG: Glycine/D-amino acid oxidases (deaminating)" /gene="dadA" /transl_table=11 /note=", D-amino acid dehydrogenase small subunit (EC 1.4.99.1)., FAD dependent oxidoreductase, FAD dependent oxidoreductase" /note="High confidence in function and specificity" /product="putative amino acid oxidoreductase" /translation="MSEILVLGGGMVGISTALELQARGHAVTVVDRKAPGQETSYGNA GLIQAEAAEPYAMPRALPEILGILSGRSNDVIWSLRGVLSQLPALWQYYRYSHPHRHL ALSQPNAHLIRTACADHDRWITAAAAQDLIAQDGYLSVFQDAAMFDSLASDLERLRQS YGVEATAMSGPQLCKMEPLYQRPPVGGIHWRDVWSCAAPGELVARYAALFQSRGGEIC TGDASTLRPEGSAWALMSEAGRLHGEHAVIALGPWTPPILAQLGYRVRMIMKHGAHRM YPTGPKLRRPVHDAQHGIVLSSMKGGLRMTCGVALEASGRVPDARQLDRGAKGLAAYM DLGTAEGGPIWHGTRPFLPDMLPMVGAAPRHDRLWFHFGHGHQGFTLGPTTARHLGAL IDGGDSAGIAALLPQNRPAVLS" /EC_number="1.4.99.1" CDS complement(501483..501833) /locus_tag="Silicibacter_513" /function="COG: Putative translation initiation inhibitor, yjgF family" /translation="MSDITYAHTTQRMSQIVTHGDTIYLAGQVGTAGASVTQQTQDCL DKIDALLAEAGSSKERILQATIWLADMSDFAEMNAVWDAWVPEGRAPARACGESKLAT PDFTVEILIIAAKG" /product="endoribonuclease L-PSP family protein" /transl_table=11 /note="identified by match to putative ortholog SPO2000 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(501869..502897) /locus_tag="Silicibacter_514" /function="COG: Deacetylases, including yeast histone deacetylase and acetoin utilization protein" /translation="MKAIYDPRQRAHNPSQFMAFGVMKPNPEQPERTEILRSGAEAAG CTFTAPEDAGLGPIAALHSPEYLTFLQTIHARWSEIEGAGPEVISHIKPGDRRDSYPR SALGQAGYHQADTSCPINADTWGSAYWSAQTAITAADLIAKGERAAYALCRPPGHHAF GDMAGGFCFLNNSGIAAQLLRDRGLRPAILDVDVHHGNGTQGLFYDRDDVLTLSIHAD PADFYPFFWGHSSERGEGRGRGYNLNLPLPRGTEDAPFLDALDTCLDRVRAFGCDVLV IALGLDASVDDPFQGFQVTGDGFSRIGEAIARAGLPTLFVQEGGYISDSLGHNLTRVL GGFTSAAR" /product="acetylpolyamine aminohydrolase" /transl_table=11 /note="identified by match to putative ortholog SPO2002 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(502917..504203) /locus_tag="Silicibacter_515" /function="COG: TRAP-type C4-dicarboxylate transport system, large permease component" /gene="dctM" /translation="MIILGSLFILCVLLLIGVSVPLAFGGVLVFIGVFGGHDVTGFLP TGHWKMNSIVLLAIPLFILAGAIMERGRIAAPLVSVAELLVGRIHGGLSAAAVFASGI FGSISGSAAATLTCIGSIMMPHLKAANYPRGPAAALIVAACPLGLLIPPSSSQILYAW VAQQSVLKCFLSTVVPGLILITLLCMVNYVLMRKADLKLLERPASYPQEFVRRGGRAF PALLMPIIILGGIYGGIMTPTEAAGVAVIYAIPVGLFIYRGLTPQNIWPTLRYAGTTI GVVMLMVFVVVIVSRFLVFEDIPGMAKDLIFSISDNPIVILLMVNLVMILIGMLMDDI SGLLLSAPLLLPIVQSVGMDPVHFAAVLGVNLGMANITPPTAPLLYLGAKVTDTPVSE MLKPTFIMILFAWLPTLLITTFVPEVALWLPNFVFG" /product="Hypothetical protein HI0147." /transl_table=11 /note=", TRAP dicarboxylate transporter, DctM subunit, TRAP C4-dicarboxylate transport (Dct) system permease DctM subunit, dctM: TRAP transporter, DctM subunit" /note="Conserved hypothetical protein" CDS complement(504208..504771) /locus_tag="Silicibacter_516" /function="COG: TRAP-type C4-dicarboxylate transport system, small permease component" /translation="MKDLSQDLPAGLAKLVRILLRLQTIYVCFGCIAMALTFFFVVVF RYGFNADLFAYEEWLLIICFWLYFIAAAIGTWEGAHVNADLLDFVILDPVKRRARAIL ITAIELLVTLVLFYWSTVMMIEEIGDYPRYQTTIALQIPFFVPRAAIFFGFGLMGLYS ALRFFVFLKLPATRFAVSADSDPAQGA" /product="Hypothetical protein yiaM." /transl_table=11 /note="Conserved hypothetical protein" CDS complement(504859..505860) /locus_tag="Silicibacter_517" /function="COG: TRAP-type C4-dicarboxylate transport system, periplasmic component" /translation="MRKSLLTTAATAAAFTLSLGAADAADMRLKLAGVVPVEHFGNDI LKQIEADIEGADVGLSVTLFEAGQLGSGEELFEDAARGNVDLVHSVIYAHRDPVLEIN SLPYLVSSFDEMEDIYLNKDSAFNEIFAERLEGLGLKLLANAPEGFIGVVAENLPENA TSVGDKDVNIRVWSSQVIKNTVEAMGFNATTMNWGEVFPAIQSGVVDGAICCTAQLAY SAFATSDVGKYFIPYGAVVENTTYYASMETWEEMNDEQRAAVQAAFDKAAQTYFAEAK ANEAGYIDKLKETGYEVVEVSDAERSAIAETVRKDVWPGIAEIVGQDVIDRLMTAKN" /product="Putative ABC transporter periplasmic binding protein yiaO precursor." /transl_table=11 /note=", TRAP dicarboxylate transporter- DctP subunit" /note="Conserved hypothetical protein" CDS 506032..507093 /locus_tag="Silicibacter_518" /function="COG: Transcriptional regulator" /translation="MVLNIRHLAAHTQGRQTHSQTLDFKNMTPPDQVHPRPHIDPERL TREMNWNLLRTFVVLAESGSITEAAERLRLKQPSVSVALKKLEDQLGQHLIDRSPGHF TLTKAGQMLYREAVNINGSILRLATLMRTVTPEISGHVRIAVASHVLCPLFDSVIGDF YAAHPKASLAIDVITSGDAITAVAAKRVSFALALVREQDPNLRYLPVYRETFGLFCGP RHPLFGRSDLTLEDLKGHAAVVFDNDRLQDALQDVTLLRARAALAPEITGVSENLEEV RRMIMAGLGIGPLPKHVVARDIEDGLLWQVPPFEDLPEVDVYLIWNPTTVRNRAEETL LTTLIERLETVPFAERSYA" /product="transcriptional regulator, LysR family" /transl_table=11 /note="identified by match to putative ortholog SPO2010 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 507209..508141 /locus_tag="Silicibacter_519" /function="COG: FAD synthase" /gene="ribF" /transl_table=11 /note="identified by match to putative ortholog SPO3154 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="riboflavin biosynthesis protein RibF" /translation="MRIIRDYQFVEEQDRGATVAIGNFDGVHRGHRSVIDLARKAAPD APLGVMTFEPHPREFFAPNAPPFRLMSAEARAHRLEKIGVEKLYQLNFNHALSSLTPE EFARNVIAEGLGLSHVVVGADFCFGKGRAGTVEDLQRFGQDMGFGVTIAPLMGYSEHT VSSTAIRTALSEGRPRDAAAMLGHWHRIEGEVIGGEQRGRTLGFPTANQSIDGLHPPA FGVYAVLVDVLDGPHKGSYHGAASVGVRPMFDGEQPNIETYLFDFKGNLYGAHLSVGL VDYLRAELKFDGLEPFIAQMQADCDQARAILTSL" /EC_number="2.7.1.26" CDS 508151..508621 /locus_tag="Silicibacter_520" /translation="MTNQIDRNGLTPKFWEKKPLKTLSQREWEALCDGCGKCCLNKLE DEDSGEVALTRVACRLLDDQSCQCAHYETRHSFIPECIVLKPENLDTHAYWMPQTCAY RRLWEGKSLPDWHPLVTGDPDSVHRAGVSVRGMTVSEFDTPLEEWEDYIIEEPV" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3155 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(508671..509507) /locus_tag="Silicibacter_521" /function="COG: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /translation="MSLDLSALPQEVYHRKFGTGARHLVAVHCSLAHSGAWRGLVGAL GEDRVSCTAFDMLSHGKSPDWDGQGLLQRRNAEAGLCLLEAEVAETGGPVDLIGHSFG ATVALAMAEMRPDLVRSLVMIEPVLFAAAKVQNPDALEQMRSDHMAVRSPYAAGDVEY ATRLFNRAWGTGHPKWPDLPEHARAAMVRSFPAVMDCDSQVYDDAAGLLAPGALEALE MPVLVMQGGATQPIMTAVTDALSARMPEAQISVIKGAGHMVPVTHPEAVAEVLRAFWS QR" /product="hydrolase, alpha/beta fold family" /transl_table=11 /note="identified by match to putative ortholog SPO3157 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(509504..510118) /locus_tag="Silicibacter_522" /function="COG: 2-hydroxychromene-2-carboxylate isomerase" /gene="nahD" /translation="MTASSLSIDYYFSTLSPFSYLAGQRLEEIAARHGAAVTYKPFDI MALFARTGGTPPKDRHPARQAYRLIEMERQSKRTGLPLNLKPAHWPTNAAPSSYAIIA AQKAGGGDLGALVHGTLRAVWAEERDIAQDDVVKSLLESAGFDPALADSGLLTGAEIY AQNLEDAVNADVFGAPFYVTSDGAKFWGQDRLVDLDEHLAGQGA" /product="2-hydroxychromene-2-carboxylate isomerase" /transl_table=11 /note="identified by match to putative ortholog SPO3158 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 510223..511245 /locus_tag="Silicibacter_523" /function="COG: Phosphoribosylpyrophosphate synthetase" /gene="prs" /transl_table=11 /note="identified by match to putative ortholog SPO3159 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ribose-phosphate pyrophosphokinase" /translation="MPTLNEPKLISGNANLPLAKSISRRMSMHRGVDQDLVNARVERF NDGEIFVEVYENVRGEDMFIIQPTSNPANDNLMELLIIADALRRSSAQRITAVIPYFG YARQDRRTKARTPISAKMVANMLTGAGIERVLTMDLHAAQIQGFFDIPVDNLYASPIF ALDVKAQFKDQMDDLMVVSPDVGGVARARELAKRINAPLSIVDKRREKAGEIAEMTVI GDVKDKICLIVDDICDTAGTLCKAAQILLDNGAKEVHAYISHGVMSGPAVERVTNSVM KSLVLTDSIQPTQPILDAPNIRIVPTAPLFTQAILNIWHGTSVSSLFEDKTLIPIYES LYNSQS" /EC_number="2.7.6.1" CDS 511602..512963 /locus_tag="Silicibacter_524" /function="COG: Predicted nucleoside-diphosphate-sugar epimerases" /translation="MLKSFFQQRICMNASKPNTPLELTVLIIGAYGLIGCGVAQRLER DGHRIIGLGRDTDTGKRVIPTIDWLPADLRSLTKASAWQPFLEGINAVVNCSGALQDG PEDDLEVVHHHAVAALAEACATSQVKLVQISAVGASEDAATPFLASKGRGDAAVQRAG KDHHIFRPGLVLARHSYGGTTMLRMLAAFPLVQPLAVPDAKIQTVALDDVAKAVSAAL AGDIPNGFVGDLVETETHSLRNVVASIRAWLGFAPTKHEFLIPSLFTISMSKIADGLG RLGWRSPLRSTAIKVLDDGVTGVPTDLSRFGLSPVRSLSQTLASMPARAEDRLFARMA LLTPIIIATLISFWFLSGVIGLLQIGEAALVLENVGWTHALAATSVLFWSIVDLAIAA AFAYRPYAKKACWCAVGVSLFYLGASTVFVPHLWLDPLGPMIKVLPSIALALVARIAL ETR" /product="hypothetical protein" /transl_table=11 /EC_number="1.6.99.3" /note=", 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase type VI (3Beta-HSD VI) [Includes: 3-beta-hydroxy-delta(5)-steroid dehydrogenase (EC 1.1.1.145) (3-beta-hydroxy-5-ene steroid dehydrogenase) (Progesterone reductase); Steroid delta-isomerase (EC 5.3.3.1) (Delta-5-3-ketosteroid isomerase)]." /note="High confidence in function and specificity" CDS 512960..513433 /locus_tag="Silicibacter_525" /translation="MIVWIDVVRLLHVLGACVLIGTGAGIAFFMVMAHRTRDAASIAH TAHIVVIADMLFTATAAVAQPITGFVLARYYGWPLWEGWIAVSLALYVFIGLFWLPVV SIQIKMRDEARTSAQTATPLSARYMLLYRIWFACGVPAFLAIVALLWLMVVRPAI" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3062 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 513520..514383 /locus_tag="Silicibacter_526" /function="COG: Permeases of the drug/metabolite transporter (DMT) superfamily" /translation="MHTTDLLRLAALVFTAVTCVVLGDTAGKVLTSGGVDPVIVAWAR FGLGALVLLPLSGLRLTELSIARDWRVWLRAGFVTAGISCILTALRTEPIANVFGAFF VGPGVSYVIAVLFLGERPSPLRSLLLGLGFIGVMLVVKPGFGVSFGLFYALAAGCFYG AYLAMTRTVAGSYRPRLLLMSQLLIGTLLLTPMGLSVEMPTLDWTIFTLLSLSALGSA VGNYILVVVNKTAEASLIAPLVYSQLISATVLGVVVFGEWPDVISLCGLGLILLSGFG SLLAHQRATPL" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0450 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(514446..515939) /locus_tag="Silicibacter_527" /translation="MKACFPFATAVIAATSLADVARATDMAVVTSDDCILTIGRSADV SPGFALPVRFIDIERPEPAADGAKSALTPIATALAVKLVETAFESGVSYLNKKANPDP KTAERMIGVDMFRVANEMEVLAPTKDDPEKTKTVRPVFLNPALRCLTVVTASAPIQTE AGAIRTADLLQRIAQDQETVEAWTQETETNGLSDETAGYRLAKAGIAVLEGGSLGTIL ELRLEVTADGSAFRYVPVYFDVMNFATEGKEKRDIGVTIKVSSLGTSSDNTVALASFH ANQLSAVTGSGGNVGVSVQSSKAFGGFGPTTVEAVLGRGAWSKFAMPSAALPQSIQDL LNLGSLDGLQGNAEFTPFVNEVQRLQTAPFTYTPVNISVSFEESTEASRVVTFLDDFV KDNDALKDQLEKSTLKALGLQSDADALAELVALKQKEIDAAEAHLAVFKADPDNLLDA KKEWFDKVVADREQQIAEKKAELAALQFGQDTYVPTSSLDLTEPDVD" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(516078..518522) /locus_tag="Silicibacter_528" /function="COG: Cation transport ATPase" /translation="MTQPITARLSIEGMTCAGCVGRVDRTLAALPGLRDVSVNLANET AQITAESPEALQQADSALRDLGKPARHQSVQLSIEGMTCGGCVGRVERAIKALPGVVS ANVNLAAESAQVEILQGVVTPSEVAAASTQAGYRARPAEATDTEDRAARKDREARDLR RQVMIAAALTLPVFLLEMGGHVVPAVHHWIAQTIGMQTSWVMQALLTTAVLFLPGRAF FTLGLPALRKGAPDMNSLVALGAGAAWIYSLVATFAPALLPADVRAVYFEAAAMIVTL ILIGRWLEARAKGRTGAAIQALVGLQARHARRLTKDGQPEDVEVEDLAPGDRILVRPG ERIPTDGTVLEGTAHVDESMISGEPIPVEKTEGAPVTGGTVNGEGSLTVAVTRTGAET TLAQIIRMVEDAQGAKLPIQSLVDKVTLRFVPVVMVLAVLTVGVWLLVGPEPRLTNAL VAGVSVLIIACPCAMGLATPTSIMVGTGRAAEQGVLFRKGDALQSLHEVDIIAFDKTG TLTEGRPSLVALRPTEGFERAEVLASVATVEARSEHPIARALVTAAQDEGLSLGEVSN FQSLTARGVTAEVAGREIRIGSARLMSEAGISVDALASEALERAGRGESVLYAAIGGQ LAALLAVADPIKPTSAEAIKALRAMGKDVAMISGDAPATAEAIARDLGISHVVAGVAP EGKVSALRDLASRGRKLGFVGDGINDAPALAQADVGIAIGTGTDVAIEAGDVVLMSGD LRGVATAIQISHKTLVNIRQNLGWAFVYNAALIPLAAGALYPAFGILLSPVFAAGAMA LSSVSVLTNALRLRRA" /product="copper-translocating P-type ATPase" /transl_table=11 /EC_number="3.6.3.4" /note="identified by match to putative ortholog SPO0794 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(518687..519040) /locus_tag="Silicibacter_529" /function="COG: Predicted transcriptional regulators" /gene="cueR" /translation="MLKIGDLAQRTGVSADALRLYERRGLIRSERMANGYRVFDPEME RLVKLIRLGQSIGFTLREMEHVIATLSSRDLSAAQTATLIQDRIDAVDVKLAELTELR RLLVDLQDQACPLRG" /product="HTH-type transcriptional regulator cueR" /transl_table=11 /note=", HTH-type transcriptional regulator cueR (Copper efflux regulator) (Copper export regulator)., Putative DNA binding, MerR family regulatory protein" /note="High confidence in function and specificity" CDS 519107..519547 /locus_tag="Silicibacter_530" /translation="MFCDGMNKKVYLASAWYDLAMSVPFALPITLSLTWGYVMIPLNA ALGFGVLEPLETHGAMFANFYGSIVMLWALLRLYLADVRLAVVDGTGRFLYSIAMINA LMHGATPLLWFFLTVEITFCVLQLAGAVARYRRQAPHRGAETPV" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(519903..520427) /locus_tag="Silicibacter_531" /translation="MAKREPLTFWQWHFSKTKRFTILLFGANAAGPFCLWLLLSGAAA TSGDASVARLQMSLVLWVVLLAVLYWLFRKERQITPAKISQGDKIRFRSIPSDLDADH ILHPIEPATNGMPLTQQKIFSYLVTCGDHFTVYDSAAAGGKELHLKLCVEDRMQTYVV PVPVDDSWYVSRYA" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(520437..520835) /locus_tag="Silicibacter_532" /translation="MSNFRCFHTSRGCSVRNTTFRSQRTGVAQGDVEVFSEFDSGGSM WTGSGGRERRLNVRFDHPFRAIPAVQVTASLMDMHQDTAHRSELVAENISETGFDVVF RTWSDSRVARVRAAWMAIGDLPFEDDWDVE" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3160 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(520918..521331) /locus_tag="Silicibacter_533" /function="COG: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)" /gene="atpC" /transl_table=11 /note="identified by match to putative ortholog SPO3161 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ATP synthase F1, epsilon subunit" /translation="MADTMQFDLVSPERSLASLQARAVQIPGAEGDMTAMPLHAPTLT TLRPGILKVDAPEGTTEYLVTGGFAQITAEGLSVLAERAIPMDEMTRAHLDELIEEAR TMYKTAQEDNSEHGLVEDAAKMLADMEALGTHMSL" /EC_number="3.6.3.14" CDS complement(521343..522767) /locus_tag="Silicibacter_534" /function="COG: F0F1-type ATP synthase, beta subunit" /gene="atpD" /transl_table=11 /note="identified by match to putative ortholog SPO3162 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ATP synthase F1, beta subunit" /translation="MANAKGKVTQIIGAVVDVQFDGELPAILNALTTDNNGKKLVLEV AQHLGENSVRTIAMDATEGLVRGQEVTDTGAPISIPVGNATLGRILNVVGEPVDEGEP IVAKETRAIHQPAPEFNDQSTESEVLVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVL IMELINNIAKVHSGYSVFAGVGERTREGNDLYHEMIESNVIKPDNLEESQVALVYGQM NEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVG YQPTLATDMGAMQERITSTKNGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLNRA ISELGIYPAVDPLDSSSRLMDPQIVGEEHYKVASDVQQILQRYKSLQDIIAILGMDEL SEEDKLTVARARKIQRFLSQPFDVAKVFTGSDGVQVSLEDTIASFKAVVAGEYDHLPE GAFYMVGGIDEVIAKAEKMAADAA" /EC_number="3.6.3.14" CDS complement(522788..523663) /locus_tag="Silicibacter_535" /function="COG: F0F1-type ATP synthase, gamma subunit" /gene="atpG" /transl_table=11 /note="identified by match to putative ortholog SPO3163 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ATP synthase F1, gamma subunit" /translation="MPSLKDLKNRISSVKNTRKITKAMQMVAAAKLRRAQEAAEDARP YAERFNAVMAGLAASVGQSDTAPKLLAGTGSDQVQLLVVMTAERGLCGGFNANIAKLA RQKVLDLQAAGKTVKILTVGKKGRDVLKREFGDLFVGHVDLTEVKRVGYVDAQGIAKD ILARFDAGEFDVATIFYSKFQNVVTQIPTAQQIIPAEFDAEGAEATSGVVDYEPSEEA ILADLLPRGVATQIFAGLLENGASEQGARMSAMDNATRNAGEMIDKLTIEYNRSRQAV ITNELIEIISGAEAL" /EC_number="3.6.3.14" CDS complement(523679..525220) /locus_tag="Silicibacter_536" /function="COG: F0F1-type ATP synthase, alpha subunit" /gene="atpA" /transl_table=11 /note="identified by match to putative ortholog SPO3164 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ATP synthase F1, alpha subunit" /translation="MGIQAAEISAILKDQIKNFGQEAEVAEIGRVLSVGDGIARVYGL DNVQAGEMVEFPGGIMGMALNLESDNVGVVIFGSDRDIKEGDTVKRTNSIVDVPAGPE LLGRVVDGLGNPLDGKGPIEAKERKVADVKAPGIIPRKSVHEPMATGLKSVDAMIPVG RGQRELIIGDRQTGKTAIALDTILNQKSYNDAAGDDDSKKLYCVYVAVGQKRSTVAQL VKKLEESGAMEYSIVVAATASDPAPMQFLAPYAATAMAEYFRDSGKHALIIYDDLSKQ AVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERSAKLNEDFGAGSLTALPIIETQGG DVSAFIPTNVISITDGQIFLETELFYQGIRPAVNTGLSVSRVGSSAQTDAMSSVAGPV KLSLAQYREMAAFAQFGSDLDAATQQLLARGARLTELMKQPQYSPLTNSEIVCIIFAG TNGYLDKVDVKEVGRYEAELLTFLRSKKADFLQWITDEDPKFKKGEPVEKMKAVLDEF AADFA" /EC_number="3.6.3.14" CDS complement(525221..525874) /locus_tag="Silicibacter_537" /function="COG: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)" /gene="atpH" /transl_table=11 /note="identified by match to putative ortholog SPO3165 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ATP synthase delta chain" /translation="MPGQNRATSRPRMLPARTHINRGQNNIGRVDVSEPASISAGIAD RYATAIFEIAAESNALDNLETSINDLAASLADSEDLRTLITSPLVSREEQAAAISAVA DKMGLVDVLRNSLALMAAKRRLFVVPALIDALRARIAEARGEVTAEVVSAKALTKTQS EKLAKTLAERVGKKVTINATVDASIIGGLVVKVGSKMIDSSIRSKLNSLQNAMKEVG" /EC_number="3.6.3.14" CDS complement(526197..526943) /locus_tag="Silicibacter_538" /function="COG: SAM-dependent methyltransferases" /translation="MHLDVQDLRNFYYRSTLGRAAQASIRGQLLRMWPDATGETIAGF GFAAPLLRPYLSEARRLMALMPGPQGVMQWPAGMPNVSVLCEETSWPVETGRVDRLVL LHGLETSEQPSALLDECWRVMGPRGRAIFIVPNRAGLWARSDETPFGYGRPYTLTQLE NQLRAHQFTIEQHAAALYRLPSSRRFWLKSGAMIERVGRRLPAMMAAGVFLVEVSKQT HPQKGHMTRARRTNPIRVLEGLSNPIAEPT" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3167 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 526998..527813 /locus_tag="Silicibacter_539" /function="COG: Zn-dependent hydrolases, including glyoxylases" /translation="MTMPDQTSFPSTVANGLEIVTVPCLADNYAYLVKGPDGVALIDA PEAEPILTALEARDWSLGVIMITHHHHDHVGGVAALREKFGCPVMGPKAEADKIAAQG VTLDMELEPGFEGGTGAGRCQVLAVPGHTLGHIAFYYPEAPALFSADSLMVMGCGRLF EGTPAMMWQTMTTLSALPDETLIYSGHEYTESNAGFALSLEPENAALQKRMDEITKTR QNGQPTVPALLSLEKQTNPFLRAGDPNLKKTLGLEGVEDAEVFAHIRVAKDKF" /product="hydroxyacylglutathione hydrolase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3168 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 528015..530351 /locus_tag="Silicibacter_540" /function="COG: ATPases with chaperone activity, ATP-binding subunit" /gene="clpA" /translation="MPSFSSTLEQAIHAALALANERRHEFATLEHLLLALTEEPDAAR VMRACSVNLDELRSTLLEFVDEDLANLVTDIDGSEAVPTAAFQRVIQRAAIHVQSSGR TEVTGANVLVAIFAERESDAAFFLQDQDMTRYDAVNFIAHGVAKDPAYGENRPVTGAS ESEEEIGGGPSMGSPEGEQKESALAKYCVDLNAKSREGDIDPLIGRDSEVERCIQVLC RRRKNNPLLVGDPGVGKTAIAEGLARKVVQGEVPEVLSETTIYSLDMGALLAGTRYRG DFEERLKAVVTELEEHPDAVLFIDEIHTVIGAGATSGGAMDASNLLKPALQGGKLRTM GSTTYKEFRQHFEKDRALSRRFQKIDVNEPSVEDSIAILKGLKPYFEDHHSIKFTSDA IKSAVELSARYINDRKLPDKAIDVIDEAGAAQHLVAESKRRKTIGVKEIEAVVAKIAR IPPKNVSKDDAEVLKDLEASLKRVVFGQDAAIDALSSAIKLARAGLREPEKPIGNYLF AGPTGVGKTEVAKQLADTLGVELLRFDMSEYMEKHAVSRLIGAPPGYVGFDQGGLLTD GVDQHPHCVLLLDEIEKAHPDVFNILLQVMDNGQLTDHNGRTVNFRNVVLIMTSNAGA SELAKSAIGFGRDRREGEDTAAIERTFSPEFRNRLDATISFGPLPKEVILQVVEKFVL QLEAQLMDRNVSIELTRKAAEWLADKGYDDKMGARPLGRVIQEHIKKPLAEELLFGKL SKGGVVQVGIKDGKLDLRIEGPGKPRLSGNKPPLLTAE" /product="ATP-dependent Clp protease, ATP-binding subunit ClpA" /transl_table=11 /note="identified by match to putative ortholog SPO3169 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(530563..531159) /locus_tag="Silicibacter_541" /translation="MRGSDGFAPGLSGFGLIALTYIVCHGVTIWVIAPAQRFFLDDVS VIASLAYLPHGVRVLSIWLVGWRAILPLIAGAVAANMIFTSSHILDLMQGKMSVSILM SVLSAYAAFEVLRLLGVASYAGGGRRVNWRTLLLTGLLASVFNSVCQTLIFSGIIAPD GTLWELASFVVGDMIGQIVLMIALMMIFRALRGPATRA" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(531280..531627) /locus_tag="Silicibacter_542" /translation="MFDRNMSGLVSGETFLDRLRAIFELRDMLRQMERDIGLESLSPA EKDVFQAAHRLTDVPGQLVVSDQIRQHPLTQGIAQATFHRALRSLLELGFLERPEGAR AKHYMVRKDLLHD" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0695 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(531861..534215) /locus_tag="Silicibacter_543" /function="COG: Flagellar motor protein" /gene="motB" /translation="MALKRRTGQRFQGSIWPGFVDAMTGLLLVLMFVLTIFMVVQFVL RETISGQESELDELSTEVRALAEALGVKEREASQLQARLGALGATLSSTRSDLDAARE QISNQTARISALTQERDAARSDLATARTQISDFEAQVAALIAGRESAEAQIADLTAER DALDAARSELLSEQEALNLALAQLREEVDAEAEAARLAAAQTEALQALVEDLRAEGAA QSERVSALEEALSEEEATRLAEAAAAEALRARLENADAELTAMTLALEEERKKAEDTL TLLAAAEAARDQLDTELEEALAAIEQAKAQVNDRDELAERLTRVLAQMEVTESTATAR VSALEAELERVRNENAATRERMTADLETARQEAADTRSRLEAELTRQRAQTVETESQY QAQLRAAQESFDAERRALEDRLATLEAQADTTRRDLEDQLAALRGQAEETRSGLETRL ARAEADLAAARAAASSTAEERASVEQRLLIALEALERAQAAASDQEVLQSRLLAALAQ KDDFAQEISEQRTLAEQRADLLAQARAALAEEKQISEDARRETALLNQQVAALREQLG GLQSLLDDFKERDAAQGIQLQSLGQDLNTALARAAAEERRRRMLEEQERKRLEAERER LANEAKDLEQYRSEFFGQLRSVLGNQEGVRIEGDRFVFASEVLFALGSAELSEAGKAE IAKVARILQNVAAAIPDDINWIIRVDGHTDNQRFVGAGKYADNWELSQGRALSVVRYM IDELGIPPGRLAANGFGEFQPVNPADTPEARAQNRRIELKLTER" /product="homology to flagellar motor protein" /transl_table=11 /note="OmpA/MotB, OmpA family, , belas" /note="Conserved hypothetical protein" CDS complement(534219..535397) /locus_tag="Silicibacter_544" /gene="motA" /translation="MAHHEREGRPQFSQPVRQVVMMLIALGLAGAGAFMALPRVMPVF EANPYLNGFIAFVFIVGVLATFWQVMQLINSVRWIERFAAGVTTDEDRAPSMLAPLAA LLRSRGARMQLGSASTRSILDSVAERIDEEREITRYIVNLLIFLGLLGTFYGLATTVP AVVDTIRSLAPQDGEEGVAIFNRLMTGLESQLGGMGVAFASSLLGLAGSLIVGLLELF AGHGQNRFYRELEEWLSSFTRVSFSSGEEGGTGDSNLVAGVLDTMAEQMDALQAMFVE TAKGRAEVEGKLSRLIDTIEDMNRRQDDVASISGALERVAVGQETLAELMRAHGDVGI DAESRMRLRSIDVQMLRILEEISAGRQESLSELRKDIDLLVKAFAGPRGMDRAARKES " /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="homology to flagellar motor protein motA, , belas" /note="Hypothetical protein" CDS 535889..537085 /locus_tag="Silicibacter_545" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MIAYKRSAHSHAASPPRGAQPGTPGSTEESRIQIPTSSYYWSFA ASAYKQQNVHKQKGFHGMKRGLKILFGLCVVWSLYWAVAAWGLRQSVAAWFEEQAARG WQVEVKEITAGDGLGGYPWRHVTQITQPALADPGTGAAWRADWLELQSPAIWPGHQSL RFADGDQRLSYYDQTAVITTQGLQADLFLAPGLALELEELGLTSGSWRIGDDAEATLS ADDLSLRMVQGSVAESYEISAEARAFRPGKALRRLLRAAPKLPQAFETLSLAMDVTFD KAWDLSVLEHRRPQPRQIDLALLEAHWGEMRLKMSGALEVDEAGIPTGEVALQVEAWA EFLALAEDSGLLSPTLREQASRVVAVMARASGNPEDLDITLGFRNGNITIGPIPLGPA PRLIIR" /product="hypothetical protein" /transl_table=11 /note="Hypothetical protein" CDS complement(537154..538020) /locus_tag="Silicibacter_546" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MIAWARHTLAGLALACVAFTGMPVVAAPETTLRPPAVRGGATPE AARVSAMPTAAILPQSAPALRPQLRPVSAQILAAAARPTEQIPVAPDGTLRPMMRTPE FTQQVLFGRAKRRRGAVCGDIDIQGEEAGNIAGTLQGCGARDAVRVRSVSGVGLSRPA LMTCETAKALNKWVSRDVETAFGRSNRVVELRVAAGYSCRTRNNRPGAKISEHGRGRA IDISGFKLEDGTVVSVLRGWADASTSRALRRIWKAACGPFRTVLGPEADIYHRDHFHL DVARHRSGRYCR" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3175 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(538017..538949) /locus_tag="Silicibacter_547" /function="COG: Prephenate dehydrogenase" /translation="MSEITAKPVYNRVALIGLGLIASSMFWAIKRAGLAGEVTGYARS AETRDTARRIGLCDRVCDTASAAVEGADLVVLCVPVGAMGAVAAEIAPALMPGATVSD VGSVKRHVIEDVAPHIPEGVHFVPSHPLAGTEHSGPESGFAELFDNRWCLLVPVDGSA PEAVARLRALWEGMGAHVDEMDADHHDLVLAVTSHTPHLIAYTMVGVADDLRRVTDSE VIKYSAAGFRDFTRIAASDPTMWRDVFLTNKDATLEILGRFTEELFALQRAIRTGDGQ HLHDYFTRTRSIRRGIIEAGQDTAAPDFGRGAKK" /product="prephenate dehydrogenase" /transl_table=11 /EC_number="1.3.1.12" /note="identified by match to putative ortholog SPO3176 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(538946..540034) /locus_tag="Silicibacter_548" /function="COG: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase" /gene="hisC" /transl_table=11 /note="identified by match to putative ortholog SPO3177 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="histidinol-phosphate aminotransferase" /translation="MTQITPQPGIMDIALYQGGAAHVDGVSNVTKLSSNENPLGPSPA AVEAMAEAAATMHRYPSSDHATLRAAIAETHGLDAERIICGAGSDEIIAFLCQCYAGP GDEVLYTEHGFAMYRISALAAGATPVEVKERERVTDVDALLAGCTAQTKLVFIANPNN PTGTMISEAEVARLADGIPEDAILVLDGAYAEYVEGFDAGAQLIAARHNVVMTRTFSK IYGLGGARVGWAYGPQEIIDVLNRVRGPFNVSTTALAGAEAAVRDTDYVQRCRLENAK WRGWLADQLAELGVPSDTSCTNFILARFASQSEAESCDDFLKQRGLIVRRVAGYNLPT ALRITIGDETACRAVAAAVKDFKAGAAE" /EC_number="2.6.1.9" CDS complement(540447..541871) /locus_tag="Silicibacter_549" /function="COG: Selenocysteine lyase" /translation="MIFDEFKTSIKNTADAGQLAATLIGEGVMIPGLRGDVPLVYADY VASGRAMRPVEDFIAEKLLPFYANSHTEASYCGQYVTRMRREARAEIARLTGAGDDCE VIFAGSGATAGLNRLVKLLGIEEATRPVVFIGPYEHHSNILPWRESRAEVVEIPEGPD GGVDLAALEAALVAHAEADLKIGSFSAASNVTGIITDPDPVTRLLRAHGALAVWDYAG GGPYLPIDMGAHGAEPKDAVVVSPHKFPGGPGASGVLVLRRDAVRAQNPSWPGGGTVS FVSPWSHRYADSLSAREEAGTPNVVGDIRAALAFLVKEAVGQEQIEAREAQYAAKARA AWADVPGLTLLGHAHAHRLPIFSFTVEGASGAPVHQQLFTRMLSDVYGIQARGGCACA GPYAHRLLEIDEPQSEALLRDLLAGRELQKPGWVRLNFSYLMAEETVDYVIESVKALV LEAENVASAYDADPSTARFQPRAA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3178 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 541978..542439 /locus_tag="Silicibacter_550" /function="COG: Transcriptional regulators" /translation="MSKNLDQIDRDLLRALQRDGSLSQRDLAQRVGLSQNACWRRLKA LQDKGILRGTRAELDRSQLDLGLVVFVMLRTRHHSAEWLAQFRRHVLTIPEVVDFHRI GGDYDYQLKVVTRDMATYDKVYQRLIAGVELDSVTSYFAMEAIAEGRPLPV" /product="transcriptional regulator, AsnC family" /transl_table=11 /note="identified by match to putative ortholog SPO3179 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(542485..543054) /locus_tag="Silicibacter_551" /function="COG: Histone acetyltransferase HPA2 and related acetyltransferases" /translation="MDAERGVWALKSKGGRGGAPRSAPLIFHVIHRKKMIAIRPAVSA DAESIAAVLEALRQAGNRKTAGDAAFIRETYIENSHRIACSVAVDAAGRLLGFQSLQI APEGNPYGAPAGWGVIGTHLHPEASGQGIGRALFAVTRAAAEATHLPAIEALISADNA QGLGYYSAMGFVDYRETPTAVGKKLVLTP" /product="acetyltransferase, GNAT family" /transl_table=11 /note=", GCN5-related N-acetyltransferase" /note="Hypothetical protein" CDS complement(543024..543611) /locus_tag="Silicibacter_552" /translation="MSKISTLCRALAGAATLTVALSAVALAAPLKLTPADPQPSNLKP GLSVRYAYPADVKTLSAARNALKYKVEQGAPLAGLDYRDTELGQNVLTAKRAERVVAD IRGYVRFERPGVYTIDFLTNDGLHATVGGQVVGEYDGRQPCEETFAVEVEVPKAGWYP LKALWFQRTNTACLHMRAGPAGKRPKWMPNAAFGH" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3611 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(543807..544427) /locus_tag="Silicibacter_553" /function="COG: Ribosomal protein S4 and related proteins" /gene="rpsD" /translation="MTKRTSAKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGK LSDFGIQLRAKQKLKGYYGDLTEKQFRRIYGEAERVKGDTGENLIGLLERRLDAVVYR AKFVPTVFAARQFVNHGHVLVNGKRVNIPSYRVKEGDVIEVREKSKQNVAVLEAVQLA ERDVPDYIEVDHSKLTATFVRAPGLADVPYPVVMEPNLVVEFYAKN" /product="ribosomal protein S4" /transl_table=11 /note="identified by match to putative ortholog SPO3181 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(544491..544607) /locus_tag="Silicibacter_554" /translation="MPVKVEDHLIQIQEDNALRLLQVFWSRWTLTVQWQTRL" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(544872..545933) /locus_tag="Silicibacter_555" /translation="MKTGFRGTFVISWTQTEIDGLDAAPVAALDVGAAWSWHGDALRV DGPSELLRLDMADGEQDLRRRAARTVRRLVGAAVQNRSDVHAIEIDDPVSDSSFIVTN GVQSYTVTVIEAGRGRPPLLMFVDDIPPRNTDLWVVHHALGYMGADQAPQNPGVICFT PGTRIATPEGPKPVESLREGDRVQTRDNGAQVVQWIGARRMSGARLFVMPALRPVRIR AGALGIDRPERELLVSPEHRMLVRGAAARALFNESEVLVAARDLINGHTIDVDTTVRE VTYVHLLLEQHQVIWANGVETESFHPAHAALSALDDKDRKRLLRRLPAIEHDPASYGA FARRNLSASEAAILRHSAA" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3182 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(546066..547007) /locus_tag="Silicibacter_556" /translation="MIRSLALALCAAIALSATGAAFAADPVRAEPLKRHRIGYGHLID NDLIGDGKDRWRTGSVASSRIYGFGWDGQAPAGFGELLELRFLGQILAPDNLRSPAAG ERPWAGALSLGVHTHMQRGTLELSLGGDLVFIGPQTGLDDFQDALHDLANTTRPSDAV RAAQVSNTIRPTLVAEVGRTISLGPRSHLRPFVEARAGDETLVRIGADWTFGSAGIGE LMVRDPVTGQRYRTMYETRGISFTLGADVAHVAQSVYLPEGRGYDLTGRRDRLRAGLH WQGDGRDFFYGITYLGKEFSSQPEGQLVGSLRLRWTF" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(547182..547583) /locus_tag="Silicibacter_557" /function="COG: Predicted sulfurtransferase" /translation="MAQLKTSSAQMVAAARARIAEIDAAAAIALHDAPDVVFVDLRDV RERQRMGFIPGSFHCPRGMLEFWVDPDSPYFKEIFAEEKRFIFHCASGWRSALSVALL QDMGFEAAHISDGFSGWRSAGGPVVEPVDES" /product="rhodanese domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1432 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 547775..549073 /locus_tag="Silicibacter_558" /function="COG: Glycine/D-amino acid oxidases (deaminating)" /translation="MRADTSLSQSNAEPISLWDHSSEEPAYANPNARESRVDVAIVGG GYTGLSTALHGALKGLSCHVLEAAEIGHGGSGRNVGLVNAGLWLPPQQVEHLLGKTHG GALVRTLGEMPDYVFSLIEHHQIRCEATRAGTIHAAHAASGLRDLEARAAGWQALGAP VRLLSAEETAEKTGTVKFHGGLLDARAGTINPMGYVRGLARAARAAGAEISTQTKVLS LQKDGADWKVETDRGVITAGRVVLATNAYSADLWPKLAQSFTPIHFFQLATAPLGAEA SAILPDGQGLWDTGKIMFSLRRDRAGRLIIGSMGSVVGGTAGLSRRWAERKLRRLFPD LGRLDFEDAWHGQIAFTPDHLFRIHRLDEGLYAPVGYNGRGITTGTLFGRALADLFAG APEESLPLPISDLVPDRGRAVKTQLYRSAFLAKQAAESIL" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0587 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(549126..549932) /locus_tag="Silicibacter_559" /translation="MLKENRSLDRGIEILETLAREGAMSLADLHRATGLPKSTLRRLL QTLIARKIVRRSLADKLYRTLVVFPDISGEVMPKGMLHISEAAIPRALALTKEIGWPS DIHIRETRAMRIIDNTRHASTFHVERGQINQRVSHFGSATGLACLAEMKDAEIATIYE AFKPDLQWGPVRFGLDLAGLMARIEQVRQVGYAERLSAPMSDPDWDTDLRAIAVAIKA RGRVVGGLSVLWLRPYKPVEEFARLHLEALQTAAAEINATLDAVWEDAAT" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 549977..551659 /locus_tag="Silicibacter_560" /function="COG: Arylsulfatase A and related enzymes" /translation="MPPDLTYRRFGTRNKACAMNILFIMFDQLRFDYLSCAGHPHLKT PHIDRLAERGVRFTNAYVQSPICGAARMSCYTGRYVSSHGAQWNNSPLRVGEWTMGDH LRMAGMGCWLIGKTHMNADSEGMARLGLSPDSVIGARQAECGFDVWIRDDGLWAEGPD GFYDQKRSPYNEYLKSKGYAGHNPWHDFANAGLEGEEMASGWFMANAQKAANIAEEDS ETPWLTTKTIEFIEQAEGPWCAHVSYIKPHWPYIVPAPYHDMYGPEHVLPAVKDPAER EDPHPVYGAFMGNAIGQAFSREEVRQAAIPAYMGLIKQCDDQMGRLFEYLEDTGRMDD TMIVITSDHGDYLGDHWLGEKDLFHEPSVKVPMIIYDPRPDADATRGTTCDALVENID LLPTFVEAAGGEVADHILEGRALTPWLHGQTPEVWRDYAISEYDYSGTPMSVKLGSAP RDARLFMVTDTRWKFMHAEGGLPPMLFDLENDPQEFHDLGRSPDHTEVIDMMYARLGQ WGRRMSQRITRSDAQIIAGRGASRGKGILLGVYEPEDVPAELTVKYRGKPPT" /product="Steryl-sulfatase precursor" /transl_table=11 /EC_number="3.1.6.2" /note=", Steryl-sulfatase precursor (EC 3.1.6.2) (Steroid sulfatase) (Steryl- sulfate sulfohydrolase) (Arylsulfatase C) (ASC)., Sulfatase, Sulfatase" /note="High confidence in function and specificity" CDS 551666..551767 /locus_tag="Silicibacter_561" /translation="MRPVLSRALTVSTQLRYVAATMSRASQEDRDVA" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 551988..553448 /locus_tag="Silicibacter_562" /function="COG: Uncharacterized conserved protein" /translation="MLLVENFDLRATMEQPTSFDEMWGTSGSLREPYREFHDWFGSED PARLRKKQRDADKLFRLTGITFNVYGKAEAEERLIPFDIIPRIISGSEWARLSRGIEQ RVRAINAFLYDIYHKQEIVKAGRIPKEMISRNDAFLPHMIGVEPPGGVYTHIVGIDLV RTGPGEFYVLEDNARTPSGVSYMLENRETMLQMFPELFSQNRVQPVSNYPTDLRRSLA ASAPQSCTGKPVVAVLTPGIYNSAYFEHAFLADKMGVELVEGQDLRVIDGRVAMRTTR GYKPIDVLYRRVDDEFLDPLNFNPESALGVPGIMDVYRAGNITIANAPGTGIADDKAI YSYMPEIVEFYTGERPLLQNVQTWRCSEPDALAYVLDNLEDLVVKEVHGSGGYGMLIG PTASKKDLAAFRRKLKARPGNYIAQPTLALSTVPIFSRAGLSPRHVDLRPFVLCSPNK VHITPGGLTRVALKKGSLVVNSSQGGGTKDTWVLED" /product="Hypothetical protein Mb2434c." /transl_table=11 /note=", Protein of unknown function DUF404, Domain of unknown function (DUF404)" /note="Conserved hypothetical protein" CDS 553453..554394 /locus_tag="Silicibacter_563" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MLGKTANGLFWMSRYLERAENTARLIETGQRIALTRLGSAEDEW VSILQSAGSLGGFREAYDTHGQDAAVDWMLRGKDNPSSIMSSIASARQNARLVRAAIT GEVWEAINATYMTASDLLARKVSARDLPDVLASIRQHTALMRGMVHGTMLRNDIYDFL RIGTFLERADNTARILDVKYYVLLPSVSAVGSSIDNVQWESILRSVSARGGFRMEYGA DGGPQEIAHFLIFDKRMPRSLAFCVSKIKDNLRYLNAGQPTPSPSQELVTHLENTYLS HGIEEVFDYGLHEFIEKMLELLLELAHQIQLDYRFYE" /product="Hypothetical protein Mb2597." /transl_table=11 /note=", Bacterial protein of unknown function DUF403, Bacterial domain of unknown function (DUF403)" /note="Conserved hypothetical protein" CDS 554398..555195 /locus_tag="Silicibacter_564" /function="COG: Transglutaminase-like enzymes, putative cysteine proteases" /translation="MRLTIHHTTRYRFDEPVSFGLQQLRKTPKTNTNQQVVEWQTRII GGQKEVSFDDHHHNVTELISFEPGVTELELVSEGVVELTDTHGVVGRHRGPSPLWLYA RPTVLTEARAGVRELIRDLDDSNPVDMLHQLSARIREAITYQIGVSELGWSAEDAIQS AHGVCQDHAHVFIACARKLGLPARYVSGYLMLDDRTTQDAMHAWAEAHVEGLGWVGFD VSNGISPDARYVRVATGLDYSDAAPVSGTRIGGAGEALDVQIEVAQQ" /product="Hypothetical protein ML0607." /transl_table=11 /note=", Transglutaminase-like, Transglutaminase-like superfamily" /note="Conserved hypothetical protein" CDS 555203..555937 /locus_tag="Silicibacter_565" /function="COG: Predicted proteasome-type protease" /translation="MTYCVGMMLDAGLVFMSDTRTNAGLDNISTFKKMTSWEAPGERA ITLLSSGNLATTQAVVSLLEERPHAHGERDPSILGVPSMFQAARLVADTLREVIAQHD AAGQQADSAFGATLILGGQIKGGPPRLFMIYPEGNFIEASADTPFFQIGETKYGRPIL VRAYDPKMSFEAAIKLLLVSFDSTVKANLSVGAPFDFHFYRKDSLQLDTTGRIDADNP YLQLISQGWGDALKNALESLPDFALE" /product="conserved hypothetical protein" /transl_table=11 /note=", 20S proteasome, A and B subunits" /note="Hypothetical protein" CDS 557128..557436 /locus_tag="Silicibacter_567" /translation="MTHPSEPEDITEPTQLRFLRRLVTTLTVIMVGGVLVVIALLVIR LSDDTHAPQVPADISLPEGATARAVTFGSGWLAVVTTEDQILILDSETGALRQQIQID " /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1407 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(556092..557129) /locus_tag="Silicibacter_566" /function="COG: Pseudouridylate synthases, 23S RNA-specific" /gene="rluD" /transl_table=11 /note="identified by match to putative ortholog SPO1408 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ribosomal large subunit pseudouridine synthase D" /translation="MASRRIEFVIADNPPKRLDKAIARDVPEEANLSRTRLARLIESG GVFVDGARANDAKSRVAEGALIVITVEEAEDSHIGPEDIPLDVIHEDADLIVINKPAG MVVHPAPGSPSGTLVNALLHHCGADLSGVGGVKRPGIVHRIDKETSGLLVVAKSDAAH QGLAAQFERHTVERYYQAVCYGVPDGNDPRLRGVRGTSFEPGNILKITTQLARHKTDR QRQAVLFEGGRHAVTRARIIEAFGAPAAASLVECWLETGRTHQIRVHMAHAGHGLLGD PTYGGKRKISPKALSAAGLAAINSFQRQALHAAVLGFEHPVSGEMMRFEAPLPEDMQA LIAALRIPASV" /EC_number="4.2.1.70" tRNA complement(557560..557633) /locus_tag="Silicibacter_13" /gene="Silicibacter_13" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS 557769..558149 /locus_tag="Silicibacter_568" /translation="MEPGGSLFCAAKHLRQRDGDSLVLGRVALWIYAAALKCTDEADI LHFRGLQASTLAHRDPKELDMGINTERDIEANMQIGPTDVGMVRIFIEADGLEIPMDF DPEEAEEIADEIRAAAQAARAVSS" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 558404..559516 /locus_tag="Silicibacter_569" /translation="MYHFTTPPLGPVVILPSAIATANGPQAAAVSISDSESLTTNQLH NQLSEARRARDKMIEQVSRPPEPGWKSAMHQISDTVDHMEKVLDLLRSHVSALPASPA TGSDPLAVYPSGVAMQQSGRTPDSPPSVAEAPAAPTAASDPAAPPAAGPQDPNVSAQA LASSQPRVIYVMNDGVVIIGLPQTEADATTGTAEAASPASRDNSTDAAGRADPLQPPQ SGAPMTANTVISLPLTEDQKRASADLIALAKKAYAYQAQPRDAQAAELISDENVGLTG ALSESPELSAPDRPERAPVPRILTAELAQPDAGSQRPAANDDPLIAAAAPYARDPQRE AAQAQEEQQILALQLDGHHDIIYIVPPAQAAIDLTA" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(559599..560210) /locus_tag="Silicibacter_570" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MTEQHKITEGFDTQAPDRSEAEGRPAEEADQGEVGTGDMDADAA TLALMQPGQRLARGVSRYLRSMGFAALEEFVPQRGLRVDVMALGPKGELWVIECKSSR ADFQSDGKWQGYLEWCDRYFWAVDVEFPTELLPEGTGLILADAYDAEVVRMGPEQKVA PARRKKMTQKFAMDAARRLQRLRDPRPGREAFAFAVSEEDCDS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1766 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(560552..560872) /locus_tag="Silicibacter_571" /translation="MPELIKLYIKSALWGLVLAALFVAILLWFNIANLGALVFGSDSG VIAVLALWISNAVVFGGVQFGFKIMAMAERDDTPRGGTWVGPEMQPVPIPAKASKPQR RTLR" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1765 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 561066..562616 /locus_tag="Silicibacter_572" /function="COG: Adenylate cyclase, family 3 (some proteins contain HAMP domain)" /gene="cyaC" /transl_table=11 /note=", Guanylate cyclase, Adenylate and Guanylate cyclase catalytic domain" /note="High confidence in function and specificity" /product="putative adenylate/guanylate cyclase" /translation="MKITRRIGRFLVNQPHLINWGIGAAIVALPVVVWMDLMAITDQS LRRQGQALDAVLDTVRSYYARNVIGRLNPDGSTFATHDYHDRDGAIPIPATMAIELGD QIGTHGLNVQYRFASDYPFHGRETTELTWAEDHALSRFREGVDDHYLFYRGEESGLLT HAVTMITPVVMEEACVACHNNHSDSPKTDWAVGDIRGVQSYSIVQPVAVSLFSFSHLL AYMVVAGGFGAFFALHQLRLAQRFRKISEELSSNNEFLAGISMKISRYLSPQVYRSIF SGEKDASISTERKKLTVFFSDIKDFTQTAETLQPEELTALLNEYFTEMSAIAAKHGAT IDKFIGDAIVAFFGDPETLGTAEDARACVRMALEMQERLRELEKEWRARGIDRPFRAR IGINTGYCNVGNFGSEERMDYTIIGAEANLAARLEAAAEPGGIVMSHETYAHVRDFVA ATPMPPMQFKGITRDVHPYAIAPGQSGNLPPTETSMDGKSLTVHLERLDDTTRAQLEA ILGKPLKG" /EC_number="4.6.1.1" CDS complement(562731..564380) /locus_tag="Silicibacter_573" /function="COG: Choline-glycine betaine transporter" /gene="betT" /translation="MTDQTTETPDGIPSPDGAAHIIDTDYEIGQDNVEGSVGPFGFDI HNPVFAISGIAVVAFVFYTLALPEQAGNVFSWLFSAVTKGFDWFFLGAANIFVIFCLF LIVTPFGNVRLGGTEAEPDYSYIGWFAMLFAAGMGIGLMFYGVSEPLSHFASSIGGTA SEGGVRTDWAPLGAAGGNEAEAVRLGMAATIFHWGLHPWAIYAVVALALALFSYNKGL PLTIRSAFYPIFGDAVWGWVGHVIDILAVFATLFGLATSLGFGATQANAGLNELFGIS IGSTTEVILISAITAIALVSVLRGLDGGVKILSEINMGLAFVLLVFVLLVGPTVFLLS LFWDSLMAYFQYLPALSNPVGREDVNFMQGWTSFYWAWWISWSPFVGMFIARVSRGRT VREFIICVLLIPSMVCVLWMSVFGGTAIHQVLSDGYTVAQDAALELKLFKMLDVMPLA GITSLVGIVLVIVFFVTSSDSGSLVIDTITAGGKVDAPVPQRAFWCVFEGAVAIVLLL SAGGLQSLQSMVISTGLPFTVVLLVMCYAILRGLMSERKAT" /product="Glycine betaine transporter opuD." /transl_table=11 /note=", BCCT transporter, BCCT family transporter, bcct: choline/carnitine/betaine transport" /note="Conserved hypothetical protein" CDS complement(564422..564838) /locus_tag="Silicibacter_574" /translation="MFQKIVVPVDLAHEAALQRALDVAAAMAKTHSADVCYVGVASAN PGAVARSPEEYASKLEQFAQSQAAQHGITASAHAIMSHDPAVDLNKALERAISDLKAD LVVMATHVPNISDYIWAGHGAHVAAHSAASVLLVRD" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(565092..565574) /locus_tag="Silicibacter_575" /function="COG: Transcription termination factor" /gene="nusB" /translation="MTSKDAPKPGKNKTQARSAARLYAVQALFQMEQSDQSTNKVIVE FEDHRFGATYEGDEYAEGDTKLFRQLVNDAVNHQAKIDQMTDRALVAKWPIARIDPTL RALFRAAGAEFVESDTPVKVVINEYVDIARAFFPEGREASFVNAVLDHMAREAKPEAF " /product="transcription antitermination factor NusB" /transl_table=11 /note="identified by match to putative ortholog SPO1763 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(565598..566122) /locus_tag="Silicibacter_576" /function="COG: Riboflavin synthase beta-chain" /gene="ribH-2" /transl_table=11 /note="identified by match to putative ortholog SPO1762 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="riboflavin synthase, beta subunit" /translation="MAGQESHYILPRPEFDKPVKLLIVVSPYYKDIADNMVAGAVAEI EAVGGTYEVVEVPGALEIPTAIGISDRASNFDGYVALGCVIRGETTHYDTVCNDSSRA IQLLGLQGLCIGNGILTVENRKQAEVRADPEDQNKGGGAAAAALHLIALARKWGAQTK GVGFKPASDSYRLA" /EC_number="2.5.1.9" CDS complement(566137..567402) /locus_tag="Silicibacter_577" /function="COG: 3,4-dihydroxy-2-butanone 4-phosphate synthase" /translation="MRAARERAYAVCGAGICTARGLSRQGRQRRGQGLLDRAAPRAKG LLHMSYETPGPVESELRDAISPIEEIIDAARAGKMYILVDHEDRENEGDLIIPAEFAD ADAINFMATYGRGLICLPMTAERIDRLGLPMMAVNNSSRHETAFTVSIEAREGVDTGI SAADRALTVATAINEQNTMAAIATPGHVFPLRAKRGGVLVRAGHTEASVDISRIAGCH PSAVICEIMKDDGTMARLPDLVEFAKTHDMKIGTISDLIAYRAKNDNLVDETARSTVT SEYGGDWEMRIFTDQTHDVEHVVLIKGDITTPEPVLTRTHALHEASDLLGLGPKPAGE LPRAMELIADEGRGIVCLFRQPRNALYASDEEGVRTIKQTGLGAQILNKLGVEELILL TDSPQTKYVGLDAYGLSIVGTRPILSRDS" /product="3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1761 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(567555..568157) /locus_tag="Silicibacter_578" /translation="MGGRPTLGSVPGLGHNGGPSLEPGALWRTHAWRSAQKKLMPNTL PKLVLQMRLKRAAELGMDYKTYAKVRQTSGQDVLGLLFSSNALRLLKDPRLPEVERAR LAHLKRAERLALTYPPLRPSEVARVNPEIDAADTAPVFTEGWTEMRAKLQGVMRQRGL SGASVLVIGDAPLENEWAAAGRAAAYLSAAEYFGASARRP" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1760 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(568157..568762) /locus_tag="Silicibacter_579" /function="COG: Riboflavin synthase alpha chain" /gene="ribE" /transl_table=11 /note="identified by match to putative ortholog SPO1759 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="riboflavin synthase, alpha subunit" /translation="MFTGIITDVGTITELEQAGDLRARIQTAYDTSSIDMGASIASDG VCLTVVALGPDWYDVQISAETTSKTNIDARGTHKGWFVGKRVNLERALKVGDELGGHI VSGHVDGVAEVVAMRDEGDSTRVTLRAPKELARFIAPKGSVALNGTSLTVNEVEGCDF GINFIPHTKEVTTWGDVAVGDLINLEIDTLARYVARLQESL" /EC_number="2.5.1.9" CDS 569026..570330 /locus_tag="Silicibacter_580" /function="COG: Capsule polysaccharide export protein" /gene="wcbO" /translation="MPMRSKNGSADARSFLFLQGPHGPFFAALGRMLRAAGCSVHRVG FNTGDRVFWPDRQSYIAYRDTPEAWPERFGALLDQRAITDIVLYGDTRPIHADAIAIA KARGITVHTFEEGYLRPYWVTYERDGTNGNSRLMQMPVPEMEQALANSDLEMPMPPAH WGDTRQHVIYGALYHWFVMFLNRGYRNFRPHRALPVTKEFQLYLNRLLMMPLHALHRR LATMRIQRGGFPYHLALLQLEHDSAFQAHSPFSTITEFLEVVVAGFAEGAPRHHHLVF KAHPLEDGRAPIRRALKRLAAEHGVEGRVHYVRGGKLAALLNEARTAVTVNSTAGQQV LWRGLPLKVFGRAVYDKPEFSSTQSLPEFFAAPARPDGRAYKQYRRYLLETSQFPGGF YSRSGRRQLLRQVVDMMLAADDPYDALLRGTAAPRQHLRVVS" /product="Capsule polysaccharide modification protein lipB." /transl_table=11 /note=", Capsule polysaccharide biosynthesis, Capsule polysaccharide biosynthesis protein" /note="Conserved hypothetical protein" CDS 570436..571563 /locus_tag="Silicibacter_581" /function="COG: Periplasmic protein involved in polysaccharide export" /translation="MTLRWARPVALLAAVALAASCGLPKVGPNKREIFAGSVQKQGDA FVVSVNDRVARATAVVPALGFSDAFTKASVLTSDIIRPGDILGLTIWENVDDGLLASA GANATLLEEVQVDGAGFIFVPYAGRVRASGNTPEQLREAITKKLEDQTPDPQVQVRRL AGDGATVSLTGAVGAQGVYPIERPTRTLATMLAQAGGVAIEPEIAQVSVTRQGQTGTI WFEDLYDHPQMDIALRNGDKILVEGDTRSFTALGATAAQARVPFESQNLSALEALAQV GGLIATASDPTGVFVFRNEPEAISNQVLGRDDLIGAQRMIYVLNLTQPNGLFIARDFV IRDGDTIYVTEAPYAQWTKTLSLLTSPLSTAASVETLFGGS" /product="polysaccharide biosynthesis/export protein" /transl_table=11 /note="identified by match to putative ortholog SPO1756 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 571570..573609 /locus_tag="Silicibacter_582" /function="COG: Capsule polysaccharide export protein" /gene="kpsC" /translation="MMQGPLPHLDETRTGSKRSRLFVYNGGFLTQSRVRRILDLAGYD IRLGLPKEGDLVGIWGNSPTAHRGRKIAQEHNAPLVRIEDAFLRSVHPGRDGEPPMGL LIDRAGVHFDPALPSDLITLLKEHPLDDSALMKRARDAMARLQDAHLSKYNAFHPDVP PPEPGYVLVVDQLRDDASVKASIPFPGADRGRFQEMLAFAREENPGARVLIKTHPETT KGHRAGYFDARDTNDQVELFDAPVSPHLLLEGAVGVYTVSSQLGFEAILSGHRPRIFG QPFYAGWGLTQDEFPPAGRHRRLTRAQLFAAAMILFPTWYDPHHDRLCELEDVIDSLE AQVRAWREDRAGWAASEMRLWKRAPLQQFFGRHKRMSFTEKTATAKKSGKNWMVWASK ATKDHAGAHHLEDGFLRSRGLGAELVPPLSLVLDRQGIYYDPTRHSDLDDLIRERVTL SPQQERRIEALVMRLIKHEVTKYNLDGALPDLPKGHRVLVPGQVEDDASLRLGAGKIN TNMKLLQAVRAARPNAVVIYKPHPDVEAGLRKGRISHAEAWADVVAEHANPAALIDSV DEVWTMTSLLGFEALLRRVPVTCVGLPFYAGWGLTRDRLQAPHWRDARPGILGLAHAA LIDYPRYFDPVSKLPCAPEVAVDRLIAGELPARSPLNSSLSKLQGLFASFAPLWR" /product="capsular polysaccharide export protein KpsC" /transl_table=11 /note="identified by match to putative ortholog SPO1755 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(573676..574752) /locus_tag="Silicibacter_583" /function="COG: Pyrimidine reductase, riboflavin biosynthesis" /gene="ribD" /transl_table=11 /note="identified by match to putative ortholog SPO1754 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="riboflavin biosynthesis protein RibD" /translation="MGLALSLGRRGQGRTWPNPAVGCVIVQKGRVVGRGWTQPGGRPH AEPMALAQAGAAARGATAYVSLEPCAHHGKTPPCAQALIEAGVARVVAAIEDSDPRVS GQGFEMLRAAGISVTTGVRAEEAGFDHEGFFLKTEQGRPFVTLKLAASFDGRIATGSG QSQWITGPEARRVVHAMRARHDAVMVGAGTARADDPSLTVRDLGIDQQPARVVVSRHL DLPLISKLARSAAEVPLYLCHGTGADTERLRAWDGLGAHLLPCNALGTQLDPHDVLQQ LGSVGLTRVFCEGGGALAASLLAHDLVDELVGFSAGLTIGAEGLPSIGALGIGHLSEA PRFDLHETRPIGADILHRWRRPQN" /EC_number="3.5.4.26" CDS complement(574828..575295) /locus_tag="Silicibacter_584" /function="COG: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains" /translation="MRCPFCGNVDTQVKDSRPAEDHVSIRRRRFCPACGGRFTTYERV QLRDLVVIKTNGKREDFDRDKLERSIRISMQKRPVDPERIDQMISGIVRRLESMGETD IPSKKIGEIVMEALARIDTVAYVRFASVYKNFQAADDFEDFVHELRPPAPPES" /product="riboflavin biosynthesis protein RibX" /transl_table=11 /note="identified by match to putative ortholog SPO1753 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(575441..575869) /locus_tag="Silicibacter_585" /function="COG: Uncharacterized conserved protein" /translation="MSNIQQRTFTLSTHGQGLYEITDEIRSFVRSSGAVQALLTLYVR HTSCSLLIQENADPEVQGDLKAYFARLVPPTTDPQMSYLRHTYEGPDDMPAHIKAAMM PVSLSIPVSSAEMVLGTWQGIYLFEHRDAPHQRQIVAHLA" /product="conserved hypothetical protein TIGR00149" /transl_table=11 /note="identified by match to putative ortholog SPO1752 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(575874..576332) /locus_tag="Silicibacter_586" /translation="MRQSSHSMTRRLMLPALAATAALAGCADIQSTGPQADYFSSRAL ARIYALEDGRFEVVPEIGAEGAAYWCAASEYARRALGAGWSQDIYVAKGRAPSTVSGR IDAVTFSLSPVPSVTDKSPFIKTFGFKPGDNFSVSTGESLCRDIEPVFFF" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1751 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(576463..576771) /locus_tag="Silicibacter_587" /translation="MSGTNEMKNALSELDEKLNALDTMTEVNSFLVSALREHEQELIR MSPQETRDMLRQKARVRYRADGGETPNPQALDMLEKTLGNGHTAEIIKFPSGGRAGRA " /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(576987..577457) /locus_tag="Silicibacter_588" /translation="MTSIFKIAPIFAVFIAAPALSCPQGATPLVSCSLKSGSAYLETC RLGNFATYAYGKTGQRPDLALARPVQEVEMTPWPGVGRSIWEDFQFRNGDVSYRVFYS IDRFSEGEPALTAGVMVEKGEETLAELDCDPGTIDAGYPLPLWDAQELAAQARN" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(577742..579736) /locus_tag="Silicibacter_589" /function="COG: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)" /gene="rpoD" /translation="MAAKDTDDRKPDDQDAEISLDMSQAQVKKMIAEAREKGYITYDQ LNQVLPPDQVSSEQIEDVMSMLSEMGINIIEDEEAEEEENKGTTELVTTESNREVAVA GAATEKLDRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRNTMILGLCESPLTFQ AITIWHDELLSEDILLRDVIDLEATFGNQMDEDGDVAEPVVDPSAVSGAAKPEKDSGP ELDADGNPILNNDDDDDDDDDQANMSLAAMEAALKDRVLETLERISSDFAMLSEMQDL RISATLNEDGSFSADDEAKYQQLRSEIVELVNGLHLHNNRIEALIDQLYGINRRVMQI DSAMVKLADQARINRKEFVEAYRGRELDPNWLSEMSEKPGRGWQMFIERSTEKVEELR ADMAQVGQYVGLDISEFRRIVQQVQKGEKEARQAKKEMVEANLRLVISIAKKYTNRGL QFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMI ETINKLVRTGRQMLHEIGREPTPEELAEKLQMPLEKVRKVMKIAKEPISLETPIGDEE DSQLGDFIEDKNAVLPLDSAIQENLKETTTRVLASLTPREERVLRMRFGIGMNTDHTL EEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDQ" /product="RNA polymerase sigma-70 factor RpoD" /transl_table=11 /note="identified by match to putative ortholog SPO1750 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(579902..581911) /locus_tag="Silicibacter_590" /function="COG: DNA primase (bacterial type)" /gene="dnaG" /transl_table=11 /note="identified by match to putative ortholog SPO1749 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="DNA primase" /translation="MSLPPGFLDELRTRISLSDVVGRKVMWDQRKSQPGKGDMWSPCP FHHEKTASFHVDDRKGFYYCFGCHAKGDALKFVQETENVSFMEAVEILAGEAGLEMPK RDPKAAEKQDRRTQLAEVMEQAVKYFRLQLKTQAASEARAYLARRGLDAAALDRWEIG FAPDGWQNLWDALKGKDIADDLILGAGLAKPSNKGKKPYDVFRNRIMFPIRNARGRAI AFGGRAMDPNDNAKYLNSPETELFDKGRNLYNHGPARAASGRGSTLIVAEGYMDVIAL SEAGFQSAVAPLGTAVTDNQLHLLWRMSDEPVIALDGDTAGLRAAMRLIDMALPLLEA GKSLRFAIMPEGKDPDDLIRAEGPEAVQAVLDQAIPMVQLLWRRETEGRVFDSPERKA ALDKSLREKIKLIRDPSIRLHYANDIKELRFQLFRGQRGGGGQGGTGYGQRYGGFKPG SRMQGGFRDGARMPWGAPPPPRSTTRASMVASSEEQDFARVREAVILATAITTPTVIP EFEINLERMQCQDMEHAHLRDLVLRYGIEAPERLRDEIAYALGPDALENLLSLRHVAI SPCVRKPGDLDMASLTLAEEFAKLESIAGLNAELAEAEEDLDGLADEALTWRLRQAAE ARNRAVRSENEDKATYDVGENGARLNRDERDAFGDLLKRIGFNSK" /EC_number="2.7.7.-" CDS complement(581977..582333) /locus_tag="Silicibacter_591" /translation="MIRNIFAAAFVAAPLFASPASADDYGKEDSCKYQGQVMAAVQAA RLDRVPEAKVEETIRASNPEWPENFSNAIPQLTQHVYQMKRRDLKNIDLGEVFETQCV ENWDQIQEMKKNLSGG" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1748 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(582372..582953) /locus_tag="Silicibacter_592" /function="COG: Glycine cleavage system T protein (aminomethyltransferase)" /translation="MTLREGAFVAEIKMQLAAKSPCEGLLPLTIGDVTLTEDMPAAMT LIAPYKGRKDALSKALNAAHGMAFPAPNRATGKVGGRAIWFGRAQALLIGPAADPSLA AHAALTDLSDGWAVVRLEGDQAENVLARLIPIDLRATVFKRGHTARTEIKHMMGSITR IGPKAFQIMVFRSFSETLIHDLKRAMEAVAARG" /product="sarcosine oxidase, gamma subunit family" /transl_table=11 /note="identified by match to putative ortholog SPO1747 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(582922..585867) /locus_tag="Silicibacter_593" /function="COG: Uncharacterized NAD(FAD)-dependent dehydrogenases" /translation="MRVSGKGLLSGNRTVNFSFNGKAYMGLEGDTLASALLANDVHLV GRSFKYHRPRGILTAGSEEPNALVSVGRGAARDPNIRATQQEIFEGLAAQSQNCWPSV ERDVMAVNDLAAPFLGAGFYYKTFMWPAPLWEKFYEPIIRRAAGLGALSGAANKDPYE KAFAFCDLLVIGSGPAGLMAALTAGRAGADVILAEDDSRMGGRLLAEIEEIDGKPAHV WVAEVLAELEAMENVRLMPRTAVTGVYDQGTYSALERVSHHLPPSQSLKTAHRPRECF WRIAAKAAVLAAGAIERPIAFRNNDRPGIMMAGAVRAYLNRWGVAPGERITVFANNDD AHRTARDLVAEGVHVTAVVDSRHDAPDSGEFPVIKGAVICDSAGRQRLESVTIRSVNG EEKLQTDCLAVSGGWNPSVHLTCHMGARPEWNRELTAFLPKPDAVPGMVVAGAANGVF STHGALRDGAEAAATALGKIGRSAAAVAVPEASDAPYQISPLWAVPGKGRAWLDFQND VTVKDVAQAARENFRSVEHMKRYTTQGMATDQGKNSNVAALAVLADATGRSIPETGVT TFRPPFVPTSIAAMGAGAEDQGFLPQRFLTSHKASLARGAANIEVGLWYRASYFAKDG ESTWRQSCDREVTMVRNAVGVCDVSTLGKIDIQGPDAAELLDLVYTNLFSTLKLGRVR YGLMLREDGFVMDDGTTARLGENHYVMTTTTAAAGQVMAHLEYLTQVVRPDLDVRFTS VTDQWAQFSVAGPKARDLIDALVDEDVNGETFPFMACGVITVLGVAGRLFRISFSGEH AYEIAVPARYGEALYERLLERAEALGGGPYGMEALNVLRIEKGFITHAEINGTVTAFD LGMQGLVSKNKSCWGKALSERDGLMHDDRMRLVGLKPVGAAQEMSAGAHLFDPDATVE RVNDLGYVTSVGFSPTLGHMIGLAMLSGGPDRMGDTIRLVDHTRGIDTLCEVVNPVFF DPEGGRVRG" /product="sarcosine oxidase, alpha subunit family" /transl_table=11 /note="identified by match to putative ortholog SPO1746 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(586209..587513) /locus_tag="Silicibacter_594" /function="COG: Glycine/D-amino acid oxidases (deaminating)" /translation="MLHIVETPFEEWAMGFSEKFSGWRVLKEGLTGNKGWTAHWRDPE PKREYDVVIVGGGGHGLATAYYLAKTHGLRNIAVLEKGYLGGGNVGRNTTIVRANYYL PGNSEFYSHSLKLWEGMEQDLNYNAMMSQRGILNVFHNDGQRDAAVRRANSIINQGDD AEILYRDQLKKLVPFLNYDNNRFPIMGALLQRRAGTARHDAVAWGFARGADQYGVDLI QNCEVTGIDVDGGKVTGVQTVRGPIKAKKVALAAAGRSSQVAAMAGLTLPIESHVLQA FVSEGLKPVIDHVITFAAGHLYISQSDKGGLVFGSYLDFYSSYAARGNLAMQEHTMEA ITAMVPAVTKARLLRSWGGIMDMTPDGSPIIDVTPIDGLYLNAGWCYGGFKATPASGD CFAHLIATGRPHEAATRFRLDRFRSGFGLMDEEGTGAQHNLH" /product="sarcosine oxidase, beta subunit family" /transl_table=11 /note="identified by match to putative ortholog SPO1744 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 587651..588337 /locus_tag="Silicibacter_595" /gene="tetR" /translation="MQLPSVFAVLSRLDCHYRLMSVIECMRTRLSRSARRAEILGNAQ KLIAARGFSGTEMEDIRLASGISRGGLYHHFANKHAVLDALVAEEVRRLADQLKAAQG SPIPALLRVGSSDLGNDPGLVSHLHTPEEKRAYLSSLEQAIPAELGPVLHERLRGHTA EGAAPAHVAELFLTITAHINRRRILNEWPPEEAAGFTATALRALLPLLTSQAELQPVI AELKRVAATS" /product="transcriptional regulator, TetR family" /transl_table=11 /note=", Homeodomain-like, Bacterial regulatory proteins, tetR family" /note="Hypothetical protein" CDS 588211..589101 /locus_tag="Silicibacter_596" /function="COG: Predicted metal-dependent membrane protease" /translation="MAPRRGSGIYRDSASGSVALADIASGAPAGHRRTEAGGGDILML IGFLALTFGISLLSFACVVAIPAARTPESAAGLPFWLVMVWGPSLAAILISAQNGQLP ALLLHSIEFSTVPPVVWILVLAPLLMLLMLRPFAPEQRRPVGPGVIAAMVGLNLILGP LGEELGWRGIMQADLNPRIGWLSASLLIGVVWLIWHLPLWTIDTPHSQITLPLFAAHC LLYAVIIGAAYTLSGGSILPAILIHLTVNLASNFATFAGFRDPNAWFKASLWPYLALA AGAVALVYAHLGQFGLWPQP" /product="CAAX amino terminal protease family protein" /transl_table=11 /note=", Abortive infection protein" /note="Hypothetical protein" CDS complement(589208..590638) /locus_tag="Silicibacter_597" /function="COG: Glutamate dehydrogenase/leucine dehydrogenase" /translation="MSNLKEPSFRESVDLMFNRAVALMDLPPGLEEKIRVCNATYTVR FGVRLRGQIHTFTGYRSVHSEHMEPVKGGIRYAMGVNQDEVEALAALMTYKCALVEAP FGGSKGGLRIDPRQYDEHELELITRRFAYELAKRDLINPSQNVPAPDMGTGEREMAWM ADQYARMNTTDINARACVTGKPLNAGGIAGRVEATGRGVQYALQEFFRYEEDKAKAGL SGTLDGKRVIVQGLGNVGYHAAKFLSEEDGCKIVAVIERDGGLYDENGLDIEDLRAWI EKHDGVDGYPSGRYIKNGAKYLEEDCDILIPAALEGVINLSNAENVKAKLIIEAANGP VTAGADEILRKKGTVIIPDMYANAGGVTVSYFEWVKNLSHIRFGRMQRRQEEARHQLV VDQLEMLSESMGKTWSLDPKFKEKYLRGAGELELVRSGLDDTMRIAYQSMRQVWHERD DVSDLRTAAYLVSIDKVASSYRAKGL" /product="glutamate dehydrogenase" /transl_table=11 /EC_number="1.4.1.3" /note="identified by match to putative ortholog SPO1743 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 591025..592773 /locus_tag="Silicibacter_598" /function="COG: Flp pilus assembly protein TadG" /translation="MKVNFWTSSALTGALGRRAIVDRMRQFRRDESGVLAKPMIMIVV LMFMIGGLGMDMVRLERDRTKLQYTLDRAVLAAADLDQPLDPEAVVLDYMSKSGLGDY TTVVVPEVSPTAKRVKASVDTNFTASWMNNVFYDDYIRNPDTYQLEPITLPLLASSTA VESIGNVEISLVLDVSGSMRSNDRLVNLKRAAKEFVQTMDDNTEDGKMSISIVPYSTQ VSMPEAFLDELNVSSEHDYSHCINFSGSDFNNAGISTTQAYERTMHFTVWNSGDYRSR TRLVRQPTCAAHSDNPERTALLLSDNVTQLQNYIDAFVPSENTSIDLGMKWGSALLDP SVQPVIASLADDANPNQSIASRFANRPVPYTDTETLKVIVMMTDGQNTSQYYLRNSYR EGDSPVWYNAQERVYSTYDPNRGSKPYYWDNLQRWADHPYGNGTYEETYCTGTLYYGN CYYGSWQTRTVDEPGTAVQLSYPDLFADTSLRYLRDRLFGDWMSNANYYWFSGLFSSV GSTTKDARTLDICEAAKAKGVVVFTIGFEAPSRGQEVLQACASSASHYYDVDGLEISD AFASIASAIRQLRLTE" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1742 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 592770..593318 /locus_tag="Silicibacter_599" /function="COG: Flp pilus assembly protein TadG" /translation="MIHLRFISKPLRQFRRDEEGNATVEFAMLFPLMLMVLFASVELG MITFRQIMLDRAMDMTVRDIRLGTGGDMQHDDIRDTICARTSFIDQASCDVSLKLEMV RLDPFNWAGIPPEPDCVDSVEEVDPVLTFTNGASNDLMYLRACVSIEALFPHWGLGKA IRKDDDGRLNLFASSAFVQEPQ" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1741 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 593322..593927 /locus_tag="Silicibacter_600" /translation="MFRKIAHKFRAFRRDEEGNIAVEAALYLPLLLFVFAATYTLFDL FRQETVNTKAAYTVSDLISRETTALNDEYINSIYTLGKLMARAGSDMSMRISVIRWDA ADDRYYVDWSVERGNQLDIWTDATVTAINDKLPTMPDQERVIVVETWNNVDPAFKIGI GQREIYNLIFTRPRFASLVAFEGTVVSDGTVHDDDVTDTGS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1740 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(594037..594471) /locus_tag="Silicibacter_601" /translation="MTENLPTIAQAKAMAREWRAARQQAGESLRHGAALEHVARQLGF RDWNLCAAMLSQAEAQRYQPGQVVRGRYLSQPFSARVLRATAVEGRVGWVRLELDLEV PVDVVTSQRFSSFRRRVNGVIGPEGFSREQTSDGQPHLVIDP" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3390 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(594468..595850) /locus_tag="Silicibacter_602" /translation="MSTSPPNRFLTARLGPVYAKTALPIIFVMGMNGFLTVADALFLG HFVGPEALAAVTLMFPGYMLVVALATLVASGMSSRLARHLGAGDTEAAQADFAAAHGL ALSVAVGLMAAFALWGSAVAHAAAGGDRLLADMGHTYLRITVGCTPLLFVLSVNSDAL RNEGRAGLMALMSLVVSLSNIAFNYLLIAQAGLGVAGSALGTALAQVLALSLIVAFRL RGDTVLRPSCLWRQSLWGGWGRMLALGAPQSLNFIGIALGSAVIMFALQWVDVSDYAT TVSAYGVITRLLTFTFLPLLGLSHAMQSITGNLYGAGQILRVGQSLRFAVVSALIYCA VMQAGLTWGAAWIAAWFVDDQGVIEDVARILPILGALFVLAGPLMMVAMHFQAIGDAP RAALLGLSKPYLFSIPLTFMLAALWGEPGIWLAAPVAEAGLLVLTGLVLLDLRRRRDQ VTSKVQERRA" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 596156..598870 /locus_tag="Silicibacter_603" /function="COG: Ammonia permease" /translation="MSDLDASWILVCALLVLLLQAGFLCLEAGTVRAKNSANVALKNL SDVCIVSTCFWLVGFGLMFGESFNGLFGTTQFWLALDNDSGHAASIFLFQMAFAASAA TIVSGAVAERERFLGYMVVSVALSALVYPVVGHWIWNQAGWLRQMGFVDFAGATVVHS VGGWTALVTIIILGPRLGRYGPKKRRFDEYSISLVTLGGLLLWVGWGAFNGGSAMAFG TGVGPIIARTMLLAAGAGVASIAIGLGLFRHVRAELLVNGFLGGLVAGTAGVHLMTGT VAFGIGALGAVTVIIARDILDALKIDDVVGAVPVHLAAGLIGTLSIAFTAPVDLLPAG SRLAQLGIQALGITAVGGWVVCSMAPLILLLRARGLLRVHPKDEVRGLNLTENNQRNA LMDLLAEMKRHQRSGSFSRRVRIDRSTEYGVLAYRYNRVLDRVEAEINARVDSIRKER MSRLLAEEAFESMREAQEENAWSARHDKLTGLGNRKYLEEVAVETSTGPLGATLLIAI DLDRFKEINDTYGHEAGDVVLEHTAQRLSEKIRTGRDFAFRIGGDEFVVLMEFAGTQD DAFEYCSDLLFELLQPVRYKATDLQVGASIGFALCKPPETLGAALRRADLALYASKAD GRSCVNAYSASIGSAHDEKMNLIRDFKQAFANNEIEVTLQPQIDGKTMEIAGCEALAR WHHPVRGIVSPDVFVPVAKEVNMLADLDRRILDLALAAYWNFASHGIALPSLSVNVSA ERLGHPDLIKELQQREDLPPDGLAFELLETVFLDQLTENYANQIAALKAMGIAIEIDD FGTGHASIAGVLALKPDRLKIDRMFTSGIDEKPARRDLMRGLIEMAASAGAETVVEGV ETEAQAQVLSELGADVLQGFAFARPMDQERFLLWAQDWNAARQMPKTG" /product="Ammonium transporter 1, member 1 (AtAMT1;1)." /transl_table=11 /note=", Rh-like protein/ammonium transporter, Ammonium Transporter Family, amt: ammonium transporter" /note="Conserved hypothetical protein" CDS complement(598928..599419) /locus_tag="Silicibacter_604" /translation="MSHEIDSGEVLATVEASPARRVIGVAMLIGLGLMTLYVAMASTP GVAWQGFLMLVSGLALWMGYRMWHATAHRIELTAAGLRCSDGTEIIRIQDLQHLDRGF FAFKPSNGFLMRSTTSAERCWYPGLWWRMGRRIGVGGVTPGSQTKTMTEILAALMVER DAG" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1739 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(599502..600221) /locus_tag="Silicibacter_605" /function="COG: Predicted transcriptional regulators" /translation="MHTFTQIDLASGLWEIFGKIRKNMSETTGKESSFSADTHSAVLD EGEKQRIRLELGRRVKGLRSAAGMTLEQAAERTRLAVSTIYKIENGKVSPSFENLLRL ARGYGVGLEKLIAEPEDEVHTTRLTVTRAGQGRSVEGKVYDYEVLCNGLTGKKIIPLI GTICAKGEGVPAHLDRHDGEELLLVLEGEVELRVEHYEPVILAAGDCAYYDSTLRHGV RSTGPDKARVFWACTHLGALS" /product="Putative HTH-type transcriptional regulator ycjC." /transl_table=11 /note=", Lambda repressor-like, DNA-binding, Helix-turn-helix" /note="Conserved hypothetical protein" CDS 600744..602198 /locus_tag="Silicibacter_606" /function="COG: Na+/H+ antiporter" /gene="nhaC" /translation="MPLQKTDIRPSIGLALLPIVLTLAILGVQIFYFGDFTPHIPLAI GIALTAVVGLIEGLSWDEIEKGAFHVIAVSFPAVSVLILVGMIVGTWIASGTVPTLIY YGLSLLSPELFLAAGMILCSIVSLALGTSWGTVGTVGLALMGIGEGFGIPAYWTAGAV VSGAFFGDKISPLSDTTNLAPAVTDTQLFDHIRNMLPTTVPAMLIALAIYTVMGFNLG DGAPSFERIESFKGALEGSFDITPWLLLPALLVVGLAMMRMPAIPTLFIGVVVASLIA IFVQGASLHDVFTYANYGYSVETGVAAMDSLMNRGGIQSMMWTISLILIALGFGGALE RTGCLAAIIELLTKRVKTIAGVQTSAILSSMATNTVAGDPYLSIALPGRMFKPVYDRI GYSRLNLARATEEGGTIISPLIPWNAGGAFVISALALGVSDGKIENLLYIPLSFACWL APVFGIFYAWTGLFTPKAEAADTVRAEAAQHPAE" /product="Na" /transl_table=11 /note=", Na(+)/H(+) antiporter (Sodium/proton antiporter) (Sodium/hydrogen antiporter)., Na+/H+ antiporter NhaC, Na+/H+ antiporter family, antiport_nhaC: Na+/H+ antiporter NhaC" /note="High confidence in function and specificity" CDS 602341..603252 /locus_tag="Silicibacter_607" /function="COG: Pirin-related protein" /translation="MSLRPILEKRSAQPTMEGAGVHLHRAFGFQDPSELDPFLLFDDF RNDHPELYQQGFPWHPHRGIETITYVLAGSVDHGDSLGNTGTLGAGDVQWMTAGSGIL HQEMPSGNQKGQMHGFQLWGNLPSAQKMTAPRYQDVQGKDIPEVIDDDGTRVKVIVGE FWGKRGPVDGIAADPQYLDVYVPAGVKKTFKIDTYRRAFAYIFEGQAAFADASQPQGV LLEKEVAGQEVNIRDLSGDRTLVRFGTGEEITVQAGPEGVRFLLISGAPIEEPVAWHG PIVMNTQAELQKAFSELRNGTFIKPAH" /product="pirin domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1737 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(603569..604057) /locus_tag="Silicibacter_608" /function="COG: Acetyltransferases, including N-acetylases of ribosomal proteins" /translation="MELKDLKSGRLHATEPVQMTAADREALFAPEVVAFLPPGFQNLG SDAARRHLIDALQQEAEVVALSAQDQEIVGLVILSFAHDAAGQRNLGYLFTRRAWGQG YASEMLRALQDQLRGTHVVLSGGVMAENAASARVLEKCGFEPGEKTASGEMTYVWDAA QG" /product="Hypothetical P20 protein." /transl_table=11 /note=", GCN5-related N-acetyltransferase" /note="Conserved hypothetical protein" CDS complement(604062..604691) /locus_tag="Silicibacter_609" /function="COG: Transcriptional regulator" /translation="MPLLSEHMFRYSVYMARTQGSHSDITGPRIRAAAQELFARHGYA AVSMRQIAGAVGVQAGALYNYTADKQSLLFDLMQAHMEGLLTAWAAEDLPEDVMGQLE RFVRFHIRYNLERPDAVFIAYMELRNLTDENFARIEERRRTYENQLEGILKAGVTQGL FQVPDTKIAALAVIAMLNGVLTWYRDGGRLSLVEVETLYWDMVRKSVGV" /product="transcriptional regulator, TetR family" /transl_table=11 /note="identified by match to putative ortholog SPO1736 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 604775..605077 /locus_tag="Silicibacter_610" /translation="MTATPAARLFFAPTPRSTRLGVLLACTLLSLATACSRVPELEDR LPADLRSQPYPDLLPLETALSDEPLPEDESAALSEALDARAEGLRRRAEELRRRQF" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 605173..606459 /locus_tag="Silicibacter_611" /function="COG: Homoserine dehydrogenase" /gene="hom" /transl_table=11 /note="identified by match to putative ortholog SPO1734 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="homoserine dehydrogenase" /translation="MTEPLRLGIAGLGTVGIGVVKIIRRHAALLEARTGRPVVITAVS ARDATKDRGVSLKDYAWETDPVALATRDDVDVFVELMGGHEGPARLATEAALAAGKDV VTANKALLAIHGQDLAERAEANGSVIRFEAAVAGGIPVIKSMTESLAGNEITRVMGVM NGTCNYILTQMEATGRGYNALFEECGKLGYLEADPLLDVGGIDAGHKLALLASIAFGT KPAFDDVKLEGIQRIAIEDIRHAADMGYRIKLLGVAQRSARGLEQRMTPCLVPANSPL GQLEGGTNMVVIEGDAIEQVVLRGPGAGEGPTASAVMGDVLDIARGLRISTFGQPATT LSKEPAAQTGLPAPYYVRMALQDKPGALAKVAAALGDAGVSIHRMRQYDHATTVAPVL IVTHKCTSAMLEQALEALAATGVVEGAPVALRIEEL" /EC_number="1.1.1.3" CDS 606636..607619 /locus_tag="Silicibacter_612" /function="COG: Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins" /gene="glpX" /transl_table=11 /note="identified by match to putative ortholog SPO1733 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="fructose-1,6-bisphosphatase, class II" /translation="MTSTTADAPFHDRLLSLGLARVAEQAALASAPLIGRGDEKAADQ AAVNAMREQLNLLDIAGVVVIGEGERDEAPMLYIGEEVGTGNGPGVDIALDPLEGTTL TAKDMPNALTVIAMGPRGSMLHAPDTYMDKLAVGPGYPEGVVSLDMSPRERVEALAKA KGCTPADITVCILERPRHEAMIAEVRETGASIRLITDGDVAGVMHCAEAEVTGIDMYM GQGGAPEGVLAAAALKCMGGQIFGRLLFRNDDEKARAAKAGITDLDRVYSRDEMVTQD VIFAATGVTGGSLLPRIKREPGWVETTTLLMRSKTGSVRRMSYRTPLSAHQ" /EC_number="3.1.3.11" CDS 607667..609478 /locus_tag="Silicibacter_613" /function="COG: Single-stranded DNA-specific exonuclease" /gene="recJ" /transl_table=11 /note="identified by match to putative ortholog SPO1732 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="single-stranded-DNA-specific exonuclease RecJ" /translation="MGKDEGRVPRGSGLFYTEDEGIELSFLGVETSLTGRRWVGPGVD QARASEHLAQETGLPPAVCQVLARRGVPAHEATGFLTPQLKDLLPDPRRMKDMETAAA RFLQAVERRERIAIFADYDVDGGSSAALLLVYLRQMGQQATLYIPDRIDEGYGPNDAA MAALARDHDLIICVDCGTLSHGPIAAAKGADVVVLDHHLGGETLPDCVAVVNPNRQDE DGDLGYFCAAGVVFLMLVEVRRQARDKGLGAGPDLMAMLDLVALATVADVAPLIGANR ALVRQGLKVMGRRQRPGLVALADVSRMDAAPSTYHLGFLLGPRVNAGGRIGKADLGAR LLSTDDPHEAAALSERLDQLNTERRDIENAVRAAALEQAEARGFDAPLVWAAGEGWHP GVVGIVASRLKEATGRPAVVIGLDGEEGKGSGRSVSGIDLGASIQKVAMEGLLLKGGG HKMAAGLTVARGQLEPAMARLAELLDKQGAGDLGPADLKLDGMLMPGAASVELIEQIE QAGPFGAGAPAPRYGFPDVAVRFAKRVGESHLKVSFTDGMGGNIDAIAFGAFDTNLGP RLLEHGGARFHVSGRLEVNTWGGRQSAQLRLEDAAEA" /EC_number="3.1.-.-" tRNA 609593..609664 /locus_tag="Silicibacter_20" /gene="Silicibacter_20" /description="RNA" /note="Created by Search for RNAs Autoannotator" tRNA 609882..609953 /locus_tag="Silicibacter_41" /gene="Silicibacter_41" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS complement(610016..611413) /locus_tag="Silicibacter_614" /function="COG: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs" /translation="MPSDLPAFMPDRRSDVPIFEQICTALRSRIRSGALATGARLPAT RALAGDLGVARATVVTAYEQLVAEGYLMARRGSGYTVCAMGEVELPAKGTPTPPADLS ERGDLLLEAGQPDMRLFPHRAWAKAVARLCRTRPEDMLMGCGRFGHPDLRQAIAAHVN DWRGIAARPDQVLVTSGATEALDVCLAALASSTGAVGVEDPGYPPIRRFAQAQGRRIR DLALDSQGAEVPTTGDGTDVVVLTPSHQYPLGGAMSAGRRQEFVRWAAQSQGWIIEDD YDSEFRYAGRPIPALAGVDGQGRTVYIGSFSKIFSNSLRMGYIVAPEALVERLVRAMR RKGARASAMPQAALAEFMQHGEFYRHLRRVRRIYAERHRTLIARLRSDFSDVGHVEDY QAGMQVVLHLRPEICDQTVTTAARAAGVGAEALSSYSRRAGAFNGVVLGACLNDLDEQ AEALSRLRATISSTG" /product="transcriptional regulator, GntR family" /transl_table=11 /note="identified by match to putative ortholog SPO3185 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(611521..613602) /locus_tag="Silicibacter_615" /function="COG: Anaerobic dehydrogenases, typically selenocysteine-containing" /translation="MSRQARSSQDTRVVPSVCPLDCPDTCSLSVEVTGDQITAVRGSN ANPFTAGVVCNKVTRAYPDFVHGPARLTHPLRRVGPRGAGTFERISWEDALDLVVEGF HAAIDAHGAQSILPLNYAGPHGELAGGSLDRRFFYRLGATRMDRGPLCGGVRSLAYES LYGNAPGMPPEQAQHADLIVVWGNNVTVSNLHLTRIVKAARAKGARLVVIDPKRIKIA EQADLYLQVRPGTDVVLAHALAAELERRGAFDAEFIAHWVHGVDEYMDEARKHSVENA SEICGLAVSDILKLADWMQTAQRLATSTGNGMERGRSGGSGLRAAMALNALLGQHGRL GAGVVAKSGLASPKTRARLQGDHLIDPETRVVNILDVAQLMLDREQSTPINAVMIYNH NPVATHPDQTRMIAALSQPEIFTVGCDVVMTDSMAYCDVILPAATHFEHDEIFAAYGQ NYVQRAEPVIAPIAESLPNTEIFRRLAARFGYIEPEHQASDVQLMDDAMDASHPQFEG RPPSQMPVDRALEMQKSDGAALVLCETVTPDTETGRIELFSAALEAETGFGVPRYDPV SQDLPLVLITPSSDKRINATFGSAPLSAGPESIEVHPEDAAARGLQDGDLVEVANARG SVTFRLKISDAMQRGVTYAPKGTWRISSKTGLTANALIPVEVRTDIGDGACYNETFVE LRAYAGVRAAE" /product="oxidoreductase, molybdopterin-binding" /transl_table=11 /note="identified by match to putative ortholog SPO3183 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(613797..614819) /locus_tag="Silicibacter_616" /function="COG: FOG: GGDEF domain" /translation="MMTFEQLTGLADQLCPMHVIIDADGLIVSHGPTLDKIRGDNGWL GKPVLEVLDLQRPRSVKAVADLMNTAGSKLHFQLHDAPHTRMKGVLVPLPKGRGAFIN LSFGISVLDAVRDFNLTSQDFSPTDLTIEMLYLVEAKSAAMEASRQLNLRLQGAKIAA EEQAFTDTLTGLKNRRAMDHVLNRLISGGRDFALMNVDLDFFKSVNDTYGHAAGDAVL QRVASIMVECTRKSDTVARIGGDEFVLVFEGLMDRNRINDLACRLIERLEEPIMYGAD ECRISASAGTTLSTDVAQPLPATLLHQADLALYASKRAGKAQHMFYTPSLEDEMDLVE QNSKSA" /product="Phytochrome-like protein cph2" /transl_table=11 /note="Phytochrome-like protein cph2 (Bacteriophytochrome cph2)., GGDEF, GGDEF domain, GGDEF: diguanylate cyclase (GGDEF) domain, , belas" /note="High confidence in function and specificity" CDS complement(614816..615403) /locus_tag="Silicibacter_617" /translation="MHGLINRAVQAFVTSTYGDKRWADIMDESGLGFTEFEAMLVYPE DQSIRMLRAVEAKLERPLDEILEDVGTFLVSNPQVEALRRLLRFGGVNYVEFLHSLDD LPDRARLAVSDLHLPGLELIEQAPGQFQLLCQPGVPGYAQVMTGVLRAMADDYGALVI LDLVGEQEGSDVISITLVESDFSEGRAFELGAHTL" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2748 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(615819..617378) /locus_tag="Silicibacter_618" /function="COG: Trimethylamine:corrinoid methyltransferase" /translation="MSQTQARRRRGGGRAGAAARRGAATLEQMPWKPPVNIDRPVEPL TAEGIAAIHDGAMRILEEIGVEFLNDEALEIFKEAGLKVDGALVRMDREFVMEMVGKV PSEFTLTPRNPERAIRIGGNSIVFGNVSSPPNYWDMDLNKKVPGTREHCQNLLKLTQY FNCIHFAGGYPVEPVDLHASIRHLDVLYDKLTLTDKVMHAYSLGKERVEDVMEMVRIA GGLSHEEFDSQPHMYTNINSTSPLKHDEPMIDGALRLVRRGQPVIVSPFTLAGAMAPV TMAGAVAQSLAEALCAIALFQYVRPGTPCAIGTFTSNVDMKSGAPAFGTPEYMRATQM TGQMARFYGLPMRSSGVCAANVPDGQAMWETSNSLWAAVQSGTNMVYHAAGWLEGGLI ASPEKFIMDCEVLQMIQRYMDPVINATGPEEIALDAIREVGNDGHFFGIQHTQDRYAT AFYQPFLSDWHNYEAWEAAGGTWTAQRANGLFKQIINEFEAPTLDEGIREELQAFVAR RKEEGGAPTDF" /product="trimethylamine methyltransferase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO2750 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(617508..618200) /locus_tag="Silicibacter_619" /function="COG: Predicted phosphatases" /translation="MTLSALLFDKDGTLFDFAQTWNGWALGMLTELAGEDTGRLGAMA EAVRYDLTERAFHPDSLVIAGTNDEVAEVLSPHVPQMSETDLEQYLIRTAGEAELAQA VPLAPFLSDLRASGLKLGVMTNDGAHSAQRHLTRSGVYDQFDMVIGADSGFGSKPDPD PLLAFCSHVGVAPGATAMVGDSRHDLIAGRAAGMRTIGVLTGLARAEDLADLADVVLP NIGHIPDWLAQA" /product="HAD-superfamily hydrolase, subfamily IA, variant 1 family protein" /transl_table=11 /note="identified by match to putative ortholog SPO2751 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(618237..618521) /locus_tag="Silicibacter_620" /translation="MPFSADRAEVLGLKALTWLAGNEELLPIFLGSSGASLSDLRDRV NDPEFLGAVLDFLLMDDSWVMAFCDHEGVPYPSLVEARATLPGGEQVHWT" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2752 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 618638..620041 /locus_tag="Silicibacter_621" /function="COG: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /translation="MQGTILVIDGVSTNRIILKVQLTAACFQVLQADSLSAAMALMKD NRPDLVLTAMTLPDGDAADVKRALDRVRHGVGVPVIALCPQNDRGTRIMALSAGIDEV LPLPVDDMILQARIRSLLRMRMQDDELHLREEGVAAFSVPLKDTTAVQITQSDATVAL VCHDLQTAQKWKSRLSASVDFRLKAYNVDAIQDLMRTPVPDVIVIELNEHSAGMALRL LADLRARISTRDSVVIAVPNPADASIAAEALDRGAHDVLHCGFQVDELALRITAQLAH QQRAEMIRNTLRDGYRAAMRDPMTGLYNRRYARPFLEQVTQDAQSAGSNFAVMVADLD HFKRINDAYGHPVGDAVLIEAARRLQAELRGCDLLARIGGEEFMLVLPDLHPDEASTV ANRLCRAISGSPFVVKGCAQPLEVTISVGAVVAQHGTQPLSADDLFVAADRTLYEAKH AGRNQAAIKGLTQSAAA" /product="response regulator/GGDEF domain protein" /transl_table=11 /note="GGDEF, GGDEF domain, GGDEF: diguanylate cyclase (GGDEF) domain, , belas" /note="Hypothetical protein" CDS complement(620087..620560) /locus_tag="Silicibacter_622" /translation="MPRWLKAVFALSLAGNLAVVGIMVGAALREGRPGPHRHKAPPPA AADAIGAVMYRSFDDAERRALRRLASGKHGDIVERRLAELNVLLEVIQQDPLDADRLR AEIDAQSQSAQAFRSSMHEVWIAELQKMTPAERAGFAEKVRDHIARFRKPREDRP" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(620593..620988) /locus_tag="Silicibacter_623" /translation="MGNKLNSQTEIDDLDALFAEARATRPEVPASLMESILADAADAQ AGHLSSTATEPPRRGPIEVLIAALGGWPSLGGLVAASCVGLWVGINAPDLMLETPGLQ TLARTGSETTDYAAYETFDLATVLAEDLQ" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(620981..621607) /locus_tag="Silicibacter_624" /function="COG: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog" /translation="MTAETGVDRAHGATRATFVEPALSDEALLIRFGNGDPSAATELT RRLAPRVLSLATRVLGNRAEAEDVTQEAMLRLWKIAPDWRNGEARVSTWLYRVGMNLC IDHKRRVRGGHVDLDAIPEPPDPAAGAAEALQEGARRDALQDALMTLPERQRQAVVLR HIEELTNPEIAGVMEISVEAVESLTARGKRALAAALAGRREELGYQDG" /product="RNA polymerase sigma-70 factor, ECF family" /transl_table=11 /note="identified by match to putative ortholog SPO2756 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(621678..622181) /locus_tag="Silicibacter_625" /function="COG: Ca2+-binding protein (EF-Hand superfamily)" /translation="MKKQILIASLLTLTTALAGGQVLAKQGFGPRHEKPTFEQLDANG DGALTQDELAARGQARFAEADQNGDGVLSADELNARAQERMARRTAKMIERFDTDGDG GLSAEEMPRRHGAINLLEKADTDGNGSISKAEFDTAQAIVEEIRKRQHHRGGPEKHRA GAGQDSE" /product="EF hand domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO2757 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 622447..622878 /locus_tag="Silicibacter_626" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MTDTQGLTPQHASVDEERQTKPALWKGWRGRCPNCGEGKLLHSY LKVNDSCSECGEEFHHHRADDGPAYLTILIVGHLMAPLMHYMAFEWRPSPWVMASVFS TGCLAASLYLLPHLKGVVVAYQWARRMHGFDKTPKEKTSAA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2758 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 622967..623695 /locus_tag="Silicibacter_627" /function="COG: NTP pyrophosphohydrolases including oxidative damage repair enzymes" /translation="MAATGASDTSIDKTTIRDAATVIVVRDSKSDDPKVLMGQRGAKA AFMPNKFVFPGGAMDLGDREIALAGDIGAPCRNRLQEDGGAEVWRALCVAAARELWEE TGLILGQPGYWPAEVPKDWQSFAATGHVPDASALTFVFRALTPPGRPRRFDARFFLLK AEDLRGDLDDFSRASDELSHLQWIPLSQVRSFDLPFITEVVLAEVTANLRHESPPEST PFFRNDDEESLFLRLHGRPMSQAD" /product="hydrolase, NUDIX family" /transl_table=11 /note="identified by match to putative ortholog SPO2759 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(623722..624624) /locus_tag="Silicibacter_628" /function="COG: Permeases of the drug/metabolite transporter (DMT) superfamily" /translation="MPLWIPVTLAAASFQTVRFMLQKVLSSVTLSAAGATFSRFVYSA PLILLLLWAYVGATGAELPALSAAFWGFAIIGGLSQILATVCVVALFKERNFAVGITF KKTEVIQTAIVGLVILGDEVSPLGWVAILIGLVAVLVLSKTKDGPKGLWGQLTGRAPL LGLGSGVLFAFSAVSYRGASLELQEPDAVLRAAVTLGVVVCLQTAMMLVWLLSRDPGE ILRVWDARRVAVWVGLTSMGGSFCWFLAFTLQNAAYVKALGQVELLLSLLASLLVFKE EVTRREIIGMALLVLSILALILAL" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1442 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(624670..625695) /locus_tag="Silicibacter_629" /function="COG: Fatty-acid desaturase" /translation="MHDMSAMQPASRTAESAIGMPENLLEVPPAIDVAEAEARAVLPK HPEWGTFLLIVACYLLWAGALFGLAQVSQALAVVAAGLMVALHSSLCHEVLHGHPFAR RALNEALVFLPLNLCVPYGRFRDTHLAHHQDENLTDPYDDPESNFMDPEIWARLPKWR QSLLRVNNTLLGRILLGPMIGQICFMQTDWRLARNGVCGIGRDWLLHGIGILLVLGIV SLSEMSVLAYLGAAYIGLALLKIRTYLEHRAHEDMHGRTAIVEGRGVLGWILSFLFLN NNLHIVHHLYPGVPWHRLPRLYRQHRARFQDRNDGYVLPSYASVFRQFAFRAKDPVPH PLWKSSE" /product="fatty acid desaturase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1441 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(625688..625894) /locus_tag="Silicibacter_630" /translation="METRGRSLVKAIVWNVIGLISMTAVGFIATGSLSAGGMMAGINT ALGFLSYLIYERVWAGIRWGRHHA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1440 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 625999..626868 /locus_tag="Silicibacter_631" /function="COG: Predicted transcriptional regulators" /translation="MTDKIDKRLRAVQFRDRLERALRDSGLSQSALARATGVDRSTIS QLLTDDGARLPNAHVIGACAEALGVSADWLLSLSERPESAAELLASSIAMTEAPRALV DERIYEWHREAAGYKIRHVPATLPDMLKTRAVLEWEYAPHLGRTADQAIGASEDRLTW MRQAGSDYEIALPIYEVDSFAKGVGYYEGLSAEIRIEQLEHLERLTTQLYPRLRVYLY DAKRLYSSPLTVFGPLLCVFYAGSHYMAFRDRARVETYTGHFDRLVREADITARQVPG RLRALRAQIGVAT" /product="DNA binding protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1439 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(626939..627691) /locus_tag="Silicibacter_632" /function="COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /gene="linC-1" /transl_table=11 /note="identified by match to putative ortholog SPO1437 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase" /translation="MRVLVTAGASGIGRAMAEGFVATGAEVWVSDVDRDALAALPDGW NARQVDATDEVAMRALFAEIAQAGGLDVLCANAGVAGPTALVEDIQLEDWRACVSVNL EGAFLAAKYAAPLMKAAGQGSIVLTSSTAGIYGYPNRAPYAAAKWAVIGLMKTLAMEL GPFGIRANAICPGAVEGPRMEGVLAREAALKGMSRDAVHEGYAAGTSMRTWVTAEDVA NMAVFLGSEASRRISGQVIAVDGHTENPDPKV" /EC_number="1.1.1.-" CDS complement(627691..629166) /locus_tag="Silicibacter_633" /function="COG: 3-hydroxyacyl-CoA dehydrogenase" /translation="MTKTAAIIGGGVIGGGWAARFLLNGWDVRVFDPDPEAERKIGDV LANARRSLPGLGNVALPPEGSLSYHETLAETVQGVDWVQESVPERLDLKQKVYAELEA HAPGGAVIGSSTSGYKPSQLQDGFTNAAQIVVAHPFNPVYLMPLVEVVTTDVNTPEMI AKAKAIITEIGMYPLHLKKEIDAHVADRFLEAVWREALWLVKDGIATTEEIDNAIRYG FGIRWAQMGLFETYRVAGGEAGMKHFMAQFGPALSWPWTKLMDVPEYNDALVDLIAGQ SDAQSGQYSIRELERIRDDNLVGMMRALGANNWGAGALQNAHDAARLSEAGLARSMED VADLSQPILTQSRVVPLDWTDYNGHMTESRYLDAFAQSTDRLMEIIGCDADYIASGGS YFTAETHIRHIDEVHAGHPVQVRTRVIMGAGKKMHLWHEMYEGDRLLATGEHMLLHVD LKTRRSAPPAAHIEANLVKLAEAHAALPAPEGLGRAIGAPR" /product="3-hydroxyacyl-CoA dehydrogenase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1436 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(629179..629739) /locus_tag="Silicibacter_634" /function="COG: Bacterial lipocalin" /gene="blc" /translation="MIAVAFRSTLAATLVALTLAAPVQAAEYRDTDVAMTVQEDLDLS RYLGTWYEIARFPNRFEQGCAAVTAEYSPLPKDRIKVVNSCRKGGVTGPLETVEGVAR VAGPGKLEVNFVSWLRLLPFTWGDYWVLDVDADYQVAVIGTPKGKQGWILARTPNISA TELEAAKAVLRKNGYDTGALEMVPQN" /product="Apolipoprotein D precursor (Apo-D) (ApoD)." /transl_table=11 /note=", Calycin" /note="Conserved hypothetical protein" CDS complement(629805..630722) /locus_tag="Silicibacter_635" /translation="MPLSMNREVFITCAVTGSGGTQDRSPHVPRSPKEIAESAIAAAK AGAAIVHCHVRDPETGAPSRDLGLYREVTDRIRESDTDVVLNLTAGMGGDIVFGGVER PLPVTEDGTDMIGASARVAHVAECLPEICTLDCGTMNFAEADYVMTNTPGMLQAMGQM MTDLGVKPEIEAFDTGHLWYAKQLVKDGVLKSDALVQLCMGVPWGAPNDLNTFMAMVN NVPDDWNWSAFSLGRDQMAYVAASVLAGGNVRVGLEDNLYLDKGVLAENWQLVERAGT IVSNLGARVITPAEVREKLGLQKRAPITK" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1435 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 630740..631888 /locus_tag="Silicibacter_636" /function="COG: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain" /translation="MYRVVPRVIPRLLPGFQFALICSLAQPWQQELTRSESKLMKSAK NILQPENRPLKTAVLVMDECNTLSFAAAVDPMRAANRLAGRAAFDWDYVSASAEPPML TSGLTVPTTPLARLDDCDLLIVVAGFQLARHATPSLLAGLRRIAGSGATIAGIDGGPW LMAEAGLLDGHAATTHWEDLENFSARFPDIHCRTDRFTVSEGRMTSGGATPAIEMMLH IIGARHGHGFASRVAGLFLYDGTASPQRSQSRLGHHKHNALTAKANAIMEAALDDPKP LAEIAEVLGTSPRSLQQQFRLRLNTTPQDHYLQLRLAEARRLVTDTNLPLMEIAVATG FTSQSTFARAFRTAHGLSARELRQNSAETAFASYPVLKATSHASHSTN" /product="transcriptional regulator, AraC family" /transl_table=11 /note="identified by match to putative ortholog SPO1434 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(631967..633013) /locus_tag="Silicibacter_637" /function="COG: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)" /translation="MKKNRLGRTDMMVTDLCLGTMTYGTQTDEADAHAQIDMALEAGI NFLDTAEMYPVNPIRAETLGLSEEIIGNWNQKTGRRKDYILATKHSGEGSVARDGAPI TGKTIAATVEASLKRLKTDYIDLYQFHWPNRGSYMFRKNWSYDPTASSYNRAQVIADM EECLAALQAQVEKGNIRAFGLSNESAWGTAQWLRLAEEGKGPRVASIQNEYSLLCRLY DTDLAELSHYEDVGLLSFSPLGAGYLTGKYQEGAVPEKSRKSINPEMGGRQSDRVEAA VAAYLTIAADHGLDPVHMALGWCRTRPFMASAIFGATDVAQLAHILEGADLELAPEVL AQIDQAHRAHAMPY" /product="oxidoreductase, aldo/keto reductase family" /transl_table=11 /note="identified by match to putative ortholog SPO1433 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 633068..634513 /locus_tag="Silicibacter_638" /function="COG: Permeases of the major facilitator superfamily" /translation="MQVIERRSWGALPTLLPTCLKSGPFPFACPTPPCTGQRHTAICA ALATAHEKRPPNVENATAPIWQIPMVSPAMRTILSFAALFLSVILLQLSTGGVGPLDA ISGAAMGFDNRQIGLLGSAHFFGFFIGCWWTPRLMGRVGHSRAFAVCTALGAMGLLAH TLTDDPYAWAAMRIASGLCVAGCYTVIEAWINAKVTNENRGRTSGLYRIADTSASLAA QLLIAVLPPAHYISYNLLAILCCATLLPLMMTRASQPEMPAAPRLRPRLAWRCSPLGV AGVIVSALSGASFRMVGPIYGQEVGLVIDQIAFFLAAFVLGGALAQYPVGWLADKFDR RWVLIWLSGVSMIACAVTLPASGGGTIAIMASAAFFGLTTVPIFSVSAAHANDFATSE ERVELSAALMFFYATGAIAAPFIASALIEAFGPGALFVFIAVGHAGLIVFGLARMRSR ATPTERTRYVYAPRTSFTIGKMLKRAREGRQ" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1404 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(634615..635343) /locus_tag="Silicibacter_639" /function="COG: Transcriptional regulator" /translation="MFERVPKGLAFTPVGRSYHNRIAGVFADLRAATAELKPEPNKVL ISVTPTFAAKWLIPNLPDFATAHPNIDLRIMATEKVSSFHSDGIDLAVRQGSPPFGAS LDVTLLFKQSLVAVAAQKLADKGGTPLDPETLAKQPKVHDAHDLWPSYLAHLGVQDQS ARHLRLSQTSLAVDAAIAGQGVALVSRFLVAHDLAAGRLVEVGEAWAPDRNDFYVLMP RTAKNNAPTTNVLTWLKSRSAKDT" /product="HTH-type transcriptional activator ampR." /transl_table=11 /note=", LysR, substrate-binding, LysR substrate binding domain" /note="Conserved hypothetical protein" CDS 635618..636016 /locus_tag="Silicibacter_640" /function="COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /gene="fabG" /transl_table=11 /note=", 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (3-ketoacyl- acyl carrier protein reductase)., Glucose/ribitol dehydrogenase" /note="High confidence in function and specificity" /product="3-oxoacyl-" /translation="MEVYLMNVIRPTRLITPVMQAQGGGAIINISTFAAFEPDPLFPT SGVFRAGLAAFTKLYSDKYASENIRMNNVLPGFIDSLPETEDRKARIPMGRYGFASEV SSLISWLASENGGYMTGQNLCIDGGLTRAV" /EC_number="1.1.1.100" CDS complement(636404..638092) /locus_tag="Silicibacter_641" /function="COG: Uncharacterized protein conserved in bacteria" /gene="yqiK" /translation="MDGSFLLVPVISILALVALIGLVLGRLYRRATREVSLVKTGSGG KKVIMDGGTVVVPLLHEISPVNMKTLRLEVQRSGEAALITQDRMRVDVGVEFYVSVMA TEEGISRAAQTLGDRTFDVEQLREMIEGKLIDGLRAVAAQMTMDGLHENRADFVQEVQ NAVSEDLLKNGLSLESVSLTALDQTPFEALDENNAFNAVGMRKLAEVIATSKKERAQI DAEAEVAVRRAAMEAERHKLLIEQDEQQARIEQMQKVETMRVAQEAEIAARTEDSVRE TERARIAREEAIRAADIERERKIREAEITKERELEVAEQERQIIIAQKSEEESRARAS ADLARAEAIKATEAVATAREVAEAERQKQIVLIEAAREAERQATGIRLAAQAEKEAAA DRAEARREEAQAEADALNIRAEAKKNDMLAEAEGKRALVEADNALSPELVRMKVDLAR IEAMPSIIAEMVKPAEKIDSIKIHQVGGVGGGAAYSSAGASGDKPVVNQALDSIMGMA VQMPALKTLGRELGISMEDGVSGVVNGMLEGNDIAPEVAADPEATDQAKTSEVH" /product="Hypothetical protein sll1021." /transl_table=11 /note=", Band 7 protein, SPFH domain / Band 7 family" /note="Conserved hypothetical protein" CDS 638581..640869 /locus_tag="Silicibacter_642" /function="COG: Methionyl-tRNA synthetase" /gene="metG" /transl_table=11 /note="identified by match to putative ortholog SPO1403 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="methionyl-tRNA synthetase" /translation="MPSQLRTPPPPVTSGAAEPVSASRPSTDSKFRASRSALSSASRS TAPISRSASSSGPPGPSRSASLSPPRRLPPKSNARTSIPTRPSKSARATVNGAKAPSR RRSVICKYSPICMPLYANRYVHACARFQGLGRQIRLEPPRCGAVGQGRMHPKPERFTG FFALHWIMGFSYLPAWDRRAARQATWMDDMARILITSALPYINGIKHLGNLVGSQLPA DLYARYNRGRGHEVMFLCATDEHGTPAELAAAKAGKPVADYCAEMHAVQADIAKRFGL SFDHYGRSSSPQNHALTQHFAGKLEEAGLITEVSEKQVYSNADGRFLPDRYIEGTCPN CGFEKARGDQCEECTKQLDPTDLINPRSAISGSTDLEVRETKHLFLRQSAMRDQLDQW IDSKTDWPVLTTSIAKKWLHDGDGLQDRGITRDLDWGIAVKKGDADWPGMEGKVFYVW FDAPIEYIAAAGEWAEAHGKTDADWERWWRTDKGADDVKYVQFMGKDNVPFHTLSFPA TLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMDQALEILPADYWRWWLLSHA PESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSKFGEEVPDGGTWGEQEQTLI EELSTRIGAFERHMEAMEVRKSAQELRAIWVAGNEYLQSAAPWSVFKEDPERAAGQVR LGLNLIRLYAVLSAPFIPDASDRLFAALGTEDRSWPEDVAAALAALPAGHAFTVPEVL FAKITDEQREEWQERFAGGRSA" /EC_number="6.1.1.10" CDS 641256..641435 /locus_tag="Silicibacter_643" /translation="MSNLKPISQADITAATQPETYPTYHAEDLTRGGVQARILLNGQI YSLRITRAGKLILTK" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0789 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 641487..642755 /locus_tag="Silicibacter_644" /function="COG: Uncharacterized iron-regulated protein" /translation="MKTPLFTGAAVLALAAGTSAAFATSKGEVLINYANIAEAKYEDS LITAKTLQAAVGALIDAPSAETLAAAKKAWLAARVPYQQTEVYRFGNAIVDDWEGKVN AWPLDEGLIDYVDASYGGPTDENAAAVLNVVANPDFSLSGQAIDASEITPELLAETLH EADGVEANVATGYHAIEFLLWGQDLNGTEHGAGARAWTDYATGEDCTNGNCDRRGAYL KAATDLLVSDLEWITAQWAEGGAARAEVLSDENAGITAILTGMGSLSYGEQAGERMRL GLMLNDPEEEHDCFSDNTHNSHYYDGLGIQNVYLGEYVRVNGALVSGAALADLVEAAD PALNSELTAKLATTMMKLGRIKTAAEAGFSYDQMLAQGSTAGEALVMGGVDALVDQTR SIERVVAALELDAVSIEGSDSLDDPSAVFH" /product="lipoprotein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0086 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 643557..645251 /locus_tag="Silicibacter_645" /function="COG: Predicted thiol oxidoreductase" /translation="MVISCLRSCSKSYSQTRKAILISWRPSLNCTTALAPKTTRSSTP PRWTKPSNSVPVLGAALALVLAAPLHATDRPAPAAPGLAEPHLSILPRTTHETRRVER VTAPTEDFAAPEAFEENSAGTATLPHTDDRDAFSQPPANLTFEQGLEFHLGEALFDKL WVFSPASTLASDGLGPVYNARACQRCHIRDGRGHLPEGPDYRSASTFLRISIPGPVPP HLRAIPDYIGMVPEPTYGWQLQDFSAPGVDPEYRLSVTFTEEEIALNGGEVAHLRKPQ FEASALKYGPLDSEAMLSPRVAPPMIGLGLLEAIPAADILALADPDDLDGDGISGRAN LVWSKEFDQVMLGRFGLKAGTATIHEQSAAAFSGDIGISTPLFPQPYGDCTAQQVDCR AAPHGDEDLRGTEIDQPNMDLVTFYSRNIAVPARRNLDAPEVLRGKSVFYEIGCTSCH TPKFVTHRLIDRPEQSFQLIWPYSDLLLHDMGEGLADNRPEARATGREWRTAPLWGIG LTQQVSARATFLHDGRARTLLEAILWHGGEAQAARDRVVALPPADRAALISFLESL" /product="conserved hypothetical protein" /transl_table=11 /note=", Protein of unknown function DUF1111, Protein of unknown function (DUF1111)" /note="Hypothetical protein" CDS 645251..646279 /locus_tag="Silicibacter_646" /function="COG: Predicted periplasmic lipoprotein" /translation="MPLLYRLTATACTVACTVLALSSAARADALAEAVIDQHILPTYA QLASESAEFATLAQSDCAPTSEAVRNAWGAAFDAWVAASHLRFGPSEVDNRAFAIAFW PDSRSKTPKALRSLLTNRSPVVDTPEDFATASVAVRGFYALEYLFFDPAYADLGDPDY ACAFVQAVARDLARNSAAILDDWEQDYADQLRTPAARYRSETEAHQELFKALTTGLEI LADMRIGRPLGTFDAPKPNRAEARRSGRSLRHIEIQLQSLRELALLLSANDGALTEHL TQVFDKADRHADQLSDDPSLAGITDPQKRFLLETLQQDVFEIKEIALRDLGPKLGVEA GFNALDGD" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0089 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 646316..647416 /locus_tag="Silicibacter_647" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MPSRRGFLAGLLASSVTPTATWADVGAPAYLSAGKDALGLFVMA GLSAAGEVLFRHPLPDRGHAASAHPTRPEAVAFARRPGRFADVIDCRSGAQLARLEPP EGHHFYGHGVFSPEGEVLYTTENDYARGAGVIGVWNAGDYHRIGQFSSGGIGPHEMLL RRDAPGLVVANGGIETHPESGRAKLNIPFMRPNLSYLRLSGEIQHQMELPADLHKNSI RHIAVRSDGAVGFAMQWQGDLGADVPIVGLHQPGSAPRLMAEDDPRLRNLNGYGGSIA FSGDETAIAVTSPRGGVVQVMDCTSGALQAEHALSDVCGLAPLKDGFLVSTGTGIMAQ IGTEVTTLTQAPLAWDNHLIALSSAASAPRQP" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0090 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 647561..648355 /locus_tag="Silicibacter_648" /function="COG: Transcriptional regulators of sugar metabolism" /gene="glpR" /translation="MDANDRQNEILSLLTQQDRVEVEDLAQRFGVSLQTVRTDLRDLS ARGQLSRVHGGAMRISSASNRGYAERRSLNATGKRAMAALAAEVIPENCSIALNIGTS TEQVARALSGHKGLTVLSNNINIINMMMEMETRDLILVGGSIRQSDGAIVGEEAVEFI NRYKVDYAVIGASAMDADGAILDHDAREVSVARAILKNARTRILMCDGSKFDRSAPVR ICALAELDLVITDRPVPAEFAEAAEAAGTRILIADGGAENESSAND" /product="glycerol-3-phosphate regulon repressor" /transl_table=11 /note="identified by match to putative ortholog SPO0731 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 648348..649928 /locus_tag="Silicibacter_649" /function="COG: Glycerol-3-phosphate dehydrogenase" /gene="glpD" /transl_table=11 /note="identified by match to putative ortholog SPO0732 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="aerobic glycerol-3-phosphate dehydrogenase" /translation="MTDSSQSTEITDLFIIGGGINGCGIARDAAGRGLSVTLAEKNDL ASATSSASTKLFHGGLRYLEYFEFRLVQEALIEREVLLRAMPHISWPMRFVLPFHKDM RFDNTTPTSKLLTTFMPWMKGRRPAWLIRLGLFMYDTLGKRGILPGTTTVDLTRDEAG KPLQSKFKKAFEYSDCWVEDARLVVLNARDAESRGTEILTRTEVINATRHADHWEIRL RDLATGEEETRRAKMLVNAGGPWVADVLRQKLGQNSRENVRLVRGSHIVVPKLYDHGR CYFFQGQDGRIIFAIPYEEDFTLIGTTDADHPDPETKPVCTEEEQDYLVRFASNYFER PVTREQIVWTYSGVRPLYDDGASSASAATREYVLTLDTAQAPLLNVFGGKITTYRKLA EAALEKINEVFPELPEKWTAGVALPGGDFPVEGVTELGAKLAQDYPFLTPYAVRRLIR AYGTEAWDVLGDATTPSDLGEDFGATITARELDWTIQNEWVRSGEDYLWRRTKLGLRL DADARGAVNRYIEARITG" /EC_number="1.1.99.5" CDS complement(650043..651092) /locus_tag="Silicibacter_650" /function="COG: ATP:corrinoid adenosyltransferase" /gene="cobO" /transl_table=11 /note="identified by match to putative ortholog SPO0262 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="cob(I)alamin adenosyltransferase" /translation="MRPFLLLWGEAGQARWGRAQVLAGPQPVAAHPVRRFSRVGRSPG LRIDPPRVGRERSPCLPGLPTRGAPVALEDLSGHGRGGGCVWSKDDPGPTHSLFAQRL SPSGTNEISLRHGACLCQEMGKPWVRPARSKTVSDQTSQKSETGISEEEAARHASKMA KKKAARDRMMKTKDGEKGLIIVHTGPGKGKSSSGFGMIMRCIAHGMPSAVVQFIKGAW QTGERTLIEENFSDLCQFYAMGEGFTWETQDKARDIAAARAGWEKAKEMILDEKNTMV LLDEINIALRYEYLDLEEVLEFLVEHKPAMTHVVLTGRNAKEELIEIADLVTEMTQVK HPFRAGIKAQKGVEF" /EC_number="2.5.1.17" CDS 651413..652648 /locus_tag="Silicibacter_651" /function="COG: Putative GTPases (G3E family)" /translation="MPRPRMGSCPGASAPWCFASNPSPASRPSPCQVLRSRRHKPPAL RPKTPQTHLRCKAQRIDPKGRSHMTSLNKIPVTVITGFLGAGKTTLIRHLMQNPQGKR LAVVVNEFGTAGVDGDILKSCADDNCPAENIMELANGCICCTVADDFIPTIESLMALP EPPEHIVIETSGLALPKPLLKAFDWPAIRSRITVDGVIALADAEAVAKGQFAPDLDAV QAQREADESLDHETPLSEVFEDQIACADIVLLSKADLAGEAGVDKARAIIESEAPRKL PILPMTEGVIDPRVILGLEAAAEDDLDARPSHHDGHHDHEHDDFESIVVEMGEVSDPE DLQKRIIEMARSRNILRVKGYVAVEGKPMRMLVQAVGERLRAQYDQPWGAQERKTQLV VIAEHDNVDTAGIHADLGA" /product="CobW" /transl_table=11 /note="identified by match to putative ortholog SPO2862 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 652774..656019 /locus_tag="Silicibacter_652" /function="COG: Cobalamin biosynthesis protein CobN and related Mg-chelatases" /translation="MHVVFRESHGLGETDTPYDVGQTPGDLVVLSFSDSDLGAFAAGW HRAAGKLPSTRLANLVALKHPLSVDVYAEQTLEGAKGVLVRLIGGESYWSYGLATLQD LARRKGIALAVLPADGQEDPRLDELSTLPISTLRRLQALCDAGGAVAAQAALAQLALA SGLYASPVIGQKTVPDFGYYDPDDGALSALPKTHKPLVLVTFYRSYLTSADTAPIDEI LRGLRARGYAAFGAFAPSLKAPAAVQWLRAELSQRAPVAIINATAFSAQGRDGSASPL SLVGCPVFQVALSTARRKDWDLADRGLSPADLAMHVVLPEVDGRLFAGVVSFKAPTKR DPDLQYSRFTHRADPERISAALDRIEAHLRLARQTRAETRLALVLSTYPGRDYNLAHA VGLDALASTSEILSALARDGYDVAPEADLGARLSDHTLTWPLSDYIAALHKLPEALRD DLKAAWGAPEQDPAVRDRVCHFRALRAGKALIALQPERGDVQARDDDYHDLERTPRHG YVAFYLWLREQVDALVHVGAHGTLEWLPGKAVALSGACWPEVLAGDLPVIYPFIVNDP GEAAQAKRRIGALTLGHMPPPLAETTLPAGMGRLESLLDEYSTADGLDPARRDRLIAD IRAEAQGTGVEEDLGIPTEASAAEAITRIDRFVCDIKESQYGEGLHVFGRGAHGAEEM QGLLRALRGKLVAPGPSGSPYRGRSDVMPTGRNLFTTDPRAVPSRAAQAQGVKLAEEL LRRHLQDHGDWPSGLVVDLWGSATMRTAGEEFAMALHLAGLAPKWDEGSERVSGFEII PLALLGRPRIDVTLRVSGLFRDVFPGLAQMFEAAAAALGAREEDPGDNPYLQTTPRVF GPKPGLYGLGMTQHLDDYSDEARAAAGEAWLAASSHSIDAKGEITEARDALEKRLRNA DSFVHLQDLAETDVLVASDYAAHEAGFAAAMKRLGAKAPSLYHMDATRMDRPQARSLQ EEIARVTRARAADPHWATSMMNHGFRGAAEIAATLDHMAAFAHLAQVVPAHLFDLYFE ATLGREDLVAFLERENPAALQAMWDRFRALRDAGLWVTRRNFILASLEGAA" /product="CobN" /transl_table=11 /note="identified by match to putative ortholog SPO2863 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 656016..657176 /locus_tag="Silicibacter_653" /function="COG: Sulfite reductase, beta subunit (hemoprotein)" /translation="MSAPAPKVYGWCPGALRPMMSGDGLVVRIRAPMGRLSPEQAGAV AELSARYGNGLLDLSARANLQMRGIQENDHPNLIAALQDLGLVEADANAEARRNILLT PFWRSGDRSHQIAQRLAALLSDATTLDLPGKFGFAVDAGEAPVLQATAADIRIEGDGD RLMLRADGADVALEVTETEAAAQALALARWFLEQGGASEGRGRMHALISRRGAPDTHG ADVAKGAPLPAPGLTRNGALVALEFGQIHATTLAALAKHGALRLTPWRMLLVEDARDI TPLPDLILGATDPRLHVSVCTGAPGCLQALSQTRDLARDLAPHLQAGTHLHVSGCAKG CAHPRPADVTLTATGTDRFDLIRKGRASDAPLRSDLTARTLRAAPHILTKDT" /product="CobG" /transl_table=11 /note="identified by match to putative ortholog SPO2864 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 657178..657807 /locus_tag="Silicibacter_654" /function="COG: Precorrin isomerase" /gene="cobH" /transl_table=11 /note="identified by match to putative ortholog SPO2865 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="precorrin-8X methylmutase" /translation="MLHTYETDGAKIYAESFATIRAEANLARFTKDEEVVAVRMIHAA GMVGLEEHVRFSEGMAKTARAALADGAPILCDAYMVSEGITRPRLPADNEVICTLRDP KVPEMAREMGNTRSAAALELWRPKLDGAVVAIGNAPTALFHLLNMLKDPACPRPAAII GCPVGFVGARESKDALMEDLPVPSMIVEGRLGGSAITVAAVNALASWKE" /EC_number="5.4.1.2" CDS 657824..658555 /locus_tag="Silicibacter_655" /function="COG: Precorrin-2 methylase" /gene="cobI" /transl_table=11 /note="identified by match to putative ortholog SPO2866 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="precorrin-2 C20-methyltransferase" /translation="MNVPKAGKVICAGLGPGDPELMSVKSWRALQGATHVAYFRKAGR AGQARAIVEGLLPAGVTEYPMEYPVTTEIHFSDPEYNRQLAAFYDQWADTLAEIAATQ TVVVLCEGDPFLYGSFMHLHTRLEGRAEVEIIPGITGMSGCWTATGQPITWGDDVLTV AMATLSEDELTQRIRQTDALVVMKIGRNLPKLRRALEAAGRLQDAWLVERGTMPAQTV QKLTDVDGEVPYFSIVILHGEGRRP" /EC_number="2.1.1.130" CDS 658552..659373 /locus_tag="Silicibacter_656" /function="COG: Precorrin-3B methylase" /gene="cobJ" /transl_table=11 /note="identified by match to putative ortholog SPO2867 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="precorrin-3B C17-methyltransferase" /translation="MNDTPKGWVVIAGLGPGAESMVIPEVQDVLAEATDVVGYIPYVK RIPPRAGLTLHASDNRVEVDRATQALEMAAAGQRVVVVSSGDPGVFAMASAVFEALEE GAKTQPAWLNLEIRVLPGITAMLAAAAAIGAPLGHDFAAINLSDNLKPWELIERRLQL VGEAGLAMAFYNPRSKSRPHQFERALEVLRAACGDDTLISFARDVTKPGQEILTVPLR DARPEMADMRTVVIVGNRDTRRVGSYVYTPRFAPGHQPGHQPAYHTAANTATKDA" /EC_number="2.1.1.131" CDS complement(659370..660251) /locus_tag="Silicibacter_657" /function="COG: Precorrin-6x reductase" /gene="cobK" /transl_table=11 /note="identified by match to putative ortholog SPO2868 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="precorrin-6x reductase" /translation="MISALESADRLASESPSRPFSPSPIRVSHGREGPFVRGSNMRKL LLLGGTTEASRLAQHLAQSWVRDDPVAGRQAVFSYAGRTARPAQQPLPCRIGGFGGVP GLVAYLEREEITHVVDATHPFAAQMSLNATQACAEVGVPLVAFERPAWQPHPGDHWTH VRDMAGAVAALPEAGARVFLAIGKQHVAAFAVKPENHYLLRLVDAPEDALSLPKATVV VARGPFDAAGDEALMRSHRITHVVAKNAGGAGAEAKLSAARSLALPVIMIDRPEGPAR EVLGSVAEVMRWLDHGA" /EC_number="1.3.1.54" CDS 661320..661697 /locus_tag="Silicibacter_658" /gene="cobE" /translation="MERDPMIVAGFGFSNRASEASFAEAFAALDRRPDWVAVLRNKAK SPVFRAFALAEGLRVEPLEEYQISGAQTPTLSPRIHARFDTGSVAEACALVAAGKHAR LIQRRFVTTDGLATVALAETIAR" /product="precorrin methylase" /transl_table=11 /note="Hypothetical protein" CDS 661694..662488 /locus_tag="Silicibacter_659" /function="COG: Precorrin-4 methylase" /gene="cobM" /transl_table=11 /note="identified by match to putative ortholog SPO2871 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="precorrin-4 C11-methyltransferase" /translation="MTVHFIGAGPGAADLITLRGRDLIAACPVCLYAGSLVPEALLSH CPEGAKIINTAPLSLDEIMAEIASAHAQGHDIARLHSGDLSVWSAMGEQLRRLRDLDI PYDITPGVPAFAAGAAALGTELTLPGVAQSLVLTRTSGRASAMPEGETLENFAATGAT LAIHLSVHVLDDVVARLTPAYGADCPVAIVWRASWPDQKIVKATLGTVIEATDGARGR TSLILVGRALGAEDFAESCLYGAEYDRRYRPQSADSPWSEWSEGDD" /EC_number="2.1.1.133" CDS 662588..663904 /locus_tag="Silicibacter_660" /function="COG: Cobyrinic acid a,c-diamide synthase" /gene="cobB" /translation="MIPFPKGLMISAPSSGTGKTTVMLGLLRALKDDGLTVQPFKSGP DYIDPAFHLAAARRASFNLDTWAMDDTLLDAVTTQAQGAGICVGEGSMGLFDGVATRG QSGFGSSAETALRMGWPVVLVIDVGGQAQSAAATALGFKMYNPDLPFAGVILNRVASP RHDRLTRLGMERAGVKVLGSLPRRGDLALPERHLGLIQAVEHPDLEAAIAGYAAFLRE NVDIDAIRAVASSAAAPAPRALPRPPAQRIALARDAAFSFTYPHLLEGWRAAGAEILP FSPLNNEAPAKDADLVWLPGGYPELHGSTLAAADIWRKGMAEHAKTKPVHGECGGYMA LGEALIDKDGTRHQMAGLLGLVTSYEKRKFHLGYRRAALEAPMPGFDSGAFLRGHEFH YSTILDEPDAPLARVMDADGNPVPETGSVKGHVTGTFFHLITGEQP" /product="cobyrinic acid a,c-diamide synthase" /transl_table=11 /note="identified by match to putative ortholog SPO2872 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 663901..664638 /locus_tag="Silicibacter_661" /function="COG: Uroporphyrinogen-III methylase" /gene="cobA-2" /transl_table=11 /note="identified by match to putative ortholog SPO2873 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="uroporphyrin-III C-methyltransferase" /translation="MSGFVSFVSSGPGDPELLTLKAVKRLEAADAVLFDDLSSGPILS HARADADMVGVGKRAGRPSPKQDHVSQLLVEYAQSGAHVVRLKSGDSGVFGRLEEEMV ALRAAGIKYEIIPGVTAASAAAAAAGIPLTRRLTARRLQFITGHDVTGGLPEHMNLTA LADPEATTVVYMGKRTFATLLELLLEAGLPETTPALVALGVSTPAQELHRVTVAALPD LLEAIISPAPVLILYGPLADDDALVSQ" /EC_number="2.1.1.107" CDS 664635..665018 /locus_tag="Silicibacter_662" /function="COG: Predicted metal-binding protein" /translation="MTAPVISLCRTCQDADPALLPQLAAALREAHPRALLQSVDCMSG CARPQTLSVRQSGKTAYLFGEITAADLPDILRFLRLYEASADGTFTDARPIGELRFKA IARIPAPLPETTAASQTGSAASPEE" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2878 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 665463..666236 /locus_tag="Silicibacter_663" /function="COG: Predicted integral membrane protein" /translation="MCRPPPCMMLRMMCATRPASPATKQMFARILTSALFAGAAAGLI AALLQLFFVQPVLLHAELYESGALVHFGGETVSAHPELPGIFDEPMRNLLSILFTMLI YTGYALILVALMSVAERQGHEIRTGQGLLWGLAGFVALHFAPGFSLAPEVPGVAAADV GARQIWWAATVASAGVAMWLIAFGGNLVAYVVAALLLMAPHVIGAPEPETFAGPVPTE IGALFAARALGIGMAAWALLGVFCAYFWQTEAAHADANT" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2876 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 666342..666833 /locus_tag="Silicibacter_664" /translation="MSRSLALFAIGLVFGGGIGFLTAAGNGVTLDGHDHSDPAHHGGG SGVATHDHSALVNSPSGPEAPSVEIHVTPDAMSGWNLQVETKNFRFAPEHASGADQPG EGHAHVYVNGEKITRLYGSWLHLAALPEGETEVKVSLSSNSHGTIAVDGVPVEARVVV SAP" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO2877 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 666906..667670 /locus_tag="Silicibacter_665" /function="COG: Precorrin-2 methylase" /gene="cobF" /transl_table=11 /note="identified by match to putative ortholog SPO2874 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="precorrin-6A synthase" /translation="MLQLSLIGIGTGNPKHLTREAMEAICAQDLILIPNKGAGKDDLA GLRQAICADVLAGAASAPKIVEFDLPVRDPATPDYRQRVEDWHDAIAEVWQATLAAHL PKGGQAGFLVWGDPSLYDSTMRIAERLGQRMEMQMRVIPGITSVQALTAAHGVPLNRI GAPVQITTGRQLRDAGWPAGCDTLVIMLDGECSFQSVDRPEQVMIHWSAYAGMENEIN IAGRLSDVQDQILSVRARARRDHGWIMDIYMLERLR" /EC_number="2.1.1.152" CDS complement(667894..669084) /locus_tag="Silicibacter_666" /function="COG: Selenocysteine lyase" /gene="kynU" /transl_table=11 /note="identified by match to putative ortholog SPO2824 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="kynureninase" /translation="MTNLPKKYLFDIPEGMIYLDGNSLGPLPKGAAERAAKVLTQEWG TQLIKAWNTADWMALPQKVGDRIAGFIGAAPGSVATGDTLSIKVYQALAAALKMRPER RVILSDTGNFPTDLYMAQGLISTIGKDYELRTVAPEEVADAITDDVAVVMLTEVDYRS GRRHDMMEMTARAHQNGAVMIWDLAHSAGALPVDLTACNAEFAVGCTYKYFNGGPGAP AFIYARPDIVLEVDPALAGWLGHDAPFAMEPDYRPAMTTERLRVGTPSIVQLSILDTA LDVWDGVSMEEIRGASVALCETFIAEVEARCPELTLASPREAALRGSQVSFAFEDGYA VVQALIDRGVIGDFRAPNIMRFGFTPLYLDQADVVQAAEILEDVMKRESWKDPKYQVR SRVT" /EC_number="3.7.1.3" CDS complement(669086..669925) /locus_tag="Silicibacter_667" /translation="MSDSAYNPGQDGAKMGFADAMSYGDYLHLDALLDQQHCKSDAHD EMLFIIQHQTSELWMKLALHELQAAREALQQGQTAEMFKMLARVSRIFEQLNSAWDVL RTMTPADYTRFREALGPSSGFQSYQYRLIEYVLGNRNPNMLRPHEHVPEVHALLSAEL ARPSFYDEVNRYLFQTLDGHTENLPAPRLDAPHALDETIQERWLKVYGDIDTYWTLYE LAEKLVDLEDYFRRWRFNHVTTVERVIGFKRGTGGTSGVQYLRRMLSVELFPELWTLR GDL" /product="tryptophan 2,3-dioxygenase, putative" /transl_table=11 /note="identified by match to putative ortholog SPOA0409 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 670223..672697 /locus_tag="Silicibacter_668" /function="COG: Methylase of chemotaxis methyl-accepting proteins" /gene="cheR" /transl_table=11 /note="[KO:K03412 K00575], Hypothetical 104.1 kDa protein in hypE 3'region (ORF19)., MCP methyltransferase, CheR-type, CheR methyltransferase, SAM binding domain, , belas" /note="High confidence in function and specificity" /product="probable regulator protein containing CheR-and CheB-like domains" /translation="MAKAELPVIIGIAASAGGLEATTSLVKNLPSQTNASYVVAQHMS PTHKSLLWSLIGRETELPVIELTDEDLVPEPDTIYIAPPNYDVIVDNGKLALRDPSGH PGTPKPLADRLFKSLADECGERCVGIVLSGTGSDGSYGIRAIREAGGVTIAQEIGTAK YEGMPSSAVHTGCIDLTMSPDMIGQQLDSILANPRDFSELRGFTGNPSGLLDLYHILL ARTGVDFREYKETTINRRIARRMVAQGIDVYEDYVEFCRENATEVDALYKDMMISVTR FFRDHAQFNQLTKVIQGLVDDNRDRQIRVWVAGSATGEEAYSLAILFAEAMGGLKAIS KERIQIFATDIDTEALEVARRGIYPLSAANDVPRQYVETYMNLEGDALEVNKHLRSVV LFSRHNLIQDPPFINMDMISLRNLLIYFGASLQEKVLSRMAYALVPNGKLFLGSSETV GSMHGHFETYSLPDKIYSKRGLRQSVQATANFLPLTALHRGPLAQSRASTPPQTFDMF DALIRTLAPNGFIATQDHVIIRIIGDISSATELNESSALPRMSTKILKSELRAEAASL ITLCLRSKSTRSGRWHDVEGSDLIQLRMTCFPLLMDGEGEDHVLFSIEERESQPRTVA TEDMNIDDRMVYVRQIEDEIASTREALQQTIEELQTSNEELQSVNEEMQATNEELQAT NEELETSNEELQATNEELITVNEEMQINSTELQQLSIELAAVLEATPYPTLLVDPALQ IRHASAAAIDHFGLSELPPNGTHIGACTDGAGLAHLVSKVAECFRTRESSTLEVNDET WSKTLTFTPIQKGVTQETIGVTVTVL" /EC_number="2.7.3.-" CDS 673013..673729 /locus_tag="Silicibacter_669" /translation="MVTPVYEVSEYAGNMLTVEIREAAGGRDQTVAAVTLNSDELKNT LHFSGRRSISDVFHPDFADYLQNLLARAVEAPMVLTDPDVIQSFGGAVVARMRMLVNK AVDGGRHITVRFAYFIGAMSGLFRRDELSHHMPLPHRERAAVQALDSICTPLSNIASH LDRILENRNATESVRSRLRKIEDETVELKFYTELLRRYVDDCARERAGHEEDHALEYE NGEATTAIEEVERMMVETGT" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(674160..676508) /locus_tag="Silicibacter_670" /function="COG: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain" /translation="MSLRQALVFFALILALQIGVSFLGYRYLTLASEYRQRNLVHLNL VHESLDVLNENPVLGAQAAQQLHALLEGARAQARWCLDNLSDFERRAVLRLGAGPAFD ICQSALTATFQTDELLLATARGDRLLVEGIESPDDLNRELTAGVEELQHLSLSFRPYV DLIEEQLVRIVKTGTAVISLCLVLFFVFLARQMARAWHLHMEQARQLNRMSQRVTAAM EASKDGFAIFDEENRLVTCNDRYRELSHVHPDKVVPGMTLTEILADAVESGHYLLRGV SAKDYIQNYNQRIVNHGFCTETQLELAGDRHIVSRVNETDFGDKVVTRICITDLVRNE REQRRAAQALRETKDRLELQSLSDPLTHLPNRRHLDRELSRRLQTEPVALVRIDLDRF KKINDILGHEAGDYVLCHVADVLRAHTKAGDVPARVGGDEFVVLCRSGTTLEQAQTLA TRVLRAVLEPVVWGNKRCNFGASFGVAHGVPGEITASELLSNADAALYRAKASGRGAV EVFTSEMRAEVLEERALSDRLPYAIEAGEITPYYHTQHDALTWHLAGVEVLARWEHPD RGVLPPDRFLGIAKQLGLEAELDGCIFDRAVADMRSLRAEGILVRRVAFNVSAARIMQ PSFIETVRARIPDQRESYAFEILESISCEDEGEALIFCIDALKDLGFQIDVDDFGSGH ASINGVLNIEPDALKIDRNIIFPLGKSERAERMVASVVDLAHTLDVKIIAEGVDTIEK AKTLGAIGCDILQGFYFSKPRSFAELKKNLERLDLGDQVSNL" /product="Hypothetical signaling protein CC0091." /transl_table=11 /note="EAL, EAL domain, GGDEF: diguanylate cyclase (GGDEF) domain, , belas" /note="Conserved hypothetical protein" CDS 676706..677704 /locus_tag="Silicibacter_671" /function="COG: NADPH:quinone reductase and related Zn-dependent oxidoreductases" /translation="MKAIVHTARGTARDTLVLTETETPTPGPGEVLVAMRASGVNPSD VKLRSGAQGPMVAEQVLVHNDGAGVIEAVGDGVGPARIGRRVWLYNVNRSADGLGQGP LGTAAEFAIVPAHLAVDLPDAASFEAGACIGVPAMTAHRAVMWAGSVAGKTLLITGGA GAVGHSAIQIAKAKGARVIATVSSDAKAEIARAAGADEVLNYKSTPLVDQLIELVGAG GIDHVVDVDIAAHMEIYPQILKLNGSVGAYASASNLTPALPFYPLAFRNIQIQPVFVY SMSDSAKAEAIADINALLSAGQLTPRIDRVFALEEIVDAHEAVEAGTLVGNAILKI" /product="oxidoreductase, zinc-binding dehydrogenase family" /transl_table=11 /note="identified by match to putative ortholog SPO0616 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(677775..678170) /locus_tag="Silicibacter_672" /function="COG: Putative translation initiation inhibitor, yjgF family" /translation="MTHKTIHPEGWAPAKGYANGMLTHDGVLHIGGQIGWDENKEFVG DDFVSQMRQALKNIAAIVDAAGGKPSDVTRLTWFVTDKQEYLAHQAEVGAAYREVFGK HFPAMSMLIVAGLVEDRALVEIEATAHIS" /product="endoribonuclease L-PSP family protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0400 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(678167..678571) /locus_tag="Silicibacter_673" /function="COG: Acyl-CoA hydrolase" /translation="MYEMPQKVLFKHCDPAGIVFFPRYFEMMNDCVESWFTDVLGWPF EDMHQTAGVPTANIQTRFSAPSRHGDHLVLRLRVTRLGTSSLTYEMTAHCGEELRFST ETTLVHINAEGRSAPWPAPIRTKIENEMKGQI" /product="thioesterase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0786 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(678575..679261) /locus_tag="Silicibacter_674" /function="COG: ABC-type sugar transport systems, ATPase components" /translation="MSLLSVKSLTASYGVSQALFGVDLDINPGEVVALMGRNGMGKST TVKAICRMINAGGTLEFDGQNLHALPSHKAARLGLGLVPEGRRCFRDLTVAENLLATS RPGDWDMARVTQLFPRLGERHSQLSASLSGGEQQMLAIGRALMTNPRLLILDEATEGL APIIRQEIWAAINQLKADTDMAILVIDKTLAELAQVCDRAVVLERGKTVWSGAMAALT PDISERYVGV" /product="branched-chain amino acid ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0822 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(679258..680007) /locus_tag="Silicibacter_675" /function="COG: ABC-type sugar transport systems, ATPase components" /translation="MTETILATYGISKSFGALKASRDISIDLRPGEIHAIIGPNGAGK STLIAQICGSLTPDAGRVELMGQDVTGLSTDQRARAGLGRTFQISALAMEDTVLENAT LGAMGASGRPWRFWASALGDSALRDRAEAALERVGLAESKAKRCADLSHGQRRQLEVA VALTLAPKAFVMDEPMAGLGAEGSKNLTGFLDGLRQEAPILLVEHDMDAVFALADRIS VLVYGEVIATGSVDQIRTDPRVREAYLGESA" /product="branched-chain amino acid ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3706 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(680000..680983) /locus_tag="Silicibacter_676" /function="COG: ABC-type branched-chain amino acid transport system, permease component" /gene="hbaG" /translation="MTRETYFNAALMLGLIAVPAWALMSDEPFTITLATRAVILALAA AGLNIALGIGGLVSLGHAVFFGIGGYAMGILAHHAQSYTPLMEWPFLIEGTKFMPVIW LLAVVVSALAALVIGILSLRTTGAYFIMITLAFGQMFYYFAISWTTYGGEDGMSIYVR NDFPGLNTLAPIQFYGLCLAILVVVLIFTARLRRSPFGLALNAARQVPARVEAVGMDP MRLKLVAFVISGVITGLAGALFADLNRFVSPTMFSWQFSGEIMILVILGGVGRLFGPV AGAVTFVALEHFLGGITEFWHIFLGLILLAVVLFARGGITGLVAGKEATHD" /product="High-affinity branched-chain amino acid transport system permease protein livM" /transl_table=11 /note=", High-affinity branched-chain amino acid transport system permease protein livM (LIV-I protein M)., Bacterial inner-membrane translocator, Branched-chain amino acid transport system / permease component" /note="High confidence in function and specificity" CDS complement(680980..681900) /locus_tag="Silicibacter_677" /function="COG: Branched-chain amino acid ABC-type transport system, permease components" /gene="hbaF" /translation="MSTILIIEQVLNGLQSGVMLFLMAAGLTLIFGVMGLINLAHGSL YMVGAFAAAAVAGVTGSFVLALIAALAAAALAGAVIEVAVIRRLYDSDHLDQVLATFA LILIFSEGTRWVFGSFPLFLDIPDALSGPVTLPGGIQYPLYRLALIGVGLLVAFGLWL LIERTRIGIQIRAGENDREMIAALGVDISKLYTLVFALGAALAGLAGALVGAIQSVQV GMGEPVLILAFVVIVIGGIGSIKGAFIGALLVGLTDTLVGIFLPEVLKLFMDAAPATS AGSSIASMSIYILMSLVLVWRPSGLFGARA" /product="Galactoside transport system permease protein mglC homolog." /transl_table=11 /note=", Bacterial inner-membrane translocator, Branched-chain amino acid transport system / permease component" /note="Conserved hypothetical protein" CDS complement(681958..683088) /locus_tag="Silicibacter_678" /function="COG: ABC-type branched-chain amino acid transport systems, periplasmic component" /gene="hbaE" /translation="MKKLMLATAAAALAAGGAMAEVKVGMITTLSGGGASLGIDTRDG FMLAMEAAGRDDVEVVIEDDQRKPDIAVQLADKMIQSEKVDVMTGIVWSNLAMAVVPA TTAQGLFYLSTNAAPAQLAGKGCNANYFSVAYQNDNLHEGAGAYATQAGFKNTFILAP NYPAGIDSLTGFKRFYEGDLAGEVYTKLGQTDYAAEIAQIRASGADSVFFFLPGGMGI SFLKQYSDSGVDLPVVGPAFSFDQGILQAVGEAALGVKNSSTWSKDLDNEANAAFVAA FQQKYDRLPSIYAAQGYDTANLLLSAIDKADVNDDAAFAAALKEADFASVRGEFSFAA NNHPIQNVYVREVIKEGDVYTNKIVGTALEDHANAYVDECKM" /product="Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor" /transl_table=11 /note=", Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor (LIVAT-BP) (Leu/Ile/Val/Thr/Ala-binding protein)., Extracellular ligand-binding receptor" /note="High confidence in function and specificity" CDS complement(683127..684743) /locus_tag="Silicibacter_679" /function="COG: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases" /gene="badA-2" /transl_table=11 /note="identified by match to putative ortholog SPOA0401 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="benzoate-coenzyme A ligase" /translation="MMTLGASAHTDTFTRDALPPADQWPDFMLEGFEYPEHLNAGVEL TDAMVERGFGDRTALIGNGRQRTYKELADWTNRLAHALVQDLGVKPGNRILIRSANNP AMVACWLAATKAGAVVVNTMPMLRAAELKKYVEKAQIQFALCDTRLMEEMEACAAQCD VLERVVGFDGTSNHDAELDRLALEKPVQFEAVETGRDDVALLGFTSGSTGEPKATMHF HRDLLIIADGYARDVLNVVPEDIFVGSPPLAFTFGLGGLAIFPLRFGATATLLEQATP PNMIEIIEKYRATVCFTAPTAYRVMLSAMEEGADLSSLRAAVSAGETLPKPVYDDWMA KTGKPMLDGIGATEMLHIFISNRFDDHRPACTGKPVRGYEAKVVDDEGNTVPDGEVGR LAVRGPTGCRYLNDDRQAGYVADGWNITGDSFIRDADGYFHFAARNDDMIVSAGYNIA GPEVEAALLAHAAVAECAVIGAPDEARGHIVQAHIVLNADFAPSETLIKDLQSHVKAT IAPYKYPRSIIFAEELPKTQTGKIQRFRLR" /EC_number="6.2.1.25" CDS complement(684740..685894) /locus_tag="Silicibacter_680" /function="COG: Acyl-CoA dehydrogenases" /translation="MADQSFLNWPFFDEEHRAWAAKVEAVAEGLEVDHSDTDAACRRL VADLGAAGVLQPTAAAGASKSLDVRKLCLAREILARHDGLADFAFAMQGLGTGAISLF GTDAQKAEWLPKTRSGAAIAAFALTEPQSGSDVANSTMTAVRDGDDYVLNGEKTWISN GGIADVYTLFARTGEAPGAKGLSAFIVTPDLDGFEVVERLETIAPHPLATLRFSDVRI PASAMIGAPGQGFRIAMSVLDVFRSTVAAAALGFARRALDEALWRVTERHVQGAPLFD LQMVQGHIADMALDVDAAALLVYRAAWTKDSGAARVTREAAMAKLFSTEAAQVVIDKA VQLFGGEGVRSGAMVEKLYREIRALRIYEGASDVQRVVIARQAMMALEGK" /product="acyl-CoA dehydrogenase family protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0403 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(685960..686763) /locus_tag="Silicibacter_681" /function="COG: Enoyl-CoA hydratase/carnithine racemase" /translation="MSLDETTHFNCTIEGGIARISLNRPERKNPLTFESYAELRDWFR ALPYSDEVHAVVIVPNGGNFSSGGDVHDIIGPLTRMNMKELLAFTRMTGDLVKAMLNC SKPVISAVDGICAGAGAIIAMASDLRIATPEAKVAFLFNRVGLAGCDMGACAMLPRII GQGRAAELLYMGRSLGAEEGERWGFFNRLASAEALEAEAMKMAERIVEGPTFANGMTK TMLAQEWSMSLEQAIEAEAQAQAICMQGNDFRRAYEAFVAKERPVFEGD" /product="enoyl-CoA hydratase/isomerase family protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0404 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(686770..687255) /locus_tag="Silicibacter_682" /function="COG: Transcriptional regulators" /translation="MSGTAAQADLGDTASKARLRLWLKLLKTSGSIESELRRRLRDRH NTTLPRFDVMSALSRNPEGLKMSQLSQFLRVSNGNVTGIVDRLTEDGLALRVAVPGDR RAQVARLTPAGEAEFDRLAAEHEAWIGEMMAGLGADEITEMSALLDQIQPVAAPQEDK G" /product="transcriptional regulator, MarR family" /transl_table=11 /note="identified by match to putative ortholog SPOA0405 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(687252..688001) /locus_tag="Silicibacter_683" /function="COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /translation="MSQDPRQEHVLITGGGTGVGAACAQAFAAQGAKVTLMGRTEKTL AEQGLPYEVCDVTDAPSVTSAVARAAAARGPVTVAIANAGAAESVPFAKMQPELLTEM MAVNLGGVVNLWQAVLPGMKEAGRGRMIAVASTAGLKGYAYVSAYCAAKHAVVGLTRS LAKELARTGVTVNAICPGFVETPMLQRSIDNIRAKTGMTSEEAAGALKADNPQGRFVQ PEEVADAALWLASDTAGSVNGHALALTGGEI" /product="D-beta-hydroxybutyrate dehydrogenase, putative" /transl_table=11 /note="identified by match to putative ortholog SPOA0406 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(687998..690238) /locus_tag="Silicibacter_684" /function="COG: NADH:flavin oxidoreductases, Old Yellow Enzyme family" /gene="abmA" /transl_table=11 /note=", [EC:1.14.13.40], NADH:flavin oxidoreductase/NADH oxidase, NADH:flavin oxidoreductase / NADH oxidase family" /note="High confidence in function and specificity" /product="probable bifunctional hydroxylase/oxidoreductase" /translation="MKLRDPSHEVTVIERNRADDTFGWGVVLSDETLDNLAANDAKSA ESIRSHFAYWDDVALLFKGTRQVSSGHGFCGIGRKKLLILLQERARELGVKMQFETEV QSAEDYRKDYDLVVASDGLNSRTRSLYADTFKPDVDTRLCNFVWLGTHQTFKDAFTFI FEETEHGWVWAHAYQFDDDTATFIVECTQETFDAFGFGSMSQQESIKTCEEIFKDHLG GHALMTNANHIRGSAWIRFPRVLCEKWSHENVVLMGDAAATAHFSIGSGSKLALESAI ALADLLHEKPDLQSAFDEYEDQRRLEVLRLQSAARNSMEWFERVERYLDLDPVQLNYS MLTRSQRISHENLRERDKDWLESAERWFMDQAGAPKDAPLRAPMFAPFRLREMDLKSR IVVSPMAQYKAKDGSPTDWHLVHYGERAKGGAGLVYTEMTCVSPEGRITPGCPGLYAP EHEAAWSRITDFVHAETDAKICCQIGHSGRKGSTQLGWDEMDAPLPEGNWDIVSASAI PWSGQNATPREITRAEMDEVRDQFVRAAQMADRAGFDMIELHAAHGYLISSFLSPVSN QRGDDYGGSLENRLRYPLEVFAAMRAVWPEGKPMSVRISANDWVGEDGVTPDEAVQIA RAFWEAGADLIDVSAGQTTTEAKPVYGRMFQTPFSDQIRNEAGICTMAVGNIFEADHA NSILMAGRADLVAVGRPHLSDPYWTLHEGSKIGDRAAPDWPLPYLAGRDQSWRLADKE AETLRA" /EC_number="1.14.13.40" CDS complement(690600..691541) /locus_tag="Silicibacter_685" /function="COG: Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase" /translation="MSRSEQVFHAGELILQNRAGVAPSYRERVAHAIRPQMPQQHRDF FESLPVLFLGLLDARGRVWATPAVGEVGFLRSRDPGHLAVGARPVLGETLWLDVRAGA KVGAVGMEMASRRRNRMNGTITAVNGEGFEIAVDLSFGNCPQYIQTRDLVWPANPPAP EAVALPDWESQSRALVAQADTFFIASRAAEMSARPIDGVDASHRGGRPGFLTINDDSS LSFPDFAGNRFFNTLGNIEADGRVGLFIPDFKSGAGIFVTGLATVDWRPDRVSHFKGA ERIVDVQPEEIWYCTHALPGPAPLVSTWPLLAETGVW" /product="hypothetical protein" /transl_table=11 /note=", FMN-binding split barrel" /note="Hypothetical protein" CDS complement(691543..692205) /locus_tag="Silicibacter_686" /function="COG: Glutathione S-transferase" /gene="gst3" /transl_table=11 /note=", [EC:2.5.1.18] , Glutathione S-transferase, C-terminal-like, Glutathione S-transferase, N-terminal domain, maiA: maleylacetoacetate isomerase" /note="High confidence in function and specificity" /product="probable glutathione S-transferase" /translation="MNAEFASSSAPIKLYRHPLSGHCHRVEMMLSILDLPYELVDLDL LQGAHKAPAFLDLNPFGQVPVLDDNGTIVSDSNAILVYLVEAYGKETGWLPRAPGVAA AVQRWLSLTVSHLATGPARARWRTLTGASDTPETETARAISHAFLEQMEGLISGQHYL AGEAPTIADVSAYAYIAHAPEGGVSLAAYPKVRAWIDRVEALQGFVPMQASPLPELAR GA" /EC_number="2.5.1.18" CDS complement(692259..692732) /locus_tag="Silicibacter_687" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MTSTARPPLPPFTRESAIEKIRLAEDGWNSRDAAKVSLAYTPDS RWRNRAEFPVGRTEIEAFLTRKWARELEYRLIKELWAFDGNRIAVRYAYEYRDDSGHW FRAYGNENWQFDENGLMEERHASINEHPISEADRKFHWPLGRRPDDHPGLSDLGL" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0422 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 692861..693793 /locus_tag="Silicibacter_688" /function="COG: Transcriptional regulator" /gene="gstR" /translation="MDRIQSMQVFVAVAEEEGFAAGARRMGLSAPSATRAINGLETQL GARLFTRTTRRLHLTDVGQRYLEDVRHILTSLQAADDTARGAASAPVGLLRLTCPNEF GRIYILPILLDYLDHYPDMRAELVLLDRVVNIVEEGFDVALRIGHLPSSTLSAVKVGA VRRVLCAAPAYLERYGTPETPADLSAHRIVAVNVISSATEWRFGAQQEIAVRIAPQLC VSTVAAGRDAAREGWGLCRMLSYQAGRDVAEGHLTCLLEDYEPESMPIHLVHTEGRRA PAKVRSFIDFARDRLRADPVLQALSSSKGCGLSA" /product="Putative HTH-type transcriptional regulator yafC." /transl_table=11 /note=", LysR, substrate-binding, LysR substrate binding domain" /note="Conserved hypothetical protein" CDS complement(693790..694638) /locus_tag="Silicibacter_689" /function="COG: Nicotinate-nucleotide pyrophosphorylase" /gene="nadC" /transl_table=11 /note="identified by match to putative ortholog SPO3245 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="nicotinate-nucleotide pyrophosphorylase" /translation="MSFATLPDLILEPLVKSALMEDLGSYGDVTTRAVIPDDVTYSAR LRAREEAVVSGMQVAALAFRLVDATLEVKTRVADGAVCQPGDVLMEIEGKAASILMGE RVALNFAGRLTGIATLTAAMVAETRGTQARITCTRKTTPGLRMVEKLAVLHGGGFNHR YSLSDAILIKDNHIAAAGGIRAVLDATKAHASHMMAVEIEVDTLDQLREVLEVGGASV VLLDNMTPAELREAVEINAGRLALEASGNVKRDTVAEIAATGVDFISSGALTHSARTV DLGLDF" /EC_number="2.4.2.19" CDS complement(694635..696230) /locus_tag="Silicibacter_690" /function="COG: Aspartate oxidase" /translation="MESSQDIQSNRIVIIGAGLGALYAALTLAPRPVVMISPDPLGQG ASSAWAQGGVAAAMDVSDSPAAHARDTQRAGAGTVDAQVADLVTREAREHILDLTTLG APFDRTADGSYVMSREAAHSYARVVRVKGDQAGAEIMRALIERLRETPSIQVIEGAMA EGLELSDGAVTGVRLASSAPSGSAPLVLRGQAVLMAGGGSAGLYAITTNPPRIRGQAL GMAARAGAEIADAEFMQFHPTAMDVGEDPAPLATEALRGEGAILVNADGARFMLDEHP DAELAPRDVVARAIFAQSIAGKRPLLDTRAALGEAITTVFPAVSAACARNGIDPTQDP IPVAAAAHYHMGGIATDLDGKSSLPGLWACGECASTGLHGANRLASNGLLEALVYARR AAQDIARTLGPLKEATSVRLEFAPGGATTDPAHVAALRRAMTQNVGVVRDAAGLRAAL SEIAALAATQPDCESFQNICTAATMIAAAALLREESRGAHERSDFPETLPALAHRSRL TWEAAKALRDSLCDASASDPETP" /product="L-aspartate oxidase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3244 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(696238..697416) /locus_tag="Silicibacter_691" /function="COG: Quinolinate synthase" /gene="nadA" /translation="MLARKMRGVTGRKRVCANPSDFLVPLRYVCGPRPYEGENPAMSL DIPVLRSELSQHYDLTPNPELAEAMSDVYQRMSRVVSPVDWVLYAPYVKAINELKAKR NAVILGHNYMTPEIFHGISDFVGDSLQLAIKATEVEADVIVQCGVHFMAETSKILSPS KTVLMPDMDAGCSLAESITAEGVEEMRRRYPGAPVVSYVNTTAEVKAASDICCTSSNA AQIVGAMESDTVIMTPDQYLAQNVARDVPHKNVVWWEGSCIVHEQYTAKDLRDFREWN PGTRLIAHPECPPDVVAEADFSGSTSGILKYVTDEKPEKALLITECSMASNIADALPE VEFVGPCNMCPYMKKITLEKVLWSLHSMEGQVEVEPEMAAKARHAVQAMIDLSRKLGI " /product="Quinolinate synthetase A." /transl_table=11 /note=", Quinolinate synthetase A, Quinolinate synthetase A protein, nadA: quinolinate synthetase complex, A subunit" /note="Conserved hypothetical protein" CDS 697606..698805 /locus_tag="Silicibacter_692" /function="COG: ABC-type uncharacterized transport system, periplasmic component" /gene="ynjB" /translation="MKRILSLALALAPLSAWATPDPADWPAVVEDAKGQTVHWHAWGG STATNDFIAWVGERLEDDYDITLNHVKLESTADAVTRVLTEKSAGQDDDGAVDLIWIN GANFAAMKDADLLFGPFAEALPNWQLADTENKTLQHDFTVPTEGYESPWAMAQVVFMH DTADLPERLGSMEALLDWAREHPGRFTYPQPPDFLGTTFLKQALVDLSDNADALSKPV NEDNYQEVTAPLWAFLEELTPLLWREGRAYPATGPRQLQLMNDDEIDLAISFSPGEAS TAIANYQLPESVRTFVLDKGTIGNASFVAIPYNSGSKAASMVVANFLMSPEAQLRAQD PDVLGYGTVLDLNALSVQDRAAFRTLDLGIATLTPEELGPVQPEPHPSWMTRISEDWV ARYGVGN" /product="Protein ynjB." /transl_table=11 /note="Conserved hypothetical protein" CDS 698823..700520 /locus_tag="Silicibacter_693" /function="COG: ABC-type uncharacterized transport system, permease component" /translation="MRLPLALPPVLPVLTILVLIGPVLAGLWGTISAAFGHLPVAGLY GPSLQPFEALWNWPGLGPAVRLSLVTGVLATLLSLLITLLLLAGWSGTRPFRAVLRLL SPLLSVPHAAAAFGLLFLIQPSGWIARALSPWLTGWQRPPDVLLVQDPWGLAMTLGLV VKEVPFLLLISLAALGQIDSQGRLRVAMALGYGRVAAWIFAVGPALYQRIRLPIYVVL AYSMSVVDVAVILGPNTPPPLSVQIVRWMAEPDLTLRTLASAGALVQLALVIGALLLW RGAERGIAALGTGLIYRGWRFSRDGLWRALGLAAAATSVGLVLAGLLGLVVWSFAARW SFPDLLPDGMSLRSWSRNSPAALETLATTFAIAGAATLAALVLTLGCLETEERRNLRL TRKGLWLLYLPLLVPQTAFLPGMQTLLLGFGIDRTLWAVVLAHLVFVLPYLRLSLEGP YKAWDPRLGAVGAAMGASRNRIFLQLRLPMLLAPILTAVAVGMAVSVGQYLPTLLVGG GRIQTLTTEAVALAAGGDRRAIGLYGLVQTAAALLPFVLALALPLFVWRNRRGLHHG" /product="Thiamine transport system permease protein thiP." /transl_table=11 /note="Conserved hypothetical protein" CDS 700513..701148 /locus_tag="Silicibacter_694" /function="COG: ABC-type spermidine/putrescine transport systems, ATPase components" /gene="ynjD" /transl_table=11 /note=", Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase)., ABC transporter related, ABC transporter, thiQ: thiamine ABC transporter, ATP-binding protein" /note="High confidence in function and specificity" /product="Sulfate/thiosulfate import ATP-binding protein cysA" /translation="MAEGLSLRALRILRGDHPLLELDLTVPPATILSVMGPSGVGKST LLAAITGQMSTDFSLEGGIFLNGRDLCPLPPQARRVGILFQDHLLFPHLSVGANLAFG LAPHIRGRTRRARIKDALAEIGLEGFHDRDPETLSGGQKARVALMRMLLSEPDLLLLD EPFSRLDATLRSQMRDLVYTFARDRALPVLMVTHDAADAEAAGGPIVQLEP" /EC_number="3.6.3.25" CDS complement(701856..703523) /locus_tag="Silicibacter_695" /function="COG: ATPase components of various ABC-type transport systems, contain duplicated ATPase" /translation="MASYQYVYHMQGVSKTYPGGKKCFENIHLSFLPGVKIGVVGVNG AGKSTLMKIMAGLDKDFTGEAWAAEGAKVGYLPQEPQLDESLSVRENVMLGVKEKKDK VDRFNQIAVEMAENYTDELMEEMTALQDAIDSENLWDLDSQVDVSMEALRCPPDDAKI ADLSGGEKRRVALCKLLLEAPDMLLLDEPTNHLDAETIAWLQQHLIDYKGTILCVTHD RYFLDDITGWILELDRGRGIPYEGNYSSWLEQKAKRLEQEAREDKAKQKTLERELEWM RQGQKARQAKSKARIAAYNEMANTSEREKVGRAQIVIPNGPRLGGKVIEVENLGKHYG DKQLIEDLSFSLPPGGIVGVIGPNGAGKSTLFKMLTGQEQPDQGSVTYGDTVKLSYVD QSRDDLNDNDTVWEAISGGAEIIELGDAQVNSRAYCSSFNFKGGDQQKKLNLLSGGER NRVHMARLLKEGGNVLLLDEPTNDLDVETLRALEDALVDFAGCAVVISHDRFFLDRIC THILAFEGDAHVEWFEGNFEDYEEDKKRRLGPDALEPKRLKHKKFVR" /product="ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0446 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 703599..703994 /locus_tag="Silicibacter_696" /translation="MRRLWGRLCLQHDRSPTSAKNCGRGVDHILTTFIFNLTIKQSAA ARVRAAPLRKRQQETIMIVAALILGVIGGSVSAVSAGVFFGASLLLCSAVYVGSGLLV SVMTLFVGVILQSRRQSDTPSEERAVAHA" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 704663..705265 /locus_tag="Silicibacter_697" /function="COG: Nicotinic acid mononucleotide adenylyltransferase" /gene="nadD" /transl_table=11 /note="identified by match to putative ortholog SPO0449 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="nicotinate (nicotinamide) nucleotide adenylyltransferase" /translation="MRHAYPYLAPGMTVGLLGGSFDPPHEGHVQISRAALKRFDLDQL WWLVTPGNPLKENPPASMTRRIKAAREIMDHPRVRISDIEARLNTRYTAQTLRELRKL YPQVRFVWLMGADNLAHFHRWKNWRGIMESVPVGVLARPGDRISARLSRAARIYSQHR IPAGQSHLLARASSPAWCFLNVPMTKASSTEIRKRGAWTG" /EC_number="2.7.7.18" CDS 705363..706847 /locus_tag="Silicibacter_698" /function="COG: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)" /gene="dacB" /transl_table=11 /note="identified by match to putative ortholog SPO0451 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase" /translation="MISRRHFLSTALAGLAAAPALANAPGYTPRPKARGLSPYTPGAD GLDAILRGAGLSGQSTCVVANARTGQVLESVEGDALLPPASVAKVLTALYALDSLGAG YRFRTRLVATGPLKNGIIQGDLVLVGGADPTLDTDGLANLAGQMKTAGVRGVTGRLLI WEDMLPYIRSIDPDQPDHIGYSPSVSGIALNFNRVHFEWKRAGNNWAITMDARTQKYR PDVYTSKMAVARRDLPVYSYENKAGIDHWTVASGALGNGGARWLPVRNPALYAGDVFQ TLARANGIALPSPKTTATLPGGTVVAQIQSAPLPDLLRAMLKYSNNLMAEMIGMTASL QRGARPSSLKSSGQRMSDWARSALGMQHCKMVDHSGLGEESRLSANDMVRALLASRRT GALKPLLKPYYFNDAKGRPIKTHPVKIAAKTGTLNFVSGLGGFINTPDGGELVFAIFS ADQRARAKISRAERERPRGGRSWNTRAKKLQQNLLDRWGQVYGS" /EC_number="3.4.16.4" CDS complement(706993..707415) /locus_tag="Silicibacter_699" /translation="MTEETIQLLTPQDCLVAVMVAVSASDEDIRTAELVKIQNAINML PIFAEYDADRIAAVSRTVFDLFEQEDGLDALFGLVREILPERLNETCYALACDVAAAD GKLNEGELRLLEEIRYEINVDRLHAAAIERGARARHMV" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0452 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 707634..709277 /locus_tag="Silicibacter_700" /function="COG: Lysyl-tRNA synthetase (class I)" /gene="lysS" /transl_table=11 /note="identified by match to putative ortholog SPO0455 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="lysyl-tRNA synthetase" /translation="MSVLREEALKSKAWPFEEARRILKRYAKGAPEKGYVLFETGYGP SGLPHIGTFGEVARTTMIKTAFEVISDIPTKLICFSDDLDGMRKIPGNVPNAESLTEH LQKPLTSVPDPFGTHESFGHHNNAMLRRFLDTFGFEYEFYSATEFYGSGQFDEVLKRA VDKYDDIMAIMLKSLREERRQTYSIFLPIHPETGRVLYVPMKKVCAETYTITFDDEDG REWTLPVTGGNVKLQWKPDFGARWAALGVDFEMYGKDHSTNTPIYDGICRVLGQRAPE HFTYELFLDENGQKISKTSGNGVSIDEWLTYASTESLAYFMYQKPKTAKRMHFDVIPK AVDEYHQQLRAYHGQDLKAQLSNPVWHIHGGNVPQSDMVVPFSMLLNIASVSNAEDKE TLWGFINKYAPDATAETHPGMDQAAGHAVRYFNDFVKPAKTYRLPTDQERAALTDLAD ALRSSEAALAAIAKKNELVGNDDPLPEANFADEEFLQSVVFAIGKIHGFEPLRAWFSA IYEVLLGASQGPRFGGFIALYGVEDTITLIESALAGDLV" /EC_number="6.1.1.6" CDS 709529..709942 /locus_tag="Silicibacter_701" /translation="MRMMVTFGLVAALAVATLGTPAKAQKEPITGVIGAQIEAFQAND MGTAFGFASPNIRALFGTPERFATMVEQGYPMVWRPADVRYLELREVAGNLWQRVMVT DADGDIHMLDYQMIETEAGWKINAVQLIKAPGANV" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0457 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 710064..712349 /locus_tag="Silicibacter_702" /translation="MNKAITDGLQLMPPAFSQGLGVWSSGDGTPGSDTYDGAANAALV AGDADFGGCLELQKTDSTQRLRYMGETPILPGCYLRVTARVKAMSGALPTVRIAGWAG AANNSHVSGVIESGPGTTLSAYGEVVEVQAIVGTGSRSGVDMPWGLDAAYGHLGLNLT GANGGVIRVDDFVIEDITSVFLRDMLSVVDVTDFGAVGDGAADCHAAFEAADDAANGR RILVPDGEFRINSTLSLNHDVIFEGTLSMPDNAMLLLTKSYDYPTYAAAFGDEELAFK KAFQALLNSVDHESLDLGGRSIALSGPIDMQAAVPNRTSYATRRYIRNGQFAAQAGAA WDHNVITAQATYSASDKKTLTNVANISAIPVGALVEGAGVGREVYVTAKNLGASRLTL SQPLYDAEGTQNFTFTAFKYMLDFSGFSSLKKFGISGVEFQCNGVASALRLSPAGTVF ALHDCFFTRPSARGITSIGSGCQGMLVDNCQFLSDEDAADVADRETIALNVNSNDVKL RHNRATRFLHWAVMAGSNHTVTGNHFFQGDSVAGGIRTAGIVVTDTYASHTISENYID NCFIEWTNEYDANPDFNGGFSFAAMSITDNVFLSGDVASWFSYIVIKPYGSGHFLNGV SVTGNKFRSINGTIDRAERVDTSFADLDFSRAKDVFFDANSFHNVTTQSRNPLRVEFD QNTAASTWTIATGGALPFDGHSRAVDAVIVEGSLRNSGGSVVYPGHYVRTQEGGSNNK IDLVWEQAVRGTVRTLIRIDR" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0459 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(712346..712999) /locus_tag="Silicibacter_703" /function="COG: Putative heme iron utilization protein" /translation="MALFRAGTAWPDAGVVAEVLDSRPTASPAGFRSARPDTFTDRKR ASMPQDTPPSEKPTSPIRPTDDEARTLAQSLIAEADFAALATLSDEGHPVQSRVAFAL DASGGPISLVSTLAQHAQAMAVRPQVSLLVGEPGEKGDPLTHPRLTLNGTAEILPNGC PAHEEMATHYLRRHPKAKLYIGFADFHFVRFQIREAFLNGGFGKAYQLTPADLGLVP" /product="pyridoxamine 5'-phosphate oxidase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0465 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(712939..713601) /locus_tag="Silicibacter_704" /translation="MRLPLVLSLVYALSTLPALAGAWLEAEGRGFTSSALRTRGSGQE VSGYIAYGVSQRLTFGLDLNQSTDAQNQSAHALVFTRLPLRQSETGWQLAFEMAAGFG RVETQWSGMKRLGLSAGRGLSWPTRGAWVNFDLIREWREEGLAKAWKLDGAFGFERRS GPAVIFRGEVFQPDAGARIWKVLPGLRWRLSPKRELLTGLEWRSFGQERLGLTLELWQ RF" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 713705..714025 /locus_tag="Silicibacter_705" /translation="MPTIQKSDDRQTVITTFEVTPGTCQDLIDALEAAYAEFISFQPG FIAAGLHVNDAQTRIANYSQWHRREDFMAMLRSQEMRKRNRELNALCRSFEPVMYDVV TTFG" /product="antibiotic biosynthesis monooxygenase domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO0462 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(714044..714442) /locus_tag="Silicibacter_706" /translation="MFRLSLTLPALAVLAACATPQERCIREGASEQTQLQRQITESEG NIARGYAIHRQTVPETVFHSCRRVKDGKVVGYYPCPETYYRTIETPVSIDMDDERRKL RRLKDALPAAQKRAAEAAAQCRVLYPEKSI" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(714596..715525) /locus_tag="Silicibacter_707" /function="COG: Uncharacterized conserved protein related to MYG1 family" /gene="Myg1" /translation="MTITHLVTHSGGFHADELLSTVILSRLYPHAELVRTRDKAWITP AEGRIIYDVGGQFDAAARIFDHHQRPNPLRPDGQPYSSFGLIWAAFGQDYLRALEVPE KDLDRVHAAFDADFVRPVDLLDNGAVDSAEAGPLFAGLTLPVLLESLKPVFDDRRDGA DDAAFVDALAIARAFVEARLRHKAAKLRATDVVLRAIEDAGERRVLELPMGMPFRGAV EQAGADHLLFVIHPRDSDWALTTIRTGDDTFETRADLPLAWAGLTDAAFEAASGVPGA AFCHNGRFLAIARSREAVLALAELAVAEVCATA" /product="MYG1 protein (Gamm1 protein)." /transl_table=11 /note=", Metal-dependent protein hydrolase, Uncharacterised protein family (UPF0160)" /note="Conserved hypothetical protein" CDS 716302..717102 /locus_tag="Silicibacter_709" /function="COG: ABC-type spermidine/putrescine transport systems, ATPase components" /translation="MLTKLTTICFRNLRMARDTPYPNEIKRDRDPQMSTDARPILTLQ DVHLSLNGNTGPVRILEEISLEVQSGETLALVGPSGSGKSSLLMVMGGLEQATGGQVR AMGEDLTRLDEDALARFRRAHMGVVFQSFHLIPTMTALENVATPLELAGARDAFDRAR DELEAVGLGHRCDHMPAQMSGGEQQRVALARAVVTRPEILLADEPTGNLDQANGAQVM DLLFDLRDRHGSTLVMVTHAPELAERCDRTIRLRDGRILTDAQREAAE" /product="ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0434 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(715668..716345) /locus_tag="Silicibacter_708" /function="COG: Lysophospholipase L1 and related esterases" /translation="MRKFLKQIVVSLVSIPLLLGVAQAEPVRITAFGDSLVQGYGLPQ GEGLVAQLRDWFAVEGFDVALTNAGVSGDTTAGGAARIDWTLAETPDAMIVLLGGNDL LRGLPPEDTRANLSRIIEAARGAGAEVLLIGMQAPGNYGADYKAAFDSIYPDLTATHD LVLHPFAFAGMAAEAGEDPAQMGAYMQADGIHPNARGVALNIKAMEPALHALMARLSQ PEDSANN" /product="acyl-CoA thioesterase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0435 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 717099..719627 /locus_tag="Silicibacter_710" /function="COG: Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component" /translation="MSQKSSFRLAWRFALRELRGGLRGFRLFLACLALGVGVIAAIGS IRASIEAGLSREGASLLGGDAELTFTYRFANPDEIAWMDEIARDRSEVVEFRSMAVVG DERALTQVKSVDAAYPLRGDFRLMSGQPLHEALAAADGRPGAVMERVLADRLGLSEGS VFRLGTQEFRLSGLLEWEPDAAGSGFSIGPRTLVRTEALAQSGLLAPGTLYSTKYRLT LPPDADLAALEQDARARFEESGMRWRDARNGAPGIARFVERLGAFLVLVGLSGLAVGG VGVSTAVRAYLATKTETIATLRTLGSERRVIFLTYFLQIGVLSLCGITLGLILGGVGP LLLGPLIAAQLPFPAVFSIYPAALAESALYGVLTALLFTLWPLARTERIRAAALYRDA VSGGLQWPAPRYILATLATLGLLIAAAALFSGAPELALWTAGGLIGALVVLLIAGAAI GGLARMGNRMARGRPALRWALASIASARDGAMPAVLALGLGLTVLAAIGQIDGNMRRA IAGNLPDVAPSYFFVDIQRDQMPAFLERVEGDPQVSKVDNAPMLRGVITRINDRPAKE VAGDHWVIRGDRGVTYAAAKPASTNVTAGAWWPEDYTGPPQISFAAEEAEEMGLALGD TLTVNVLGRDITGTITSFREVDFSNAGMGFVLTMNEAALRGAPHSYIASVYAEEDAEA AILRDVAREMPNITAIRVRDAINRVSEILGQLATATAYGAAATLFTGFLVLLGTAAAA EPARRYEAALLKTLGAPRGQILRSFALRSAILGAAAGGVALLAGILGAWSVSHFVLET DYVVIWPNAVGVIGGGILVTLFAGLAYALRPLAARPARVLRARD" /product="ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO0433 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(719642..720106) /locus_tag="Silicibacter_711" /function="COG: Predicted transcriptional regulator" /translation="MRITKRTNIAVRLLMYCALNEGRLVTKSEIAARCNISENHLAQV VNQLSQLGFLKTQRGRNGGLALGRAAADICIGDVFRQVEGGLPMVECFADVDNTCPLV EACRLRDALTRAGEAFYGALDGISLESLTCDNIDLQRILSPLSCPSPAKTPA" /product="rrf2 family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0432 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 720776..721960 /locus_tag="Silicibacter_712" /translation="MISRSLLLLRRITRQLWFRVVAISLFSLLALAIAPLLAPILPPA WEDRFGREAVLPVLTILASGMLAVTTFSLNVMVSAYRTASSMATPRVYRLLLEDTVTQ SVLATFTGGFVYSLSAVILFRAGIYPPGSAFVVFVMTALVVMLIVLAILRWIDHLSDL GSMDHTLRLIESRSCSSLRARKETPCLGGCCLKTEPPSSASPIPASQSGFVRFVDMAA LNRRAKEAGVTLYLTRLPGEFVLRGRPVAMAEGADEAFCKEASGLIDVGDVRSFEQDP TFGLTLLAETAQRALSPGVNDPGTAYEVMGRLTRLLWENLPEDSEATKSDADFPHIHL PPVTASALLKASFPPIALYAGDAPEVMDWMQTSLKALEHHPNAAMTRAAQEMRQDYFE NS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1629 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(722039..723364) /locus_tag="Silicibacter_713" /function="COG: Glutamyl- and glutaminyl-tRNA synthetases" /gene="gltX-1" /transl_table=11 /note="identified by match to putative ortholog SPO0430 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="glutamyl-tRNA synthetase" /translation="MTTTRFAPSPTGYIHVGNLRTALMNYLIARKAGGTFILRIDDTD PERSKEEYVDAIKQDLEWLGITWDKVERQSERLDRYAEAADKLREIGRFYEAFETPTE LDLKRKKQLNMGKPPVYDRAALALSDAEKESLRAERGNGVWRFKLDQERIEWTDGILG DISIDAASVSDPVLIRGDGQVLYTIASVVDDTDMGVTHVVRGSDHVTNTATQIQIMAA LGHGHPEFAHHSLLTGPQGEALSKRLGTLALRDLREAGVKPMALLSLMARLGSSDPVE LRTDMAELVDGFDINRFGSAPTKFDAEDLYPLTARYLQTLPVATVKSELDAIGVPADT QEAFWAVAKENITTLKDLEGWWILCRDGAEPLIADEDKEFIAEAMTLLPEGPYDSESW GKWTAAVKEKTGRKGKGLFMPLRKAVTGMERGPDMSALLALMQTVRARG" /EC_number="6.1.1.17" CDS 723593..724531 /locus_tag="Silicibacter_714" /function="COG: Zn-dependent hydrolases, including glyoxylases" /translation="MTLKLSRRAALAGVAAAPIAAAVAAPARAAGHEAAKAPLHARAF KVGDYTVHSLLAGSTGRDGVKDIFGGGASDEAFSEVAAENFISDTSAQFYFTPTLVDT GSEKILFDTGLNAGGITKALADAGVTPEEVDVVVLTHMHGDHIGGMTDDSGAATFANA RYVTAAAEYDHWTAMPEGNGGADRVRAKVAPQAEKMSFIDDGGAVASGVTGMAAFGHT PGHMVYMIESAGQQLLLTADLANHYVFPFAHPEWQTSFDTDKDAASATRRRVLEMLAD SRTPMIGYHMPFPAAGYVERRGEGFRFVPVSYQMMG" /product="metallo-beta-lactamase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0429 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(724528..725829) /locus_tag="Silicibacter_715" /function="COG: Glycine/D-amino acid oxidases (deaminating)" /translation="MPGPQLPHFNSDRVLPKAVDVVIIGGGIVGASTALELAERGHSV LLCEKGQIAGEQSSRNWGWVRMSQRDPREMELMTHSQRIWEGLDMRTGYATGYTKCGI MFTAHTRKREAELSAWSEHLKAIGGEGHMLRGESLEQLTPGYGHRIRAGFYTPQDGCA EPQMATHAIASAARDKGAVVITGCAVRRLDVEAGRIRGVITEKGRVNATAVVVAGGAW SRLFLRNEGLFLPQLKVLNSVMRLSPVKGVPETALWAAGFGLRKRMDGGYTVASGGEN TFDIVPDTFRIGHRFIPAFLRDVTALRFRVSDRWRIESAEARPWSGQDRSPFEETRVL DPQPSQKALRRGLAAVRDAFPALEKADVTQSWGGLIDVTPDEIPVISEVISRPGLFVS TGYSGHGFGLGPGAGRLTADLVTGDAPIVDPRPFRLSRFGA" /product="amino acid deaminase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0428 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(725967..727646) /locus_tag="Silicibacter_716" /function="COG: NAD synthase" /gene="nadE" /transl_table=11 /note="identified by match to putative ortholog SPO0426 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="glutamine-dependent NAD(+) synthetase" /translation="MFSRTPMMADSFRITLAQLNPTVGDLAGNAAKALSAWQEGRAAD ADLVALPEMFITGYNTQDLVMKPAFHQAAIAEVEALAKATAEGPALAIGSPWVEDGKL YNAYLILKGGKIASKCLKHHLPNETVFDEVRIFDAGPLGGPYSVGNTRIGSPICEDGW HEDVAETLEETGAEFLLIPNGSPYYRGKMETRINHMVARAVETGLPVIYLNMVGGQDD QVFDGGSFALNPHGALAVQMPVFDECIAQLDLERTADGWRIKEGEKAHLPDAWEQDYR TMVLSLRDYMGKTGFKKALLGLSGGVDSAIVAAIAVDALGAENVRCVMLPSEYTSKES LEDAEAVAKALGVHYDYVPISEGREAITNTLAPLFAGRDADLTEENIQSRLRGLLLMA MSNKFGEMLLTTGNKSEVAVGYATIYGDMNGGYNPIKDLYKTRVFETCRWRNANHRDW MMGPEGEVIRPNVIDKPPSAELREDQKDSDSLPDYPELDAILDILVDQEGSIADCVAA GFDRDVAKRVEHLLYISEYKRFQSAPGARLTKRAFWLDRRYPIVNRWRDPS" /EC_number="6.3.5.1" CDS 727797..729299 /locus_tag="Silicibacter_717" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MIRINSTLLLTSLLSLNAAGLSAPAFAQDEQVLTTQDEIGGVYE GEFKGGLQHGQGTYKLPNAYEYSGQWVEGEIKGKGVARFPNGSVYEGEFSKGKPEGLG KITFADGGTYEGEWQDGVINGQGIAIYANGVRYEGSFVDAKHDGRGVMQNPGGYQYEG DWVAGRKEGTGKITYPDGTTYQGGVKDGKLHGLGTLVMPDGLKYEGEWADDQMNGTGV LTQPNGDVYEGPLVNGRRQGEGVLRYANGDVYEGQFDDDLRQGEGTFTGTDGYIYSGQ WQAGQIEGQGKVTYPDGSVYEGEFRDDLAHGVGKITYPDGSTYEGEWVAGVIEGNGKA TYANGAIYEGSFKNAKNDGQGVMTSPEGYRYEGGWKDSLRHGEAKVTYADGSVYEGAF ANGQRHGFGKITRPDGFSYEGQWVEGKIEGEGIATYANGDIYEGSFVGSKRQGPGTMR YASGQEASGTWNNGALTTPDAAASEADQSTDPAAEETPDAEAGSAGDESN" /product="MORN repeat protein" /transl_table=11 /note="identified by match to putative ortholog SPO0425 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 729308..730348 /locus_tag="Silicibacter_718" /translation="MATLLYLVHGAAVQQQQQLSYSVLSALKHGVDGVDLVLICDAAN RRPDLPLRHVVISPEQIAQWTDGGRRPARAQLHALDLALRETGGPVCWASTDSAFTAA PARLLERITPETPLFFDRDGWLTSRPEWSPIIDACKDSALSEQIQPSTEVFDTGILGL SPSDLDFINQSLSPSFWPRIPNIFDNFEQIHLCALLAQNAQELRFSHDLVQRYQGYMR HVYQGRLEAMFPPGGAVNTALAAQLPAITEPPKPLHLRLKAKAYALRRGLGHGTEFGY LAYLCAFAAPTPEGRNVWANIALDMMERSARAPQKLVKDLSKLAPEALPDAELSPQTE ERWRRYWMNAGL" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(730345..731964) /locus_tag="Silicibacter_719" /function="COG: Uncharacterized protein related to deoxyribodipyrimidine photolyase" /translation="MAGAGQGGGAENFQELSDCGWIFPPTAPVSTIMTRLVLVLGDQL SEGLSALKAADPAHDVVVMAEVMDEGTYVPHHPKKIALVLAAMRKFAQRLEGQGWRVA YRRLDEDGAESIVGELLRRAEEFGASEVLATTPGEWRLIHALKYAPLKVHFHADDRFL ATREDFTEWAEGKKQLRMEYFYRLMRKKTGLLMEGDTPVGGKWNYDSENRKAPPKIID HKGPPRFEPDAEVEEVLDLVEARFGTHFGDLRPFWFATTREEAQEALAHFITHALPQF GDYQDAMMTDERWLYHSILSPYLNIGLLTPLEICEAAEVAHQDGHAPLNAVEGFIRQI LGWREYVRGIYFLEGEDYPTRNALEQTRALPALYWGAETDMHCLSQAVEQTGQEAYAH HIQRLMVTGNFALLAGVDPAQVHEWYLAVYADAFEWVEAPNTVGMSQFADGGIIASKP YVSSGAYIDRMSNYCGSCAYKVKQKTGEGACPFNLLYWDFLNRHRARFEGNPRMGNMY RTWDRMDEEKRDVILQEASAFLAKLDAGERV" /product="conserved hypothetical protein" /transl_table=11 /note=", Deoxyribodipyrimidine photolyase-related protein, Deoxyribodipyrimidine photolyase-related protein" /note="Hypothetical protein" CDS 732228..733811 /locus_tag="Silicibacter_720" /function="COG: Isopropylmalate/homocitrate/citramalate synthases" /gene="leuA" /transl_table=11 /note="identified by match to putative ortholog SPO0422 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="2-isopropylmalate synthase" /translation="MTSKTDTVNQQDRVLIFDTTLRDGEQSPGATMTHDEKLEIAELL DDMGVDIIEAGFPIASEGDFKAVSEIAERSKNSVICGLARANFKDIDRCAEAVRKAAK PRIHTFIGTSPLHRAIPNLTMDEMAERIHDTVTHARNLVDNVQWSPMDATRTEWDYLC RVIEIAIKAGATTINIPDTVGYTAPRESADLIRRLIETVPGADEIIFATHCHNDLGMA TANSLAAVEAGARQIECTINGLGERAGNTALEEVVMAMRVRNDIMPFQTGIDTKKIMH ISRRVATVSGFNVQFNKAIVGKNAFAHESGIHQDGMLKNKETFEIMRPEDVGLAGTSL PLGKHSGRAALRDKLSSLGFEIGDNQLKDVFVRFKELADRKKEVFDDDIIALMRTSGD EDDHLKLVSMKVVCGTGGPAESTVEMEVDGKDVTETAEGDGPVDATFKAIRKIHPNAA HLQLYQVHAVTEGTDAQATVSVRLEEDGVIATGDSANTDTVVASAMAYIDALNRLIVR RDKMGEGADSREISYKDVD" /EC_number="2.3.3.13" CDS complement(733893..735149) /locus_tag="Silicibacter_721" /function="COG: Permeases of the major facilitator superfamily" /gene="yhjE" /translation="MTTTEANAQHSDVTFDDVIITVVMARVTDFFGFFVYAIASALVF PAVFFPHLDPMMGTLWSFALFSLAFLARPIASLLGRRLQLVIGRAGKVTVALMILGVS TVAIGLLPGYEAWGIGAPIALAALRFMQGLGLGGAWDGITLQLKAAAPKGQSGLYSMV PQIGGPVGFCVAAALFYVLTGFLSEEEFLTYGWRFAFFAVMAVNVVSLFARLRLLSTN FAGDDEVVLRSAPLGELMSQEWRTIVLSALLPLASYALFHMVTVFPLSYSLLFTESNL SSILLLQLAGGTLAIVTVILSGVLADKFGRPVVLWISSALILLLCLSIGTLERAPAIY IIFGFVVLGLAYGQSSAIVPDRFKPQYRYSGAAMATNLSWILGAAFAPLCGLVLAWTF GLWAAALYLLSGVIVTAVALVLLQRQ" /product="Proline/betaine transporter" /transl_table=11 /note=", Proline/betaine transporter (Proline porter II) (PPII)., Major facilitator superfamily, 2A0106: metabolite:proton symporter family protein" /note="High confidence in function and specificity" CDS 735360..736451 /locus_tag="Silicibacter_722" /function="COG: Heme/copper-type cytochrome/quinol oxidases, subunit 2" /gene="cyoA" /transl_table=11 /note=", [EC:1.10.3.-] , Ubiquinol oxidase polypeptide II precursor (EC 1.10.3.-) (Cytochrome o subunit 2) (Oxidase BO(3) subunit 2) (Cytochrome o ubiquinol oxidase subunit 2)., Cytochrome o ubiquinol oxidase subunit II, COX Aromatic Rich Motif, CyoA: ubiquinol oxidase, subunit II" /note="High confidence in function and specificity" /product="cytochrome o ubiquinol oxidase subunit II" /translation="MRYLRFLCCALAFLTLSGCNLVLLSPSGDIAAQQGDLIVYSTVL MLIVIIPVMALTVFFAFKYRAENKDARYEPDWDHSVSLEIVVWFVPLAIIICLAGLTW VATHRLEPYDDLRRVSETKPIDPNVEPMEVQVVALDWKWLFIYPEYGVATVNEAAAIV DRPVEWKLTSSTVMNAFYIPEMAGMIYAMAGMETELNAVINEPGTFEGFSANYSGNGF SHMRFDFIAEDEAGFEAWIEEVRASGMTLDQDSYAVLEQPSVAHEVEYFGAVEDGLWD KILNMCAGPNALCLNDMMMVDALGGGGLAGLYNRELYRGICSADDPEALLAMLRPDIQ EEQQREDILQAMTLTSGDLLPNSNTTEAN" /EC_number="1.10.3.-" CDS 736455..738491 /locus_tag="Silicibacter_723" /function="COG: Heme/copper-type cytochrome/quinol oxidases, subunit 1" /gene="cyoB" /transl_table=11 /note=", [EC:1.10.3.-] , Ubiquinol oxidase polypeptide I (EC 1.10.3.-) (Cytochrome o subunit 1) (Oxidase BO(3) subunit 1) (Cytochrome o ubiquinol oxidase subunit 1) (Ubiquinol oxidase chain A)., Cytochrome c oxidase, subunit I, Cytochrome C and Quinol oxidase polypeptide I" /note="High confidence in function and specificity" /product="cytochrome o ubiquinol oxidase subunit I" /translation="MATIPAATAAAQSSDALNQTHWFWGKLGWDIFPFYDPIIFGTFI GTCILAAGVVGIVLYYRLLPYLWNEWFTTVDHKKIGIMYMILAVVMLVRGFADAVLMR LHQALASAGYVGFLPAYHYDQVFTAHGVIMIFFVAMPFITGFMNYVMPLQIGARDVAF PFLNNFSFWLTVSGAVLIMISLFVGEFAATGWLAYAPLSGLKFSPGVGMDYYLWSLNI AGIGTTLSGINLVVTLVKMRAPGMTWMKLPIFSWTTLCTNILIVVTFPVLTATLALLT ADRYLGTHFFTNEMGGNPMMYVNLIWIWGHPEVYILILPIFGIFSEIVATFCGKRLFG YASMVYATCVIMVLSYIVWLHHFFTMGAGADVNSFFGITTMIISIPTGAKLFNWLFTM YKGRIRFELPMMWTIAFMLTFVVGGMTGVLLAVPPADYVLHNSLFLIAHFHNVIIGGV VFGIFAGITYWWPKAFGFHLDPFWGKVSFWGWVGGFWVAFMPLYLLGLMGVTRRLSQF EDTIYAGYFFTALIGALMIAVGLLAFLVQIFVSIRNREKLAVGNDPWGGRTLEWSTTS PPPYYNFAFTPRVYERDAWHHMKTHDAKAPTSGFVPIHMPHYTASGIILAGLMTVMGF ALVWHIWWLSALMFLASLAYGIAHTFNYNRDYYVPAEEVSEIETGQRTVATPAE" /EC_number="1.10.3.-" CDS 738541..739140 /locus_tag="Silicibacter_724" /function="COG: Heme/copper-type cytochrome/quinol oxidase, subunit 3" /gene="cyoC" /transl_table=11 /note=", [EC:1.10.3.-] , Cytochrome c oxidase, subunit III" /note="High confidence in function and specificity" /product="cytochrome O ubiquinol oxidase subunit III" /translation="MSPKIPMQVMGDHHHDTGTMLGFWIYLMSDCLIFGILFAVHAVV GTSYAAGPSPADLFEIDKILLATFFLLFSSITYGFAVINMQQRKQRAMMLWLGVTLVF GLGFLVMEILEFQHLWHLGAGPGASAFLSSFWVLVGTHGLHVTAGAIWLVVLLVQVQM HGLTEANTRRILCLSMFWHFLDLIWIGVFSFVYLTGVLL" /EC_number="1.10.3.-" CDS 739137..739484 /locus_tag="Silicibacter_725" /translation="MSAHSHGSYKSYAIGFVLSVILTVIPFWLVLGEVDIGVNTAIAV IFGLGAVQIIVHMHYFLHVTYGAEDGWQVMSLVFTGILLIIVLAGSIWVMAHLHENMM PAHEQIERVRNLP" /product="Cytochrome o ubiquinol oxidase protein cyoD" /transl_table=11 /note=", Cytochrome o ubiquinol oxidase protein cyoD (Ubiquinol oxidase chain D)., Prokaryotic Cytochrome C oxidase subunit IV, Prokaryotic Cytochrome C oxidase subunit IV" /note="Specificity unclear" CDS 739481..740212 /locus_tag="Silicibacter_726" /function="COG: Uncharacterized conserved protein" /translation="MSTGTSTEGGGRRRPFWVDAVILALAFGVFVTMVRLGNWQMQRL SWKLDLIEQVETRAFGPPVAAPIKGAAPEYQRVTLQGVFRHDLSLRIKAVTEIGPGSW VMTPIEGAEQTVWVNRGFVPPQMRLDEINRPEGLQEITGLIRSDQPGGTLLEQNLPDR DRWVSADLALMSADRGIEAAGYYIDAAHQGAAADWPRGGMTQLDFRNTHLSYALTWYA MAVLFFGAMAYVIWDRLRAPKERTS" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Surfeit locus 1" /note="Hypothetical protein" CDS complement(740269..740664) /locus_tag="Silicibacter_727" /function="COG: Lactoylglutathione lyase and related lyases" /gene="lguL" /transl_table=11 /note=", [EC:4.4.1.5] , Probable lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D- lactoylglutathione methylglyoxal lyase)., Glyoxalase/bleomycin resistance protein/dioxygenase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily" /note="High confidence in function and specificity" /product="lactoylglutathione lyase" /translation="MTKLAHSMIRVLDETASVAFYKAAFDMEIADRLDFDDFTLIYLT APEGSFELELTVNKSQTEAYDLGNGYGHLAVVVEDLEAARAKVETAGGAPRDIVDFRP AGERVARFFFVADPDGYQIEVIEAGGRFK" /EC_number="4.4.1.5" CDS complement(740747..741166) /locus_tag="Silicibacter_728" /function="COG: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases" /translation="MTAYDNDNIFAKILRGEIPSMRVYEDDDTLAFMDIMPRADGHLL VIPKTPCRNVLDASAAQLEAVIRSVQKLAQASKAAFDADGVTIQQFNEAAGGQEVFHL HFHVLPRHEGVSLRASGQMGDMEAIAAHAEKIRAALA" /product="HIT family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1386 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 741489..743147 /locus_tag="Silicibacter_729" /function="COG: Heme/copper-type cytochrome/quinol oxidases, subunit 1" /gene="ctaD" /transl_table=11 /note="identified by match to putative ortholog SPO1383 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="cytochrome c oxidase, aa3-type, subunit I" /translation="MADAAIQGHGHEDERSFFTRWFMSTNHKDIGILYLIVSALTGFI SVAFTVYMRLELMDPGVQYMCLEGFAADPCTPNGHLWNVLITGHGVLMMFFVVIPALF GGFGNYFMPLQIGAPDMAFPRMNNLSFWMYVAGTALAVSSVYAPGGNNQLGAGVGWVL YPPLSVKEGGIAMDLAIFAVHVSGASSILGAINMITTFLNMRAPGMTLFKVPLFSWSI FVTSWLILLSLPVLAGAITMLLMDRNFGFTFFDAAGGGDPVLYQHILWFFGHPEVYIV ILPGFGIISHVIATFSRKPVFGYLPMVWAIIAIGVLGFVVWAHHMYTVGMSLNQQAYF MLATMVIAVPTGVKVFSWIATMWGGSIEFKAPMVFAFGFLFLFTVGGVTGVVLSQAAV DRAYHDTYYVVAHFHYVMSLGAVFAIFSGIYFYFGKMTGRQYSELGAQIHFWMFFIGA NLTFFPQHFLGRQGMPRRYIDYPEGFAYWNKISSYGAFLSFASFIFFFGVVIYSLLRG ARVTQNNYWNEYADTLEWTLPSPPPEHTFEILPKQEDWDKSHSH" /EC_number="1.9.3.1" CDS 743289..743783 /locus_tag="Silicibacter_730" /translation="MPYDWTQPPSDHGGELHLWPHQSLPPEGYMRFIGATAALITVPL LPLMGTPLFWGLIPFLTLAVFGMKYALDQNRRHAQIIEVLRLGPEEAELIRRDARGSE QSWRCNRHWTQVSLHPDRGPVPNYVTLRGAGREVEIGAFLSEDERKALYHDLRDAIRQ SDSR" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1381 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(743882..744355) /locus_tag="Silicibacter_731" /function="COG: Uncharacterized conserved protein" /translation="MDTRTRVNEALKQAMKDKAMERLCTLRLINAAIKDREIAARGDG EEGGIGDEEILAILGKMTKQRKESVRAYEEGGRLDLAEREMNEIEIIEEFLPKQLSED EVSNAVKAAVDETGAESIRDMGKVMGALKAKYTGQMDFGKVGPMVKDQLCSAGGC" /product="GatB/YqeY domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1378 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 744530..745690 /locus_tag="Silicibacter_732" /function="COG: Carbamoylphosphate synthase small subunit" /gene="carA" /transl_table=11 /note="identified by match to putative ortholog SPO1377 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="carbamoyl-phosphate synthase, small subunit" /translation="MVETVSPKPTACLALADGTVFYGHGFGATGRCVAELCFNTAMTG YQEIMTDPSYAGQVVTFTFPHIGNTGVTPEDDETADPVAAGMVVKWDPTLSSNWRATE ELKSWLTRTGRIAIGGVDTRRLTRAIRQQGAPHVAMEHNPDGNFDLEALVAAARAWPG LEGMDLAKDVTCAQSYRWDEMRWAWPEGYTRQEEPKHKVVAIDYGAKRNILRCLASAG CDVTVLPATATSEEVLAHGPDGVFLSNGPGDPAATGAYAVPMIKEILDKTDLPVFGIC LGHQMLALALGAKTTKMNHGHHGANHPVKEHGTGKVEITSMNHGFAVDAQTLPEGVEE THVSLFDGSNCGIRMTDRPVYSVQHHPEASPGPQDSFYLFERFAEAMAARKA" /EC_number="6.3.5.5" CDS 746084..747613 /locus_tag="Silicibacter_733" /function="COG: Glycosyltransferases, probably involved in cell wall biogenesis" /translation="MLGRTALVLMADPASLAALRQDLRGQFDEVIPIPTPAAEIEAIL LRALQAQMTREAARSVAPALSCRSFDYRAARAPAFATGTLLCLFSILAPHLVTAVLAV ASLVTLLMFTALRISGLLAAARPDQPKSETPKDLPQMSMLVPLYREAEIGKHLLRRLC RLTYPRDRLEVLLVLEENDDVTRNAVKCADLPDWFRVVEVPGDGTLTTKPRAMNYALN FCRGEIIGIWDAEDAPAPDQLESAASAFAHAPPDVVCFQGILDFYNPSRNLISRCFTL EYAGWFRVLLQGIARLGLVIPLGGTTLFIRRDALEQLGAWDAHNVTEDADLGVRIARA CYRTEMLPTTTYEEANSRITPWIKQRSRWLKGFMMTYLVHMRAPKALLRDVGWRRFWG LQAFFLGTLGQFLLAPVLWSFWLVALGVSHPLEASLPRDMLSVAVGALVFFEVLNLCI WYCGARASGRPVLAFCAPLMPLYFILGCFAAYKALWEVFAAPFFWDKTAHGDHGGTTE H" /product="glycosyl transferase, group 2 family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1376 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(747616..748266) /locus_tag="Silicibacter_734" /function="COG: Transcriptional regulators" /translation="MSQTKSSTQKDAYGLILDAIDVGMFKPGDRLVENDLADRFGVSR TPIREALQRLETQSLLERDGRSLIVASLDHNQMAELYVVRRELEGLAAALAARHATDE EVQVLRDMVEADDALIDNPVELAKANRRFHQQIHLASHNRYLVQQLDLVHRSMALMAT TSLAAEGRGRIAQDEHKAIVAAIANRDEAAAGQALKDHISVAFTTRLKQDAGARGG" /product="transcriptional regulator, GntR family" /transl_table=11 /note="identified by match to putative ortholog SPO1375 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 748393..749037 /locus_tag="Silicibacter_735" /function="COG: Predicted hydrolase (HAD superfamily)" /translation="MVKQSFSHVEHWVFDLDNTLYHPSARLFDQIEAKMITYVMETLQ IDHGAADKLRGDYWRNHGTTLAGLMKEHDIDPDPFLVAVHDISLDHLEPDQTLAGHIK ALPGRKIVYTNGSAPYAERVLAARGLTGLFDGIFGVEHADYRPKPERSAFERVFERAG VDTTRAAMFEDDPRNLNAPHAMGMRTVHVAPEAHPGDHIHHHTEDLTAFLGQLR" /product="pyrimidine 5'-nucleotidase" /transl_table=11 /note="identified by match to putative ortholog SPO1374 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 749122..749370 /locus_tag="Silicibacter_736" /translation="MTAYTLPPKLSTFERIMFRVPLLGRIWKEVSYGDEENIYYAIAT FLSLWGISVMLFGLPGLYLPALALVPVIWILLILISRG" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1372 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 749456..750652 /locus_tag="Silicibacter_737" /function="COG: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases" /translation="MNQTCDILISGGGIAGLTAAAGFAARGFSVICVDPTAPVTTRED AGADLRTTAFLQPAKSLLEEAGLWSRFAPHAAPLQIMRIIDAGGADPEPRVVREFNAA EISELPFGWNLPNWLLRREMLGRIAELANAEFRPGVGTQSLFTRTNEARVTLTDGSRV HCKLVLACDGRASPMREAAGIDVQTTRYGQKALAFAVTHDTPHENVSTEIHRTGGPFT LVPLPDLEGRPSSAIVWMETSANADRLAALDEVDFEAEMNIRSCGVLGQLSLASRRTL WPIISQRASRLVGERLALMAEAAHVVPPIGAQGLNMSLADLRVLMDLADARPEGLGDQ AMLNAYEKARHSDIKLRVSGIDLLNRASMMEARPLRDLRAGGLNALYSLPQVRKMLMQ MGLGVR" /product="2-octaprenyl-6-methoxyphenol hydroxylase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1371 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(750722..751846) /locus_tag="Silicibacter_738" /function="COG: Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase" /translation="MALLETVDPDGLDEFSVVFTDRSLNHMSKEFQQVMLDINAMLKE VYKADATALVPGGGTFAMEAVARQFARDQDALVVRNGWFSYRWSQIFESGGLTKSATV LKARQIGNGAQSPFAPAPIEDVTKAILEQKPSIVFAPHVETSAGVILPDDYVTRMATA AHEVGALMVLDCIASGCAWVDMRATGVDVLISAPQKGWSASPSAGLVMLSKRALARLE ETTSDSFAIDLKKWRAIMQAYEDGGHAYHATMPTDALRQFRDTMAETKAYGFKRLREA QWKLGNGVREMLAKKGVTSVAAEGFGAPGVVVSYTDDPQIQNGKKFSDQGMQIAAGVP LAVDEPDGFMTFRLGLFGLDKLYDVNGTLSRLKTVLDQLL" /product="aminotransferase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1370 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(751969..752427) /locus_tag="Silicibacter_739" /function="COG: Transcriptional regulators" /translation="MTGLDATDLALLRALSQDATQTAGALGRALGLSQPATWRRIKRL EEAGILSHRVLDLDLQKLGFGVTVFVGVKLATKGRVSLDDFERAVSAIPEVQTVEHVL GFYDYRLRVVARDIADFERVLRRRIMTLPGAGNVDANVLLSEERRPGPLG" /product="transcriptional regulator, AsnC family" /transl_table=11 /note="identified by match to putative ortholog SPO1368 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(752424..752879) /locus_tag="Silicibacter_740" /function="COG: Transcriptional regulators" /translation="MLDDLDRRILRNLQDDPTQSLPDLADRLGLTSSRLSRRLEKLRE GGVLLGVRAVIDWQALGYAVEVSLRVTLDKTNPRAFDEFIPAAREIPEVLEIQTFLGQ VDVRLSVIARDMAHYQALYRDHILQLPNITDIEALMHVARITTRTALPL" /product="transcriptional regulator, AsnC family" /transl_table=11 /note="identified by match to putative ortholog SPO1367 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 753018..754040 /locus_tag="Silicibacter_741" /function="COG: Ketol-acid reductoisomerase" /gene="ilvC" /transl_table=11 /note="identified by match to putative ortholog SPO1366 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ketol-acid reductoisomerase" /translation="MRVYYDRDCDVNLIKEKKVAILGYGSQGHAHALNLRDSGAKNLV IALREGSPSAKKAEAEGLQVMGIAEAAAWCDVIMFTMPDELQAETYKKYVHDNIKPGA AIAFAHGLNVHFGLIEPKEGVDVIMMAPKGPGHTVRGEYTKGGGVPCLVAVHNDASGS ALETALSYCSAIGGGRSGIIETNFREECETDLFGEQAVLCGGLVELIRCGFETLVEAG YAPEMAYFECLHEVKLIVDLIYEGGIANMDYSISNTAEYGQYVTGPRILKYDETKARM KEVLADIQQGKFVRDFMLENAVGQPTIKASRRANDEHAIEATGAKLREMMPWISAGKM VDKSKN" /EC_number="1.1.1.86" CDS 754192..755091 /locus_tag="Silicibacter_742" /function="COG: Permeases of the drug/metabolite transporter (DMT) superfamily" /translation="MPEIAPRYWAMVAALGLTWGGTFMVVELALRGITPFWLAAGRIG FAALLLTSIWGLRGFRLFETRANWPVVIFVGLLSSTLPFILISWGLQHVTSGFAGVSM AAIPLMVLPLAHFFAAEPLTPRRLLGVIIGFLGVALLIGGQAFESNGSDLEWAGRLAC LTAAACYSVSSISVRRLPAVDSVGLAAVLLLIGALGILPAAWLVEGPPPAISSETWMW LAILGLIPTAGANLLRVLVIRGAGPTFMSLTNYLVPVCAVLFGALFLKEALPSVLLWS LALILAGVALSQYGALKRLFGLS" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1365 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(755212..756555) /locus_tag="Silicibacter_743" /function="COG: Phosphomannomutase" /gene="glmM" /transl_table=11 /note="identified by match to putative ortholog SPO1364 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="phosphoglucosamine mutase" /translation="MRKLFGTDGVRGKANMHPMTAEMALRIGAAVGRYFRRENDTVHR VVIGKDTRLSGYMFENALTAGLTSTGMNVLLLGPVPTPAVGLMTRSMRADLGVMISAS HNPAEDNGIKFFGPDGYKLSDEVELELEALIEAGVEPAQAQNIGRAKRIDDARFRYGE RVKSSLPRDMRLDGLKVVIDCANGAAHRAAPEILWELGADVIPVGVSPDGLNINRGCG STQPAAAAETVVAHGADVGICLDGDADRVVVIDETGTVADGDQLMALLASAWSADGRL SGGALVATVMSNLGLERFLNERGIGLERTGVGDRYVVERMRQGGFNLGGEQSGHIVMS DYATTGDGLMAGLHFLAEMVRRGQKASELARQFEPVPQLLKNVRFEAGQAPLEADQVQ TAIAEAEKQLNGRGRLLIRKSGTEPLIRVMAESEDPVLLNRAVDDVVAAVEAATQ" /EC_number="5.4.2.10" CDS complement(756616..757611) /locus_tag="Silicibacter_744" /function="COG: Dihydropteroate synthase and related enzymes" /gene="folP" /transl_table=11 /note="identified by match to putative ortholog SPO1363 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="dihydropteroate synthase" /translation="MSYYRPLVRHGDARPEGAIHLAGSALWFTEVEVLDRSAPPRIVP AGLLPEEIRFRLMSRRAAIAGLDMTQPQIMGILNVTPDSFSDGGQFDEVDVACDAALQ MVADGASIIDVGGESTRPGAAEVEELAEITRTAPVIAAIRDQSDVAISIDTRKATVGM EALEAGASLINDVSGFTFDAALAPLAAQAGVPVCVMHAQGDPKTMQDNPHYENVVLDV YDFLAAQVDQLEAIGVLREQIVIDPGIGFGKTEAHNLALLRNLSLFHGIGCPILLGVS RKGFIGAIGKEPQAARRAPGSIAVGLAGFAQGVQLLRVHDVAETAQALRLWQATR" /EC_number="2.5.1.15" CDS complement(757608..758528) /locus_tag="Silicibacter_745" /function="COG: Dihydroneopterin aldolase" /translation="MSSDIHLAFAHPSERSAATARPGALDRISLRDHIVEVEIGAFQQ ERGTTQRVCFNVVVEIAPLPADLDDDVDRILSYDKVTEAIAHELARERLALLETLAER VAERILWEPQAVRAFVRIEKLDRGPGKLGVEIVRSADQVSHEADEDVKPHPRLMFLSN AAIDSDNLTGWIDQMECRERPLILCVGAHDLALPQTGHKWTQRRIDLLAIEQNAWRLA ARDSRCKVVETRTELDWAMKNGQICVWAPSKIVLDAVEGPSEPPSNAVALAAWFASTF EAEEMIVIGAELPENPGVPLRAHAEEQHTL" /product="dihydroneopterin aldolase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1362 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(758681..759325) /locus_tag="Silicibacter_746" /function="COG: Cell wall hydrolyses involved in spore germination" /translation="MKRKLMWAAVVAATLGGSMASADMGLDALFKQEQSTLQAAPKER MLRFLGGKRQTRTNGVTQVEFTRDFLDSRPAATGGSEFECLAEALYFEARGETVKGQF AVAEVIKNRVQSAQFPNTFCGVINQGTGRKYQCQFTYTCDGHKEVIHEPRAFERVAKV ARLVLDGVNPKLTQGATYYHTTAVSPRWSRKFTKTARIGVHLFYRDERYRTASN" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1360 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(759495..762059) /locus_tag="Silicibacter_747" /function="COG: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase" /gene="ppdK" /transl_table=11 /note="identified by match to putative ortholog SPO1359 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" /product="pyruvate, phosphate dikinase" /translation="MDTTPKSTLITATAPIANQTHGGRAKCLQRLVRLELPVPQTVAL SFDAVHEIAEGYMVDVNAILADLRPGALLCVRPSSEDPDWGGPGAVLNIGMNDARYVE LSDTLGPAAAAALYLRFVQSYAVHVARLDPDVFEDVEDGGPDALSEMLQAYEAEAEEP FPQDPGEQLAAVLRSMARAWEGTSARLLRAAKGAPEDAGLGLIVQEMVPGLGQGECGS GVLQLVNSQTGLPQITGRYLSQSQGRDALGVDAEAIYLEQDERGPSLEELAPEAFAEL KAHAALMRRKLRAEMQVEFVIENGRVHILDGVRVPRSSRAAVRIAVRLAEDGIIPAEE ALMRVDAYSLNELLHRQVDPNAKRDVIGSGIAASPGAATGRLVFTATEAQASKSRGEP CILARRETSPEDVRGMHAAAGVLTEKGGMTSHAAVIGRGLGLPCIVGASRLRFDSRRK QLTAPDGRVFKAGEIITVDGTSGEVLAGEPAMVEAAEDDALVTLMAWADAARDIAIRA NADTPADAQTARNFNAEGIGLCRTEHMFFDPGRLTVMREMIFAETSSGRAAVLARLLP MQRKDFRELFRIMEGLPVCIRLFDPPLHEFLPTTTAGQRELSEALGLPVSDVTRRVAE MGEYNPMLGLRGVRLGVTVPEIYDMQARAIFEATLEASRDGAPVVPEIMIPLVSAKRE VELVKARIDAVAAAVKSERGADFTYRLGVMVETPRAALRADEIAAHTAFMSFGTNDLT QMTYGLSRDDAGRFMSAYVQQGVFPEDPFHVLDVDGVGELLQLGVQRGRMAKPEITLS ICGEHGGNPESIAFCREAGFDYVSCSPFRVPVARLAAAQLAIADKTGQIAPTYIKN" /EC_number="2.7.9.1" CDS complement(762220..764283) /locus_tag="Silicibacter_748" /function="COG: Glycyl-tRNA synthetase, beta subunit" /gene="glyS" /transl_table=11 /note="identified by match to putative ortholog SPO1358 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="glycyl-tRNA synthetase, beta subunit" /translation="MADLLIELFSEEIPARMQARAGEDLKKRMTDGLVEAGLTYAGAH ALTTPRRLTLAIEGLLDHSPTVREERKGPKVGAPEKAIEGFLRGAGLTRDQLEERDTP KGAVYFATIEKPGRPAAEIIAEVLEDTIRNFPWPKSMRWGAGALRWVRPLHSILCLLT REEGSEVVPLEIDGVTSGDSTAGHRFMAPARFAVTGFEDYAAKLKRAFVVLDPKEREA AIWQDATNQAFASGLEVVDDKGLLAEVAGLVEWPVVLMGSIDAEFLDLPPEVLQTSMK EHQKFFSVKNPKTGRIEKFITVANRETADNGATILAGNQKVLSARLADAKFFWENDLR IAKSEVGVEGWLESLGNVTFHNKLGTQAARIDRIAALAREIAPVVGADADLAEQAAKV AKADLSSEMVYEFPELQGLMGRYYAQAAGLPQEVANACELHYSPLGPSDDVPTEPVSV AVALADKIDTLTGFWAIDEKPTGSKDPYALRRAALGVIRLVLSNDVRVGLKEVFAKAY EGADGSDLLSFFHDRLKVFLRDQGIRHDVIDACIAMEGSDDLTLLVKRARALEDFMKS EDGENLLQGFKRANNILSQAEEKDGVEYSFGADKKFVEDPAEAALFEALAANEAAIST AIEAEDFAAAMGGMAALRAPVDAFFEAVQVNSDNPVVRRNRLNLLSQIRKVCGQVADL SRIEG" /EC_number="6.1.1.14" CDS complement(764361..764888) /locus_tag="Silicibacter_749" /translation="MTGKILSIILIVSGLVAGIAMYYLQVYGFYDEVVAEPGRDVVLM PIGGEAPQAIAYSDFKAIDADSSPIRYRACFATPLKPAELAQLYELSEARDPRNAPEW FDCFDAAAIGAALKDGRARAFISEKNIEFGVDRIVAVTEDGRGYVWHELNNCGEKAYD GTIVGEECPKRPQSN" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(764911..765861) /locus_tag="Silicibacter_750" /function="COG: Glycyl-tRNA synthetase, alpha subunit" /gene="glyQ" /transl_table=11 /note="identified by match to putative ortholog SPO1355 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="glycyl-tRNA synthetase, alpha subunit" /translation="MTQTTAPRSFQEIILRLQTYWASKGCAILQPYDMEVGAGTFHPA TTLRSLGSKPWAAAYVQPSRRPTDGRYGENPNRLQHYYQYQVLIKPSPPDLQELYLGS LEAIGVDMDLHDIRFVEDDWESPTLGAWGLGWEVWCDGMEVSQFTYFQQVGGHDCHPV SGELTYGLERLAMYILGVDHVMDMPFNDPQSPQPLSYGDIFKQTEEEYARWNFDVANT EVLLRHFEEAETECAAILAQEHTDPKTGKRIIMAHPAYDQCIKASHVFNLLDARGVIS VTERQAYIGRVRALAKQCADAFVLTEAGGHTEETAGETAA" /EC_number="6.1.1.14" CDS 766158..767948 /locus_tag="Silicibacter_751" /function="COG: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain" /translation="MKNLFASVLWAVILCLSALSGASQAQQSSAGGVWIQVAARPSLQ QAQEEARNFAARLPDVSGYALGGGWYGIVIGPYARPDAEQVLRVYRAEGQIPRDSFIT FSSNLRSRFYPVGADADTGTTAPAPLTTSDAETAPPEPAEDATSEVTPEVVVVDETPA EARQSERALTREERMDLQIALKAAGFYTSGIDGAFGRGTRASMSDWQVARGYEPTGVL TTAQRQALMDEYNAPLISTGMASYTDERAGIRMDLPLGEVAFSRYEPPFAHFDTAGDL GARVLLISQPGDRRTLYGLYDIMQTLEIVPLEGPRERSGDRFTLEGRNSDIVSYTEAR LDNGEIKGFTLVWPAGDEARRARVLSAMQESFTRLENVLDPAAGMDDAQSIDLVSGLE IRKPRLSRSGFFVSGDGVVVTTADVVNGCGSVTVDRDVKAEVLLRDSEAGIAVLKPSE ALAPMATAPLAANTPRLRSALAVSGYSYGGILGAPSLTWGALSDLKGLQGESHLARLD LTAQPGDAGGPLLGKDGTVHGMLLPEATNGPTLPEGVRFALKGEVIRMALEQAGVGLP ATEAAATGELPISILQKEATGLTTLVSCWE" /product="peptidoglycan binding domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1354 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(768055..768504) /locus_tag="Silicibacter_752" /function="COG: Ribose 5-phosphate isomerase RpiB" /gene="rpiB" /transl_table=11 /note="identified by match to putative ortholog SPO3180 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ribose 5-phosphate isomerase B" /translation="MTASKRIVLSSDHAAIALRRTIAKHIEALGYTVTDLGPTTPEST HYPKHGEAAARHVAAGESDLGILLCGTGQGIMMAANKVKGIRCGVCSDTFSAQMIRAH NDANMLSIGARVVGEGLALEIVDAFLKTEFEGGRHGTRVDMITEIEG" /EC_number="5.3.1.6" CDS complement(768630..769271) /locus_tag="Silicibacter_753" /function="COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /translation="MHVVVTGSSRGIGRELKTRLSERGDRVTGTSRDHSSGTRLDVSD PGQQARFAAQIKGDPVDLLICNAGVYLDKSMALKDYTAEVWAKSLAVNVTGVFLTVQA MLPNLKLADEPKIAIISSQMASHARAPGGSYAYRASKAAALNIGRNLATDLKPEGIAV GIYHPGWVRTDMGGQDGDITVEESALGLINEFDVLSLDTTGCFHTWDGQVHAY" /product="oxidoreductase, short-chain dehydrogenase/reductase family" /transl_table=11 /note="identified by match to putative ortholog SPO3051 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(769342..769857) /locus_tag="Silicibacter_754" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MIRYALKCAEGHGFESWFQSAAAYEKLRGAGMVACTLCGSTEVE KALMAPRVRPGRKAASAPAGEAVATPSAGNVPSQNLPAQTAPAAPAPTSLAAPSNELE AAIAELKKQVEANSDYVGKDFVKEARDMHLGDAPARSIHGEAKPEEAKALIEEGVPVV PLPFAPTRKTN" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3052 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(770132..770908) /locus_tag="Silicibacter_755" /translation="MGELPGEILEPSARSLSLRDVDAELDAIAVRYRAAGSFGMRLLN ALGGQGEDLMRRLPAPVQGAIEAAVLQALHLSVRGAALSRRVVPDQPARTNRWVSTTM GMVGGAAGLPGALVELPATTTFLMRSIQGVAQDYGFDPNAKSVRFDAVEVFAAAGPMA HDDGADTGFLTLRLGLSGASLSQLIAVVAPRLAVALGPKLAAQMVPVLGAVAGGSVNY VYSGYYQEMAHVHFALRRLALEADTPYPQMVERLQQRLLT" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3054 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(770998..771498) /locus_tag="Silicibacter_756" /function="COG: Predicted acetyltransferase" /translation="MITIAPETPEDSWEVEALYDLCFAPGRTALSSYRLRDGVAPVQR LSQVARDSDGILAGAIRFWPVHVGTQDALLLGPVAVHPTRQGEGIGAALIRDSLWKAE DSHWQRVILVGDAPYYQRFGFERLDGVEMPPPTNPERVLGLALNPGAWGGVRGQVTRW SGAAQG" /product="acetyltransferase, GNAT family" /transl_table=11 /note="identified by match to putative ortholog SPO3055 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 771608..772213 /locus_tag="Silicibacter_757" /function="COG: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family" /translation="MFYRPEDGHGLPHNPFNAVVTPRPIGWISTRSGAGVNNLAPYSF FNAVAYVPPQVMFASTSTKDDQDGTKDSIANIRETGVFCVNVVEYAMRDAMNKTSAAL DKGIDEFAHAGLEAVPCETIDCARVAGVPAALECRLTQIVDLPGEANKVAFGEVVGVH LRDDCLVDGVFDVTRYQPLSRLGYRDYAKVSDPFSLSRPDD" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3056 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 772167..772856 /locus_tag="Silicibacter_758" /function="COG: Acetyltransferase (isoleucine patch superfamily)" /translation="MPRSAIRSPSRARTTDMPLPDPRLRHPIVLPDGTPHAGTVLLAR VVENPNFIVGDYTYASDFEPPRDWGSHLAPYLFAGAREQLKIGRFCQIAHGVKFITAS ANHAQEGLSCYPFPVFDPAQMAGFQPDTRDTVIGNDVWIGYGTLILPGARIGDGAIIG AGAVVRGTVPPYAIMTGNPASIARHRFSKPQIARLLALKWWDWPADLILRAEPAITSG DLDMLEALAPD" /product="streptogramin acetyltransferase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3057 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(772958..774568) /locus_tag="Silicibacter_759" /function="COG: Sulfate permease and related transporters (MFS superfamily)" /translation="MTRGVLGLLAKNISPPNLSIMQDEGFTVARVRTELLSGLTVALA LVPEAVAFAFVAGVHPLVGLYAAFLVGLITALIGGRPGMISGATGALAVVMVALVAEH GVEYLFATVVLMGILQVIAGVMHWGKFIRLVPHPVMLGFVNGLAIVIFLAQLTQFKQP GTGGEEWLAGPQLLMMLGLVVLTMVIIWGMPKLTKVIPAPLAGIGITAIIVIAFGLDV PRVGDMASIEGGLPSFHVPMVPFNMETLQIILPYAVILAAIGLIESLLTLNLVGEITG KRGGASQECIAQGTSNIVTGFFGGMGGCAMIGQSMINVNSGGRTRIAAIAAALFLLLF IVAASPLIEQIPLAALVGVMFMVVIGTFAWNSFKIMTKVPLTDAFVIVLVTVVTVMTD LAIAVVVGVIVSALAYAWNNARRIHAITRDSVSEKGAKVYEIQGPLFFGSTDGFIELF DVENDPDVVIVDFAASRVVDQSALQAIEAVAGKYEAAGKALQLRHLSRDCHELLSKAG HLMVDSDDDPEYGLAVDYSVKTGVLGGH" /product="sulfate transporter family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3058 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 774851..775180 /locus_tag="Silicibacter_760" /translation="MHFKSWDDISPPPNAAEQQLKAAAEAGVLCELGPRDQIPEEPAN WQTLTAAQEARHIRAEVLRLILLNGDGCDVTKRSVAMFGAYISGSLDLTNCIIPGNLL LYNCPLE" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 775424..776356 /locus_tag="Silicibacter_761" /translation="MSCKGTTFNTPKGMALTLRDAEITGGLYLSNITQIRGILDLSDA KTSILVDNPHSYPPTGALILDGFTYDRIIGSTDSKTRLEWLAKGDRWNGEFFPQPYKQ LAKTLHDMGHEADARQVRITLACKLRQEARAKLRITPNGDLSTGLHSIWRDILRLCLG GKDSISLLLTAHGYKPQRSLYALILLFAAATFPAQWAWDEGSFAPNSGPILLSEGWQE LARDDDIQNPAAEWANRNAIPGKDWETFNRYAYAADVVIPIVEFGQTEAWAPSTERGP WGYHLWWLRWGFTTLGWIVTALGAAALTGLIRRD" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 776459..777331 /locus_tag="Silicibacter_762" /function="COG: Purine nucleoside phosphorylase" /gene="mtaP" /transl_table=11 /note="identified by match to putative ortholog SPO3060 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="methylthioadenosine phosphorylase" /translation="MTETLIAVIGGSGIYEIDGLEGAAWTTVETPWGTPSDQILTGRL EGVKMAFLPRHGRGHVHAPSDVPYRANIDALKRLGATDVISVSACGSFREHMAPGDFV IVDQFIDRTFARAKSFFSSGCVAHVALAHPTCPRLSDAVEAAAGAAGINTHRGGTYLA MEGPQFSTLAESKMYREHWGADVIGMTNMPEAKLAREAELCYASVAMVTDYDSWHPDH GEVDVTAVIATLKGNSEKGRALIKGLPARLGAERAPCPHGCDRALEYAIMTAPEKRDP ALLAKLDAVAGRVL" /EC_number="2.4.2.28" CDS 777448..777987 /locus_tag="Silicibacter_763" /function="COG: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins" /gene="apt" /transl_table=11 /note="identified by match to putative ortholog SPO3066 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="adenine phosphoribosyltransferase" /translation="MSTSKTVKDYIRTIVDFPHEGIMFRDVTTLFADPRGFRMAVDQM LHPYAGQRIDKVVGLEARGFILGGAIAHQLGTGFVPVRKKGKLPGATISQEYKLEYGE AVVELHKDAIQPGEKILVVDDLLATGGTAGAGIKLIEKLGGEIISCSFIIDLPELGGR KHLQSLGMDVHVLCEFEGL" /EC_number="2.4.2.7" CDS complement(778083..778175) /locus_tag="Silicibacter_764" /translation="MDAASATSVKDNEAAARLDEADLCRWAFDT" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 778202..778684 /locus_tag="Silicibacter_765" /function="COG: Secreted and surface protein containing fasciclin-like repeats" /translation="MIRKFALSTIASLAVATAAFADGHSKDIVDIASGNDNFDTLVAA VSAADLVDTLKSEGPFTVFAPTDAAFEALPEGTVETLLKPENKDQLIAILTYHVVPGK VMSSDLTDGMKAATVQGSEITIDLDNGAMVDEASVVQADIEAENGVIHVIDKVIMPGS " /product="Transforming growth factor-beta induced protein IG-H3 precursor" /transl_table=11 /note=", Transforming growth factor-beta induced protein IG-H3 precursor (Beta IG-H3) (Kerato-epithelin) (RGD-containing collagen associated protein) (RGD-CAP)., Beta-Ig-H3/fasciclin, Fasciclin domain" /note="High confidence in function and specificity" CDS complement(778792..780387) /locus_tag="Silicibacter_766" /function="COG: FAD/FMN-containing dehydrogenases" /translation="MRAWRSPICRSTGAGAPMCSMRRCATTAGARPPPVRPECSNVAP RHNGLAFGRWILDSWGMTLNPATPAFLDTLSARLPADTLRRPEARHLEEPRGRYAGQA AAVALPRSAEEVAEIIRAAHAARVGVVPYGGGTGLVGGQVMTEGATPILLSLERMRGI RALYPEENVLIAEAGAVLADVQSAAAEAGRLFPLSLAAEGSAQIGGNLATNAGGVNVL RYGNARDLCLGLEAVLPSGEIWHGLSRLRKDNTGYDLRNLLIGAEGTLGVITAAALKL SPIPANAGTAIFTVRDPAAAVALLTRARDAVGEGVSAFELIHRQGLEFLAEKLPELRQ PFESHPEWCVLIELGLGKGQDAEAALADLFEQAMDAELTDDGVIAQSEAQRQALWALR EHIPEANRLIGSVSSHDISVPISRIPEFIPAGWKAIANLDPSLRINCFGHLGDGNLHY NVFPAPGRSRADYEDLRGDVKRIIHDLVYDYGGSMSAEHGIGRLKVGDLERYGDPVKL AAMRAIKEALDPHGIMNPGAVVV" /product="oxidoreductase, FAD-binding" /transl_table=11 /note="identified by match to putative ortholog SPO3067 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(780865..782127) /locus_tag="Silicibacter_767" /function="COG: Predicted Zn-dependent peptidases" /translation="MTVKQDTLPNGFRIVTEYMPGLQSAALGIWVSAGGRHERLEQNG VAHFLEHMAFKGTKRRSALQIAEAIEDVGGYINAYTSREVTAYYARILKDDVDLALDV IGDIVLNSVFDEREIEVERGVILQEIGQALDTPDDIIFDWLQEESYREQAIGRSILGP AERVRSFNKEDLTRFVAEHYGPGQMILSAAGAVDHDRLVKAATEMFGHLEPKQQDVIE CARFTGGEARHDKALEQAHVALAFESPSYRADDIYAAQIYAAALGGGMSSRLFQEVRE KRGLCYTIFAQAGAYEDTGMMTIYAGTSGAQVSDLLGITVDELKRSADDMSDAEVERA RAQMKAGMLMGLESPSNRAERLARLVQIWDRVPSLEDTVAKIDAVTTADVRAMAARIS REAPAALALYGPVAEAPRLEEIARRRAA" /product="peptidase, M16 family" /transl_table=11 /note="identified by match to putative ortholog SPO3070 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(782124..783515) /locus_tag="Silicibacter_768" /function="COG: Threonine synthase" /gene="thrC" /transl_table=11 /note="identified by match to putative ortholog SPO3071 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="threonine synthase" /translation="MKYISTRGQAPELTFEEAMLTGLARDGGLYVPAEIPTLSAEEIA GFAGLPYEEVAFRVMWPYVSGSFSEEEFKGIIARAYAGFEHAARAPLKQMAPNHFLLE LFHGPTLAFKDFAMQLIGQLFQVALKRRGDSVTIVGATSGDTGSAAIEAFRGLDAVNV FIMYPHGRVSEVQRRQMTTPQDANVHALAVDGDFDDCQAAVKDMFNDFDFRDSVHLAG VNSINFARVLAQVVYYFTAAVALGAPHRKVSFTVPTGNFGDIFAGFIARQMGLPIDQL VVATNQNDILHRCLSGEGYFKGETIPSISPSMDIQVSSNFERALFYAYDQDGAAVAQL MDELKTGGGFNVSQGAMQALSEIYSSGRASEEETSATIKSELAASGELLCPHGAVGVK VANEHLKDGVPMVTLATAHPAKFPAAVEAASEVHPPLPPRMADLYDRSERVTRIANDL GAIEDHIRKHIAN" /EC_number="4.2.3.1" CDS complement(783530..784192) /locus_tag="Silicibacter_769" /function="COG: Uncharacterized conserved protein" /translation="MRRVIFLGVVGGLGFVALVSLGLWQLQRLAWKEGVLATIETRIA AEPVSLPEAPDPEADRYRAVRFEGEILPEELHVFWVTEAEGAGYRVISPFVTDEGRRI LVDRGYIRATDKENTRPTGRAELTGNLLWPDEGDWTTPPPEVDTNILYARDIAYMSER LNTEPLLVVVRTGAEKPTPLPVSTKGIPNDHLQYVITWFSLALIWAAMTAAFLLRTRA KT" /product="SURF1 family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3072 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(784344..785159) /locus_tag="Silicibacter_770" /function="COG: Heme/copper-type cytochrome/quinol oxidase, subunit 3" /gene="ctaE" /transl_table=11 /note="identified by match to putative ortholog SPO3073 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="cytochrome c oxidase, subunit III" /translation="MAHAKNHDFHILPPSIWPLLSSLGAFVMLFGAVLWMHDYTAWLF WAGLVAVLYSAFCWWSETIAENKAGDHTPVVLIGLRYGFILFVMSEVMFFFAWFWSFF KHAMYPMEEYVGTEYVAPDIYPVDAFHLPLINTLVLLLSGCAVTWAHHALVHDNDRKG LVNGLAIGIALGIFFTALQAYEYVHLLHEGWEFGGDEFYSNFFMATGFHGFHVILGTI FLIVCLIRAMRGDFTPKSHAGFEMAAWYWHFVDVVWLFLFVAVYIWGTAGLAH" /EC_number="1.9.3.1" CDS complement(785185..785772) /locus_tag="Silicibacter_771" /function="COG: Cytochrome oxidase assembly factor" /gene="ctaG" /translation="MALNGPQKTVVQLVGVVVLMGGLAWASVPFYDWFCRVTGFGGVT QVAETGSDQVLDQTIKVRFDASKDRGMPWEFKPVERIMELKIGETGLAFYEAYNPTDR PVAGQASYNVAPFSAGYYFDKIQCFCFNEQVLQPGERVMMPVTFFVDPEIIEDPEAKY VHTITLSYTFHEIDLPEGYAALDTGDTSGAETELN" /product="cytochrome c oxidase assembly protein CtaG" /transl_table=11 /note="identified by match to putative ortholog SPO3074 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(785777..785938) /locus_tag="Silicibacter_772" /translation="MSLRKEHEIHNRRKGRNVGVGLLLGGFVVLVLALTMVKVTSTGF SFPETQGTE" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(785940..786881) /locus_tag="Silicibacter_773" /function="COG: Polyprenyltransferase (cytochrome oxidase assembly factor)" /gene="cyoE" /transl_table=11 /note="identified by match to putative ortholog SPO3075 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="protoheme IX farnesyltransferase" /translation="MTDASINASMTREEEASLGDYFALLKPRVMSLVVFTAFVGLMAA PIGVHPVIGFCAILFIAIGGGASGALNMWWDADIDQVMKRTKGRPIPAGKVDKGEALS LGLALSGLSVIMLALATNVFAGAFLAFTIFFYVVIYTMWLKRATPQNIVIGGAAGAFP PVIGWIAATGSMSVEPWLMFALTFLWTPPHFWALALFMRNDYDMADVPMLTVTHGRRS TRKHILVYTVILAAFALTTAFTSVGGPIYLTTAVVLNALFLKGAVQIWRRDEEICESD NFKIERSFFKLSLLYLFLHFGAILAEALLKPYGLGGW" /EC_number="2.5.1.-" CDS complement(787000..787914) /locus_tag="Silicibacter_774" /function="COG: Heme/copper-type cytochrome/quinol oxidases, subunit 2" /gene="ctaC" /transl_table=11 /note="identified by match to putative ortholog SPO3076 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="cytochrome c oxidase, subunit II" /translation="MKNALTLSGFIAALSSLPAMAQEGLETIGKPTDGNLGFQPAASE LAEGIHKLDYMILIIITAICVFVGGLLLYAIVRFNRRANPKAASFTHNTPIEIAWTVV PILILIVIGSFSLPELFRQQEIPEGDVTIKVTGYQWYWGYEYVDHDFAFDSYLIGHPA TLDESTRPADADVTPFVYDEAMKLKLEEAGYAGDEFLLATNTAVVVPVNKTIVMQVTA ADVIHSWALPSFGVKQDGIPGRLAELWFKPTKEGVYFGQCSELCGKDHAYMPITVKVV SEEAYQEWLNGAIEEYAGLPQPYDVASK" /EC_number="1.9.3.1" CDS 788095..789516 /locus_tag="Silicibacter_775" /function="COG: Predicted Zn-dependent proteases and their inactivated homologs" /translation="MDTTAFSPFETTLPEDEALPLLRDALAGADDGEIFAERTKSEAL VFDDGRLRTASYDAAEGFGLRAVRGEVAGYAHSTTMSISALRRAAETARLAVGAGGGT MAPAPQATNQKLYGDLDPIAAQAFPVKVETLREIDSFARDLDPRVVQVSATLAASLQE IEILRADGTRVRDVRPMTRVNVSIIVEDGGRRESGTAGGGGRVGLDGLIAPEDWQAKA REALRIALVNLDAEPAPAGELDVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFAGLM GQRIAAPGVTVLDDGTIPDRRGSITVDDEGTPSQKTTLIEDGILVGYMQDRQNARLMG VEPTGNGRRQSYAHAPMPRMTNTYMLGGEATPEDLVKEVKDGIWAVGFGGGQVDITNG KFVFSCTEAYRVKDGKVGAPVKGATLIGDGATALQQIRGLGNDMALDPGMGNCGKQGQ WVPVGVGQPSVLMGGLTVGGSAT" /product="TldD/PmbA family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3077 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 789894..791042 /locus_tag="Silicibacter_776" /function="COG: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake" /translation="MTGEAYSSTHPPLPPTTEDQRYSWLRLLRSRGIGTVTFYRLLAE YGSAQNVLEKLPELAATSGVKGYKIYSKDALDAEFENAKAANARLLCIGDPHYPAPLA SLPNPPPALWAIGNLSLVTRPAIALVGARNASSLGRRMAYGLARDLGDAGYVVVSGLA RGIDACAHEGALASGTIAVQGGGVDIIYPSENTPLAMTLAEQGLRLSEQPMGLQPQAR HFPPRNRIIAGLALATVVVEAAIKSGSLITARDALDLGRDVMAVPGHPCDGRASGGNL LIRDGATLVRHAEDVIEALPPLNAHRPPQRPSVQDLPSPPPERRNLRQTAALHQQILD RLAAAPTPEGQLIKDLGSPARKVRTVLTDLELSGEIGREPGGVIIKKR" /product="DNA processing protein DprA, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3078 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 791183..793864 /locus_tag="Silicibacter_777" /function="COG: Topoisomerase IA" /gene="topA" /transl_table=11 /note="identified by match to putative ortholog SPO3079 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="DNA topoisomerase I" /translation="MPVVVVESPAKAKTINKYLGSDYTVLASYGHVRDLPAKNGSVDP EDDFAMTWEVGNDSKKHVRAIAEALKDDNALILATDPDREGEAISWHLQEALTKRRSI KKDTDVKRVTFNAITKDAVAEAMKNPRDVDMPLVEAYLARRALDYLVGFNLSPVLWRK LPGARSAGRVQSVCLRLIVEREMEIEAFNPQEYWSVRANLATPRGQSFEARLTVLGGE KLDKFSLANSTAAELAVQAVSSRKMSVLSVEAKPAARNPSAPFMTSTLQQEASRKFGM GAKQCMNAAQRLYEAGLITYMRTDGIDMAPEAVSAARDEIAKRYGQEYVPGEPRIYKN KAKNAQEAHECIRPTDMSRDAASLKVSEDDQRKLYDLIWKRTLACQMAGARLERTTVD IGSDDKQVVLRATGQVVMFDGFMRVYEEGRDDVVDEDDKRLPQIMQGEALKFAGSLAA QAEKAGKDGSVLSQDGATLALQHHTQPPPRYTEATLVKRMEELGIGRPSTYASVITTI QDREYVRKDKNRLFPEDKGRIVTIFLLNFFKRYVEYDFTAALENQLDDVSAGGKDYKE LLDSFWRDFSAAISETSDLRISEVLDVLDEALAPQLYPPREDGGDPRICPKCGAGQLH LKTSRTGGFVGCGNYPECNYTRPISGEGAEGYERVLGEDDGDEIHLKSGRFGPYVQRG EATPENKKPPRSSLPKQGKDYLPGWGPNEITLEQAVTLLTLPREIGAHPEGGVVSSNL GRFGPYIMHQRPDEEKPVYVNLKETLDVFEIGMNRAVEMLAEKRANPGRGRSAAAKPL RELGEHPDDKAPVNIMDGRYGPYVKWGKVNATLPKDTEAKDVTMEMAVELLNEKAAKS GKKKAPAKKAAAKKTTAKKTTAKKAPAKKKEAKASGD" /EC_number="5.99.1.2" CDS 794149..794853 /locus_tag="Silicibacter_778" /function="COG: Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit" /gene="dxnG" /transl_table=11 /note="identified by match to putative ortholog SPO3082 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="3-oxoadipate CoA-succinyl transferase, alpha subunit" /translation="MKKVYGSAAEALDGVLFDGMTIAAGGFGLCGIPELLLEAIKDAG TKDLTFASNNAGVDDFGIGILLQTKQVKKMMSSYVGENAEFMRQYLSGELELEFNPQG TLAERMRAGGCGIPGFYTKTGVGTQIAEGKEVKVFDGEEYILERGIFADLSIVKAWKA DETGNLVFRKTARNFNPPAAMCGKICVVEVEEIVPTGSLDPDHIHLPGVYVHRLIQGE HEKRIEKVTTRPREEA" /EC_number="2.8.3.6" CDS 794857..795483 /locus_tag="Silicibacter_779" /function="COG: Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit" /gene="dxnH" /transl_table=11 /note="identified by match to putative ortholog SPO3083 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="3-oxoadipate CoA-succinyl transferase, beta subunit" /translation="MAWDRNQMAARAAQELEDGMYVNLGIGIPTLVANYVGDKDITLQ SENGMLGMGPFPFEGEEDPDLINAGKQTITELRRTAYFDSATSFGMIRGGKIAAAILG AMEVAENGDLANWMIPGKLVKGMGGAMDLVAGVGRVIVVMDHANKHGESKLLKECTLP LTGKGVVDRIITNLGVLDVVEGGLKIVEVAEGVTEDELRAATEATIVN" /EC_number="2.8.3.6" CDS complement(795807..796532) /locus_tag="Silicibacter_780" /function="COG: Putative threonine efflux protein" /translation="MRHSRGAKGACNFTTRGYLERHAPRASHVVFRGTAALISLQFLL TAFVVVLAPGTGVIYTLALGLGRGRRAALWAAVGCTFGILPHLMAATLGLAAVLHSSA VLFQGIKIAGVLYLLYLAWQMLKSDGALSVSAAQPASQPGITIAKRGALINILNPKLS IFFLALLPPFLSGNTATATQEMVALGGIFMAMTFAVFALYGLFAAQARSLILGSERVV TWLNRSFAAIFAALALRLAMERS" /product="transporter, LysE family" /transl_table=11 /note="identified by match to putative ortholog SPO3209 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(796590..797540) /locus_tag="Silicibacter_781" /function="COG: Penicillin tolerance protein" /gene="ispH" /transl_table=11 /note="identified by match to putative ortholog SPO3207 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="4-hydroxy-3-methylbut-2-enyl diphosphate reductase" /translation="MAAKPPLTLYLAAPRGFCAGVDRAIKIVEMALEKWGAPVYVRHE IVHNKFVVDGLRDKGAVFVEELEECPDDRPVIFSAHGVPKSVPAAAEARQMVYVDATC PLVSKVHIEAQRHAEAGLQMIMIGHKGHPETVGTMGQLPEGEVLLVETVEDVAQVEVR DPERLAFVTQTTLSVDDTKDIVAALQARFPAIVGPHKEDICYATTNRQEAVKEVAPKA DALLVVGAPNSSNSRRLVEVGAKNGCSYAQLVQRAENIDWRALEGIQSIAITAGASAP ELLVNEVIDAFRDRYEVTVELVETAVERVEFKVPRVLRTA" /EC_number="1.17.1.2" CDS complement(797710..798279) /locus_tag="Silicibacter_782" /function="COG: Uncharacterized conserved protein" /translation="MFYKDERLALFIDGSNLYASAKALGFDIDYKLLRQEFMRRGKLV RAFYYTALLENDEYSPIRPLVDWLHYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELTV DAMELAPRVDHIVLFSGDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADN FIELEELRDVIGRPPREVPSEPRAVPAED" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3206 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 798415..798984 /locus_tag="Silicibacter_783" /function="COG: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase" /gene="folK" /transl_table=11 /note=", [EC:2.7.6.3] , Folic acid synthesis protein [Includes: Dihydroneopterin aldolase (EC 4.1.2.25) (DHNA) (FASA); FASB; Dihydropteroate synthase (EC 2.5.1.15) (DHPS) (Dihydropteroate pyrophosphorylase) (FASC); 2- amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) (FASC)]., 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK), folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase" /note="High confidence in function and specificity" /product="2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase" /translation="MAENRSTYLVAMGSNLEDEGTIPLEILQMCLAELSGEGFDLVAV SRFYATPCFPAGAGPDYVNAAIVLRGAFSADETLRRLHKIETKFHRRRQQRWGMRTLD LDLLAVDQEIAPDIQTFSHWHSLPQSEQRTKAPEHLILPHPRVQDRAFVLVPLRDIAP DWVHPVLELSVREMLKRCPASDVAEVRAL" /EC_number="2.7.6.3" CDS 799099..799452 /locus_tag="Silicibacter_784" /gene="rpoZ" /translation="MARVTVEDCVDKVPNRFELVMLAAHRAREISAGAELTVDRDNDK NPVVSLREIAEETQSADALRERLIESNQSQIEVDEPEEDSMALLMGGEADKPQEDDMS EEKLLRALMEAQGQG" /product="DNA-directed RNA polymerase, omega subunit" /transl_table=11 /EC_number="2.7.7.6" /note="identified by match to putative ortholog SPO3204 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 799491..801623 /locus_tag="Silicibacter_785" /function="COG: Guanosine polyphosphate pyrophosphohydrolases/synthetases" /gene="relA" /transl_table=11 /note="[EC:3.1.7.2] , Probable GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP 3'- pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase)., RelA/SpoT protein, Region found in RelA / SpoT proteins, spoT_relA: RelA/SpoT family protein, , belas" /note="High confidence in function and specificity" /product="GTP pyrophosphokinase" /translation="MTSADDLISLVRDYNPKTNEQRLRDAYAFGEEMHDGQFRHSGEP YFTHPVAVAAILTEQRLDDATIITALLHDTIEDTKASYEEVSLRFGEEVAMLVDGVTK LTNLQLSSRETKQAENFRKLFMAMSKDLRVILVKLADRLHNMRTIRAMRPEKQAQKAR ETMDIYAPLAGRMGMQWMREELEDLAFKVLNPEGRQSIIRRFVTLQRETGDVIHRITG DMRLELEKAGVEAEVFGRAKKPYSIWRKMQEKDQGFSRLSDIYGFRVITRSEEDCYRT LGTIHQRWRAVPGRFKDYISQPKSNGYRSIHTTVSGRDGKRVEVQIRTRQMHDVAESG VAAHWSYRDGVRTENPFAVDPAKWIASLTEQFDGEDDHDEFLEAVKLEMYSDQVFCFT PKGDVIKLPKGATPIDFAYAIHTRIGHACVGAKVDGIRVPLWTRLRNGQSVEVITAEG QTPQVSWLEIATTGKARTAIRRALREADRERFVKLGHELARSAFEHMNKKATDKALET AARALRVSDVTELLARLGAAVITAHDVVQAVYPELTDKDGEEVSPRRAVIGLEPGQKF ERASCCEPLPGERIIGITSRGQGVVVHSADCDRLGEFEDQMDRWVDVHWHSGTHPAVY GVTLELTIGNDAGVLGRICTLIGEKKANISNLEFKDRKPDFYRLMINVELRDVEQLHS LILMLEAESDVAAVARYRETPGTQARTI" /EC_number="3.1.7.2" CDS 801654..802358 /locus_tag="Silicibacter_786" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MVFRRRDRRPPLRAAAEFLWPRGGWGRAFLYVKHRIRRLPDHPE RIARGIWAGLFTTFTPFYGVHFIVAATIARVMNGNMLAALSATFFGNPLTYVPIGVIS LQTGHWLLGSQPVAEVDDTLADKFLAAGWDLWYNVYAVATGTPVDWTGLKVFYDEVFY PYMIGGIIPGIIVATVGYMLSVPVIRTYQQRRRRKIKAKFDAIKKRAELEAVNSPHPP RGTQPPNRTPKIGRTE" /product="hypothetical protein" /transl_table=11 /note="Hypothetical protein" CDS 802479..803237 /locus_tag="Silicibacter_787" /function="COG: Pyridoxal phosphate biosynthesis protein" /gene="pdxJ" /translation="MSTNTLRLGVNIDHVATVRNARGGAYPDPIRAAKLAEEAGADGI TAHLREDRRHIVDADIDGLMAALTVPLNFEMAATEEMQKIALRHKPHAVCIVPEKREE RTTEGGLDVVRDESRLAACIAPLREAGSRVSIFIAADQKQIEAAHRIGAEVIELHTGA YCDHHAEGDFAARDAELAALGEMATYAHSLGLEVHAGHGLTYETVAPIAAFPEVRELN IGHFLIGEAIFRGLSPAIGEMRRLMDAARSGADA" /product="pyridoxal phosphate biosynthetic protein PdxJ" /transl_table=11 /note="identified by match to putative ortholog SPO3201 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 803234..803659 /locus_tag="Silicibacter_788" /translation="MKLGRFAIVYLGIMVALMVLILLVQAIFRFDISNAGMAIIPAMG AAMVEGQAFAKAQERMPEPAEMWGFARRAGIVILGLTLLSTAAFSIAVPEIKHILSQP QGTMFLLVAVLFQAMISFLLVRFFLATGAKSMLRAQKRP" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 803686..804114 /locus_tag="Silicibacter_789" /function="COG: Phosphopantetheinyl transferase (holo-ACP synthase)" /gene="acpS" /transl_table=11 /note="identified by match to putative ortholog SPO3200 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="holo-(acyl-carrier-protein) synthase" /translation="MILGIGTDLANIERIQGVLDRFGDRFRNRVFTDVEQAKSERRLD VAGTYAKRWAAKEACSKALGTGLRMGIAWKDMSVSNLSTGQPVMHVTGWAKARLDELT PPGHEAVIHVTLTDDHPWAQAVVMIEARPILPDVQTAQTT" /EC_number="2.7.8.7" CDS 804259..805095 /locus_tag="Silicibacter_790" /function="COG: Signal peptidase I" /gene="lepB" /transl_table=11 /note="identified by match to putative ortholog SPO3199 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="signal peptidase I" /translation="MASKTKSGNSIVETIKTIVYALLIAGVFRTLFFQPFWIPSGSMK ETLLIGDFLFVNKMVYGYSYASCPNIRLNSIGINIDAKDICGFVDGDNTRIFGGEPER GDVVVFRHPVNGTDYIKRLVGLPGDKLQMRDGVLHINGAAVGLMDDGEFEEAMERQGP QGRFPRCENDPVGQGGVCKKSRQIETLPGGTSHAIINIGNQASDHTKVYHVPDGHFFF MGDNRDNSTDSRVSKAVGGVGYVPFENLIGRADRIMFSSAGRSMLFFWTWRGDRFFKG IT" /EC_number="3.4.21.89" CDS 805197..805991 /locus_tag="Silicibacter_791" /function="COG: dsRNA-specific ribonuclease" /gene="rnc" /transl_table=11 /note=", [EC:3.1.26.3], Ribonuclease III, bacterial, RNase3 domain, RNaseIII: ribonuclease III" /note="High confidence in function and specificity" /product="ribonuclease III" /translation="MVAQSAFLWRRAGIWNEATGAIVPSNCALKLFKGPHVKLSRDIL AFQARLGHEFSSPELLIRALTHPSVSSPNRQDNQRLEFLGDRVLGLVMATALLEHDKD ATEGQLAPRFNALVRKETCADVARQIDLGAVLKLGRSEMLSGGRRKQALLGDAMEAVI AAVYRDAGFEAAQSVILRLWGKRVGTVEEDARDPKTALQEFVQARRQPPPAYVLVARK GPDHEPIFTIAARLEDGTEEQATAGSKRLAEQAAAKALLAKLEQQT" /EC_number="3.1.26.3" CDS 805988..806893 /locus_tag="Silicibacter_792" /function="COG: GTPase" /gene="era" /translation="MTTRAGFIALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARI RGVAMEGDSQLVFVDTPGLFQPRRRLDRAMVAAAWGGAADADVIVMLIEAHRGVTEGV ERILENLGEVAEGRRVALAINKIDKVQSDVLLGLTKDLNDRFPFAETFMISAEKGYGT EDLRQWLAAEVPEGPWLYPEDQIADLPLRMIAAEMTREKLTLRLHQELPYQLTVETEK WEERKDGSARIDQVVYVVRDGHKGIVLGKRGETIKAVGQAARAELEEFLDRKIHLFLQ VKVRPNWLEESERYSEMGLEFKDGN" /product="GTP-binding protein Era" /transl_table=11 /note="identified by match to putative ortholog SPO0691 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 807058..807387 /locus_tag="Silicibacter_793" /translation="MSRLTARFWVDAYLARLRFQDIPAFVTAHGDDTAGAVLVKLNTL DGQARAYQRSFDLMTGDRKWVELVAGADGDVEASIAKQRQFDSDLWVIEVEDRQGRHL LDEPGLD" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0690 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 807391..808116 /locus_tag="Silicibacter_794" /function="COG: Recombinational DNA repair protein (RecF pathway)" /translation="MDWRDQGILLTVRRHGESSALIEVFTEDHGLHAGLVRGGASRKM APHLQPGAQLDLTWSARLEDHLGTYKAEPLRSRAGMALSGRLALAGLNAVCALLAFAL PDRAPYPALYHRSSALLDLLDSEDLWPLAYLRWELSLLEDLGYGLDLSACAATGVTQD LRYVSPKTGRAVSGAAAGEWADRLLPLPPVMRGEGAAEDIEILTALRTTGFFLESKLA PALGNRPIPEARGRFLDALARRV" /product="DNA repair protein RecO, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3196 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 808264..810147 /locus_tag="Silicibacter_795" /translation="MVEKSLIDLSWDDFDEHRSPRPDQNQFDAVVERAVSRRGFLGGA LAFGSGAAVFGTGLISSTTASRAHAHAKFAFTPIGIATDHAVHVPEGYKSQVLVRWGD ALWSDAEGAYSADTGISLAMSDKVFGENTDGMELFEVDGREILVVNSEYVNPKINLPA SSEGVPQDADEVQLLKNLQGVTVMEIARGATGYQVVKDSPYNRRITHETEMTLAGPLA GDELVKTDADPSGRRVKGTMNNCGSGKTLWGTYLTCEENFNGYFGATGEMPEGEGYIR YGIGGEGRYAYEKYDDRYDISKEPKEPHRHGFVTEINPSDATSVPVKRTALGRFKHEN AEMVHAADGRIVVYMGDDERGEYLYKYVSTNTWTEGAPTEGLLDDGQLYAAKFNDDQT GEWLALTPEATGMSEAEILCFTRMAASAVGATTMDRPEWVACNPLKAEGYCALTNNKN RGVKPNAGGDDASVNGPNPRETNKYGQIVRWAPSEDNHAAEGFTWDLYVMAGNPTVYD NAYAGSANVNAGNMFNSPDGMAFSSDGMLWIQTDGDDDNEGDFAGQGNNQMLVGDPES GEIARFMTVPNGAEVTGLCWSLDKTVAFVGVQHPGGAWPDGAGKPRSSIVAVWREDGA MIG" /product="twin-arginine translocation pathway signal sequence domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1860 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(810201..811031) /locus_tag="Silicibacter_796" /function="COG: Prephenate dehydratase" /translation="MTQKIAIQGELGSYSHEACRNKRPDMEVLPCRGFEDAINAVRSG EAELAMLPVENTTYGRVADIHRLLPHSGLKIIDEAFVRVHINLLGVPGATLDDIKEAH SHLVLLPQCATFLRQHQIQGRVSPDNARAAREVAERGEITHAALASELAGEIYGLNVL ARHIEDQGNNTTRFLTMAREADTSRRGDNGMITSFVFQVRNIPAALYKAMGGFATNGV NMTKLESYMVNGSFTATQFYADIDGHPEDENVRLAMDELSYFTTDVEILGVYPADRKR " /product="prephenate dehydratase" /transl_table=11 /EC_number="4.2.1.51" /note="identified by match to putative ortholog SPO3539 from Silicibacter pomeroyi DSS-3, Prephenate dehydratase, shikimate pathway, belas" /note="High confidence in function and specificity" CDS 811152..811652 /locus_tag="Silicibacter_797" /function="COG: Cytochrome c2" /gene="cycM" /translation="MFDTMTLTKATAGFCGAFLVFLLGKWVAEELYHVEAHGEASYVI EVADAGGASDEPEVDFATLMASADVDKGAKVFRKCSACHKLDGTDATGPHLDGVVGRD IAASAGFGYSGALTALEGAWTPEALNEFLLKPSDYASGTTMSFAGLKKVEDRVNLIAY LQTTAN" /product="cytochrome c552" /transl_table=11 /note="identified by match to putative ortholog SPO3538 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 811906..813846 /locus_tag="Silicibacter_798" /function="COG: ABC-type oligopeptide transport system, periplasmic component" /translation="MTIRRATATATGTAKARTRSWLKPFAGAVLMSTAALMTSALAVK STESEAITVSHGYSFYGDLDYPADFEHFDYVNPDAPKGGELAIPFIGTLDSMNPYSGK GRAHAFSVYPYESLLSDAAPADKYGQSYCLLCETVEYPEDKSWVIFRMRPEARFSDGT PVTAHDIAFSHNLLLDQGLKSYADFIRRLIPKVEVIDDHTIKFYFADGVSRRSLIEQV GGVPAWSKKWFDETGQKLNENWIEGPPGSGPYVIEEIDLSRRIVLKRNPDYWGKDLPV NQGRHNFDSLRVEIFADDTAAFEAFKAGEYTFRAEGDSKKWASGYDFPKVDSGAVKLE ELPNGAPPASSGIVFNLASPELQDRRVREALALAFNFEWSNESLLYGLFDRRASFTQN SPLMAKGVPEGAERAFLQSLGDLVPDEMLTEEVYIPPTSDPSRLFDRRNARKAAALLD AAGYTVGDGGMRMSPDGSAFELDFLFSSSSSPTTRGVMENFVDNLENLGVQVNFEVVD TAQYTSRERDRDYDLVVDSYTTFLGTGTGLEQRFGSEAAAFSLFNPAGLASPLVDEII TRSLHAETREEETTVMTALDRALRHEFIMIPLWYNPNHWAAYYDQYEHPAEIPPYSLG YLDFWWYNEDKAKALRDAGALR" /product="Hypothetical protein Y4WM precursor." /transl_table=11 /note=", Bacterial extracellular solute-binding protein, family 5, Bacterial extracellular solute-binding proteins, family 5 Middle" /note="Conserved hypothetical protein" CDS 813854..814942 /locus_tag="Silicibacter_799" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /gene="yejB" /translation="MLNYILRRLLLVIPTLIGIMVVNFALVQFVPGGPVEQMIARLEG GGDVFGGFAGAANDAGAETVGQAESQYAGARGLPPEFIEELEREFGFDKPPLERFLNM MWNYVRLDFGESYFRNIGVIDLVLEKMPVSISLGLWSTLIAYLISIPLGVKKALRDGS SFDSWTSGVIIAAYAIPGFLFAILLLVLLAGGSYWQIFPLRGLTSENWEELSLLGKIG DYFWHITLPVVASTISAFATLTLLTKNSFLDEIKKQYVMTARAKGLTENRVLYGHVFR NAMLIVIAGFPGVFISIFFTGSLIIETIFSLDGLGRLGFEAAVARDYPIVFGTLFIFG LMGLVVGILSDIMYVLVDPRIDFEKREG" /product="oligopeptide/dipeptide uptake family ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO3536 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 814947..816053 /locus_tag="Silicibacter_800" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /gene="yejE" /translation="MALSPLNQRRWNNFKRNRRALWSLRIFLVLFGLSLFADVLANDK PILVNYRGDYYTPVWNFYPETTFGGDFQTEAVYRDPEVKCLIASGGSLDCFDDPEGIM AAIDSGTYAAEDFVEGWSLWPPIPYRFDTPVDRAGAAPLPPNGQNWLGTDDTKRDVLA RVIYGFRLSILFTLIVTLAASLIGIVAGAVQGFFGGWVDLIFQRVIEIWSATPSLYVI IIMFAILGRSFWLLVFLMILFSWTALVGVVRAEFLRARNLEYVRAAKALGVGNVTIMF RHMLPNAMVATLTMLPFIVTGTIGTLASLDFLGFGLPSSAPSLGEMTLQAKQNLQAPW LAFTAFFTFAIMLSLLVFIFEGVRDAFDPRKTFS" /product="oligopeptide/dipeptide uptake family ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO3535 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 816109..817701 /locus_tag="Silicibacter_801" /function="COG: ATPase components of various ABC-type transport systems, contain duplicated ATPase" /gene="yejF" /translation="MTQAPILQVKDLRVAFRQDGQRVEAVKGVSFALSRGETVALVGE SGSGKSVSALSTVQLLGDSAEVSGSVNYDGQEMIGADERTLRRVRGNDISFIFQEPMT SLNPLHTIEKQLGEALALHQGVMGEDARARVLDLLNKVGIRDAETRLGAYPHQLSGGQ RQRVMIAMALANKPDVLIADEPTTALDVTIQAQILDLLADLKQSEGMGLLFITHDLSI VRRIADRVCVMKSGEIVEEGPTAELFANPQHPYTQKLLAAEPSGRPAPIPEGATEFVS AKDLKVWFPIQRGLLKRMVGHVKAVNPMSLSVRAGETLGIVGESGSGKTTMALAIMRL IASEGEVRFQDQDLRQWSTRDLRRLRKDMQIVFQDPFGSLSPRMTCQQIIAEGLAIHE VDQHRKPRDLVADVMQEVGLDPATMDRYPHEFSGGQRQRIAIARAMVLRPKLVVLDEP TSALDMTVQVQIVNLLRDLQARYGLAYLFISHDLNVVRAMSHDILVMKAGDVIEQGPA EEVFANPKEEYTRHLLSAVTGA" /product="oligopeptide/dipeptide uptake family ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3534 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(817792..819147) /locus_tag="Silicibacter_802" /function="COG: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases" /gene="hemN" /transl_table=11 /note="identified by match to putative ortholog SPO3532 from Silicibacter pomeroyi DSS-3 Gonzalez" /note="High confidence in function and specificity" /product="oxygen-independent coproporphyrinogen III oxidase" /translation="MTQESQLARLGLFDAKVPRYTSYPTAPHFNNDVSAARFASWIGS IKPGAEISLYVHVPFCRRLCWFCACRTQGTQSESPVRAYIEVLKQELALLARALPEGV RLARLHWGGGTPTLLSAEMISDLAEAIFAVTPMAKGGEFSVEIDPNEIDDARLDALAA AGMNRASIGVQDFDPQIQETIGRIQPFDLTRDAVDMIRARGITSLNADILFGLPHQNR MRMTESVQKLLSLSPDRVALYGYAHVPWMARRQNMIPTDSLPSPQTRLQLFETAQRLF QWDGYREIGIDHFATPHDGLAVAARTGRLRRNFQGYTDDRADVLIGLGASSISRFPQG YAQNAPSTSAYTKAIRDGQFSTARGHVFSGEDLLRGRMIEALMCDFEIATDDIRAQFD ITQDALERMYREASVAFPEMLDVTPSGLRVRPEGKPLTRMVARHFDAYDLSKAGHSSA I" /EC_number="1.-.-.-" CDS 819208..819948 /locus_tag="Silicibacter_803" /function="anaerobic regulator FnrL" /gene="fnrL" /translation="MSLAQFQSVECADCPIRHRAVCARCDADELEALDAIKFYRSYEA GQTVVWSGDQMNFVGSVVSGIATLTQTMEDGRTQMVGLLLPSDFVGRPGREGSAYDVV ATTDVIMCCFRKKPFEDLMVRTPHIAHRLLEMTLDELDAAREWMLVLGRKTAREKIAS LLSIIARRDASLAVDPSNGAVSFDLKLTREAMADYLGLTLETVSRQISALKKAGVIQL EGKRHVTVPDMHRLIEEAGDDSDGGVLG" /product="transcriptional activator protein FnrL" /transl_table=11 /note="identified by match to putative ortholog SPO3531 from Silicibacter pomeroyi DSS-3 Gonzalez" /note="Conserved hypothetical protein" CDS complement(820126..820965) /locus_tag="Silicibacter_804" /function="COG: Universal stress protein UspA and related nucleotide-binding proteins" /translation="MTYKTILTVRSAPDGSTTALDQAEAMVRRANGHLDVLCLGVDRT RVGYYDGGANAIAINTLLDRAREEVQATEAHTEQHLAGSDVPRAISTAIAPFGDISRI TSHHARFSDLVVMDLPYSKGQGPEVEPIVEAALFDTRTPVLVMPEGTELAASPKTVLV AWDESIEALTAVRKALPLLQAADLVRITIIDPPKHGIERSDPGGMLCQMLARHGVACE IDVLSKTLPRISDVLCRHATDTEAELIVMGAYGHSRFRESILGGATRNMLEHAKVPVL MAH" /product="universal stress protein family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3527 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 821189..822793 /locus_tag="Silicibacter_805" /function="COG: Cbb3-type cytochrome oxidase, subunit 1" /gene="ccoN" /transl_table=11 /note="identified by match to putative ortholog SPO3526 from Silicibacter pomeroyi DSS-3 Gonzalez" /note="High confidence in function and specificity" /product="cytochrome c oxidase, cbb3-type, subunit I" /translation="MSNYLKLIVLGVLTVFFMIAAGYARDLAYQVHAVILMLVAGGLF LWTLRETDEPVPAPVTGEYLDGVVRAGVIATAFWGVAGFLVGTFIAFQLAFPVLNFDW SEGFANFGRLRPLHTSAVIFAFGGNALIATSFYIVQRTSAARLWGGNLAWFVFWGYQL FIVLAATGYLLGGTQSKEYAEPEWYIDLWLTVVWVAYLAVFLGTIIRRKERHIYVANW FFLAFIVTVAMLHLVNNLTIPVSIWGSKSVIVWPGVQDAMVQWWYGHNAVGFFLTAGF LGMMYYFIPKQADRPVYSYKLSIIHFWALIFIYIWAGPHHLHYTALPDWASTLGMVFS IVLWMPSWGGMINGLMTLSGAWDKLRTDPVLRMLVISVGFYGMSTFEGPMMSIRAVNS LSHYTDWTIGHVHSGALGWNGMITFGALYYLTPVLWKRERLYSLSLVSWHFWLATIGI VLYAASMWVTGIMEGLMWREVDANGFLVWSFADTVAAKLPMYVMRGLGGVLFLTGSLV MCYNLWMTVRRAPAKEASLSVAVPAE" /EC_number="1.9.3.1" CDS 822808..823536 /locus_tag="Silicibacter_806" /function="cbb3-type cytochrome oxidase, cytochrome c subunit" /gene="ccoO" /transl_table=11 /note="identified by match to putative ortholog SPO3525 from Silicibacter pomeroyi DSS-3 Gonzalez" /note="High confidence in function and specificity" /product="cytochrome c oxidase, cbb3-type, subunit II" /translation="MAILDKHKILETNATLLLICSFLVVTIGGLVQITPLFYLENTIE EVEGMRPYTPLELAGREIYIREGCYVCHSQMIRPMRDEVERYGHYSLAAESMYDHPHQ WGSKRTGPDLARVGGRYSDEWHVDHLRDPQAVVPESVMPKYDFLERTRIDGKYIGELM ATNAIVGVPYTEAMIEEARRDFRAQADPDSDYDGLLERYGESVNVRNFDGQPGVSEAD ALIAYLQMLGTLVDFSTFTPDASR" /EC_number="1.9.3.1" CDS 823551..823748 /locus_tag="Silicibacter_807" /function="cbb3-type cytochrome oxidase, cytochrome c subunit" /gene="ccoQ" /transl_table=11 /note="identified by match to putative ortholog SPO3524 from Silicibacter pomeroyi DSS-3 Gonzalez" /note="Hypothetical protein" /product="cytochrome c oxidase, cbb3-type, subunit IV" /translation="METYSLLREFADSWMLLFLFLFFIGVVIWAFRPGSTKTYEDTAN IPFRNADKPASERAAQPEAQQ" /EC_number="1.9.3.1" CDS 823745..824629 /locus_tag="Silicibacter_808" /function="cbb3-type cytochrome oxidase, cytochrome c subunit" /gene="ccoP" /transl_table=11 /note="identified by match to putative ortholog SPO3523 from Silicibacter pomeroyi DSS-3 Gonzalez" /note="High confidence in function and specificity" /product="cytochrome c oxidase, cbb3-type, subunit III" /translation="MSETGNKKTVKIHEGDPNTTGHEWDGIMEFDNPMPRWWLWVFYA TIIWGIGYTIAYPAWPMVSAATSGITGWSSRGQVEAEIAAVDEANAPINAQLEALELA AIPGHPELEGYAVSAGAAVFKTWCAQCHGSGAAGAKGYPNLLDDDWLWGGTMEDIHAT VSYGIRNEESDDARYSAMPAFGRDELLQKEEVSQVVNYVMSLSDTPKDASEVAAGAVV FEENCASCHGADASGDIYQGAPNLKDAIWLYGGDYDTLYETVWNSRFGVMPNWDSRLS EAEIRAVSAYVHQLGGGE" /EC_number="1.9.3.1" CDS 825306..826190 /locus_tag="Silicibacter_809" /function="COG: Transcriptional regulator" /gene="gcvA" /translation="MNWRDMPPLSALRAFAAFAETGNLQQAGEQLNVSHAAISQQLRH LETHMGVPLLDRSGRSLRLTSEGEQLAQALALGFGAIRSAVQDLTSRGAGQPLHVTCT PMFATHWLMPRLAGFRQAYPDVDLVIDPTGEVVRLAPGGIDIALRYGTGTWPGLEAEM LLASPMVVVAAPGLLDKRAVTTPEDLLDLPWLEEIGTNEASVWLRSRGVQDGVKAGRV VLPGNLLMEALRAGQGVAVSVREFVALDVAAGRLTELFCEEKGRGYHIVHRPCLLRPG ARHFVNWLRRERDSTPLI" /product="HTH-type transcriptional activator ampR." /transl_table=11 /note=", LysR, substrate-binding, LysR substrate binding domain" /note="Conserved hypothetical protein" CDS 826338..827768 /locus_tag="Silicibacter_810" /function="COG: Polyferredoxin" /gene="rdxB" /translation="MSDSSQTPSLYAAREPIFPRRVSGKFRTLKWVIMAVTLGIYYLL PWIRWDRGPELPDQAVLLDLAGRRFYFFWIEIWPHEFYFVAGLLIMAGLGLFLFTSAL GRVWCGYACPQTVWTDLFILVERWIEGDRNARLRLHRQKKWDFKKVRLRVTKWVAWLL IGLATGGAWVFYFADAPTLLQDLVTGQAHPVAYTTMAILTFTTFFFGGFAREQICIYA CPWPRIQAAMMDEDTLTVGYRDWRGEPRGKHRKSAEAEQLGDCIDCMACVNVCPMGID IRDGQQMECITCALCIDACDDIMAKVGKPRGLIDYMALSDETQERAGKPPRPVWKHIL RPRTIMYTTLWGGVGLALVFALFIRADINMTVAPVRNPTYVTLSDGTIRNTYDVRLSN KNGEARIFEMSIVGDPTLSVTLEGEEGTKVEVPADSAELQRVYVSAPRDSAPAEAENT GLRLWVEDLTSGERAYRDTTFNGRGN" /product="iron-sulfur-binding protein, RdxA/RdxB/FixG family" /transl_table=11 /note="identified by match to putative ortholog SPO3522 from Silicibacter pomeroyi DSS-3 Gonzalez" /note="Conserved hypothetical protein" CDS 827772..828248 /locus_tag="Silicibacter_811" /function="RbxH protein" /gene="rbxH" /translation="MHSETTKAPRQFTGKHMLAVCVGAFGIIISVNLYMAYSAVSTFP GVEVKNSYVASQQFDTRRAAQEALGWSVYASAIGNEVKLEISDRDGQPVEVASLTATL GRATHVRDDQKPQFRFDGSAYVAPAELAPGNWNIRMIARAEDGTEFTQRVILHVKD" /product="RbxH protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3521 from Silicibacter pomeroyi DSS-3 Gonzalez" /note="Conserved hypothetical protein" CDS 828327..830510 /locus_tag="Silicibacter_812" /function="COG: Cation transport ATPase" /gene="rdxI" /transl_table=11 /note="identified by match to putative ortholog SPO3520 from Silicibacter pomeroyi DSS-3 Gonzalez" /note="High confidence in function and specificity" /product="copper-translocating P-type ATPase" /translation="MTAQMHHQTAVCPGCAAAPTEAIAQAPTEARLAISLPTIHCQAC ISAVERGLSQVPGVRSARVNLTLKRALVEAEPEMRAADLVPICASLGYEAHELDLAAL AATETDRAGRELLLRLAVAGFASMNVMLLSISVWSGASDATRDMFHWISAAITFPAIV YSGHPFFKNAWQALRARRLNMDVPIVLALLLALLTSLWETTLSGEHAYFDAALTLTFF LLAGRYLDHRTRAAARSAAEELAALEVPRAWRLDKQGQEVEVSVADLTIGDLIRVRPG GRMPVDGEITEGRSELDRSLLTGETLPVLAEPGGLVSAGEVNLTGPLTIRATAVGAET SLHRMADLVAIAESGRSRYTSLADSAAKLYAPGVHILSALAFVGWYLYTCDLRTALNI AAAVLIITCPCALGLAVPAVTTAASGRLFRAGLLVKHATALERLAEVDTVVFDKTGTL TEGAPEVVNLDTLSPKERSVALALASGSSHPLAIALSRAARDAGAEPAVLEDLREVPG YGTEARLNGQPVRLGRAAWVGARGTQEQTATWLDLGEGAPVAICFKDALRAGAEEVVR ALQGAGKDVLLISGDTTAAVEDLAKRLGIQSWVAEALPEDKAARIAELTQTGRKVLMV GDGLNDTAALAGAHVSISPASALDAARVASDIVLLGKDLAPIAEACGVAERATRRIRE NFQIATLYNVIAVPLAIAGLATPLIAALAMSTSSITVSLNALRLR" /EC_number="3.6.3.4" CDS 830529..830687 /locus_tag="Silicibacter_813" /gene="rdxS" /translation="MTVLSYLIPISLILGGAGLIGFIYTVRSEQYDDPEGDARRILSD EWDDHPKP" /product="cytochrome oxidase maturation protein, cbb3-type" /transl_table=11 /note="identified by match to putative ortholog SPO3519 from Silicibacter pomeroyi DSS-3 Gonzalez" /note="Conserved hypothetical protein" CDS complement(830887..832578) /locus_tag="Silicibacter_814" /function="COG: D-alanyl-D-alanine carboxypeptidase" /translation="MAVFSEVDDGRPSSLWVRFGRGQRRGTVQTFRNKFRALCRRSAQ ALTLALGVASIAPERATAAPYAAMVMDARTGEVLHSRNADTRLHPASLTKMMTLYIAF EAVRNGEITLDTQITVSRNAEAEPPSELGLRRGQKIALRYLIRAAAVKSANDAATAIG EAISGSEAAFARRMNRTAKALGMTRTTFKNAHGLTANGHMSTARDMTILGRHMLYDYP EYYNLFSRTSTNAGTKVVYNTNRRFLAAYRGADGIKTGYTRAAGFNLVSSAKRGDERI IATVFGGKSTAARNAKIAELLDLGFRRAPAYAKLQKPPMPPYLGNSGVRLAEDDTHGM AGKTIRVSGVISETLRPRPRPLPEPAPETLLAEAETEVETGTVAAPEEVQLAALDSDA LKSGINDALLEVTEVSDVSAIQPQARPEALQAEVEGEQALQAEIRTAVARAVEAPTQP RYTGPRPQARPAKFNTEVASLEEPVVVTRLSTSGGRYWGINVGRYTNRFQAEKVLLRT ALAEMETLEGSLRKVVQSPRGFDANFLGMTKESAELACKRLNSRNVTCETLGPSS" /product="D-alanyl-D-alanine carboxypeptidase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3658 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 832724..832846 /locus_tag="Silicibacter_815" /translation="MLRVPSLNKAILLWKLCGKFSSSCGAKSGITPIFSDQMKR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(832895..833608) /locus_tag="Silicibacter_816" /function="COG: Predicted hydrolase (HAD superfamily)" /translation="MSRTLTTIGFDADDTLWHNERFFRVTQDRFAELLMDHTSEDMGP EALDRKLLDAEKRNLGAYGYGVKGFTLSMIETAIEVTEGRVPAAVIKELLEAGQMMLS FPIELLPHAQTAVETLAKEHRVILITKGDLLDQERKLAQSGLGELFDAVEVVSEKTPQ VYIDIFERHGDGAARALMAGNSMRSDVVPVVRAGGHGVYVPHGAIWEVEAAEPPTESP RYHEIPDLGALPELVERLA" /product="hydrolase, haloacid delahogenase-like family" /transl_table=11 /note="identified by match to putative ortholog SPO3657 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 833699..834040 /locus_tag="Silicibacter_817" /function="COG: Uncharacterized conserved protein" /gene="clpS" /translation="MLMQPLMMSDNPDDESDLGLLTKTRPRTQRPPRYKVLLLNDDYT PMEFVVIVLERFFGLNHAQAFEIMLTVHKKGLAVVGVFSHEVAETKVAQVMDYARRHQ HPLQCTMEKDD" /product="ATP-dependent Clp protease, adaptor protein ClpS" /transl_table=11 /note="identified by match to putative ortholog SPO3656 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 834080..835066 /locus_tag="Silicibacter_818" /function="COG: 16S RNA G1207 methylase RsmC" /translation="MSQRLSLVVQSGDFRVPDEGRIAVFHPREGHDLSDLPDARLEII QPLKPEYDYWAGRGLTSVAEVAEDATYDAAVVFIPRSKPLARQLVAQAVAATQGPVLV DGAKTDGIDSLLKELNKRTRPSHAISKAHGKAFCIEGGIDLSDWVPGPSEVDGGFVTA PGVFSADAIDPASALLARALPKKLGKEVADLGAGWGYLSAEILRRSNLETLHLVEADH VALTCAQTNVTDAHAEFHWADARSWGQKGSLDAVVMNPPFHSGRAAEPSLGQAFIANA ARLLKPAGQLWMVANRHLPYEALLGECFVSFEEAAGDNRFKILHGVRPRRKG" /product="methyltransferase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3655 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 835230..836033 /locus_tag="Silicibacter_819" /function="COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /translation="MSFSISGKTAIVTGAANGIGLAIGRQFAREGANVMFVDHDEPTL LQELGGDVEDSNIRHFAGDLRERLTIANLLSATIDAFDQVDILVNGARKVVPSEPLNP DDESVEFLLKQNLMSTLRLSQHVAKRMIRQAEERDDEGPNGAIINLSSIAARRTHPDL MGYSVASAALDQMTRSLAVSLAPHRIRVNSIAFGSVMSASMQATLKDNRSLRQDIEEH TPLNRIAPPTELTETAQFLASEASGFMTGQVLTLDGGRTLLDPVTAPVH" /product="7-alpha-hydroxysteroid dehydrogenase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3654 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 836073..836975 /locus_tag="Silicibacter_820" /gene="hemF" /translation="MAQNTAEMRDEKARAAAWFRELRDQIVAAFEGLEDSHHEGPFTE MGAGRFDVSDTKRTAEDGSDAGGGLMSVMRGGRVFEKVGVNISEVYGTLGARAQQAMA ARKGLPGMKEDPRFWASGISLVAHMRNPHVPAVHMNTRMFWTPHGWWFGGGSDLNPCI EYDEDTAHFHEVQQTHLDPHGADLYPRLKAWADEYFFIPHRGRARGVGGIFLDDHNTG DWAQDFALIQDIGRAFLPAFLPLVERRRGHACSADDKEAQLIHRGLYAEYNLVYDRGT KFGLETGHDANAVLMSLPPLAKWI" /product="coproporphyrinogen III oxidase, aerobic" /transl_table=11 /EC_number="1.3.3.3" /note="identified by match to putative ortholog SPO3653 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 837097..837975 /locus_tag="Silicibacter_821" /translation="MIFHRLLSMGLLAALAACGSTTQDAVPPPPLEAAAEQVVNPAFA RAYAALSTYPKYGDNDPHDWEGGTPWAYPIHGIDVARYQGAIDWRQVGAAGVSFAWIK ATEGGDLLDPEFKSNWRGARRAGVRRGAYHFYYFCRSPEDQARWFIRNVPKEAGSLPP VLDIEWNHTSPSCKRRPSGAEARHEAERFIKKITQHYGRRPVVYTTVDFYRDTNIGRL RGVDFWLRSVAGHPEQVYPGASWAFWQYTGTGSVPGITGDVDLNVFAGSAEGWLKWLG YQKYVESEQVPSRPEE" /product="glycosyl hydrolase, family 25" /transl_table=11 /note="identified by match to putative ortholog SPO3258 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(838194..839150) /locus_tag="Silicibacter_822" /function="COG: Porphobilinogen deaminase" /gene="hemC" /transl_table=11 /note="identified by match to putative ortholog SPO3649 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="porphobilinogen deaminase" /translation="MTLTLPSPASPLKIGTRGSPLALAQAYETRDRLARAFELEPTAF DIVVIKTTGDNRAMIDADRPLKEIGNKGLFTKEIEEALLSGGIDIAVHSMKDMPTLQP EGLTLDCYLPREDVRDAFVSPGIHSIADLPEGAVVGTSSLRRRAQLLHRRPDLQVVEF RGNVQTRLQKLENGVASATFLAMAGLRRLDMAEAVPATPISVDDMLPAVAQGAIGIER RSSDITTAAMLEAIHHAETSLRLAAERAFLAALDGSCETPIAALADLSGGTIQLRGQI LRPDGSEALSDEQDGAIEDGAELGRQMGETLRARAGAGFFAH" /EC_number="4.3.1.8" CDS 839271..840308 /locus_tag="Silicibacter_823" /function="COG: Uroporphyrinogen-III decarboxylase" /gene="hemE" /transl_table=11 /note="identified by match to putative ortholog SPO3648 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="uroporphyrinogen decarboxylase" /translation="MGQQKTILRALAGETQAVPPIWMMRQAGRYLPEYRATRAQAGDF LSLCYNPELAAEVTLQPIRRYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTITT DADFAKLGPASDVHETLSPIYETVRILSKELPSETTLIGFAGAPWTVATYMIAGRGTP DQGPAHALMQENTPLFEALLARITEATISYLSAQIEAGAEVVKIFDSWAGSLKGEAFD KYALEPARQITAALKARHPHVPVIGFPREAGEKYIGFHAATGVDCVALDNSVDPEWAA EHVQVAGCVQGNLASRHMVSGGEALVQDTRRIVKAFSKGPHIFNLGHGITPDADPDNV QRMIDTVREGA" /EC_number="4.1.1.37" CDS complement(840367..841488) /locus_tag="Silicibacter_824" /function="COG: Predicted acyl-CoA transferases/carnitine dehydratase" /translation="MLEGIRIIEIEALGPAPFAAMMLSDLGAEVICIHRKGAAATSIM PERSILDRGKKSIALDLKDPSDLKIAQDLIATADGLIEGFRPGVMERLGLGPQAMQSN NPRLVYGRLTGWGQDSPRANEAGHDLNYIALSGALWPASNAGNAPMPPATLVGDIGGG ALYLVAGLLAGLLRAAQTGMGTVVDAAIYDGSAHMMTLLMALRQAGSFGETRGENLLD GPHWSRTYRCRCGGYIAVQCLEPKFYEIFLERLNLAQDTDFQQQFDKASWPALTSRLA RLFATQDREHWSALFATSDACVTKVLSPSEAAKDPMNDRQTWHTTGGILQAAPAPRFD GQTRAPKKPPNRDEHRAEILAMLRADVSPSSNEKYPGGV" /product="CAIB/BAIF family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3647 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 841690..842235 /locus_tag="Silicibacter_825" /gene="coxG" /translation="MQMSDQKEIAADPASVYAALLSPEVLKACVPGAQDVSGSPEEGF EAKVTQKVGPVKATFTGHVTLSDMVPGEKLTISGEGKGGAAGFAKGGAVVTLTPSETG TLLSYEVEAKVGGKLAQLGSRIIDGFAKKMADQFFTNLQDALAPAPLDAADAEEDAEA GGAKPKGWFRKLLGGASEENT" /product="carbon monoxide dehydrogenase operon G protein" /transl_table=11 /note="identified by match to putative ortholog SPO1517 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 842433..843362 /locus_tag="Silicibacter_826" /function="COG: ABC-type spermidine/putrescine transport systems, ATPase components" /translation="MSTILSITDLRKSYAGGFEALKGVNLDIEEGEILALLGPNGAGK TTLISTICGISTASSGSVTVGGHCIERAYRAAREMIGLVPQEINLEPFETVMNSVRFS RGLFGKPKNDALIEEILKKLSLWDKRKSQIKELSGGMKRRVLIAKALSHEPRVLFLDE PTAGVDVELRKDMWDVVRELRESGVTIILTTHYIEEAEAMADRVAVIAAGEILLVEEK SDLMARMGKKELQVILTEPLSTVPQALAQHELRLGEDGRSLIYTYDVKAERTGITSLL NDVAAAGLVLADVSTRQSSLEDIFVGLVSGEDA" /product="ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3642 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 843359..844120 /locus_tag="Silicibacter_827" /function="COG: ABC-type multidrug transport system, permease component" /translation="MNWTAIAAIYRFEMARFFRTLAQSFISPVLSTSLYFVVFGAAIG SRIDEVEGVSYGAFIVPGLIMLSVITQGISNASFGIYFPKFIGTIYELLSAPVNFLEI VLGYVGAAATKALFIGVVILGTAYLFVDITIAHPFAMILFLVLTCISFALLGFIIGIW AKNFEQLQLVPLLIITPLIFLGGSFYSISMLPPVWQTITLFNPVVYLISGFRWSFFGV ADVPIGLSLLAIALFTGLCLLVIGWIFRSGWRLRS" /product="ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO3641 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 844158..845156 /locus_tag="Silicibacter_828" /function="COG: Periplasmic serine proteases (ClpP class)" /translation="MQSRPLGRAPPPLRRAARLRQVAPEARHSAGLNTLHFYPLQGRK RNNEIIPPSRYLVSKGWAFYIGAMSFRLPFTKRPPQVAVVRLSGAIGMAGRGSLNDST LAPVLERAFTKGKPKAVALEINSPGGSPVQSALIGARIRRLAEERDVPVIAFVEDVAA SGGYWLAAAADEIYADASSVVGSIGVISAGFGAHVFLARQGLERRVHTAGESKSMLDP FRPENEEDVARLKGLLNDIHANFIDHVTDRRGEKLSTEEKLFTGEIWLARRAKELGLI DGIGHLRPVLQERFGDKVRLRRHGIKKPFLSRFGLSMAEDALAAVEERAQFARFGL" /product="peptidase, family S49" /transl_table=11 /note="identified by match to putative ortholog SPO3640 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 845328..846272 /locus_tag="Silicibacter_829" /function="COG: Ca2+/Na+ antiporter" /translation="MMPWLLSVLGLVILLLAGDALVRGAVNLSLRVGIPALIVSLTIV AFGTSAPELLIAIQAVHENADGIALGNVVGSNTANILLVLGLPALMRALHTSECNTRK NYIFMIAASVLFIALAFVGTFTWVSGVVLLLALFGVLFTAFREAQAHRAAGEDDELEE IDEADPDMPYWRIGIYLVLGLIGLPLGAELLVENATIIARMYGLSETVIGLTLVALGT SLPELATTLVAALRRQADVALGNVIGSNMFNLLAIIGLTTFVGPITVDPAFLRFDLWV MLASSLLIIPFVFFRQDITRIWGIILTGLYVVYVWSLL" /product="K+-dependent Na+/Ca+ exchanger related-protein" /transl_table=11 /note="identified by match to putative ortholog SPO3639 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 846309..847085 /locus_tag="Silicibacter_830" /function="COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /translation="MRALVTGAGKRLGRAMALALAEDGYDVAVHYASSEQDANDVVAQ IEARGQRAVALRADLLRDTETEALLPQAAEALGGDITCLINNASIFEPDDLASVTRDS WDRHMQSNLRAPVLLLQALAAQSLPDLSDEAGEPRAAAVAINMVDQRVNKLTPDFLSY TLAKSALWTLTQTAAQALAPRIRVNAIGPGPTLQGPRQSVADFAAQRRATPLQRGAGE QDITSALRYLVGAPAITGQLICVDGGQHLAWQTPDALLPE" /product="oxidoreductase, short chain dehydrogenase/reductase family" /transl_table=11 /note="identified by match to putative ortholog SPO3638 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 847395..849302 /locus_tag="Silicibacter_831" /function="COG: Nuclease subunit of the excinuclease complex" /gene="uvrC" /translation="MAQNHMSETMNDISAESPDQPEPPRTGYGVIQAYLKTLDSSPGV YRMLDHESRVLYVGKARNLRARVSNYTRPGHTQRIETMISQTSRMMFLTTRTETEALL LEQNLIKQLKPKYNVLLRDDKSFPYIMVSKNHAFPQLKKHRGARKGKASFFGPFASAG AVNRTLNQLQKAFLLRNCTDTMFENRTRPCLQYQIKRCSGPCVGKISQADYADSVRDA ERFLAGRSTKIQEELGAEMQAASEAMEYERAAALRDRIKALTQVQSAQGINPRGVSEA DIIGLHLENGLACVQVFFIRANQNWGNQDFYPRVAEDMSAAEVMEAFIGQFYDNKDVP RQLILSDDIENADLMAVALSEKARRKVEIVVPQRGEKTELVASAVRNARESLARRMSE SATQAKLLRGIADAFGLEAPPNRIEVYDNSHIQGTNAVGGMIVMGPEGFMKNAYRKFN IKDGEVIAGDDFGMMKAVLNRRFSRLLKEDPDRQKGMWPDLLLIDGGAGQVSAVAEIM EEHGVQDIPMVGVAKGVDRDHGKEEFYRPGENAFALQRNDPVLYFIQRMRDEAHRFAI GTHRAKRAKSLVANPLDDIPGVGARRKKALLTHFGSAKAVSRANLSDLKAVDGVSDAL AETIYNYFQVR" /product="UvrABC system protein C" /transl_table=11 /note="identified by match to putative ortholog SPO3637 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(849448..849654) /locus_tag="Silicibacter_832" /gene="rpsU" /translation="MQVSVRDNNVDQALRALKKKLQREGVFREMKLKQHFEKPSEKKA REKAEAIRRARKLARKKAQREGLL" /product="ribosomal protein S21" /transl_table=11 /note="identified by match to putative ortholog SPO0229 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 849772..850482 /locus_tag="Silicibacter_833" /translation="MAENQGNFTDPSTEIQEKLLDAALMHVTFDGWTPATWDASVADS GVDSTLAEALFPRRAVDLAVAYHKRGDAMMLARLKEADLGSLRFRDRVAAAVRYRLEA VEDKEAVRRGATLFALPQHAAEGAKLIWGTADAIWTALGDTSEDANWYTKRATLSGVY SSTVLFWLGDDSPEHQASWAFLDRRIDNVMQFESLKAQVNKNPLLKPLLAGPNWLMSH VRAPERREDLPGRWQPRA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0230 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 850599..851603 /locus_tag="Silicibacter_834" /function="COG: NADPH:quinone reductase and related Zn-dependent oxidoreductases" /translation="MTLELPQTMRAIEISEFGAPNVLKLVERPVPSAGYGQVVIRVAY AGVNRPDALQRAGAYAPPKGASDLPGLEASGEIVALGEGVTGWNLGDRVCALLPGGGY ADYVATPAAHCLPVPKGLSLKEAACLPETCFTVWSNVVTRGGLRAGERFLVHGGSSGI GTTAIQLASALGARVYATAGSDDKCAACVGLGADVAINYRDEDFVEILRADGGAHLIL DMVGGDYIPRNIKALADDGRLVHIAFLQGPKAELNFAQIMARRLTVTGSTLRPQSDLA KARIARDLLEAVWPLIEAGKLRPVMDSTFALAEAAIAHARMEGSTHIGKIVLEVAGAD " /product="alcohol dehydrogenase, zinc-containing" /transl_table=11 /note="identified by match to putative ortholog SPO0231 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 851951..853396 /locus_tag="Silicibacter_835" /function="COG: Pyruvate kinase" /gene="pyk" /transl_table=11 /note="identified by match to putative ortholog SPO3600 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" /product="pyruvate kinase" /translation="MKRTRNVKIVATLGPASETYETIRALHEAGADVFRLNMSHGSHD EIAVKHKIIRQVEEDLDSTIAILADLQGPKLRVGVFANGAEELEEGANFRLDLDPAEG DLSRVCLPHPEIFQALEPGASLLVNDGKIRLKVEDCGEDYANCVVTTGGTISNRKGVN VPDVILPLAALSEKDRADLEFVCELGVDWLALSFVQRAKDVFEARALADGRAAILSKI EKPAAVDNFAEILDASDGIMVARGDLGVELPVSHVPPIQKRLVRKSRAAAKPVIVATQ MLESMIESPMPTRAEVSDVATAIYEGTDAIMLSAESAAGQYPIEAVQTMDKVATEVEQ DPTYRDIIAASRSSKGDTIADGIVAAAREIAEKTEIKAICCFTQSGTTALLTARERPY VPILALTPLAKTARRLCLTWGCNCVVTPKVDRFKGAVVSAARAARSGGFASETDQVVV TAGVPFNVPGTTNILRIAPCDERLIYNTDPE" /EC_number="2.7.1.40" CDS 853771..853971 /locus_tag="Silicibacter_836" /gene="rpmI" /translation="MPKMKTKSSAKKRFKVTATGKVMAGQAGKRHGMIKRHKKFIRDA RGTTTLSAPDAKIVKGFMPYDR" /product="ribosomal protein L35" /transl_table=11 /note="identified by match to putative ortholog SPO3599 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 853987..854352 /locus_tag="Silicibacter_837" /function="COG: Ribosomal protein L20" /gene="rplT" /translation="MSRVKGGTVTHARHKKVIKAAKGYYGRRKNTFKVARQAVDKANQ YATRDRKNRKRNFRALWIQRINAAVRSHDEALTYSRFINGLNLAGIEVDRKVLADLAV HEPEAFGAIVRQAQDALAA" /product="ribosomal protein L20" /transl_table=11 /note="identified by match to putative ortholog SPO3598 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(854466..855449) /locus_tag="Silicibacter_838" /function="COG: Adenylate cyclase, family 3 (some proteins contain HAMP domain)" /translation="MHDRITRKLTTILAADAEQFSAAMTTDEVGTYTELQSARDVFFK LIERHGGRVANTAGDGLIADFPSVVEAVQCAIEVQQELAAKDSALSFRIGVNLGDVIC DGEDLIGEGVNLAARLQTMAEPGGVLISQQVYDHVKNKLSIGFEYLGDRRPRNLPEDV AVYRISLGAPRPSRASHPRSSAQVWSDPDPFADAPQRDYGLTDDAEDPEEVPLRGLDR LVGRRLPLSKRSKTLVLVAAGLFVIDLASGRGIWAHWPLLVIAMVIGLRDGPRLLGRT EFRGIPVKLCVIAAFLLLVNLFSWQGVMWSLWPIGGMAAYSLLKRRWSEAE" /product="adenylate/guanylate cyclase" /transl_table=11 /note="identified by match to putative ortholog SPO3650 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 855671..856744 /locus_tag="Silicibacter_839" /function="COG: Phenylalanyl-tRNA synthetase alpha subunit" /gene="pheS" /transl_table=11 /note="identified by match to putative ortholog SPO3594 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="phenylalanyl-tRNA synthetase, alpha subunit" /translation="MDDLKAKYLGQIAEATDENALEAVRLAAVGKKGEVALKMRELGK MTPEERQVAGPALNALKDEINAALAAKKAALGDAALDERLRSEWLDVTLPTRPRRQGS IHPISQASEELTAIFAEMGFSAQEGPRVDTDWYNFDALNIPGHHPARAEMDTFYMHRA EGDDRPPHVLRTHTSPVQIRSMEKLGAPLRIICPGGVYRADYDQTHTPMFHQVEGLAL DENISMANLKWVLEEFVKSFFEVDEVELRFRASHFPFTEPSAEVDIRCSWDNGQLKIG EGDDWLEILGSGMVHPKVIAAGGIDPEKYQGFAFGIGIDRLAMLKYGIPDLRAFFESD LRWLRHYGFSCLDVPTLHGGLSR" /EC_number="6.1.1.20" CDS complement(857143..857748) /locus_tag="Silicibacter_840" /function="COG: Aconitase A" /gene="leuD-1" /transl_table=11 /note="identified by match to putative ortholog SPO0215 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="3-isopropylmalate dehydratase, small subunit" /translation="MEKFETFTGIAAPMPLVNIDTDMIIPKQFLKTIKRSGLGVHAFD EMRYDRQGNEVPDFVLNKPAYRESSILVAGDNFGCGSSREHAPWALADFGIKVVISTS FADIFFNNCFKNGMLPIVLPQEQVDLLMKDAEKGENARMTVDLEAQEITTSEGDVIKF DVDPFRKHCLINGLDDIGLTLEKADAIKAYEERAAQERPWV" /EC_number="4.2.1.33" CDS complement(857761..859164) /locus_tag="Silicibacter_841" /function="COG: Aconitase A" /gene="leuC-1" /transl_table=11 /note="identified by match to putative ortholog SPO0216 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="3-isopropylmalate dehydratase, large subunit" /translation="MSPKTLYDKIWDAHVAQEAEDGTCLLYIDRHLVHEVTSPQAFEG LRMAGRKVHAPEKTIAVPDHNVPTTAGRENPDQMPEDSRIQVAALDTNAREFGVHYYP VTDIRQGIVHIVGPEQGWTLPGMTVVCGDSHTATHGAFGALAHGIGTSEVEHVLATQT LIQKKSKNMKVEITGKLSPGVTAKDIVLTIIGETGTGGGTGYVIEYCGEAIRDLSMEG RMTICNMAIEGGARAGLIAPDETTFEYVKGRPHAPKGAQWEAAVNWWKTLYSDDDAHW DKIVTIRGEDIAPTVTWGTSPEDALPITATVPAPEDFTGGKVEAARRALDYMGLTPGM KLSDIEIDTVFIGSCTNGRIEDLRAAADVVKGKKIKDGMRAMVVPGSGLVRAQAEEEG LAEIFKDAGFEWRLAGCSMCLAMNPDQLSEGERCASTSNRNFEGRQGFKGRTHLVSPA MAAAAAVTGKLTDVREL" /EC_number="4.2.1.33" CDS 859449..860876 /locus_tag="Silicibacter_842" /function="COG: Small-conductance mechanosensitive channel" /translation="MEQDILPEEVQGTLDYLLELAQDYWEIALTPGWRQYQVLIVIAL VLASILMRKLTQGRWEAWARSREGWPKWRLRLAVQVLRRLSLIYFTVFSWVVFAVMQE VTWPSRSYLIGAVAKLATAWLVIALMARFIANPTLRKLASWLLWIYATLAVFNLVDDT ARVLDSTAFDIGSFHLSLLVVLKALVLATALLTFARMGSALAERGLSGNEDLSPSMKV LAGKAVQVLLYGIAFVIVIRSIGFDLTGLAVLSGAVGVGIGFGLQKVVSNLVSGIIIL MDRSIKPGDVISLGETFGWINALGARYVSVVTRDGKEYLIPNEDLITSQVVNWSHSNR YVRLDIHFGTSYDDDPHLVRKVAIAATMTVDRVLDRDGMRPVCHIVGFGDSSVDYILR FWIADPTGGLTNIRGNVFLALWDAFKAEGVSIPFPQRELRLLNNSLAVEMAEGRMGPK GDVEGEEQGNAERATQSRGAAPKLD" /product="mechanosensitive ion channel family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0218 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 861007..861366 /locus_tag="Silicibacter_843" /function="COG: Uncharacterized homolog of plant Iojap protein" /translation="MAASATQFSSEDLLERILSSLDEDKAEDVTQIDLRGKTSIGDYM VVASGRSTRQVAAMSEKLTEKLKHEFGVACKVEGKDAGDWVLIDTGDVIVHIFRPEVR DFYQIEKMWLPAGAVAS" /product="iojap-related protein" /transl_table=11 /note="identified by match to putative ortholog SPO0219 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 861496..861966 /locus_tag="Silicibacter_844" /translation="MRVHICAVGRLRAGPEKTLIDDYLQRFDRSGRALGLGPARVIEV EDKKNAGMGAEADLLRKALPKGALICTLDERGKVISSPDFAEKLAGWRDMGRQDLAFV IGGADGIDPSLRAEADFSISFGKMVWPHMMVRLMLAEQVYRSATILSGSPYHRV" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0220 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(861972..862331) /locus_tag="Silicibacter_845" /translation="MLRYVLIPFLGLAGPFAAHAADPVIEQATAEPSGDTWRFSVTIS HPDTGWEHYADGWRVLDMAGNELGLRVLAHPHVNEQPFTRSLAGVRLPAGTTQVQIQA RCNLDGWAATTTVIDLH" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3476 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(862367..863089) /locus_tag="Silicibacter_846" /translation="MIWIERLSQFSTWDFISLACYLLGWLWIGWRIENPSKSRPSVSI LMADFRREWMKEMVTRSPRIFDSQVISSLRQATAFFASATMLALGAGLALIGNTDQLA GVAQDLALGQTPDFVWEIKIILVLAALTNAFLSFVWSHRLFGYCSVLMAAVPNEPSDP RAYPRACQAAEINITAARSFNRGLRATYFSLAGLAWLVSAEALIIATVITLAVLYRRE FISRSRRILMQSKPETTSPTEL" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3477 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 863171..864619 /locus_tag="Silicibacter_847" /function="COG: FAD/FMN-containing dehydrogenases" /gene="glcD" /translation="MEMPPPNAAILSLKAELLQRLQQVLPKDALISDEAETRAYECDA LTAYKCPPMLAVLPRSTQEVSDVLRICHQMNVPVVPRGAGTSLAGGALPTADCVILGV ARMNEVLETDYDNRVIRVQTGRTNLSVSGAVEEEDFFYAPDPSSQLACAIAGNIAMNS GGAHCLKYGVTTNNLLGVTMVMMDGTVVEIGGAHLDAGGLDLLGVICGSEGQLGVVTE ATLRILRKPEGARPVLVAFDSNEVAGACVSDIIKAGVLPVAIEFMDRPCIEACEAFAK AGYPMCEALLIIEVEGSEAEIDHQLKLITEIARRHNPVELREAGDSEEAARIWLGRKS AFGAMGQINDYMCLDGTIPVSALPQVLRRIGEMSAEFGLKVANVFHAGDGNMHPLILF DANKPGDLELCEAFGAEILKLCVEVGGCLTGEHGVGIEKRDLMLHQYALADIEAQLRV KDVFDPKWLLNPAKVFPLSTTQSRRNVAIAAQ" /product="glycolate oxidase, GlcD subunit" /transl_table=11 /note="identified by match to putative ortholog SPO3478 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 864677..865768 /locus_tag="Silicibacter_848" /function="COG: FAD/FMN-containing dehydrogenases" /gene="glcE" /translation="MTAQSEAELADIIAGAHEPLCIQGGGTRGVSVPGEVLTTQGLSG VKLYEPGALTLVVGAGTPVAEIETLLAAENQRLAFEPLDLRGLLGTGGAPTIGGAFAT NASGPRRIQCGAARDFLLGVRFVDGRGEVLSNGGRVMKNVTGYDLVKLMAGAHGTLGV LTEVSLKVLPCAETQTTLAVRGVDLPEGVAALSAALGSPYDVTGAAYDPTERVAYVRL EGFEGAVRYRAEALRALLAPFGEVEEVSGSEELWRDIRDLKALAGVEGDVWRLSVKPS DAVALIPALGATRCFCDWGGGLIWAVMPKGVDLRQRMTVAGHATLIRSEGRSPLARHH PEPAPLAAISAGLRQQFDPRGIFNPGLMG" /product="glycolate oxidase, GlcE subunit" /transl_table=11 /note="identified by match to putative ortholog SPO3479 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 865773..867092 /locus_tag="Silicibacter_849" /function="COG: Fe-S oxidoreductase" /gene="glcF" /translation="MQTSFTDAQLQDPGTQRANEILRTCVHCGFCTATCPTYQVLGDE LDSPRGRIYLIKDMLENERVPDEKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARAY IDKHYKRPFGDRALRWILARILPYPTRFRLALLGAKIARPFRGLMPDPRLRAMLEMAP KVIPPVSRNDDPQSFAPEGRQVKRVALMTGCAQKALNTDINDATIRLLRRLGCEVVVA DGAGCCGALTHHMGREDESHATAAKNIRAWMAEKNGKGLDAIVINTSGCGTTVKDYGH MFRNDALAQDAATVSNLAMDISELLMQLEMPEAEDKGLTVAYHAACSLQHGQQIKTHP KTLLKRAGFRVVEPADSHLCCGSAGTYNLLQPEISAQLKARKLRTLEAKNPDIISAGN IGCMMQIGSGTEIPIVHTVELLDWATGGPQPPALTAERSRPSVPILR" /product="glycolate oxidase, iron-sulfur subunit" /transl_table=11 /note="identified by match to putative ortholog SPO3480 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 867200..868039 /locus_tag="Silicibacter_850" /function="COG: V8-like Glu-specific endopeptidase" /translation="MLPIKKLIVSGVLCVLSAAAVAGTTLRGNDTRLKSLETTDAGRD WEAVGRLDRAGEGFCTGALIAPDIVLTAAHCLYDRDTMAQIDPTSIEFLAGWRNGRAS AYRAVKRAVLHPRYVYDGTLSAKRVRNDIALLQLQRPIRNTTVTPFETDARPREGARV GVVSYAQDRSEAPSLQEVCKVIARQDGVLVMSCDVDFGASGAPVFSFDAGRPRIVSVV SAKARVEGSAVSLGASLAEELALLQSQLTGAHVGSRMPQGVGRVQVGEPRRSDIGAKF ISN" /product="trypsin domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3482 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 868180..868647 /locus_tag="Silicibacter_851" /function="COG: Molecular chaperone (small heat shock protein)" /translation="MRTFDFAPLHRATVGFDQIADLMDRVMSSDLQQPSYPPYNIEKT SDDAYRISIAVAGFSEDELNVEVKEHALVVSARKSEENGERTYLHRGIATRAFERRFT LADHVRVQGASHGDGMLHIDLVREVPEALKPRRIEISSAAASKPKEISGSTVN" /product="heat shock protein, Hsp20 family" /transl_table=11 /note="identified by match to putative ortholog SPO3484 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 868784..869389 /locus_tag="Silicibacter_852" /translation="MTLAEMTSTSTRTQLIESACRLFAAHGYAGASISAIAQELGLSK QALLHHFGSKNALYALAVEQAASSVLQLLFDAMEDDRPPEEQLETFFAAYQSALQADC ASAQIVLRELLDQALPRDGGTSFATLFESLVATVQATERWEGKGVAGALGVVTQLLGA ASLMGCTHDAWGRYYDASVLSTAKVQARAPFAEMVSGVLRG" /product="transcriptional regulator, TetR family" /transl_table=11 /note="identified by match to putative ortholog SPO3388 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(869369..870262) /locus_tag="Silicibacter_853" /function="COG: Permeases of the drug/metabolite transporter (DMT) superfamily" /translation="MTQSLPTPLKAAGLMVIAGACFALVNTALQSATMLHGASAPMVT FWQYLIALLFYIPWIWRNWTAVLSTRQMITHVIRVVLAVAGVQLWTLGLAHVPIWQAI ALILLSPFFVTIGAGLFLGEDVSLHRWGAVVVGIFGGMVILAPWSDRFQIAALLPVAA AAFWAASSVVTKHLTRRDSTETVTIYLLLLLSPANALLSLGGGFALPEGTIWLVIGAG LLTALAQHSLVRAYTLADAAFLQPFDHLKLVFNVGLGAVVFGFLPDGNMWLGTALIIV ASAYLLNREARAKPGSAAQNA" /product="Hypothetical transport protein yijE." /transl_table=11 /note=", Protein of unknown function DUF6" /note="Conserved hypothetical protein" CDS complement(870657..872945) /locus_tag="Silicibacter_854" /function="COG: Uncharacterized conserved protein" /translation="MLCKHRLTQTSRNIQKTVANSLHSAGMALASISFLQELPMSLRL VCLTSALALTAGFAQAEKAFNRIASFPVIKNMAEGADQSRESSPEIIDVTADGMTLVY TDSPLGALGMIDITDAANPVPKGNIALPGEPTSVAVVGTIAYVGVNTSESYTQPSGQV MAFDTATGAELASCDLGGQPDSLAKSKDGAFLSIAIENERDEDLNDGIIPQLPAGNLV MINTTQDGLNCASMKMVDLTGLAEIAGSDPEPEYVSINNLDETVVTLQENNHMVVVSR DGEILSHFSAGAVDLDGIDATDERGALIFDESQKGRLREPDAVTWIDADHFATANEGD YNGGSRGWTIFHKDGSVVYDSGVSFEHAIIQIGHYPDKRSDAKGVEPESVTFAEFDGT PFVFVGAERASVVGVYDVTDPAKPVLTQLLPSGTGPEGYVTIPERGLLVSANEKDLLE DGGARAHVMLFELQDGAATYPHLTSAGAKELIGWGAISGMVADEDGMIWAVNDSFYGF QPSIFKIDPSQTPARITDVIRIHRANGDAAQKLDLEGITLDGEGGFYVASEGRTERAI PHAIYHVSAEGLIKTNKGEIAIPAELQSVEKRFGFEGITKVGNTLWMAVQREWKDDPE NHVKLVSYNLDTKEWGAVLYPKAAPATGWVGLSEIVAHGDHVYVIERDNQHDDRAVTK KIYRIALSDMVPAPLGSDLPVVTKEEVRDLLPDLKSTGGYVLDKVEGLAILADGTAWV STDNDGVDDSSGETMFWSFKVD" /product="conserved hypothetical protein" /transl_table=11 /EC_number="3.1.3.1" /note="Quinoprotein amine dehydrogenase, beta chain-like, potentially involved in shikimate pathway, belas" /note="High confidence in function and specificity" CDS 872996..873427 /locus_tag="Silicibacter_855" /translation="MGMAILRQIEVQLIKVSFNRVFAQKAALAEKFYHHLFLELPDAE VMFTRDFSHQTEMFARVLTTGMQSLGRDREMMVLVDDLLQRHKHLGLTLDQMYTAQRA LHLAFCEVMQAELTAAEVSAWDNAIGRLCRALAAGIEPPAA" /product="globin domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3329 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(873451..874923) /locus_tag="Silicibacter_856" /function="COG: NAD-dependent aldehyde dehydrogenases" /gene="gabD-2" /transl_table=11 /note="identified by match to putative ortholog SPO3328 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="succinate-semialdehyde dehydrogenase" /translation="MLDATTDLKSLLADPTLLEDRAYINGAFVAGEGTFEVTNPARGD VIANVADVSRMQARDAIAAAQGAQKEWAKWTGKERAGVLRKWFDLMMAHQEDLAVILT AEMGKPLAEARGEIAYGASFIEFFAEEAKRVYGETIPGHQRDKRITVIKQPIGVAASI TPWNFPNAMITRKAGPALAAGCAFVARPASETPLSATALAVLAERAGIPAGVFNVIPA SDASGIGKEFCENPIVRKLTFTGSTNVGRILLRQAADQVMKCSMELGGNAPFIVFDDA DLDAAVEGAIMCKFRNNGQTCVCANRIYVQSGIYDAFAAKLKEKVEAMKVGDGLEDGT HFGPLISEAAVKKVEDHIADAMDKGAEVILGGAPSELGGTFFEPTIVTGATPDMAFAQ DETFGPLAPLFKFETEDEVIEMANDTIFGLASYFYAKDLSRVYKVAEALEYGIVGINT GIISTELAPFGGVKQSGLGREGSHHGIEDYLEMKYLCMSV" /EC_number="1.2.1.16" CDS 875027..875812 /locus_tag="Silicibacter_857" /function="COG: Esterase/lipase" /translation="MELDDAYANGAYIEGAADYPPRWAASAEDFRNSLQDRARLNLSY GEGDRHKFDLFLPEGTPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYEL CPEVRISEITQQISQAVTAAAKEIDGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIR NVVPISPLSDLRPLLRTSMNEKFKMDADAAIAESPVEMQNRYDAKVTVWVGGAERPAF LDQAIWLVEAWDADHVIAFEKHHFNVIEPLADPESDLVAVITA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0408 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 875992..877200 /locus_tag="Silicibacter_858" /function="COG: Xaa-Pro aminopeptidase" /translation="MTARPEMYRFHNGEKAPLQFSVAEYEERIARLRSTMSDLGVEAA VFTSMHNISYYSGFTYCAFGRPYGLVVTADQAVTISAGIDAGQPWRRCFCDNITYTDW QRDNFWRAILSVVGAQRVVGIEGDHLTLLQRGKLDHFLAPAKVVDLYEATMVQRMHKS PAELEMIRAGAAVADVGGFAIRDAVKAGVREIDVAMAGRDAMELEIARRFPDAEYRDT WVWFQSGLNTDGAHNPVTARQLQRGDILSLNTFPMISGYYTALERTMFVQEVDPASLK IWEANVAAHEYGMSLLKPGASCAEITHKINRFFEERDLLQYRTFGYGHSFGVLSHYYG REAGLELREDIDTVLEPGMVISMEPMLTIAHGEPGAGGYREHDILIITEDGNENITKY PYGPEFNVVG" /product="creatinase" /transl_table=11 /EC_number="3.5.3.3" /note="identified by match to putative ortholog SPO3327 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 877368..878006 /locus_tag="Silicibacter_859" /translation="MAYVKWIFILIFWLFVGSFLHYTLPQYDVVRIVNTYEERKELGD WTRMFWSTPDSQSAALLNRDVQFIQAVRPNGDAIVYRNEDTGWNWPPYFKFDTANLYT EANDAISTKDDPEWVRIMHYGWRSQLLTSFPNAVSISPAAGPDDKPINWISISILVLL AAVSWAIFVRLRRFKRNRLDPLFENVEDGFYAAGDAIDDRTRGLRRWFGRKS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3320 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 878165..878899 /locus_tag="Silicibacter_860" /translation="MKKLIAALGLATVSWIPTAHSAETLVVGVENIEYLPHYYWDGDS YSGFGADVLNRFAEDEGYTLTYRALPISRLMQAMVNGDVDLKYPDNAFWSADLKEGKS ITYSAPVVEAIDGVMVLPENLGQPVESIERLGTVLGFTAFAWMDRIQSGAVALTENSS FSGMVRQALAGRIDGAYANQDVVRRVLTDIGMEAEALVFDEGLPHSVSNYHLSSATHS EVVEKFDAWMAANPDVIAELKSKHGL" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(878980..880659) /locus_tag="Silicibacter_861" /translation="MPYLAVNEEQSGLFSPPSTLSRKQFDKTGYCILTMAKIAYILLC HKDPEAIIQQANRLTATGDFMAIHFDARAKTRDYRAIRSALSDNPNVTFAKRRVKCGW GEWSLVRATLNALEAAVDEFPRATHFYMLSGDCMAIKTAQYARAFLDQHDKDFIESFD FFESDWIKTGMKEDRLIYRHYFNERTQKRLFYAAFELQKKLKLTREVPADIQVQIGSQ WWCLRRRTVEAVLAMTRKRRDVMRFFASTWIPDETFFQTLVRHLIPEDEIESRTLTFL MFSDYGMPVNFYNDHYDLLLGQDFLFARKISPDAKELKTRLGRLYAARDVEFKISNEG RNLYKFLSERGRTGQRFAPRFWETESSLGRERELLILTCKKWHVAKRMLEQIRTLTNT PAIEYLFHEEGTPLPDLGGIQRTLAKRTRHRRALVRMLFDYYETDRLIICLDPSALEL MHDFYSDRSHTRLLRIDCDFSDSYLIGHAHRVGLAGEHAAKATLERLLPAIRNDISNE IDQIRDAGFVRHWTVAERGPESDNALAVSQFLDVPVETALEVVRTPYLFAD" /product="epsK domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3319 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 880694..881512 /locus_tag="Silicibacter_862" /translation="MGFPGTWMTESESVVYRVVPKCACSTIGQIMYYSDHGRFFDGDI HDSTAGLHKWAQDESKPLIESNVTAHRAYAFTCVRNPYTRILSSFFDKICGIQRNGRR YRGNLVPQLTYEYGIEVGGEDGKQEFDQIKSFRRFLLFARDTIRWRRPMEPDIHWSAT SGHVATFIVNGGRYDKVIWTEKFNEGMQQVLDAIETPHPVDLASIPRFNESEGHGPKR AHPVEDYFDDLSMHLVYEIYKRDFEVFKYDFENPANKMPIAEIDLDELHAKLGD" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3318 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(881734..883578) /locus_tag="Silicibacter_863" /function="COG: Dihydroxyacid dehydratase/phosphogluconate dehydratase" /gene="ilvD" /transl_table=11 /note="identified by match to putative ortholog SPO3314 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="dihydroxy-acid dehydratase" /translation="MPMYRSRTSTHGRNMAGARGLWRATGMTESDFGKPIIAIVNSFT QFVPGHVHLKDLGQMVAREVESAGGVAKEFNTIAVDDGIAMGHDGMLYSLPSREVIAD SVEYMVNAHCADAMVCISNCDKITPGMMMAAMRLNIPVIFVSGGPMEAGKIDIDSLDA KKIDLVDAMVAAASDKLTDEEVQHIEENACPTCGSCSGMFTANSMNCLAEALGLALPG NGSTLATHSDRKQLFLEAGRKIVEITKRHYEQNEKGLLPREIATFEAFENAMSLDIAM GGSTNTVLHLLAIAHEGKVDFTMQDIDRLSRKVPCLCKVAPNIENVHMEDVHRAGGIF SILGELSRAGLLHNDVPTVHSDSMGEAIAHWDIAVADNQAAKDLFKAAPGGVRTTQAF SQSNRFKDLDIDRKGGVIRSKEHAFSQDGGLAVLFGNIALDGCIVKTAGVDASILKFT GKAYVCESQDQAVNDILTGKVQAGDVVVIRYEGPRGGPGMQEMLYPTSYLKSKGLGKD CALLTDGRFSGGTSGLSIGHVSPEAAEGGTIGLVEHGDTIEIDIPNRSIHLAVDEATL AARRAAQDEKGWKPVAKRKRKVSTALKAYALLATSAAKGAVRQLPDDE" /EC_number="4.2.1.9" CDS complement(883717..884895) /locus_tag="Silicibacter_864" /function="COG: Xanthine/uracil permeases" /translation="MLRNLKLSHLAAGAIVVLVGYTSSVAIIFQAIEAVGATQTQANS WLVVLGLGMGLTSLTLSLRFRMPILTAWSTPGAALLATGLDGVSLPQAVGAFLFCGAL LTLTGLTGWFERLAKLIPDSLANALLAGILFQFGLSAFHALSDDAALVGAMGVTFLAG KVLFPRYAIPVVLLVGCLWAAGAGSFGDLDALTFSLSMPEFVAPEFSLPVLIGVGLPL YVVTMCSQNMPGVVTLRSAGYPPPVSASLTVTGLASLILSPFGGFAFNLAAITAAICA GPEADENPKSRYLSSVIAGVLYCLVGLGGATVISLFLIAPKALIATVAGLALLSTIGN SLSAALAESRGREAALITFMMTVSGVTFAGIGAAFWALLIGLAVTRLTTLPLPQPIKT " /product="benzoate transporter" /transl_table=11 /note="identified by match to putative ortholog SPO3378 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 885037..885600 /locus_tag="Silicibacter_865" /function="COG: Predicted transcriptional regulators" /translation="MSDESITLNLREIRAAAGLSLSRAAELTGVSKAMLGQIERGESS PTIATLWKIAKGFHLPLTALIEESTRPSGRSGEVYRTVEFPGSIAVKIVFPYDPSLGA ETFHVSLKPGQSHESLPHDTGVTEEVFVLEGRMEVLRDGDWVALETGQGLRFDADQPH GYRSLSTGAAFLNMHHYRQAALSRAAD" /product="DNA-binding protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3313 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 885673..886539 /locus_tag="Silicibacter_866" /function="COG: Permeases of the drug/metabolite transporter (DMT) superfamily" /translation="MERDTLRGSLLMALAMAAFAVEDMIIKSVAAAMPTGQVLILFGL GGMVIFAIMACAQGSALWHPGFCTRPLLWRFVAEVSGRLFFTLAIVLAPLSLASAILQ ATPLVVTAGAVVFFGESVGWRRWLAICVGFLGVLMILRPGLSGFEATSLLAVAGMLGF AGRDLATRAAPKTMSNAQLGLFGFAMLVIAGVILLSWTGGAVWPTVAQSGTLAAAVAV GVLAYMALTGAMRTGEISVVAPFRYTRLVFAMALGIAVFGERPDVMTLLGSALVVGSG IFTLLRNQRQKA" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0261 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 886635..887111 /locus_tag="Silicibacter_867" /function="COG: tmRNA-binding protein" /translation="MAKQKTDPNYKVIAENRRARFDYAIEQDLECGIMLEGSEVKSLR AGGSNIAESYAAVEEGELWLVNSYIAPYEQAKVFKHEERRRRKLLVSRKEMADLWNAT QRKGMTLVPLVLYFNHRGMAKIKIGIAKGKKNHDKREAQAKRDWSRQKQRLLKDHG" /product="SsrA-binding protein." /transl_table=11 /note=", SmpB protein, SmpB protein, smpB: SsrA-binding protein" /note="Conserved hypothetical protein" CDS complement(887243..887833) /locus_tag="Silicibacter_868" /translation="MLRRHFLASLAAVGVSTTALPALALNESSASALINGLVSDINKV IASGKSERAMYGDFERIFQRYSDTSYIAAYAMGVDARRATNAQKRAFSNAFQGYIARK YGSRFREFIGGRLEVTDVKKVKRWYEVSCVAYLRGQSPFEVTFHVSDRSGKDLFFNMF IEGVNLLLTERTEIGAMIDRNGGDIDKMISDLQKLS" /product="toluene tolerance family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3726 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(887837..888637) /locus_tag="Silicibacter_869" /translation="MRDPAPVITELVDMIALFKKSVTAMAFSAAVLTSACATQDPAAK AAGEIFDPYENTNRSIHQFNKGLDRYAFRPASKGYVAVVPPDMVTAFGNFAENLSKPG DAVNYLLQGNFKGAGQALGRFAVNTVLGIGGLGDPASDFKMPEARTDFGETLHIWGAG EGAYVELPAYGPSTTRDAVGIVVDFFTNPLSQFENNPAEDLQIPAEIVDQLGNRGTYS DTIDSILYESADSYAQGRQIYLQNRRFELGQEDVNSEIDPFELDTGGF" /product="VacJ lipoprotein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3727 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 888789..890552 /locus_tag="Silicibacter_870" /function="COG: ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain" /translation="MNNKFANAGRAELLAVRRQSRKLYWTVALFSAFVNMLMLTGPLY MMQVYDRVLGSRSEATLLALTLLVIFLYAMMGLLDAVRGRIMRRVAARFQAALDKRVF DAMIRRSAIANDPEAQTGLSDLESVQKFIASPGLMAAFDLPWTPIFLAGIALFHPWLG MLAIGGGSVLIAIALLNQLLSAAPSKAAMVSGHHATLQSEEIRTEAEMIQAMGMRESA FQRWRHARDKALADYVVASDVTGSFSTVTKTLRLFLQSAMLGLGAYLTLQGEVSAGAM IAGSILLGRALSPIEVGLGQWPLVQRARKGWSNLETLLSKTPPEPIRTALPKPKAKLE VEAVAATAPGETRPLLRNVTFRVEPGEAIGVIGPSGSGKSTLARVLTGAWRAAAGTVR LDGAALSQYDPSVLGDHIGYLPQRVELFEGTIAQNIARLASSPDAQAVVEAAKAAAAH EMIVSLPDGYDTKVRSGGGRLSGGQMQRIGLARALYGDPVILILDEPNSNLDNDGSVA LNNAIKRLKSHGKSVLIMAHRPAAIQECDKLLVVEQGAMVAFGPKDEVLRKMVANHRE LQPSGARRPAQGANALKGGPR" /product="type I secretion system ATPase" /transl_table=11 /note="identified by match to putative ortholog SPO3728 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 890549..891871 /locus_tag="Silicibacter_871" /function="COG: Membrane-fusion protein" /translation="MIDPMTETAHKSWSVRGALIAGALGVIILLGGFGTWAVFSNIAG AVVASGQIEVDRNRQVVQHIDGGVVEDILVDEGDLVTAGQTLVRLDAVDLRSQLTITE GQLFEMMARRGRLEAERDEVDTISFDAELLTLAQQRPEVAELVEGQARLFRARRESVR REVEQLEKRAVQIEDQITGVRAQQEATREQLVLIKEELSNQQSLLDRGLAQASVVLNL RRNQANLQGTLGELIASEAQARGRITEIEIEALKLRNQRREEAITRLRDLRYRELELI ETRRSLIDRLGRLDITAPVSGVVYGMSVRTPRSVIRPADPVLYLVPQDRPLVIAARVA PTDIDQIHVGQAVSIRLPALDQRQTPELFGSVTLFSADAFQDETTGASYYRAEIELNA GEMDRLPEGTVLIPGMPVESFIRTADRSPLAYLVKPLSDYFVRAFRES" /product="type I secretion membrane fusion protein, HlyD family" /transl_table=11 /note="identified by match to putative ortholog SPO3729 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 891983..892444 /locus_tag="Silicibacter_872" /function="COG: Putative translation initiation inhibitor, yjgF family" /translation="MSIDAKLQSLGLTLPEAPAPAANYVPFVVSGNMVYVSGQISADE NGLITGCLGADLDVEAGQAAAKRCALSLLAQVKAACGGDLGKLKRVVKLGAFVNSTAD FTQQPQVVNGASDLLVEILGDAGRHARSAVSSPSLPMGVAVEIDGVFEIEV" /product="endoribonuclease L-PSP family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3730 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 892453..893229 /locus_tag="Silicibacter_873" /function="COG: Glycerophosphoryl diester phosphodiesterase" /translation="MTAPRLPLAFLQRPITHRALHGLDENCPENSRAAIRAAIAAGYG IEIDLQLSADGQAMVFHDDELDRLTDATGPVRARTAVELGTIALRHGDGECIPSFAEV LELVAGQVPLLIEIKDQDGAMGTNVGALEAAAITDLRDYQGDVALMSFNPNSMAEVAR LAPHLARGLTTSAYDPLEWAPLSPARCDELRDIPDFERVSASFISHEASDVGCDRVRS LRAAGVPVLSWTLRTPAQEAEIASLVDNVTFENYLSAFGA" /product="glycerophosphoryl diester phosphodiesterase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3731 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 893277..894464 /locus_tag="Silicibacter_874" /translation="MDQAQIEIQVLSSLSQIAASDWDACACPEAEAGGRPLDPFTTHR FLSALEDSGSVGQGTGWQPQYLTCYLDGQLVACAPLYAKGHSQGEYIFDHNWAHAYER AGGRYYPKLQVAVPFTPATGRRFLVRPGYEEIGISALLQGAVQLASDNQLSSLHVTFC TSDEAEAGREIGLMSRSSQQFHWLNDGYAGFEAFLAALSSRKRKNIRKERKQAQGFGG SIETYTGADLRSEHWDAFWRFYQDTGSRKWGTPYLTRAFFEIIHDTMAEDMALVLAER DGVPVAGALNFIGAKTLYGRYWGCMEHHPCLHFELCYYQAIDLAIEMGLDRVEAGAQG EHKLARGYLPTETHSLHWVADPGFRAAIEQYLEAERAAVGEEIEILTSYGPFKKTHVE EQE" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3732 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 894461..894757 /locus_tag="Silicibacter_875" /gene="phhB" /translation="MTEKLSDETRGPLLEPLFATGWELETGRDAIRKTYEFADFVEAF AFMTKAAIWAEKWNHHPEWSNIYNKVTVVLTTHDVGGVSSLDAKLARKMDGLTS" /product="4a-hydroxytetrahydrobiopterin dehydratase" /transl_table=11 /EC_number="4.2.1.96" /note="identified by match to putative ortholog SPO3733 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(894902..895771) /locus_tag="Silicibacter_876" /translation="MTDAHSTAKHPAAIMAEVLDEIDAARTFVARDDSFDSAQALRVA LRRLRSGLTLFRPMLPTEHNKALLEEARWLAAEVTRLRDLYLLWQDTLTPARVALPDN TALQSLEVRVLNRIEKERQQLRTLLVSDRVQALIAQGNEMRDTEFWKPAAHSPEKLED LCIETLDLRLSQALKHGETLKRLDSQARDSFRKSLRKLRATAEFTQSMFPSKKTKAFL KQLKKLLDSMVAARDASAVRDRLEDLMQDMEEGSAERHIAQELIKAKEAGVGLDHKRL QKLWRATVGLPLH" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(895821..896306) /locus_tag="Silicibacter_877" /function="COG: Peroxiredoxin" /translation="MISVGDKLPEATLTRLGAEGPEAVAIQDLAKGRKLAIFAVPGAF TPTCHSAHVPSFIRTKDQFAAKGVDEIICISGNDPFVMKAWGEATGATEAGITMLADA ECSFTDAIGMRFDAPPAGLIGRSKRYAMIVEDGEVKILHLEESPGTCEVSAGEGLLDA L" /product="antioxidant, AhpC/Tsa family" /transl_table=11 /note="identified by match to putative ortholog SPO3736 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 896429..897640 /locus_tag="Silicibacter_878" /function="COG: Uncharacterized NAD(FAD)-dependent dehydrogenases" /translation="MTHIAVIGAGQAGSSLVAKLRKCGFDGEITLIGAEKVLPYQRPP LSKAYLLGEMELERLFLRPESFYAENNITLRLGTKVDAIDAAAKTLQIGDETLSYDQL VLTTGSHPRHLPAAIGGDLGGVHVVRDLKDVDAMAPAVTDGARALIVGGGYIGLEAAA VCAKRGVSVTLVEMADRILQRVAAPETSDYFRALHSAQGVDIREGVGLSHLEGDAGKV TCAVLADGTRLDVDFVVVGVGITPASELAADAGLEIENGIRTDELGRTSDPAIWAAGD CASFPYKGQRIRLESVPNAIDQAEVVAENLLGAEKAYVATPWFWSDQYDVKLQIAGLN SGYDNVVTRQGADGSMSFWYYTGDQLVAVDAMNDPRAYMVAKRLIEAGKTADKAIVVD PEADLKPLLKA" /product="pyridine nucleotide-disulphide oxidoreductase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3737 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 897637..898194 /locus_tag="Silicibacter_879" /function="COG: N6-adenine-specific methylase" /translation="MRIIAGAFRGRALASVGKGDAGAHLRPTTDRVRESLFNVLAHKM DVSGARVLDVFAGTGALGLEALSRGAESVAFVDDGRVAQGLIRKNIDLCRAGESCQIL RRSALKLGQNPAEGHDLVFLDPPYGKSLGHKALDALRDGGWIAPGALVVWEESAPMTP PQGFDLDDQRKYGDTHVTFLWSQGT" /product="methyltransferase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3738 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(898349..899164) /locus_tag="Silicibacter_880" /function="COG: Methionine aminopeptidase" /gene="map" /transl_table=11 /note="identified by match to putative ortholog SPO3761 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="methionine aminopeptidase, type I" /translation="MRSKTGRTTKDGIRIYEQADFAGMHKAGALAAKILDDIAAHVFP SQTTGEIDRIITQMVEDAGATSATIGYKGYQHASCISINHVVCHGIPGDKKLKDGDIL NIDVTVIVDGWFGDTSRMYVAGKLPRKAERLIQITHDALMKGIEVVKPGNTFGDIGHA IQSYAESQRVSVVRDFCGHGLGQVFHAPPNVLHYGRPGTGPVLEEGMFFTIEPMLNLG RAETKVLADDWTAVTRDKSLSAQFEHSVGVTSDGVDIFTLSPAGRFHPTYDKD" /EC_number="3.4.11.18" CDS complement(899348..900064) /locus_tag="Silicibacter_881" /gene="sfsA" /translation="MAHHHGMRFPTPLIPATLIKRYKRFLADCRLEDGREITAHCANP GSMMGLAEPGMRVWLEPNDDPKKKLKYGWRLVEHTNGHFTGVDTSVPNRALKAALEAH EIAEFAAYSEVQAEVKYGQNSRIDFLLTDAKLPRCYVEVKSVTLSRQPGLAEFPDSVT ARGTKHLRELAAMAEAGHRAVMLYLVQRTDCDRFALAADIDPAYAAEFETAHAKGVER LVIGTTITPEGVKIGDILPS" /product="sugar fermentation stimulation protein A" /transl_table=11 /note="identified by match to putative ortholog SPO3760 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 900167..900889 /locus_tag="Silicibacter_882" /function="COG: Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA" /translation="MPNPTAAMLVIGDEILSGRTRDANMYYLAGELAKHGVDLKEVRV VSDDAAAIVTAVKALSGAYDHVFTSGGIGPTHDDITADCIAEAFGAAIDVRADARAIL EEHYAKTGAELNEARLRMARIPDGAALIDNPVSRAPGFTLGNVHVMAGVPAVFQAMVE TVLATLAGGKPLLSQTLRVERGEGEIAATLSALAEKFGDLSIGCYPFQVNGAFGANVV VRGTEGARVDAAITELARDLGV" /product="molybdenum cofactor biosynthesis domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3759 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 900886..901611 /locus_tag="Silicibacter_883" /function="COG: Acetyltransferases" /translation="MTEAQTDPKYYDVVEATWPCLRCEKLGDITLRVGAGGGSRVSAA TCDALVSDAQIAQAEAAMQDFDQPRLFMIRDGQDALDGQLERLGYAVMDPVALWTVAP SMLTDVEIPRVTTFCLWEPLAIQREIWATGGIGPERLAIMERATRPKTSILGRWDDKP AGAAFVGMHEGIAMLHALEILPHQRRKGMGVWMMRQAAYWAAEQGATELAVLCTRANA GANALYARLGMQQAGGYHYRIKR" /product="acetyltransferase, GNAT family" /transl_table=11 /note="identified by match to putative ortholog SPO3758 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 901641..902213 /locus_tag="Silicibacter_884" /function="COG: Uncharacterized conserved protein" /translation="MTKPKEPTALDLPMADPLPDETQKYFEICQEKLGMVPNVLKAYA FNVEKLNAFTAMYNDLMLGESQLSKLEREMIAVVVSSINKCFYCLVAHGAAVRQLSGD PQLGEMLVMNYRVAPLDARQRVMLDFAAKMTRASAEIEEADREVLRSHGFNDRDIWDI ANVTGFFNMTNRVASATAMMPNAEYHGQFR" /product="alkylhydroperoxidase AhpD family core domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3757 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 902234..903292 /locus_tag="Silicibacter_885" /function="COG: Outer membrane protein and related peptidoglycan-associated (lipo)proteins" /translation="MDLKAALVALSFASMAVVLFGGAVQAATVEIPLPGAPELLRTQE TPLDTLLLPIGPVSGDDVPTRALEGRVHRRSWRIDADLSPLEVLAPIRDALTARGFEE VYACTAQACGGFGFRFGIEVIPAPDMAVNLSNYEFLSAQEPQSGTAVSLLVSRLGGSI YVQVIERHDPAHLLRPQTLPALGPSTQPVDRDTIQADASAQGAASNTENGLEQALLVD AIKKGGSLSTGALRDVLQLQGHVPLLDLEFDTASAQVGEGPYDSLKHLATFMSDHESA VILLVGHTDTVGGLQGNIALSERRAASVRERLITRYGVDGARIQVAGAGYMAPLAPNT SEEGREINRRVEAVLVRP" /product="OmpA domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3756 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(903300..903887) /locus_tag="Silicibacter_886" /function="COG: Putative threonine efflux protein" /translation="MILPLMIFLAPLAYSPGPGNLFFAAAAARLGLRATLLALAGYHI ATLIITLAIGMGGFAALAQRPMAFEIIKTTGAAYVLWLAWRFFRATPIEGDQPQSTVR FSDGVWLLLLNPKAYVIISLMFSQFLSLDAGHRWHEIWIISLVFTLNNLLAFTVWILA GTQLRRVFCHSVQARGINTAFACLLVGIAIWMLFG" /product="Hypothetical protein yfiK." /transl_table=11 /note=", Lysine exporter protein (LYSE/YGGA)" /note="Conserved hypothetical protein" CDS complement(904154..904558) /locus_tag="Silicibacter_887" /translation="MAHTGVQSPRQRRRQSVIAVIFEVTPADGMTDAYLDHAATLRPL FEDMEGFISVERFQSLTTPGKLLSLSFWEDEAALARWRKMEKHRAAQAKGRSGYFADY RLRVAGVIRDYGMMEREQAPEDSRALHDRPGT" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3588 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(904507..904839) /locus_tag="Silicibacter_888" /translation="MLTCVIRYQIDPTKQDQFRTYAQNWGQAIPRNGAELIGYFAPHE GSTTLAYGIYSIPSLAAYEAYRARLAQDPLGRENYAFAQKEKFILREDRTWLTLASNP HGSAGDRA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3589 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 905027..905953 /locus_tag="Silicibacter_889" /function="COG: Transcriptional regulator" /translation="MCDEESEMDRLTEMEAFANVVDQGGFTDAAKKMGISKSAVSKHV SSLEARLGARLLNRTTRRVSPTEIGLAYYDRARRVLNDAGEADALVTSMQSAPSGLLR ISVATDFGVNHLSPVLSDFLRDFPDITVNMVLNNRFVELISEGFDMALRIGELEDSSL RARKLTETTKRMVAAPEYLEKYGRPQKIDDLNEHKLLHYSNQSSGNVWKLTAPSGEKR QVRSTGWLSVNDGQSLLNAAISGLGIAYLPSYLYAEAKAEGLVEDVMPSLPVETLGIY AVYPPGRFTQPKVRAFIDFLVHAFAEKGMETW" /product="transcriptional regulator, LysR family" /transl_table=11 /note="identified by match to putative ortholog SPO3592 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 906133..907194 /locus_tag="Silicibacter_890" /function="COG: Dioxygenases related to 2-nitropropane dioxygenase" /translation="MTKGEAFLDRLGISLPLIQAPMAGVSTPRLAAAVTDAGALGSIG VGALDASATRKQIEELQHLTNGPFNVNFFCHQTPQRNPEIEGRWIQRSAPLFARMQAE PPKELSEIYTSFRDTDAFLEAVLDLRPAVVSFHFGLPKPHQISAMKAAGLTLLASATS LEEARQIEAAGLHGIIAQGWEAGGHRGVFEPGALDARLGLLELVAVLAEQTTLPVIAA GGLMTGAEIARALSAGAVAAQLGTAFIGCPESNADAAYRDRLALGDETVMTAAISGRP ARCLSNAFTEWASDVPIAEIPAYPCAYDLGKALNAVATAKGVSSFGSQWAGMGADRAR FMPAQALVQTLMAELAATI" /product="oxidoreductase, 2-nitropropane dioxygenase family" /transl_table=11 /note="identified by match to putative ortholog SPOA0325 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(907267..909294) /locus_tag="Silicibacter_891" /function="COG: NADH:flavin oxidoreductases, Old Yellow Enzyme family" /gene="fadH" /transl_table=11 /note="identified by match to putative ortholog SPO3586 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="2,4-dienoyl-CoA reductase" /translation="MAAYPHLLAPLDLGFTTLKNRVLMGSMHTGLEETRDWNRVAEFY AARARGGVALMVTGGIGPNLEGSVLPGAAMMTTEKDVENHSVVTKAVHEADGKIAMQI LHAGRYAYGPKCVAPSPVKSPISPFPPTELDEEGIEKQISDIVNAARLAQEAGYDGVE IMGSEGYFLNQFLVTHTNKREDRWGGSYENRMRLPVEVVRRVREAVGPEFILIYRLSM IDLVPNGSTFEEVVQLAKAVETAGATIINTGIGWHEARIPTIATSVPRAAFAWVTQKL MGQVSIPVITSNRINTPEVAEDVLAQGCADMVSMARPMLADADFVAKAAAGRGDEIAP CIACNQACLDHTFGGKLTSCLVNPRACHETELTLTPAETIKSVGIVGAGPAGLSTALA AAERGHKVTLFDAADEIGGQLNMAKQVPGKEEFWGLVDWYRTMIAKAGVTLELGRRVD AADLKDFDEVIIATGVTPRDPHIPGQDHPSVLSYIDVLRHKAPVGEKVAVIGAGGIGF DVSEYLLHEGESPAESLPLWMREWGVTDPADHRSGLAPEGPQPEAPARKVTLLQRKAE RHGKRLGKTTGWIHRATLKMKDVEFVGGVNYERIDDDGLHVSFGEARENPTVIKADNI VLCAGQVSERSLADKLAEMGITAHVIGGADVAAELDAKRAINQGTRLAATL" /EC_number="1.3.1.34" CDS 909465..909971 /locus_tag="Silicibacter_892" /translation="MSKIPAKEMTPEQIAALPYRPNVGVMMINAAGAVWVGQRMDRHK EAWQMPQGGIDKGEDARVAALRELEEETGVTPDLVEVIAESDGWLPYDLPHDVVPHFW GGKYRGQEQKWFLLRFLGRDDQINIATDSPEFSAWCWQPVEQLVDKVVPFKKEVYARV VEEFKAHL" /product="hydrolase, NUDIX family, NudH subfamily" /transl_table=11 /note="identified by match to putative ortholog SPO3585 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 911420..912016 /locus_tag="Silicibacter_894" /function="COG: Transcriptional regulators" /gene="pecS" /translation="MISTLVYLDVEIIDVCLDVKIYADIDVLRAAAHYWQMDHVDFVL EQWRRERPDLDVTAMGVIGRVSRLQLEYSKAMAKTFASFGLNGAKFDVLATLRRAGVP HCLSAGDLMKATMVASGTMTNRIDRLEADGLVTRTTNPSDSRSFLIALTDKGIALIDQ VVEAHVATQASLLEGLSTADVENLAQLLSKALTAAGRS" /product="transcriptional regulator PecS" /transl_table=11 /note="identified by match to putative ortholog SPO3583 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(910537..911493) /locus_tag="Silicibacter_893" /function="COG: Permeases of the drug/metabolite transporter (DMT) superfamily" /translation="MSAYILTSRHTSIISTSRYTRVEIMTQTRDLALTALAPAIWGSS YFVTTSFLPGESPFLVALLRALPAGILLLALVRQLPPAALLPKIMVLGALNFSVFWTL LFLSAYQLPGGVAATLGAVQPLFVVGLSGALLGTQIHSKAVAAAMLGMVGVALLVLGP DARLNVTGVLAGLGGALSMASGVVLSRKWQPDVPALTFTAWQLTAGGILLIPVAVIAL PEWPSLSAHNLMGLGYMSLIGGALTYVLWFRGIARIAPAQISLLGVFSPLTAVILGMA FANETFSIWQAIGAFVALFSVWLGGQAPRARPKSPATQVPAE" /product="membrane protein, drug/metabolite transporter (DMT) family" /transl_table=11 /note="identified by match to putative ortholog SPO3584 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(912098..914464) /locus_tag="Silicibacter_895" /function="COG: Signal transduction histidine kinase" /gene="mcp" /translation="MFRSKNMRISRKLPLLFAGFCAGTSFLLIAASLIAFNRFAERSV QDQMVSLLADRSYSVRQIISNIETDLVSLSQSPATSSALVAFDEGWEALGPDAQAALQ TAYITQNRHPSGAKHKLDRAEGEAAYHDAHETFHNGLRTLIEVKGYYDAFLINPEGDI IYSVFKELDYATNLSDGKYAQSGLGAAYRAATKAAEREVVFADMDPYAPSAGAAAAFL ATPVKGSDGSLIGVIAVQVPVDMLGVITNNSDGLGKTAQVFLVGADFKARTKSRFDGG FGVLETLPEVDHIKEALRGETGFSVGTIGLDGHPVYAASRPLGLELANWALVVEQDVS DVMAPVRQKAWALVLIGLAVCTIMSLIGWRIATSITRPLHQIAVGMDRVASGDVATTV EEAQRSDEIGDIGKSLLSLQEDLKVARDAEEQRIEQQREQEKVVENLSAGLLQLSQGD FSATIDTPFSGEHETLRADFNKTVTTLNETLGHVVTAVSRIRNGAAEINQSSNDLSHR TESQAATLEETAAALEEMTASVKSAADSARSVETITGEAKQEAEASGKVVQNAVTAMT EIEESSKQIAQIILVIDDIAFQTNLLALNAGVEAARAGEAGRGFAVVASEVRALAQRS SDAAMEIKTLIGESSKQVESGVDLVGKAGEALNMIVERVNNIAQLVSGIAEGASEQSN GIEEINTGMVQLDQVTQQNAAMVEEASAACQMLDTDASELGGVVAKFKLSGQTAQNTP TTSTAVSSAAASDSWDLDAETDETPMAPTAHGVPTSNGNAAYNFYEDF" /product="Probable chemoreceptor Y4SI" /transl_table=11 /note="Probable chemoreceptor Y4SI (Methyl-accepting chemotaxis protein)., Bacterial chemotaxis sensory transducer, Methyl-accepting chemotaxis protein (MCP) signaling domain, , belas" /note="High confidence in function and specificity" CDS complement(914812..915804) /locus_tag="Silicibacter_896" /function="COG: Sugar kinases, ribokinase family" /translation="MTKTYQLVGIGNAVVDVISQCDDSFLDHMGIEKGIMQLIERERG EVLYAAMKERVQTPGGSVANTIAGAGALGLSAAFIGRVHDDALGRFYAEAMQDDGVDF VNPPVAGGELPTSRSMIFVSPDGERSMNTYLGISSELSSADVSNAVAGQAQIMFLEGY LFDKDKGKSAFMEAARDCRAGGGKPGIAISDPFCVERHRADFLKLIETELEFVIGNED EIRSLFETDDLEAALAKTAAICPLVVCTRSGDGVTVVSQEGRIDVPVIKVVPVDATGA GDQFAAGFLFGLAEGRDLETCARMGNACAAEVISHIGPRPKADMRAVLKQAGLL" /product="kinase, pfkB family" /transl_table=11 /note="identified by match to putative ortholog SPO3582 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(915801..916844) /locus_tag="Silicibacter_897" /function="COG: Predicted EndoIII-related endonuclease" /gene="nth" /transl_table=11 /note=", [EC:4.2.99.18] , Endonuclease III (EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site) lyase)., DNA glycosylase, HhH-GPD superfamily base excision DNA repair protein, nth: endonuclease III" /note="High confidence in function and specificity" /product="endonuclease III" /translation="MTKAQILLIPLGGNASPRGKDALEMRGAHAHARRQLLQRQIATI RIDDLDSAPDHPVMVRLFIPLHGTSSSCIGSILWRRTLANVPRGGDPEPAVWPSRPMV SASFASQCAARGKCFAFLICAPVPQRAKEAPMAKQLDYHTLREIFTRFQDAEAEPKGE LDHVNVYTLVVAVALSAQATDAGVNKATKDLFKIADTPQKMLDLGEEGVIEHIKTIGL YRNKAKNVIKLSRILVDEYGGEVPCSRASLESLPGVGRKTANVVLNMWWRYPAQAVDT HIFRVGNRSGICPGKDVNAVERAIEDNIPVDFQLHAHHWLILHGRYHCKARKPLCATC IIRDLCLYEEKTL" /EC_number="4.2.99.18" CDS 917845..918534 /locus_tag="Silicibacter_898" /function="COG: Predicted transcriptional regulator" /translation="MTRSNRMFELIQILRAAPASVRAEDLAAQLEVSKRTIYRDIAAL QAMRTPVEGEAGIGYMLRKGYDLPPLNFDEEEIEALHVGLAMLMRTGDGALQQPAARV GRKICDVHASAEWLQVAPYGAPLDNPEEGCVSKAILRQAVRSSQKLHLAYVNGAGERS ERVLRPLALIYHTDCTLLAAWCELRGGFRHFRTERMMSAELLDCSFAAEADVLRKLWQ EQESNTYVYKA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3577 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 918723..919388 /locus_tag="Silicibacter_899" /function="COG: Outer membrane protein and related peptidoglycan-associated (lipo)proteins" /translation="MSFAKLPALGVLTAAVALSACDDPASYGAPGGINRSQNGAIIGG LIGAGIGAATADDDKAETIIGTAAVGALAGGLIGRELDKQEAELRQSLDNDSISIVNT GDRLIVSLPNDLTFATDSAAISSVVRSDLRKVAGSLQRYPGSIVQVIGHTDSDGAASY NYSLSERRANAVADEIAAGGVSYGRMRIIGRGEDQPVASNLTPEGKARNRRVEIVIIP QAS" /product="OmpA domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3576 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 919562..920107 /locus_tag="Silicibacter_900" /function="COG: Predicted flavoprotein" /translation="MADPVLLILSGSLRKEATNLKLAREAARLFGSAEVIEGGLNMPL YDGDLESAEGIPAVVQALADQIARADAVVISTPEYNKGPSGVLKNALDWVSRTEGNPW QDKPVAVMSAAAGRAGGERAQMVLRSFMVPFRANVLPGPEVHLAGSSKEFDDAGRLTS EQYTKTLLALMTGLRALATRA" /product="NADPH-dependent FMN reductase domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3573 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(920149..921063) /locus_tag="Silicibacter_901" /function="COG: Predicted Co/Zn/Cd cation transporters" /gene="czrB" /translation="MPFGLNTRLTASQIASGTIVVSVVVLLLKLGAWAMTGSVALFSD AMESLVNVSAAVLAWFAIRYAQRPADDGHPFGHHKAEYFSAVIEGIMIILAAVLILHQ AFATLTAGTRADLSAIGLGVNGIALVINLVWAQVLLRAGKRVNSPAFAAGGRHLMGDV WTSAGVMVGLLLVLATGWHILDPILALLVAVNILREGLHVVSDSIDGLMDKAASPDEQ EKIASVILGSGGGALQIHDIKTRRAGKAIFVEFHMVVDGEMSVAESHDICDRLEAEIE AALPGVHVTIHVEPDNKLEADGIEPPAL" /product="hypothetical protein" /transl_table=11 /note=", Cation efflux protein, Cation efflux family, CDF: cation diffusion facilitator family transporter" /note="Hypothetical protein" CDS 921983..923680 /locus_tag="Silicibacter_903" /function="COG: Acyl-CoA dehydrogenases" /translation="MPHDGQLDGQDMKPNTPLLPELLALTKEALPPLDELLERATARV RDNVSNNGRVSGALVEQHQYAAHGLAWLATYVYSLRQMHRWAEALERDAKFGEMEQLI HQIAFGEYLWQIYGGIQMNQGEVLRLQDLGLSQDDQRALMAPAVMMLTQSGNTQAARV RLVELMEQQAGSTMFGASGLDEELEMIRDQFRRYAQEKVEPFAHDWHLKDELIPLDVI EELAEMGVFGLTIPEEFGGFGLSKASMCVVSEELSRGYIGVGSLGTRSEIAAELILAG GTDAQKQQWLPKIASAEILPTAVFTEPNTGSDLGSLRTRAVKDAAGDYQITGNKTWIT HAARTHVMTLLARTDPETTDHRGLSMFLAEKTPGTDETPFPTEGMTGGEIEVLGYRGM KEYELGFDGFHVKGENLLGGEEGKGFKQLMETFESARIQTAARAIGVAQSALDIAMQY AQDRKQFGKALINFPRVSSKLAMMAVEVMVARQLTYFSAWEKDNGHRCDLEAGMAKLL GARVAWAAADNGLQIHGGNGFALEYKISRVLCDARILNIFEGAAEIQAQVIARRLLA" /product="isobutyryl-CoA dehydrogenase" /transl_table=11 /note="identified by match to putative ortholog SPO0693 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(921068..922183) /locus_tag="Silicibacter_902" /function="COG: Predicted permeases" /translation="MGGILVLLYQRPGNPAVVADVVTHPCGRALQQLVQRRQRLLGQC QKLRQQRGVGFHILSVQLSVMGHAHGPPQGLPPDRSFCTCSAILNLIWANFHSIITQR FCSAARAGCAKGSGMTDLIPFLAPAGFVLAFIIALIAGTIKGLVGFAMPMIMVSGLSS IMAPDLALAGLILPTLVTNGFQALKQGPAAAWASMKRFRTFLLVGGLFLLMSAQLVRL LPPQVMLLIIGAPITLFALTQLLGKQLVLHEASRRMEIGIGAFAGFIGGFSGIWGPPT VAYLTALGTEKKEQMRIQGVIYGLGAVVLFFAHIGSGVMRGETLPFSILMIVPALLGM WVGGRLQDRIDQKTFRRATLFVLLIAGLNLLRRAWVG" /product="membrane protein, putative" /transl_table=11 /note=", Protein of unknown function DUF81" /note="Hypothetical protein" CDS 923777..924457 /locus_tag="Silicibacter_904" /translation="MIRRALLLLSFCFLTACGATVTGTDTRILAIGDSLMAWNGLSQQ SIPDVVSKELGEPVADRSVLGARMIYRLPISGAAGLSIPKQYRGGKWEWVILNGGGND LWLGCGCGQCDRKMDKLISQDGATGAFPELVMRIRESDARVIMLGYLRTPGRSSPIEN CRDEGDLLDARLAQLAAGDAGVTFLPAADLVPYGDLSFHAPDRIHPSPKASRIIAERV AAIINAQR" /product="GDSL-like lipase/acylhydrolase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3303 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(924578..926176) /locus_tag="Silicibacter_905" /gene="pckA" /translation="MTSGRVNPNFRLEDQGIEGLGNVYYNLMEPALVQEALSRGEGNL GKGGAFLVTTGKFTGRSPKDKHVVKTASVADTIWWENNAEMSPEGFDALYADMVEHMK GRDYFVQDLVGGADPVHAINVRMVTELAWHNLFIRHLLRRPDREDLDDFIADFTIINC PSFQADPNKHNCRSETVIALNFDRKMILIGGTEYAGENKKSVFTLLNYLLPEKGIMPM HCSANHAKGNPVDTAVFFGLSGTGKTTLSADPDRVLIGDDEHGWASNGTFNFEGGCYA KTINLNPEAEPEIYATTEKFGTVIENMTFDPETFDLNFDDDSLTANMRCAYPLHYISN ASASARGGHPKNIIMLTCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPE PTFSTCFGAPFMPRRPEVYGNLLREKIAAHGATCWLVNTGWTGGAYGTGSRMPIKATR ALLTAALDGSLANAEFRKDPNFGFDVPVAAPGVAEVLLDPRRTWDDKAAYDAQAEKLV QMFSDNFEQYLPYIDEDVKAAAIC" /product="phosphoenolpyruvate carboxykinase (ATP)" /transl_table=11 /EC_number="4.1.1.49" /note="identified by match to putative ortholog SPO0709 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 926575..927276 /locus_tag="Silicibacter_906" /function="COG: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /gene="chvI" /translation="MSKIALVDDDRNILTSVSMTLEAEGFEVETYNDGQAALDAFNKK LPDMAVLDIKMPRMDGMDLLQRLRQKTQMPVIFLTSKDDEIDEVLGLRMGADDYVKKP FSQRLLVERIRALLRRQEAVATDEVGTAPETKVMERGHLRMDPLRHAVSWKGQDVSLT VTEFLLLQALAQRPGFVKSRDQLMDVAYDDQVYVDDRTIDSHIKRLRKKMRSADADFA AIETLYGIGYRYNEE" /product="DNA-binding response regulator ChvI" /transl_table=11 /note="identified by match to putative ortholog SPO0710 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 927316..929049 /locus_tag="Silicibacter_907" /function="COG: Signal transduction histidine kinase" /gene="chvG" /transl_table=11 /note="identified by match to putative ortholog SPO0711 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="sensor histidine kinase ChvG" /translation="MRDSSMTDTHRQTGRDSRRDGDLVLGDDWVAPEQTVGREMRAKR ARRGWFSLRGSPLARKIITFNLIALIILVSGILYLNSARQSLVYQRLGTLVSEAMLAT DVLEVQLFEGGEAGVTPSAEDISRTLDNISLRGGVEIFVFDTSLTLLDQQKGVMRADA LNRLNDNEGGRTLITDTLKAIWSAVGGESAPENVVAEIDLTEPQLLSLIQRALSDGTQ VGAVPDSAGGTVYAATNPILQQGQATGVLLMTSATGEIDRLVRIERERVLQMFIVALL VSIGLSLVLASTIANPLADLAEAAELGKDRDNDKVKPGRIRIPDLSARPDEIGRLSRA LRGMVKALYNRIDSNEQFAADVAHEIKNPLASLQSAVGTLRMVHREDQREKLMEVIEH DVRRLDRLVSDISNASRLDAELVKEDEEDFDLLKMLGNLNQYLGEDARGKGIDYITEL PNEPILIRGLEARLAQVFVNLITNAISFCEEGDAIRVWARRRDNRVLIVVEDTGPGIP EQALSKVFKRFYSQRPEEHFGNNSGLGLAISKQIVEAHGGVIWAENIRPTEADLTSEP LGARFVVGLPV" /EC_number="2.7.3.-" CDS 929027..929515 /locus_tag="Silicibacter_908" /function="COG: Serine kinase of the HPr protein, regulates carbohydrate metabolism" /translation="MWSVCRSERVNTASPDLDVILLHASCVALDERGVLLCGPSGSGK SALALELMARGAILVADDKTEVFRDGAVLRARAPETISGLIEARGVGLLRAETLAQVR LCVVVDLGQLETDRLPRHLKEEVLGISLPKVNRIDGAHFPAALIQYVKGGALDPETEP KL" /product="Hpr serine kinase/phosphatase domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO0712 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 929487..930389 /locus_tag="Silicibacter_909" /function="COG: Predicted P-loop-containing kinase" /translation="MTPKQSPNSETGAVTEPPLVLVTGPSGAGRTTAINVLEDLDFEA IDNLPLRLVPALVAAGGADRALVLGLDPRNRDFSTEAMVDMIDMLKARRGLKTTVLYL DADAEILLRRFSETRRRHPLSPAESPELGVSRELDLMQPVKERSDVVIDTSDLNVHQL RAEVERLFAPSGRRLAVSLHSFSYKRGIPRNVDMVFDCRFLSNPYWEPALRVHDGRDQ EVQDYVMSDARFQGFFDRVLDLTLSLLPAYREEGKSHFSIAFGCTGGQHRSVTLAETL AKALAREGQQVSIRHRELPGQQLK" /product="ATPase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0713 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 930399..930803 /locus_tag="Silicibacter_910" /function="COG: Phosphotransferase system, mannose/fructose-specific component IIA" /translation="MIGIVIVAHGGLAKEYLAAVEHVVGRQPALVAIAIGPEDDRDAK QDEICTAANSVDVGDGVVVVTDLFGGSPSNLSLRACAPANRRILYGANLPMLIKLAKS RHLPVADAVRHAMEAGRKYINSQNVNPEGGVA" /product="PTS system IIA component, Man family" /transl_table=11 /note="identified by match to putative ortholog SPO0714 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 931012..932013 /locus_tag="Silicibacter_911" /function="COG: 1-acyl-sn-glycerol-3-phosphate acyltransferase" /translation="MLKRWPPPSKPWWLTSLAKATNLAERSKMTGRVKVADTAHDNNS GMTSQDPQEGGSGEIYDRRTLTYANSFDDRWTSLAIRTLEWLTGKFTILRMVSKFEAR NADYRGNKFWRGALDVMGIELKTPEEQINNIPETGPVVVVANHPHGMVDGMIFADLIG RRRLDYRILTRSVLTGLDEAATSFMIPVPFPHDPDAQRKMVEMRAKAMAHLKDGGVVA LFPSGVVMSSDSWWGPAVEREWNVFTAQLIRRSGAKVVPMFFPGRNSRAYQIACQISP ILRQGLLLHEIVRSCNKPQAPVVGEPLTDAQMERLHSDPRGFMAWLREHTLNLGSKR" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0716 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" tRNA complement(932411..932497) /locus_tag="Silicibacter_7" /gene="Silicibacter_7" /description="RNA" /note="Created by Search for RNAs Autoannotator" tRNA complement(932907..932979) /locus_tag="Silicibacter_40" /gene="Silicibacter_40" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS complement(933255..934430) /locus_tag="Silicibacter_912" /function="COG: GTPases - translation elongation factors" /gene="tuf" /transl_table=11 /note=", [EC:3.6.5.3] , Translation elongation factor Tu, Elongation factor Tu GTP binding domain, EF-Tu: translation elongation factor Tu" /note="High confidence in function and specificity" /product="elongation factor EF-Tu" /translation="MAKEKFERNKPHVNIGTVGHVDHGKTTLTAAITKYFGDFKAYDQ IDGAPEEKARGITISTAHVEYETEGRHYAHVDCPGHADYVKNMITGAAQMDGAILVVN AADGPMPQTREHILLARQVGVPALVVFMNKVDQVDDEELLELVEMEIRELLSSYDFPG DDIPIIAGSALAAMEGRDPEIGENKIKELMAAVDEYIPTPERAVDQPFLMPIEDVFSI SGRGTVVTGRVERGVINVGDNIEIVGIKDTTTTTCTGVEMFRKLLDRGEAGDNIGALL RGIDREAVERGQVLCKPGSVTPHTKFEAEAYILTKEEGGRHTPFFANYRPQFYFRTTD VTGTVTLPEGTEMVMPGDNLKFEVELIAPIAMEDGLRFAIREGGRTVGAGVVSKILA" /EC_number="3.6.5.3" CDS complement(934544..935128) /locus_tag="Silicibacter_913" /translation="MLRTIALLALTVFVAACTPPSPDDALRDLGSFKLGHNIVVAPKV QMVPGSRPVEAQEWVDLLTNEMSTRFSQYEGDQLYHFGLSVEGYFVAPGGVPLVLSPK SVLAIKVTVWDDAANKKLNDEPKTFTVFETTSGESFLVGSGHARTREEQMLGLARNAV REIETWMEEQHKENGWFDAQIENPEENAAVAASE" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0727 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(935263..937611) /locus_tag="Silicibacter_914" /function="COG: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit" /gene="parC" /transl_table=11 /note="identified by match to putative ortholog SPO0726 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" /product="DNA topoisomerase IV, A subunit" /translation="MTDIVDDPTSPEMPANGELREPLRRAIGERYLTYALSTIMHRAL PDARDGLKPVHRRILYAMSRLRLSSSGGFLKSAKISGDTMGDFHPHGDAAIYDAMARL AQDFAVRYPLVDGQGNFGNIDGDNPAASRYTEARMTFIAEAMLEGLGEDAVDFRDNYD GRLQEPSVLPATFPNILANGASGIAVGMATNIPPHNISELIDACVHLIKAPNAADDTL LQYVPGPDFPTGGTIVEPKENIAQAYRTGRGSFRLRAKHEIEDLGRGQWQVVVTEIPY QVQKSKLIEKIAELIQTKKVPILADVRDESAEDIRIILEPKSKNVDPEVLMGLMHRNS DLEVRFSLNMNVLIDGVTPKVCSMKEVLRAFLDHRRDVLQRRSRHRMAKIDHRLEVLD GFIIAFLNLDRVIDIIRYDEDPKAALMRENWDREHPRAFTEAEYVTPAAGDGELSEVQ AEAILNMRLRSLRKLEEIELTRERDALREERAGLVELLGSEELQWKKITEQLRETKKQ FGKNYEGGARRTQFAEAGEIEDVPLEAMIDREPITVVCSQMGWIRAMTGHIDLSRELK FKDGDGPRFIFHAETTDRLLVFGSNGRFYTLSAANLPGGRGMGEPVRLMVDLPNEVEI VDLFIHNPEGRLLVASDAGNGFVCAEKDIVAQTRGGKQVLNVKDDERAKICIPVAGDH VAVVSENGKFLVFAIEEMPELTRGKGVRLQKYNMARGRQGALELDGGLADVTTFNWDE GLHWEMGGGKIRHETDLTQWLGKRAGIGKRPPYGFPKDYKFK" /EC_number="5.99.1.-" CDS 937917..938600 /locus_tag="Silicibacter_915" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MSRFVLVSFAGLALAFYELSGGADFAPPERPATDVAQEQTSTAR ERGRIVSRPAETQLANPVLTPYSAASGSVVADGGADLITAATGSRVEPAVERTGTEGA AAVSISLRDPASVASLPQPISLNLPVTGLRIASVEAGLGAITAEAPEPTRQAIEPEPI GEFRKVRASRANVRLGPGTNYPVLMQLLAGDNVRVLNDDESGWSLLENPKTGQVGWIA ASLLSAKQS" /product="Protein p60 precursor" /transl_table=11 /note=", Protein p60 precursor (Invasion-associated protein)., SH3" /note="Specificity unclear" CDS 938631..939461 /locus_tag="Silicibacter_916" /function="COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /translation="MTKTLLITGCSSGIGHAAAHDMRARGWRVFASCRQQRDCDRLRA EGFESPRIDYIDAQSIQSGLAEVLAATGGRLDALFNNGAHGLPGAVEDLPTEALREIF ETNVFGWHELIRQVIPVMRAQGHGRIVQNSSVLGLVTYPWRGAYAATKFAIEGLSDTL RLELTGSGIEVILIEPGPVTSKIRENAIPHFEKHIDWKNSPIRDRYEGSLLKRLYHSS GPDAFELPPSAVSRKLAHALEARRPKPRYYVTTPTYIAGTLRRILSTRAIDRILLRYR " /product="oxidoreductase, short-chain dehydrogenase/reductase family" /transl_table=11 /note="identified by match to putative ortholog SPO0724 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 939533..939736 /locus_tag="Silicibacter_917" /translation="MGSPLYILGILAMAAVVVVLAIGIGGFGVGGEFNRKNGNKMMQL RLFFQFVAVVFMLAFAYFAGFGN" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0723 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 939738..940310 /locus_tag="Silicibacter_918" /function="COG: Uncharacterized conserved protein" /translation="MVVLNKIYTRTGDKGDTALGNGARVAKHSARVTAYGTTDELNAQ VGVARLAAEAEMDAALARIQNDLFDLGADLCRPDMHLDETAEYPPLRIAQSQVDRLEA EIDAMNKDLSPLRSFVLPGGSALSAHLHVCRTVARRAERLTTELAGAEDVNAAALIYL NRLSDWFFVASRVANEHGAKDVLWVPGANR" /product="ATP:cob(I)alamin adenosyltransferase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0722 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 940619..941377 /locus_tag="Silicibacter_919" /function="COG: Electron transfer flavoprotein, beta subunit" /gene="etfB" /translation="MKVLVPVKRVIDYNVKVRVKADGSGVDLANVKMSMNPFDEIAVE EAIRLKEAGKADEVVAVSIGVKQAQETLRTALAMGADRAILVVAADDVHQDIEPLAVA KILAKVVEEEQPGLVLAGKQAIDNDMNATGQMLSALLGWSQATFASEVDIDGDSAKVT REVDGGLQTISVKMPTIVTVDLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVDVTPR LTVVETKEPEARSAGVIVGSVDELVAKLKEAGAV" /product="electron transfer flavoprotein, beta subunit" /transl_table=11 /note="identified by match to putative ortholog SPO0720 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 941377..942306 /locus_tag="Silicibacter_920" /function="COG: Electron transfer flavoprotein, alpha subunit" /gene="etfA" /translation="MAVLLLAEVNAGELALDATAKAVSAAKSLGDVTVLAAGASAAAA GEAAAKIDGVAKVLVAEDESLGHRLAEPTAALVAALASDYSHIVAPATTDAKNILPRV AALLDVMVISDVTAVVDADTFERPIYAGNAIQVVKSADAKKVISFRTSTFDAAGEGGA ASVETISATENPGLSSWVEDKLAESDRPELTSAGVVVSGGRGVGSEEDFKIIEALADK LGAAVGASRAAVDSGFAPNDWQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKIIVA INKDEEAPIFQVADYGLVADLFQAVPELTEKLG" /product="electron transfer flavoprotein, alpha subunit" /transl_table=11 /note="identified by match to putative ortholog SPO0719 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(942377..943213) /locus_tag="Silicibacter_921" /translation="MVEEMSYELKSADALVSELCSYGESKLRVRGPERDFGTPYISFL GGTEVFGRFVERPFTQGIESQLGLTCINLGCVNAGIDAFLHDEPLMEIAASGQMTVLQ VMGAQNLTNSFYKVHPRRNDRFLRAYDTLAHLFPEVDFTDFNFNKHLLTSLKAISEDR FERVCAGLQETWLTRMGRVVDALDGRVVLLWMRYDMSTTDVLGPAPCLVDRSMVDVLR PRLFDVIELEVTTAGQAQDIPGMIFGPMDLPAARLMIGPKEHDRIADVVASRLLKMLS TA" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 943370..944245 /locus_tag="Silicibacter_922" /function="COG: 3-hydroxyacyl-CoA dehydrogenase" /gene="bhbD" /transl_table=11 /note="identified by match to putative ortholog SPO0717 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="3-hydroxybutyryl-CoA dehydrogenase" /translation="MDVKKVGIIGAGQMGNGIAHVMALAGFDVVLNDISQQALDSALS LIQKNLARQASKGKIADAEVAAAMGRISTSLTLADVGKTDLVIEAATERETVKQAIFE DLLPHLEPHTILTSNTSSISITRLASRTDRPERFMGFHFMNPVPVMQLVELIRGIATD EETFQTCQTVVEKLGKTAASAEDFPAFIVNRILMPMINEAVYTLYEGVGSVRSIDESM KLGANHPMGPLELADFIGLDTCLAIMNVLHDGLADTKYRPCPLLTKYVEAGWLGRKTQ RGFYDYRGEVPVPTR" /EC_number="1.1.1.157" CDS complement(944325..945467) /locus_tag="Silicibacter_923" /translation="MKADALLNSYIDLNLLVCAGALLWLAARWVLRRTALATAYGPQL RLLNGMTVLLAAMPFLVVALNAIGIGHPPTLSDVLVSQYLQGNVGMSAVQFESMIGLR EDLVRDLVYGATFGSRVATVFVVIGTAVSLFLLGSAILRLHRALASAYRWKRIGRVDL LLSDDTAVAYSTRGLFRRYVVLPTSLLNDPQDLRLTLAHELQHFRQRDVEIAFLMECL RPLLFWNPAFYLWRRDMRAVREYACDQALSTKGRFDPRSYCECLIRATERARKSPVFL SPRSPSVALLERREILHTPMLARRIIAVTEQPPRGRLGLVWGGVSTAIGCAVIATAFL IQRPTDWSHDRLMLSTVVNLERMAQRSSNQVAGPQWTSSILIPAGR" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO0615 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(945457..945906) /locus_tag="Silicibacter_924" /translation="MDHCDFSPVAARTAKLGKMRKKQTHSLLTEVELEFMTVVWDLEK GSVRDILAELNKVQERAYTSVATVLKIMEQKGFLTSERVDRSLVYRPAIPKAEYQKTS LKNLSSKLFNDAPAALVARLVDDEDITDAMLEEMRALLNERLGDNES" /product="transcriptional regulator, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0614 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(946150..946428) /locus_tag="Silicibacter_925" /translation="MLSWMAWTWPTALVFIGIFSAIGVLILLEIRNPGGDARKGVLGL TTTRGDRLFISLLGTSYIFLAWLGLMGMPLWTPLGLAIAWGIFCFWKV" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0613 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(946430..947227) /locus_tag="Silicibacter_926" /function="COG: ABC-type sugar transport system, permease component" /translation="MQKRSIVPIVYILFLMLPIYWLVAMSFKTTNEILSGFSLFPQTF TLENYKVIFTDPSWYWGYINSILYVSINTVISVAVALPAAYAFSRYRFLGDKQLFFWL LTNRMAPAAVFALPFFQLYSAVGLFDTHLAVALAHCLFNIPLAVWILEGFMGGVPKEL DETAYVDGYSFPRFFVSIFLPAIKAGVGVAAFFCFMFSWVELLLAKTLTAVAAKPIAA TMTKTASSAGYELGLLAAAGTLTIIPGAIVIYFVRNYIAKGFAMGRV" /product="Maltose transport system permease protein MalG." /transl_table=11 /note=", Binding-protein-dependent transport systems inner membrane component" /note="Conserved hypothetical protein" CDS complement(947239..948102) /locus_tag="Silicibacter_927" /function="COG: ABC-type sugar transport systems, permease components" /translation="MKTENQKAWFFVLPVLLLVAFNALIPMMTVVNYSVQETFGDNVF FWQGLDWFQQILRSDRFHAALGRQFLFTFLILIIEVPLGIAIALSMPRKGFWVPVCLV LMALPMLIPWNVVGAMWNIFTLPDIGLLGYFLNHVLGINYDMTQDPVAAWVTIVTMDV WHWTSLVVLLSYAGLVSIPDAYYQAAKIDGASNWSVFRYIQLPKMKTVLTIAILLRFM DSFNIYTEPFVLTGGGPGNSTTLLSIDLVKIALGQFDLGPAAAMSLIYFAITLLVSWL FYTLMTKDDQN" /product="sugar ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO0611 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(948108..949181) /locus_tag="Silicibacter_928" /function="COG: ABC-type sugar transport systems, ATPase components" /translation="MAKITLSKLRHSYLSNPKSDSDYALKEIDLDWQDGGAYALLGPS GCGKSTLLNIISGLLVPSEGQILFDGQDVTKLPPDQRNIAQVFQFPVIYDTMTVYDNL AFPLRNRGRDEATVEQRVMAIAEMLEVTEMLNQKAAGLSPDNKQKISMGRGLVREDVN VVMFDEPLTVIDPHLKWKLRSKLKELHQRVKATMIYVTHDQTEALTFADQVVVMQLGE VVQIGTPVELFERPAHTFVGHFIGSPGMNIIPCSYDGAAKVEGHDIVLEGPVRGTPNG QTEIGIRPEFVSLSDSGLPATVTKVSDVGRHTVVECDCLGHKVNAVIEEGAAPEKGAQ THLAFRQDQTRLYVDGWLATDPE" /product="sugar ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0610 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(949191..950267) /locus_tag="Silicibacter_929" /function="COG: ABC-type sugar transport systems, ATPase components" /translation="MALELRSVTKRVGGDLHIKETSLTLEPGHFNVLLGATGSGKTSL IKMMAGLDPIASGSVLMDGQDVTRLNTQKRNISLVHQFFINYPHMTVYDNIASPLKVA GMAKSELDDRVQEAAKILQLTPMLHRRPHELSGGQQQRTALARAIAKESRAVFLDEPL ANLDYKLREELRDQLPELFAGRGAVVVYATSEPEEALLLGGKTALMRDGRVTQFGPTA EIYRNPENVEAARVFSDPPINTATITKQGFEARLGPDVRWTLDGAAASLKDGTYTIAI RPHHVTPVASSAGLVRLNGRVQVTELSGSESSAHFDLAASGQETSWVSLSHGVHPYEV GELHDFYMDPRAAYVFAPDGSRVA" /product="sugar ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0609 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(950465..952198) /locus_tag="Silicibacter_930" /function="COG: ABC-type sugar transport system, periplasmic component" /translation="MRKYLLTAVAAGAVIAATGSYADEAAAQKWIDEEFQPSVLSKAE QLAEMQWFINAAEPYKGMEINVLSEGIPTHSYESEVLTKAFEEITGIKVNHQILGEGE VVQAVQTQMQTKRNLYDAYVNDSDLIGTHSRLQLAYNLSDMMEGDFKDVTNPGLDLDD FMGTQFTTGPDGDLYQLPDQQFANLYWFRKDWFDREDLKAAFKEKYGYELGVPVNWSA YEDIAEFFSEDVKEIDGTTIYGHMDYGKRAPDLGWRMTDAWLSMAGAGSKGEPNGVPI DEWGIRMEEGTCNPVGASVTRGGAANGPAAVYAIRKWDEWLRKYAPPGAASYDFYQSL PALAQGNVAQQIFWYTAFTADMVKPKSEGNNTVDDSGTPLWRMAPSPHGPYWEEGQKV GYQDVGSWTFLNSTPLDRAQAAWLYAQFVVSKTVDVKKSHVGLTFIRDSSVNHESFTE RAPKLGGLVEFYRSPDRTAWSPTGINVPDYPKLAQIWWQQIGDVNSGAFTPQEAMDRL AQEMDITMGRMQRADEQANVYGGCGPRLNEEKDAEWWYANGGAKPKLENEKPQGQTVN YDELVARWAAN" /product="sugar ABC transporter, periplasmic sugar-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0608 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 952474..953595 /locus_tag="Silicibacter_931" /function="COG: Predicted N6-adenine-specific DNA methylase" /translation="MMADTSFEIFLVAPPGLEHVLCEEAREAGFEAARQVAGGVSFEG TWEDVRRANLVLRGATRVLARIGSFRAFHLAQLDKRARKFPWGDVLRKDVPVKVEVVT NKKSKIYHAGAATQRIETAITEELGAPIAPDAPVTLKVRIDDNTCIFSVDTSGEGLHK RGHKVAVGKAPMRETLAALLLRACGYDGSEPVVDPMCGSGTFVIEAAEIASGLTAGRS RSFAFEQLANHDATAWTDLKASMPEAVPTVCRYFGSDRNTGAIEMASQNADRAGVEGI CHFTHAAVSDLQRPEGPAGLVMVNPPYGARIGNKKQLFAVYGAMGEVLKTRFSGWRVG IVTSDTALARATGLPFLPVGAPIAHGGLKVRLFQTAPLP" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0322 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 953708..954508 /locus_tag="Silicibacter_933" /translation="MQQASDFLEESQILARCLEAAPDRIFATKTQFKSWTVDDILGHL HFFNAAAEAALAGADAFDAMMAPAMERFSSGGKILDLQFPWLGDLQGRALFDAWQQGA ARVAEAYEAADPKARVKWLGPEMSALSSITARQMETWSHGQAIFDLLGETRHESDRIR NIAHLGVATFGWSFRVWGQDVPEPAPYVELTAPSGAIWSWNAPQEANRVTGSAVEFAQ IVAQTRNWKDTAVKANSEVAQRWMQQAQCFAGPPNSPPAPGTRFCAPS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0581 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(953606..953716) /locus_tag="Silicibacter_932" /translation="MLHVALPLALLASQESRADLSLQAAIFCVTQRMVRG" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(954542..955348) /locus_tag="Silicibacter_934" /translation="MSQLAETWFAFDQTHRPARLWRMRNASADGTVHIAHSLDEAREI AQDASLVTHAASDGLALTLPAATADLRLAPKDGVLRLAAMAQTKPHAWLSAACVRIKG FLELNKDWDGVLCLPGFDTTYWVLISANEVVSALGFVTSPLVEALSPVALDTEIDRDA LLAPLQDVMSKPEALALRLAESRSQWQNTALNDAGAHSQIWGAALGAELAAARAYWLG QNIALIAPSALTAPYKAALASQYVPFTEADEAQMTLKGFASAYAAYTQST" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 955678..956838 /locus_tag="Silicibacter_935" /function="COG: AraC-type DNA-binding domain-containing proteins" /gene="oruR" /translation="MGYAYLRGLRNARLQNNNDETSTVFRSCSVPTFQKMRSAYGRRV VKDVFAPNGGVFINRLVEYVTGQGHDFENMLAQKLAISEPLSSSAQVLPVYEHSLVFG LAERVCNDTSIGYALAYQCTLRDAGLVGYAVSASETAGEALYTLSRLSNVFEVVSASA SGGLVDLRWDFGSQGKLDLRHWSEFIATLLVRSLKTLCTGAVAPVGVEFTHTAPSSSE QAVLAFGVKPTYRGRLNRLTFREQDLRQPLRSADAGLLRLLLEHAELLRRRPDRNSND LSITVERLIMDGMSEGDASLAQVAESLDMSQRTLSRKLASEGTSFFAILEGVRKSLAL RYLQQNEKSLSEISFALGYSSLSSFNDAFRRWYDQSPGSYRSDALKEAAVKS" /product="Ornithine utilization regulator." /transl_table=11 /note=", Helix-turn-helix, AraC type" /note="Conserved hypothetical protein" CDS 957209..957922 /locus_tag="Silicibacter_936" /function="COG: Sugar transferases involved in lipopolysaccharide synthesis" /translation="MKTLDHGALRRPTGRDFPEIALAEALREVGPIYSHGGYAAFGKR ALDIGLVLLALPIALPLLLACVVALWFESGSPFYRQKRLGKDGRVFSMLKLRTMVPDA EALLQWHLARDPELRREWERDQKIKDDPRVTRLGRMMRVTSLDELPQLWNVLIGDMSL VGARPMMVDQLSIYGKADAYFALRPGITGPWQVGERNETSFADRARIDEAYCRNLSFK EDLNILFRTLGVILRSTGY" /product="bacterial sugar transferase" /transl_table=11 /note="identified by match to putative ortholog SPO0838 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 957999..959264 /locus_tag="Silicibacter_937" /function="COG: Signal recognition particle GTPase" /gene="yveL" /transl_table=11 /note="High confidence in function and specificity" /product="exopolysaccharide biosynthesis domain protein" /translation="MKDYVDRDGENIASVLCLREDKETRMTDHGFRKFRRRRKREETP AQDVVRSAPTSEPSTADRVSVNRPSADRAPADQSTPSVKEASAPVTPVRPTRPSRPSP AKVETDVHAETRESLTARRSARRFQPADDDTSVAASRVARQPASRESRPEQDASVTPA AQIDIAPPLQREANASLPAALPDPWHIMRHVEVTGLNERRSRLPLVDFFRSSPTARAF DLLRTRMLHSLRAHGWKRVAVCGPTPGCGASFTAANLALSLARVPNSRTVLMDMNLRN PGIARSLGLERSALYNGDMLGFLRGEIRLEEHLVAASDRLALGLNTSTFHNAAEVLHE TRCASIIDDLVERTRADVVLFDLPPVLHNDDVAAFLPQVDGVLLVSDGSQTTARHLKA CEKMLAGHTQLLGVVLNRARNEDEFSGGA" /EC_number="2.7.1.112" CDS 959298..960572 /locus_tag="Silicibacter_938" /function="COG: ATPases with chaperone activity, ATP-binding subunit" /translation="MASIYSIADFIDMLRRRVSLIVVVTFLGCVVSVWLALQKQPIYS STEVIQITRPKIAGDLARSTAEGSSARRIQLIEQQLMARGTILEIVDQLDLFADRPGL LDSEIVPLMRNSVSLMGTAAAREGGSDDGAISVLTITANMPTREQAQAVAREFSKRTI ALSQNTRLAEARETLLFFNEKEAALVRDITALEEEIANFRHENAVTLPGAIEMRGAEI TAINESLLELARQEIELRKGAEEAEATQREAYARRVREEFDAQLESLTAQRQLLVDRR AELEASLELTPDVDRQLASYERRQQQMQSELEVITARRAEAEVGFRLETASQGERLRV IEPAPLPDYAMGGGRKSLAIKGALASFVLGVLAAFALDLRHPVLRSSGQMKRETGLSP VVTIPVLTTRKKGLFARLFALGGRGTERHARS" /product="chain length determinant protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0840 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(960581..961996) /locus_tag="Silicibacter_939" /function="COG: Membrane protein involved in the export of O-antigen and teichoic acid" /translation="MTSCQRGLSLGTTLNGSTWIPMTLSTTNQSLMARVVRSTSWIVL GFGTGQILRLGSNLLLTRILFPEAFGLMALVTVIIIGLSLFSDMGISNAIAQNPRGDE PDFLDSAWTVQIIRGGLLWLLTCALALPAASFYDAPELAYCLPIAGFSLVLQGLLPTR VETAYRHLLVGRVTAINLMAQACGILCMVTLAIWTQSVIALAIGTVVQEGAKLAFVHW TLPGRRNSLRWEPAATHELIGMGKWIFLSTACFFLTTQGDRAILGKYLSLEAMGIYNI AFFLANFPVQLGQDVNQRLMIPVYRDKPALESDENRRKQRQLRYALTGGILSILWLMA WIGPWLVELLYDDRYAAAGPVIVLLASSLAPSIIVLTYDRAALAAGDTKRFFFYTATR AFVQTALFLAGVTQFGLVGGIAAMGLAVFCSYPTLMRHTRPYRAQDPGHDLVYLTASL VMCGSALWYHWPKIAASVGVM" /product="polysaccharide biosynthesis protein" /transl_table=11 /note="identified by match to putative ortholog SPO0841 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 962138..963352 /locus_tag="Silicibacter_940" /function="COG: Glycosyltransferase" /translation="MKIAYVLNTYPQPSQSFIRREIQALERRGITVVRLAMRATDQAL VDPGDQAEAAQCHYVLAAGAARLVLALLACGLRAPLSGWRAFLLAMRLGRAQSKRLRH LIYLLEAAYVTRVTARVGCAHLHAHFGTNATTVALLANALGAPGYSFTTHGPEEFDAP HALSLGEKVDRARFAVAISSFGRSQLSRWAAYGAWPRIKIVHCGIEPARFSAPAPVPE GPLRLVAIGRFVEQKGLMVLIQALALAVRAVPDIHVSLVGDGEMRADLETAIKAHGLY ENVTLTGWLSEAGVRTALVESHALVLPSFAEGLPMVVMEAMASGRPVLATYVAGTPEL VVPDETGWMVPAGDAQALADLMVEVAALPRTQFEQMGQKARSRVLERHDIDREAEKLA QHFADAIAENAE" /product="glycosyl transferase, group 1 family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0842 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(963363..964205) /locus_tag="Silicibacter_941" /function="COG: Glycosyltransferases involved in cell wall biogenesis" /translation="MTAPPQRRISILIPAHNEADYIGDCLTALYASEILGHEIEVLVL ANGCTDETVARTREIPAPEGWRLRILERAEGGKLAALSEGDRAATGDILVYLDADVQV ETDLLAQIAEALGKGPALYASGTPCVVPAQSAITRAYARAWVRLPFVRIGTPGFGIFA MTRAGRARWQDWPAIISDDTFARLNFRPEERIRLPGRYHWPMVEGFRNLTRVRRRQDR GVEEIKELFPQLLQNDDRRPSSAHSLARVALTRPLDATVYVAVALAVKTNLFASNVVW TRGR" /product="glycosyl transferase, group 2 family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0843 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(964202..966739) /locus_tag="Silicibacter_942" /translation="MSTEALITAVMMIGHSLIGPENPRMLQQLLQAGQENRPVVEFQI INGAPLRYNWEHADKAQGVNARTRLAEAPVDALIVTEAIPLANHLRWSDTEGAIEKFY SVAAQSNPNVTLYVQEGWHSLLSGTGEEVPFDDGGDVAWRSRLDNDLPHWQGVVEKVR SNTGGDIRLLPTGQALGRLADAIETGTVPGLSRINDVFSDDIHPNDIGFYYLALVQYA VLTGTSPEGLPRVLKTEWGTPYKAPSADLALRLQEIAAGAATGSQARMTLPPDPVALP LEPGPAILNDETSVAALPSGKPIVRKQPIAMNLAAIRDWSPQAPFLDHFKTARAWIGH LPGRWGGVTEEELRAAGYLDPDGWPLAIPPELGSIGTVLLNDLPETANSLSGRYVVRF DGKGIVEAGGRAKNVRYGKNQVSFDFEPGPGAVDIRIQRSDRAGTGDYVRNITVVRER DLPAYDQGALFNPDWLDRIEGFAALRFMDWMDTNNSDQIGWEDRPRYRDYTWSTRGVP AEVLVTLANRVGADPWFTLPHMSDDTYVRNFATLVRDGLDEDLKAYVEYSNEVWNWQF QQAQWADKQAQEAWGKDGLWLQYYGARSAEIAEIWTEVFAEGTDQVQLPDRLVRVMST QTGWLGLEEQILTAPLWTAEDPDRQPPYRSFDAYAVTGYFGASLGMQEQAPMVRAWLA DSRERARDAGVQNGLRGAALAGYVEDHQFDIATAQALVELQDGLNSGSQEGALNDLLA RILPYHAKVAAEHDLELIMYEGGTHVVGHGPLVDDDALTAFFTHLNYSPEMGELYRKL LNAWPDIGGTLFGAYSDVSVPGRWGSWGNLRTLSDKNPRWDVLEAAR" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0844 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(966736..967701) /locus_tag="Silicibacter_943" /translation="MMNRLRHLPRRALLLICAALPVGALTLWSLGSRGSSPVEVPPLP APQAPLTVYHLGHSLVGADIPHFLAQFAGSGHAYNVQRGSGTALRAHWEESEPILDFD KVNAAPIWRDPKEALSTTDYDAVIFTEMVELRDAIKYFDGARYLNRWADLARKGNPNA RLYLYETWHRLDDAEGWLNRIDADLEALWLDELAARDDRAASDQPLYLIPGGQVLAAV TRAAEAGEINGFSDREALFDLLPDGTRDQIHLSPLGAYIVALTHYAVLYHRTPEGLPH RVALADGTEFKALDAETARQLQSIVWRTVTHLPRTGVASAKSEAS" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0845 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(967698..968408) /locus_tag="Silicibacter_944" /function="COG: Phosphopantetheinyl transferase component of siderophore synthetase" /translation="MIAPRPAPQDISQQRQHALRQLLSDPIAIATCDPHGDLPEPFAE ESACLSPNAVEKRRREFAAGRASAHQAMRALDQPCAPILIGPKRAPLWPEGLTGSITH CASCAMAAVGFTRDFTGIGVDVEEDTPLSRDLWDSIASPAEQTWIAAQPDPGQAGKLL FSAKEAAYKAQYSRSERFFGFSGLELVFDTNKGQFTACFTSDQLPYRSGDLLRGRFAI TTGVIITAVEISKNELCP" /product="phosphopantetheinyl transferase PptA, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0846 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(968405..972964) /locus_tag="Silicibacter_945" /function="COG: Non-ribosomal peptide synthetase modules and related proteins" /translation="MTISTVVIGNESLLIGCCEALLARGHDIRAVVSTDAEITSWAAS KGLNTHSKPLEIDIEFDWLLSIANLQVLPEAVISKARLGAVNFHDGPLPDRAGLNTPN WAILEGAEEHGITWHLIEGGVDEGDILAQRRFAIAPDETAFSLNSKCYGAALDSFGEV LEQLESGALERTPQDLSHRRYHARKDRPDAAGFLRFDRNRDTLLCLVRGLDMGGYWNP LTTAKIRLPGQVAAVGAAQATEGEGIPGEVLAVSANALTVACADGAIELRDLKTLSGG ALQPSALLEVGDVLPTLSDQEVEALNAAAQTCQKAEPYWRRSLAEMLPLPVPLQGAEL DVEATADIQLPTDCAPQTLMAAMLAWLLQSLGETAGSIALSLPDLQTSDDLGVLSNWV PLSAEIDEKIKTVEARAAEVLDRLDNMGGFATDLILRAPEVTIETPPEVALCLGTNLA PAQAKLALIQSDSRLQLRSCQLSPEALSMLAARLQCLLNTLPEDGAATLSTLPMLPDS ERTRLIETWNDTGCDYPTDQTIHAAFEAQVARTPDAIAVVFEDQQLTYRALNQRADAL ARHLHDLGAKPGSHVGVYLRRSMDLVIATLGILKAGAAYVPLDPTYPADRIAHYITDS QAAVIVTHESLAAELPESDARQLHLDALDLTTEADPIRAGAAEDLAYLIYTSGSTGLP KGVMVRHRNVANFFTAMDARIPHQPGDAWLAVTSLSFDISVLELFWTLARGFKLVLSS DESRLQLANGPIGLSDRKMDFNLYYWGNDDGAGEKKYELLLEGAKFADAHGFNAVWTP ERHFHAFGGPYPNPSVTGAAVAAVTRNIGVRAGSCVAPLHHPARIAEEWAVIDNLTGG RAGIGFASGWQPDDFILRPENTPPANKPALFEALQTVRKLWRGEEVAFPRADGGQHSV VTQPRPVSEELAVWVTTAGNPETWREAGRVGANVLTHLLGQSIDEVGDKIALYHAALR EAGYDPADFTVTLMLHTYLAETREAAREVAREPMKDYLRSAAGLIKQYAWAFPAFKRP KGVDNPFEMDLGSLSSEELEAILDFAFERYFEESGLFGTVDDAVARVEDLKRIGVDEV ACLIDYGIAPHVVLEGLKPLAEVLRRSNRVQELANDDFSLAAQIVRHGVTHMQCTPSM ARMIASDADASPALGRLRHLLVGGEALPGDLVAALREQTRATLHNMYGPTETTIWSTV ETLERAPTGIAPIGTPVANNSVYVLDAKGQLAPVGAAGELYIGGAGVTAGYWRRDALT AERFPDDPFLSGQKMYRTGDLVRWREDGKLDFLGRTDHQVKIRGQRIELGEIETALTA VEGVTAAVVIPRKVGSDERLVGYVTASGVFSETEAKAQLSRQLAGAMVPSHIVVLEAF PLTPNKKIDRKALPDPTPSRQEAHVISAEPQSPVQQKISEIWKALLGVPAVGKSDNFF ALGGHSLLAVQAHRDIRSALEVERLSITDIFRFPTLDGLASHLEHLQTGDTTVAETSP AAPAGRADTMSKRRAMRANRKARSG" /product="non-ribosomal peptide synthetase" /transl_table=11 /note="identified by match to putative ortholog SPO0847 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(972961..973983) /locus_tag="Silicibacter_946" /function="COG: Predicted glycosyltransferases" /translation="MARNTILTIILNFRTPAMTLKAAEAALEEMEDLPGEVLIIDNGS GDGSFEALQAGAAARGWLDSGRLRIEASPVNGGFGAGMNIGFRALLSDGTRPDFFYLL NSDAFPEQDCISTLRDFLLKTSEAGLAGSYVHGEDGTPHCTLFRFPTIASEFEGAART GFISRLLKHAIVPLDIPSAVQQVDWTAGASMMIRRNVIEAVGGFDETFFLYFEETELC HRAARAGWRTYYVPHSTITHVGSASTGMKTWARTPEFWLDSRLHYFTQSHGALYAVAA TCARLLGGSIYGLRRLISDKPRADAPHFYGDLTRHHVKRALRPRPAPRPARPFAPDPV LEDNKS" /product="glycosyl transferase, group 2 family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0848 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(973987..980439) /locus_tag="Silicibacter_947" /function="COG: Polyketide synthase modules and related proteins" /translation="MDKKTPNDAFSPDDIAVVGMSVALPGAASVQEYWTNLRDGIESI QSVDEDSLLSAGERAETLRDPNYVPSCAPLDGFDEFDAEFFGFSPKEAAILDPQHRKF LEVAWGAMEDAGHTPESLKGQVGVYAGCGMGSYFYFNICSNPDLVDDVGMFLLRHTGN DKDFLTTRVSHVFDLKGPSVNVQTACSTSLVAIHYAAEALRNGECDMALAGGVTIELP QGRGYLYKENEILSPDGHCHAFDHRAQGTVFGSGAGAVALRRLGDAVADGDHIWAVIK GSAINNDGAAKAGYLAPSVDGQSAAVRKALTAARVNPETIDYVECHGTGTYIGDPIEV AALTEAYRDGTDAKGYCRIGSVKTNIGHLDTAAGVAGFVKTALALEHKTLPPSLGFEK PNPTIDFETSPFQVNDALRPWMSHKGPRRAAVNALGVGGTNAHAILEEAPVRAASEES DFPFQVLCLSGQTKAALEANTQNLIAYLRANPEVELADVAFTLKEGRRGFAKRRVVVA ETATEAADKLEAANPREVFTHDHLGPQPETVFMFPGGGAQFAGMARDLYETEPVFADW MDQGLDHLEKSLDFDIRALWLPEPGEEASANAALLKPSVQLPLIMIVEYALAQLWISW GVRPAAMVGHSMGENTAACLAGVMRFEDCIDLVQLRGRLFDTIEPGGMLSISLPLAEV ETLVGEDLDIASVNAPELTAVSGPNDRLDALSEQLRARGVEFQRIPIDIAAHSRMLEP ILGAYGDFLRRLDLQPPTLPVMSNRTGQPLTAEQAMSADYWVEQLRNTVRFADCIETL GATKGRVYLEVGPGKALSALAQMSPEVAPGQVLSSLRHPDQDIADDAYFFGVIGRLWA CGVEADWPQVWGDAQRNRLSLPTYAFQRNRYFIEPGKSVQQPEAALPEHHKDMADWGY RPAWRPRLADCALDIENDLALEPHSWLIFEDTTGQGAACAEALLAAGHRVARVRAGDT YAQLAPDLYQLAPEEGRFGTEALLADLTEAGYFPDRIAHFWLVTETEEYRPGSSFFDR NVEMGLMSLTALGQALAQADLPHSVHLSVMTTGAMQVHGESLPYPEKAMISGPAGIIP REIPGVTVATCDIELPQAPTGWNALLGGSAPACITTRLLEELLAMPGNHSAAWRGEKR FELDYRPLPLSEPDARDLPLKKGGHYLLTGGYGGIGLTIAEHLMRTYEARVTLLSRET LPPRADWGRELRRRSPSDRIAQRIRAVQKLEATGRGEVLTLSADVCNLQEMRDAAEAA SAAFGPISGLFHGAGFIADAPLLAKTDRQIAEVLAPKVSGLRVLDQVFPDGTIDLMVL FSSSSTVTRPAGQVDYVAANEFLNAWAKSRQGAQTHVVALDWGIWADTGMAADAMAAR RGSAAPSEPQPSEAALWQTQGFDRNGTPIFKSRFEADKHWLLDEHRTKDGRALIPGTG NVELIAEGLTALDVSPPFEIRDLYFLQPFVVEDGSPREAVMHLAPTQGGYDVQIHAET SEGYARTAEAEVVSRALDAETPQLSLEAIAARCTPKAADPASERLTSPQEANLRFGPR WHVLQSMALGRDEGLAKLSLPDLADQDGTLLHPGLLDLATGWAIELAPGYEPSTLWVP VSYGSIRVHAPLVKTVFSHVRLAQEGGERGSVLFDITLCDETGNVLVEISHFRMQQLS GGFDLLPARTDTTAAALGLTSEAEIQPLSPDERRLLANLENGIRSEEGGAALERALAA KQPQVIVSSLDLSALRAQAENGAEITSESEGQSFERPDLDTDYVAPSTETEETLAGHF ASLLGLSRVGVEDSFFDLGGHSLIAVRLFAQIKRSFGVEFAMSVLFDAPTVGALAQRI DKEAGPPAVTVTSTSDTETTTPQSYSHLVRLAPGENGEAAPMFIVAGMFGNVLNLRHL AQILGEDRPVYGLQARGLIGADEPHERIEDAARDYIAEMRLVQPEGPYLIGGFSGGGI TAYEIAQQLKASGDAVDALVLLDTPLPVRPDLKPIDKTLIKIAEIRAKGPGFVTEWAR NRIAWEIRKRQSRPSEGAENAGFNNRKIELAFLRAVASYTVQPWNGPVTLYRPVLDQH WKVSGGQWVSREREYVYPDNDWKQFAPALDVCEVPGDHDGMVLAPNVSVLGKKIRDLL AATNSRATRPHDSSKAAE" /product="non-ribosomal peptide synthase" /transl_table=11 /note="identified by match to putative ortholog SPO0849 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(980628..982070) /locus_tag="Silicibacter_948" /translation="MLLVWPVAVLVFFQRLPLQRAILLCLIGGYLILPPVAAFDLPLV PDLDKFSISSIMALVGCVFVAKAPVPFLPSALFLRILVIVFVISAIPTVLTNSDRILF ETLQDAAPIIFYHSELPGLRWRDMGSVMIGQVIVLIPFFIARRHLSTPDAHRELLLAF CIAGLFYSIPSLIEIRFSPQMNVWIYGFFQHDFAQMIRMGGYRPIVFLPHALWLALFM FSALIATVSLARVAESGSRARLYVAAFYLFCMLVLCKSMASLAYGLAFTPVVALASYR LQVKLALAIALIGCIYPILRNAHVIPLETVLTKIEEFSPDRAQSLGYRFENEEVLLER AAEKPVFGWGAWGRNLIRDENDGRILSIPDGRWIITFGSFGWVGYLAEMGLLTSTLAL LYWAMRRQETSRISPHVSCISLILGATMIDMLLNDTLVPVTWMCAGAILGYAERELYP RSFAPRQALFGGRQALDMPATKGQSHPVMD" /product="membrane protein, putative" /transl_table=11 /note="Hypothetical protein" CDS 982266..982988 /locus_tag="Silicibacter_949" /function="COG: Teichoic acid biosynthesis proteins" /gene="tagA" /transl_table=11 /note=", Probable UDP-N-acetyl-D-mannosaminuronic acid transferase (EC 2.4.1.-) (UDP-ManNAcA transferase)., Glycosyl transferase WecB/TagA/CpsF, Glycosyl transferase WecB/TagA/CpsF family, wecB_tagA_cpsF: glycosyl transferase, WecB/TagA/CpsF family" /note="High confidence in function and specificity" /product="involved in polyglycerol phosphate teichoic acid biosynthesis" /translation="MLKAKISNRFHERDGFALATINLDHLVKLGHDQAFLTSYQAQDF IVADGRPITWLSYLANQPVDLMPGSDMVTPLAELAASAKAKVALVGSSEAVLQKAGAE LSRRVPGLEVVYVRAPSRGFDPFGAEARGILQDLDAQDIGLCFIALGAPKQEHFARLG RELAPRTGFASIGAGLDFIAGAQRRAPRLMRKLALEWFWRMLSNPLRLMPRYIKCILI LPGQVVHALRLRMDASAARREI" /EC_number="2.4.1.-" CDS complement(983056..984054) /locus_tag="Silicibacter_950" /function="COG: Glycosyltransferases, probably involved in cell wall biogenesis" /translation="MRTAPPSQCDTRPSGPLRVDAIVIGRNEGTRLLACLDSLAGQVQ RIIYVDSGSTDGSVAQAEARGAEVVALDMSRPFTAARARNAGLQHLGVSGTPGLVQFI DGDCVLDTGWLAQATDFLAHHPDVAVVCGRRRERAPEASVYNWLCDQEWNTPVGETRA CGGDALMRRDALLAVGGYRDTLIAGEEPELCVRLRHAGWRVWRLDHEMTLHDAQMFRF SQWWNRTRRAGHAFAEGAFLHGAPPERHWVTETRRAIVWGALLPLLILLSAVVSPLLA AALALLYPLQFLRLSRRMRPIAAFYSVLGKCPEALGVIEFHLNRLRGSQRDLIEYK" /product="glycosyl transferase, group 2 family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0853 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(984058..988065) /locus_tag="Silicibacter_951" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MKQNLQSLIFTCGLATCPVLTPLPTLAQDASESGGLLVSFLEDT LSGDSRTVSVEGLEGAFSSQAKIAKLTVSDAEGIWLTVEGAELDWNRLALVRGRFSVN HLKADRITVARSPEPVPADPELPMPEATPFRLPELPVSIEIGDIAAGEIRLGEALTGQ AASLSVDGALTLADGALETDLNVARLDRRGDALHLAASFSNTTEQLALDIALDEAPGG LLSTAMDLPGRPDLRLAIKGEGSLTDFTADIGFASNSHDRITGTVSLRGLGDVDSDTD AGLAFSADIGGDIDPLLPPAYRPFFGPGMRANVKGRSLSSGGVELDNLVLRTRALQLT GALRLEAGMLQTANIKAAITAPEGQAAVILPVSGADTTVAAVTMDLKKPEGENWTINA ELDSLRTADLSIKRAVVNAAGALDQDAGFNLDGALDARLSGFVLSDPALAAATGSKLS LSAQLTTKDGADFLVRDLELQGDSYSARGELRFDRLEGDLRIATTLSLLAENLSRYSV LAGLDLSGSAEADVSGHFQPLSGAFGVDLALLGRDLGTAIPNVDPLLVGESRLKLVAA RDTAGIRIDQFHLQTAEVSATGQGTLDSGEGALRLDATLARLDRFVTDLPGPLTLSAN FDRSGNRLDGTVALRGPQKTAMDLDGSFTLDGAADFGFEAFVGAPEAFVPELAGAPVI ATGTATRRAAQWTGDMTLTATGGTRARIKGGFHEADGAIDLDLSALLARVEQFAPAIT GQATARLIASRRDGQWQAKGDVTAPGDTTATFDAGFVETSGDLDLKLKAEVAEVRAYA PTLPGRASADISATRRAGAWAAGGKVTGPAGTAADLDVELSETDGTARVRFDALVREL QQIVPGLDGALSAKGEARRADGIWTVESTADGPLGMASRLAGTWDEARAIADVSAKGT LRLEGANAFLKPNLIKGLAEFDLALRGPAQLNSVSGTITTSGAQMVLPQAAQTIEGIS TRISLNSGSAAVNLSARPRDGGRIEVNGPVSLAAPYAGDLRISLADVVLTDNLSFDTS LGGQLRFSGALAGNSRLSGRIDIGETNFNLNTAGGAVSAAPIPPIRHVGQTGAQIATR ARAGLIETGSAASKSNSNIALDVLISAPNKIFARGRGLNAELGGTIAVGGTTANLAPS GQVGLIRGTFDILGRRLNLDEGRVTLLGDLKPYLEFVSSANTEQGTATLSIAGPLDGP QIKVTSEPPRPSEEALALLLFGDNIQDISPLALARLASSALTLSGRGGGANKALRDST GADNADIGIDNLGVGQLGLGGYLADNVYTDVNVTAEGNSELSINLDLTKSLTVAGKAD SEGETGLGVYFKRDY" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0867 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(988062..989894) /locus_tag="Silicibacter_952" /function="COG: Outer membrane protein" /translation="MFRFCQLRRTAFPLCRTLRPLSLALSLSVALSASPLSALDANLA APKAPDDLAERLRGASAALGLSQNSETQEIIAASLSDYRTLVQVLYDAGYFAPVVNIR LDGREAAAINLLNPPKRVQNIAITVDPGPAFTFGRTVVTPLPAGGTASLPEGFATGKP ANTGAIQEAANAGLGAWDRAGHPKVELAGQSITANAVKRRLDAELRIAPGPRLRLGNL RITGESDVRPQAIQRIAGFAKGQTYHPDLVSKAANRLRRTGAFSTVALRQADVPNPDG SLDFIAEVEDLPKRRFTFGVEISSSQAMELSTSWMHRNLFGGAERLKIDFSVSGIGSS DINSSITARLDRPAALGTDRNLFYLASIEQLREEHYTARSALAAVGVRRIVSDTTFVE GALGLRYINADDAYGSNREFKYVAARLRGEKDMRNIKTNPTAGYYLDGEIVPFVGVSG GDPGVQINIDARGYKALGNSDRLVLAGRVQLGSIIGPDPSDVSPTFLYFSGGAGSVRG QEFQSLGVDTPGGTAGGRAYLALSGELRGRITNAISLVGFYDVGFVDKDSFISGDSEY HAGAGIGVRYDVTGVGPIRLDLAMPVAGDTEDGLQFYIGIGQAF" /product="outer membrane protein, OMP85 family" /transl_table=11 /note="identified by match to putative ortholog SPO0868 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(990065..991054) /locus_tag="Silicibacter_953" /function="COG: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase" /gene="gap-2" /transl_table=11 /note="identified by match to putative ortholog SPO0875 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="glyceraldehyde-3-phosphate dehydrogenase, type I" /translation="MKIAINGFGRIGRTILRQILTSPRGSGIEVVCINDITDAEMCAY LFQYDSTFGPYPGEVSLEAGTLCVDGRRIALHQEANVTNLDLAGVDVLMECTGIARTT DLAQRGLTAGARKVLISGPSPAAEVTVVYGVNDADLAGAQIVSNASCTTNAVAGLVQL VDAVAGIETGHMTTIHCYTNSQPMVDTPRGDFARSRGGAQSMVPTTTSAMHLIDVVLP RLKGRISGAAVRVPTASVSAVDLVATLQSEWDQSDLLMALKASANGSPILGWTEQPLV SSDLRARPESLIIAAPETRMVGTQQLRIFGWYDNEWGFSARMLDVARAMQPQV" /EC_number="1.2.1.-" CDS 991517..992641 /locus_tag="Silicibacter_954" /function="COG: Glycine cleavage system T protein (aminomethyltransferase)" /gene="gcvT" /transl_table=11 /note="identified by match to putative ortholog SPOA0057 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="glycine cleavage system T protein" /translation="MSDLKTTPLTELHESLGAKMVPFAGYSMPVQYPLGIMKEHTHTR EKAGLFDVSHMGQVILRGESYEALAAAFEKLVPMDVLGLSEGRQRYGLFTNDTGGIED DLMFANRGDHLFVVVNAACKDADIARMKAALEPEVTVEPVTDRALLALQGPAAEAALE ALVPGVAAMKFMDVATFAYEGGELWISRSGYTGEDGYEISVAEAGAEAFAKALLAHAD VEAIGLGARDSLRLEGGLCLYGHDIDTETRPFEAALGWAIQKVRRPGGDRAGGFPGAD AIFADLGGKAPRKRVGLKPEGRAPMREGVVLYASAEGGDPIGTITSGGFGPTVGGPVA MGYVTAEHAALDTQVFGELRGKRVPVTVAKLPFVAANFKR" /EC_number="2.1.2.10" CDS 992683..993042 /locus_tag="Silicibacter_955" /function="COG: Glycine cleavage system H protein (lipoate-binding)" /gene="gcvH-1" /translation="MKYTEEHEWLQVEGDVVTVGITSHAAEQLGDVVFVELPEVGSEV SKDDEIVVIESVKAASDILAPLDGEVVEVNEAIVDAPSKVNEDPEGEAWFFKLKVSDM SPMDDYMDEAGYKDFIG" /product="glycine cleavage system H protein" /transl_table=11 /note="identified by match to putative ortholog SPO0878 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 993169..996018 /locus_tag="Silicibacter_956" /function="COG: Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain" /gene="gcvP" /transl_table=11 /note="identified by match to putative ortholog SPOA0059 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="glycine dehydrogenase" /translation="MPFEPTDYLPYDFANRRHIGPSPEEMAEMLKVVGADSLDALIDE TVPQSIRQKAALDFGRPMSERELLFHMREVAGKNKVMTSLIGQGYHGTVTPPAIQRNI LENPAWYTAYTPYQPEISQGRLEALLNFQTMISDLTGLEIANASLLDEATACAEAMTM AERVSKSKAKAFFVDRDCHPQNIAVVKTRAEPLGIEVIVGNPDKMDPEAVFGALFQYP GTYGHVRDFTDHIAKLHEHKGIAVVSADPMSLTLLKEPGAMGADIAVGSTQRFGVPVG AGGPHAAYMATKDAYKRNMPGRIVGVSVDAHGNKAYRLSLQTREQHIRREKATSNVCT AQALLAVMASMYAVFHGPKGLKAIAQRIHRKAVRLAKGLEEAGFKVDPQAFFDTITVD VGPLQAAVMKSAVDEGINLRRVGETRVGISVDETTRPETIEAVWRAFGIVRADDDFTP DYRVPANMHRKSDYLTHPIFHMNRAETEMMRYMRRLADRDLALDRAMIPLGSCTMKLN AAAEMMPLSWPEFSTIHPFAPADQQAGYGEMVEDLSKKLCDITGYDAISMQPNSGAQG EYAGLLTIAAYHKARGEGHRNICLIPMSAHGTNPASAQMVGWKVVVVKSDERGDIDLE DFRAKAEKHADNLAGCMITYPSTHGVFEETVHEVCKITHDAGGQVYIDGANMNAMVGL SRPGDLGGDVSHLNLHKTFAIPHGGGGPGMGPIGVKAHLVEHLPGHPETGGSEGPVSA APLGSASILTISWAYCLMMGGAGLTQATKVAILSANYLAKRLEGAFDVLYKGPTGRVA HECILDTRPFADSADVTVDDVAKRLMDSGFHAPTMSWPVAGTLMVEPTESETKAELDR FVDAMLSIRDEIKAVESGEMPRENNALKNAPHTMEDLVKDWDRPYSREQGCFPPGAFR VDKYWPPVNRVDNVYGDRHLICTCPPLEDYAEAAE" /EC_number="1.4.4.2" CDS complement(995997..996134) /locus_tag="Silicibacter_957" /translation="MAQSVHRPEQAIRPSKQESPPREGGFASSLFNVAGAIVDHSAAS A" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 996791..997240 /locus_tag="Silicibacter_958" /translation="MITAMRPYAGVPSNNVTPVVFTVTDTVALSSSDSGATGAEFANS RLGNFLSDDPAPRDRDLDSLFSSDTLPAYEKSSSSSASASSIETEGLLSPLPQSFDPI SLPPLESALSSQMQQVAQDNVFRGISSGSFAQEMYTNTQDVLSRVAA" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(997323..1000247) /locus_tag="Silicibacter_959" /function="COG: Valyl-tRNA synthetase" /gene="ileS" /transl_table=11 /note="identified by match to putative ortholog SPO3136 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="isoleucyl-tRNA synthetase" /translation="MCADKTEVTPEYKNTLNLPKTDFPMRAGLPKREPAWLERWEKIG VYDRLREKEGRQPFVLHDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDSRYVPGW DCHGLPIEWKIEEQYRKKGKNKDAVPVIEFRQECRKFAEGWIDIQREEFKRLGITGNW PNPYITMDYHAEAVIAEEFMKFLMNGTLYQGSKPVMWSPVEKTALAEAEVEYHDKESF TIWVKFKVVEPADHKLAGAQVVIWTTTPWTIPSNKAVVYGADIAYGLYEVTGTPDECW ATVGDKYLLADNLAADVFKRARLSEDQYKRVADVSAEDLAGIGLAHPLAGSEGSEGEW DGIRDFRAAPFVTDTEGTGFVHCAPSHGMEEFELYRDLGMLEQMITYNVMDDGGFRAD LPFFGGKYILNRKGGEGDANKAIIDKLVEVGGLLARGKIKHSYPHSWRSKAPIIYRNT PQWFAGVDRKLDDGMGDYGDTIRERALRSIDELVKWTPQTGRNRLYSMIENRPDWVLS RQRAWGVPLTCFTKKGALPTDADYLLRNSEVNARIIAAFEENGADVWYEDGFKEKVLE GIVAPDDYEQVFDVLDVWFDSGSTHAFVLRDREDGTEDGIADVYMEGTDQHRGWFHSS LLQASATKGRAPYRNVVTHGFTLDEKGMKMSKSLGNTIVPEEIVKQYGADILRLWVAQ TDYTADQRIGAEILKGTADSYRRLRNTMRYMLGSLSDFNEDQRVEPADMPELEQWVLH RLAELDRTVKAGYKAFDFNGVWQAIFNFATVDLSAFYFDIRKDALYCDGDTLNARAAR TVLDILFHRLTTWLAPILVFTMEEVWLERFPGEESSVHLVDMPETPRDWINEPLAAKW AKVRQARRVVTAALEVQRTDKVIGASLEAAPVVHVREADVLEALKSVNFADVCITSDV QLTNDPSPAEAYRLPEVDGVSVVFEKAEGEKCQRCWKILPDVGSHAHPGTCGRCNSAL GG" /EC_number="6.1.1.5" CDS 1000538..1000951 /locus_tag="Silicibacter_960" /function="COG: Truncated hemoglobins" /translation="MQDVQPLARFQISADDIRRVVSVFYGEVRRHPVLAPVFNAHVED WPQHEEKIANFWRNAILRERVYDGFPMREHLSRPDVRAEHFPVWLGLFHAVLEREVTA EQALQWGHLADRIGEGFRTGIESIRQPKDEPPKLI" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3139 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1000974..1001954) /locus_tag="Silicibacter_961" /translation="MSRDPIVFDVEDDDSAAPHVSDAPPVPDLDTPTAVQASATLLGA RARSGWGGWIWGGVAGLITTLATVAAWDYATSLLDRMPVLGLIFSLAFAGLVLLALLF CAKELAAVGRVRRVEGLRQACSEARGGTLAEAQNQVGALVRFYNGRADLEWGLKNLKE RKSEILDPDALIDLAEAELMRPLDARAVAEIEAAARQVAGVTALVPLALADVLTALVA SLRMIRRIAEIYGGRSGLFSSWRLTRAVLSHLVATGAVAIGDDLLEPILGASVLSKLS RRFGEGLVNGALTARVGLAALEVCRPMAFESEDKPRLGKVLQRALSGFAR" /product="conserved hypothetical protein TIGR01620" /transl_table=11 /note="identified by match to putative ortholog SPO3140 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1001951..1002415) /locus_tag="Silicibacter_962" /function="COG: Histone acetyltransferase HPA2 and related acetyltransferases" /translation="MSSVLRPATPLDASKLGEILYRFEHETPWMPKEHSLAETIAFCD RMIAQGWITVAQDPASGQILGFCAKDGPEICALYLLPEHTGLGVGKQLLDQAKETSPE LQLWTFEANHAAQRFYRREGFVETQRTNGHRNSEGLPDIEYRWQVKEMEHAT" /product="acetyltransferase, GNAT family" /transl_table=11 /note="identified by match to putative ortholog SPO3141 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1002412..1003848) /locus_tag="Silicibacter_963" /function="COG: Predicted ATPase" /translation="MSRGTGVTGLAAEMADGVLRGAETLGDALTSPFAAPSLRLGVTG LARAGKTVFITSLVANLIDRGRMSQLSAHRDGRIEAAYLQPQPDDTVPRFDFENHLAA LTGPSPHWPESTRAVSELRLSLRMRPGGMFGGLTGPRILHLDIIDYPGEWLLDLSLMD KDYLSWSEDVLRRIKTRAEAQAFLRAAEAASPAESHDEPLAQGLAQAFADYLQEARNA GYYDCTPGRFLLPGDLAGSPVLTFAPLPPSEAPRGSLAREMARRFEAYKSQVVRPFFR DHFSRIDRQVVLVDALGALHSGPPAMEDLRRAMTDILSTFRPGSNRFLSQLLRGKRVE KILFAATKADHLHHQQHPQLTAIIEALTHEARERAQFAGAETAALSLAALRATTEELR MHEGVELPCVRGILADSGKPAALYPGRLPEDPRHLLTPARQGADTWLDGSYASMRFAP QPLTLKPGDGPPHIRLDRAAEFLIGDRL" /product="Hypothetical protein ycjX." /transl_table=11 /note=", YcjX-like protein, YcjX-like family, DUF463" /note="Conserved hypothetical protein" CDS 1004012..1004791 /locus_tag="Silicibacter_964" /function="COG: Pseudouridylate synthase" /gene="truA" /transl_table=11 /note="identified by match to putative ortholog SPO3143 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="tRNA pseudouridine synthase A" /translation="MPRFALKVEYHGKPFAGWQRQKDQPSVQGAIEAALARIEPGEHT IAAAGRTDTGVHGLGQVAHCDLEKNWDPFRLSEALNYHLKPAPVAIVDAALVDDEWHA RFSAVERQYLFRILMRRAPATHDEGQVWQIKHDLDVAAMQAGANMLLGNHDFTTFRSS ICQAASPVKTLDELRVERVQGLSGPEVHFHVRARSFLHNQVRSFVGTLERVGTGAWSP EDVKHALEAKDRAACGPVCPGHGLYLARVGYPDPVFSSDRV" /EC_number="4.2.1.70" CDS complement(1004908..1005213) /locus_tag="Silicibacter_965" /translation="MSMREDGPSINQRQLSAVDGYKNFSNSMASRQLARAMAELRESA AGANYPREVAPSDKPAPSPLPAGDRDIAQQAFLAHCTQHQMSGREASRLYAGAKAFI" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(1005411..1006394) /locus_tag="Silicibacter_966" /function="COG: Phosphatidylserine synthase" /gene="pcs" /transl_table=11 /note="identified by match to putative ortholog SPO3131 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="phosphatidylcholine synthase" /translation="MPCATALQRISLRLGATCAPFKSFWVTRPCRPRRPTPRWIRRIS WKSTPAPTRRPEPVDREEPARFKRATGKFPSENTVKRQRFWVAACLEIRHHGQMTIEL RALSVHLLTATGAVFAMLAMLAAVDAEWDLMYLWLVVAFAVDGVDGPLARHFDVKQNA PQFDGVLLDLIIDYLTYVFIPAFALFKSDLMSGWTGWAAIIVITFTSAMYFADTRMKT KDNSFSGFPGCWNMLVLVIFALEPNHWVSLGLVLVLSATQFLPLKFIHPVRTERWRSV SLPVALVWTALAGWTAWVEFAPGQLVHWALLVTSVYLLFVGIAQQIMPSRD" /EC_number="2.7.8.24" CDS complement(1007160..1007873) /locus_tag="Silicibacter_967" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MSSSNAGLDDSLRKKIIEKPGVVLDDPNVMRALVAANERAMGSN IVDLRGIAMERLETRLDRLEDTHRSVIAAAYENLAGTNQIHRAVLRLLDPESFAEFME VLRGDLRDILRVDALALILETTQEEAGAAVERVGDILKFTESGFVQSYLAQERAYGGD RCVTLRQIQAGPARLYGERGADLRSEACLRLDLGAGRLPGLLVFGAEDPHQFTPQHGT DLLTFFGGVFERCMRRWLS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3129 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1008056..1008709) /locus_tag="Silicibacter_968" /function="COG: Transaldolase" /gene="fsaB" /transl_table=11 /note="identified by match to putative ortholog SPO3128 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="fructose-6-phosphate aldolase 2" /translation="MKFFVDTAEIDAIAELNDLGMVDGVTTNPSLIKKSGRDIIEVTK EICDLVDGPVSAEVTATDAETMIAEGRKLLEIADNITVKVPLTWDGLKACKTLTDDGH KVNVTLCFSANQALLAAKAGATFISPFIGRLDDVNLDGMDLIEDIRTVYDNYGFETEI LAASIRTVNHILDSARIGADVITAPPAVIKSMVNHPLTDKGLDAFLADIKAAGIKIL" /EC_number="4.1.2.-" CDS 1008890..1011097 /locus_tag="Silicibacter_969" /function="COG: Primosomal protein N' (replication factor Y) - superfamily II helicase" /gene="priA" /translation="MSKAGDSPEFFAQGERVGVLTAQPLDRLLDYRAPEGGCFLGAFV EVPLGPRKVIGVVWGPGAGDFDAAKLRSVIRVLDLAPMRAEMRGFLERAGQYTLTPMS MMLRLATRAPGLADPPSMRKILRRGDREPDRITDARAKVLDVMQEYEGGAFTPSELSE LAGVTTSVIKGLIKQGAIREEEAPRDLPFPPLDPDLPGKTLSEDQAAAAAALEAGVES GRYGTTLLKGVTGSGKTEVYLEAVAACLRKGRQALVLLPEIALTAEFLKRVEARFGAV PAEWHSGVTMTERRRVWRMVGQGAAQLVIGARSSLYLPFRDLGLIIVDEEHDTSYKQE EGVLYNARDLAVWRASLCQAQVVLASATPSLETWANAEAGKYQRLDLTSRFGDSVLPE MRAIDMRNEELLPSTWISPTLKQAMKLRLERGEQSLLFLNRRGFAPVTICRACGAQVA CDNCDARMVEHRFMKRLMCHQCGETKPVPTECPSCKVEGKMAPVGPGIERLGEEAAAL FPEARIAVLSSDLFGSARALKQRIEDIAAGEADIILGTQLVAKGHNFPLLTLVGVIDA DLGLQGSDLRAAERTFQLMRQVAGRAGRAERRGEALMQSFQPEHPVIRAILSGDEESF WRAEAEQRQAAGVPPYGRMAGVILSGTDLAQVFDLGGALARNDGPLRQVGAQLFGPAP APIARVRGRHRVRLLVKADKGAPLQDAITRWIAPFKLKGDLRLNVDIDPQSFL" /product="primosomal protein N'" /transl_table=11 /note="identified by match to putative ortholog SPO3127 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1011200..1012435 /locus_tag="Silicibacter_970" /translation="MFTPISLAQGRTLPFWRRPITLLFLMAIAMPVAFNTWSALLNNF VIEVANFDGADIGVLHTMREIPGFLAFLVIFLIIFIREQVLGLLSLALLGAATAVTAW FPTLQGILMITVLSSIGFHYYETVAQSLQLQWLSKERAPQMLGWLVATGSAATLVVYG AIVVLWEPMNLSYNVVYLAAGGFTVLIALYCLFAVPQFDGPTPQNKKMVLRRRYWLYY ALQFMAGARRQIFVVFAGFMMVERFGEVHHLTGLYLINLLVNMVAAPFLGRFVARFGE RRTLIFEYAGLATVFALYGGIYWFGWGVMLAAALYVVDHILFALALALKTYFQKIADP ADIAPTAAVAFTINHIAAVFLPVMLGLLWVASPAAVFGLAAMMALVSLLLSLMIPRHP EPGNETIFAQFAAPTPAE" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3122 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1012547..1013416 /locus_tag="Silicibacter_971" /function="COG: Ribosomal protein L11 methylase" /translation="MPTFTALTTLSEKAQAEALGEAMERLTPEPTGIGVFEVEDGSGL WEVGGYFTEAPDEAGLALLAAMHDAKPFAVSELPETDWVAHVRRELAPVEAGRFFVYG SHDADKVPADKIPLLIEAAMAFGTGHHGTTLGCLKALDHLLCEGFEGKKVADIGCGTA VLAMAAARVWPTAQILASDIDEVAVDVAEANMDANGMKGAVACLEAAGFDAPALKAAA PYDLIFANILKGPLVALAPDMAAHLRAGGYAILSGILNEQADDVIAVYAQNGINLVKR TEIGEWTTLILSK" /product="ribosomal protein L11 methyltransferase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3120 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1013616..1013876 /locus_tag="Silicibacter_972" /translation="MRSDGLIVVEPQKVVRSRISGKVFILFLVVGLMFKGFLVAALGY SSYDARVAQLAQGSFVERGGAFLMQRDPISTRIAEELRPILR" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3119 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1014029..1014367) /locus_tag="Silicibacter_973" /translation="MQNAHGTHAISPLARAGFDLYLPLTRYRARNRIILRKTLDMAAI DTTRTAQGTSGLIGRIGAFLYTTSAKLMAWNDARVTRKSLSALSDRELADIGLCRGDI DQIDAHSPLV" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3118 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1014552..1015118 /locus_tag="Silicibacter_974" /function="COG: Holliday junction resolvasome, endonuclease subunit" /gene="ruvC" /transl_table=11 /note="identified by match to putative ortholog SPO3117 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="crossover junction endodeoxyribonuclease RuvC" /translation="MCSRFVLVLASKQTINNQRSGGGMRILGIDPGLRTLGWGVIESN GARLSHVANGLCHSDGDDLGERLLSLHNQVTEIIDAYRPDQAAIEQTFVNKDGAGTLK LGQARGVALLTLAKAGLPTGEYAPNRVKKTVVGVGHAEKEQVLHMVKLQLPGCAPRGA DAADALAIAICHAYYGGSNQRQLKEVGA" /EC_number="3.1.22.4" CDS 1015115..1015804 /locus_tag="Silicibacter_975" /function="COG: Holliday junction resolvasome, DNA-binding subunit" /gene="ruvA" /translation="MIGKLTGRLDYKTPDHVMIDVRGVGYIVYCSDRTLASLPAVGEA VQLYTELLVREDLMQLFGFTSLVEKEWHRLLTSVQGVGAKVSLAILSALGPEGVSRAI ALGDWAAVKAAKGVGPKTAQRIVLDLKDKAPSVMAMGGTVTEALEGPELDAVVEPAAE APAKPARKAAPKAPTGAAAASAGALSALGNLGYGPSDAAGAVAEAAANNPDAGEAELI RAALRLLAPKG" /product="Holliday junction DNA helicase RuvA" /transl_table=11 /note="identified by match to putative ortholog SPO3116 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1015816..1016835 /locus_tag="Silicibacter_976" /function="COG: Holliday junction resolvasome, helicase subunit" /gene="ruvB" /translation="MIDADPTLRPEPLPEDNDRALRPQGLGEFIGQAEARANLRVFIE SARRRGEAMDHTLFHGPPGLGKTTLAQIVARELGVNFRMTSGPVLAKAGDLAAILTNL EARDVLFIDEIHRLNPAVEEVLYPAMEDFELDLVIGEGPAARTVRIELQPFTLVGATT RMGLLTTPLRDRFGIPTRLQFYTIDELFEIVSRNARKLGAPADDAGAREIARRARGTP RIAGRLLRRVVDFAVVEGDGTITRELADGALTRLGVDQLGLDGADRRYLRLVAENYGG GPVGIETMSAALSESRDALEEVIEPYLLQQGLIQRTPRGRMLAQKAWTHLGIAPPKSQ SDLFG" /product="Holliday junction DNA helicase RuvB" /transl_table=11 /note="identified by match to putative ortholog SPO3115 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1017072..1017737 /locus_tag="Silicibacter_977" /translation="MPALMLPEEIEALFTREDGSYAFARWGRPIAPIVFGVADETLAI VKGAVEAVVTLAGHQMAETDPELGTNLMFFFFRDWEELLEVPDLDRMIPGLAPLVNRL STEEASQYRAFRFDDEGAIKAAFVFLRMKGEMAQVPAETLALTQAVQVMLLWSERAFS EVSPLAVLPENGNTILRPEIAGVIAAAYDRMMPVAAQDASHALRLFARLQGPAPDQQE HTT" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3114 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1017734..1018120 /locus_tag="Silicibacter_978" /function="COG: Predicted thioesterase" /translation="MSHQFPVTVYYEDTDMGGVVYHANYLRFIERARSDYVRRLGVDQ NEMRDKGIVWVVTRIEADYLAPARFEDELIVETQPEKMTSARLMMSQVVRRAGQELFR AKVTAVCMDMYSGKPVRLPAEVRASL" /product="conserved hypothetical protein TIGR00051" /transl_table=11 /note="identified by match to putative ortholog SPO3113 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1018235..1018930 /locus_tag="Silicibacter_979" /function="COG: Biopolymer transport proteins" /gene="tolQ" /translation="MEAETLALAQEIDFSMWGLFARATLTVKLVMIMLIVASIWSWSI IIQKVITYRTARREAQVFERAFWSGNPLDELFEEIGAEPSGRSERIFAAGMIEWRRSH RTDGALIPGAQARIDRSMDVAISKESEGLQSGLQVLATIGSTTPFIGLFGTVWGIMNA FIEIAEQQNTNLAVVAPGIAEALLATGLGLLAAIPAVIFYNKLSADSDRIIGGYEAFA DEFATIFSRQLDS" /product="proton transporter TolQ" /transl_table=11 /note="identified by match to putative ortholog SPO3112 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1018934..1019422 /locus_tag="Silicibacter_980" /function="COG: Biopolymer transport protein" /translation="MGAGVQTKDAGGGRRRGRRRSRARPMAEINITPFVDVMLVLLII FMVAAPLMTVGVPVELPKTAAGALAGDDEEPLTVTMTAAGDIQIQTTPVARDQLVARL QAIAAERDSDRVYLRADGAIAYSDVMQVMGALNAGGFANVGLVTDQGGPALDGRSAAP AE" /product="biopolymer transport protein, ExbD/TolR family" /transl_table=11 /note="identified by match to putative ortholog SPO3111 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1019436..1020587 /locus_tag="Silicibacter_981" /function="COG: Type V secretory pathway, adhesin AidA" /translation="MQTGTKISLAGHGLLITWALAGGWLNPEPLPFQSQDVSIISAEE FARLSEQYAAPEVSDAPEAPQEPAITETTPSIPERPSQTPETPATPAPIETPVADTAA EPPAPEPDPEVPSRVPDAPELPEIVTDLPQTAEPQTAQQTDRVAPEPVRAPEPDTQIG DVVQEEVAPDAEAEANQPVQEATAPEAASDRIVTEAEADDAEPTAPLASVRPRARPAR PAPEPEPDPEPQTQTAARDEEPAPDAEQNPEVERSAVNDALAEALSGAGEVEAPEPSG PPMTRGEKDALRIAVSQCWNLGSLSSEALLTEVVVGVTLSREGVPDIGSIRLLSSTGG SDSSAKQAYEAARRAIIRCGSRGFDLPADKYAQWRDIEMTFNPEGMRIR" /product="tonB domain protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3110 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1020584..1021909 /locus_tag="Silicibacter_982" /function="COG: Periplasmic component of the Tol biopolymer transport system" /translation="MRNAIATVLLGLAMLLPVGAVQAQDGPLRIEITDGVIEPLPFAV PDFIADTPAAAQYATDIARVIAQDLVGSGLFREIPKVAYISPYTDFDAEVNFTDWKAI NAQALIAGAVSLSGDRITVRFRGYDVFAGQELGAGLQLSGTTDGWRRIAHKVADTIYS RLTGEGGYFDSRVVFVSETGPKNDRKKRLAIMDYDGANVQYLTNSDAIVLAPRFSPTG DRVLYTSYESGFPQIHVLDVGRVQRRVLSAGNGSMSFAPRFAPNGQTIVYSQSQGGNT DLFSMDINSGNPQRLTSAPSIETAPSFSPDGSQIVFESDRSGTSQLYVMSASGGEAKR ISFGQGRYGTPVWSPRGDYIAFTKQNAGRFHIGVMRTDGSEERLLTASFLDEGPTWSP NGRVIMFTRETQGASGQARLYSVDISGRNLKPVKTPDGASDPSWSPLQN" /product="TolB, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3109 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1022013..1022516 /locus_tag="Silicibacter_983" /function="COG: Outer membrane protein and related peptidoglycan-associated (lipo)proteins" /gene="pal" /translation="MSGIKTAILLVAGLALSACSDTRWDDTSAGNGGSGIGVDGGLGD PSSPAYFREAVGDRVLFLVDQSSISPEAQVILDGQARWLQANPAYVVTIEGHADERGT REYNLALGASRANSARDYLISKGVAASRIQTVSFGKERPIEICSEQSCYEKNRRAVTV LAGGALS" /product="peptidoglycan-associated lipoprotein" /transl_table=11 /note="identified by match to putative ortholog SPO3108 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1022522..1023373 /locus_tag="Silicibacter_984" /function="COG: FOG: TPR repeat" /translation="MSGLRQILLASALAVASALPTMAQEREQTLADIRQELTVLHVEV QRLNRELSTTGAPSASLAGSSVLDRVTAIETELQKLTAKTEQLQFRIQSIVKDGTNRI GDLEFRLVELEGGDLSTLGETTTLGGDIEGETELGQTTVPGTDGESTVVGGGELAVGE EADYKLAMSDLEAENYQAAADRFATFKEAYPGSPLTAQVDFGRGKALDGLGDTREAAR AYLAAFTGDTAGAIAPEALFELGAALGRLGQLDQACITLAEVAVRFPNDPAVTAAEAE RSKLACS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3107 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1023364..1024656 /locus_tag="Silicibacter_985" /function="COG: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control" /translation="MLLTPTEEALTSAIRARIGPLPEKLGVAVSGGSDSVALMHVLAT MARAEDTALAVATVDHGLRPESRREAEFVAQQAHDLGLSHQTLTWQHPADSGNLQAEA RAARYRLLGDWARTQGLGAVAVGHTADDQAETVLMRLRRASGVAGLCGMPTCHHRDGI DVLRPMLDLRRSDLRAYLTARDVAWIEDPSNLDMKFERVRIRDALNALEPLGLTVDAL TAVADNMRMANRALDSATRTAAASIGQIRLGMVVLDCAGFNRLETEIARRLLVSALLH TNGAAYPPRRAPVLDALKALKEGRGATLQGCHILVRGGAIWVGREYASVQHSACALLP GEGGVATMDATWDAAWHIKAPAGWSRRVEIRALGAEGLAEIPDWRSHDAPRALLKSLP GVWCDGQLIAAPLLQERSGWTIAAIRQPETWALSALSH" /product="PP-loop family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3106 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1024746..1026659 /locus_tag="Silicibacter_986" /function="COG: ATP-dependent Zn proteases" /gene="ftsH" /transl_table=11 /note="identified by match to putative ortholog SPO3105 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" /product="ATP-dependent metalloprotease FtsH" /translation="MGNARNIAFWVVLFLLVVTLFNLFSGSGSTLQSREKTYSEFVTA VEGGNVSTVTLDGEQVRYTTSDGQSYTTIKPGDAEVTQMLIDNNIPVRAEKQQQSTFQ SFLLTLLPFLLLIGVWIYFMNRMQGGGKGGAMGFGKSKAKMLTEKHGRVTFDDVAGID EAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTI SGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGNDEREQT LNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGREKILG VHARKTPLGADVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMEDFENAKD KVMMGAERRSMVLTADQKEKTAYHEAGHAVVGLKLPECDPVYKATIIPRGGALGMVVS LPEMDRLNWHKDECEQKLAMTMAGKAAEIIKYGPGHVSNGPAGDIQQASQLARAMVLR WGMSDKVGNIDYAEAHEGYSGNTAGFSVSANTKELIEEEVRRFIEEAYQRAYQILEEN KDEWERLAQGLLEYETLTGEEIKRVMNGEPPQADDDADDDADTGATSVTAIPKAKSKK TPPEGDMEPEPSS" /EC_number="3.4.24.-" CDS 1026827..1027549 /locus_tag="Silicibacter_987" /translation="MYSQSPQEVSASRAEAAFHPRSAPFIFACLITLAVGVALWGAAA HYPAFQDALHEDGPVEKVSAVLWGLCAVMVLYFVGGTALRTQWQLSALFFLLCGRELD FDKRFLSEGILQLRLYSGGAPLWEKVIGIAIIALVLLVVWRLLRVNLPELLKGLRQLS LWSWGGALAVSAIVVAKGVDGIGRKFADFGVILDPTLIARALVYEELLELFAAAIVAW SICHFEGQRRRARGGRSMACCS" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1027598..1028179 /locus_tag="Silicibacter_988" /translation="MPVLRETQFSAEITWLGMVPADTGIQAQPRTELDLLFSGVAGER HEGAQRPSCVRVKNLYVPGTEIRNTRQLTILSEEELALIAAEMGLEALDPRYLGATVV LRGIPDLTHLPPASRLQGKNGVTITVDIENRPCILPGREIEKDHTGFGPKFKTAAENR RGVTAWVERPGRLALGDQMRLFVPDQPAWAAER" /product="MOSC domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3104 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1028356..1030032 /locus_tag="Silicibacter_989" /function="COG: Formyltetrahydrofolate synthetase" /gene="fhs-2" /transl_table=11 /note="identified by match to putative ortholog SPO3103 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="formate--tetrahydrofolate ligase" /translation="MSYKSDIEIARAANKLPIQEIGAKLGMKNDDLLPYGHDKAKVSQ EFINSVQGNEDGKLVLVTAINPTPAGEGKTTTTVGLGDGLNRIGKNAMICIREASLGP NFGMKGGAAGGGMAQVVPMEEMNLHFTGDFHAITSAHSLLSAMIDNHIYWGNEQEIDI RRVAWRRVVDMNDRALRQITASLGGVSNGFPRETGFDITVASEVMAILCLANDLKDLE KRLGDIIVAYRRDKTPVYCRDIKAEGAMTVLLKDAMQPNLVQTLENNPAFVHGGPFAN IAHGCNSVIATKTALKVADYVVTEAGFGADLGAEKFMNIKCRKAGIAPSAVVVVATVR AMKMNGGVAKADLGAENVEAVKNGCANLGRHIENVKSFGVPAVVAINHFVTDTDAEIN AVKEYVASHGVEAILSRHWELGSEGSAPLAEKVVELVEGGGANFGPLYPDEMPLFEKI ETIAKRIYRADEVLADAKIRNQLKEWEEAGYGHLPVCMAKTQYSFSTDPNLRGAPTGH SVPVREVRLSAGAGFIVVVCGEIMTMPGLPRTPAAESICLNEEGLIEGLF" /EC_number="6.3.4.3" CDS 1030098..1030403 /locus_tag="Silicibacter_990" /function="COG: Chorismate mutase" /translation="MTHRKPPQDCVDMTELRQAIDAIDVELVKLLRARVDYIDRAVTL KQANGWPARIQSRVEEVVSNACQTADEEGLDTELVERIWRDMVDWSISREAREIPEI" /product="chorismate mutase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3102 from Silicibacter pomeroyi DSS-3, Chorismate mutase, shikimate pathway, belas" /note="Conserved hypothetical protein" CDS 1030448..1031350 /locus_tag="Silicibacter_991" /function="COG: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase" /translation="MAAEIIDGKAFAAKVRGQVTEHVTRLKEEHGITPGLAVVLVGED PASQVYVRSKGKQTVEVGMNSYEHKLDADTSEADLLALIDQLNKDSEVHGILVQLPLP KHLDEDLVINSIAPEKDVDGFHISNVGLLGTGQKSMVPCTPLGCLMMLRDYHGSLSGL DAVVIGRSNIVGKPMAQLLLGDSCTVTIAHSRTKDLPEVVRRADIVVAAVGRPEMVPG DWIKEGATVIDVGINRIDAPEKGEGKTRLVGDVHYESAAARAGAITPVPGGVGPMTIA CLLANTVTACCRANNLSEPEGLTA" /product="folD bifunctional protein" /transl_table=11 /note="identified by match to putative ortholog SPO3101 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1031463..1032770) /locus_tag="Silicibacter_992" /function="COG: Predicted ATPase with chaperone activity" /translation="MNMQNQTVMAPPPPKGLAEMRLPLVMMRDILLKTMFRKNLDMVT DLAGAICLPTSVTQELVDLARGQKLLEATGTLNANSGNEMGYQLTDAGKARALDALSQ SEYFGAMPVPLDVYREQVKRQSIRNIMVTRQQLTSAMGHLILPDSLLDHLGPAVSAGR SILMYGPPGNGKSSISNGIRDALGDRVYVPRAIEYAGQVITVYDPIVHTEVAAEPVDP NALRKRRRFDERYVCCERPTVVTGGELSLSMLDLVYNPTARTYQAPLQLKSTGGIFIV DDLGRQAESPQALVNRWIVPLEESKDILALQSGEKFEVPFDTLVIFSTNFHPNEIFDQ AALRRIFFKIKIDGPDQENFLKIFAMVARKKGMPLDEAALVHLLKTKYPTIDNVYANY QPVFLIDQMISICEFEGIPYQMSPELIDRAWANMFVRDEVIVK" /product="hypothetical protein" /transl_table=11 /note="homology to flp pilus gene, ATPase with chaperone activity, belas" /note="Hypothetical protein" CDS complement(1032934..1033431) /locus_tag="Silicibacter_993" /translation="MHFPPEAALWFLPFVVPLCYVVALNDLRSMRIPNWTVDTLGLIY ILLGLLVMPTWADYGWQLLHLPVGIAIGYLFYASGLVGAGDAKFAGAAAPYVAFADLK LIMIIFAITLLSGFLAHRLARHTPLRRLAPHWQSWNTGAKFPMGLCLGATLAIYLGLA AFVPV" /product="membrane protein, putative" /transl_table=11 /note="homology to flp pilus gene, cpaA, belas" /note="Hypothetical protein" CDS complement(1033447..1034298) /locus_tag="Silicibacter_994" /function="COG: FOG: TPR repeat" /translation="MRHMGLLAAGLIGALSLTACSKEIDKEAVDRALQDVNVVDESNL NSVVLNSADPNEAVSYFQRSVKQSPDRIDLNRGLASSLIRAKRYTEAAAAWQRVVDLP EAQSADSVELADALIRNNEWDKARQVLDTVPPTHETFKRYRLEAMVADSEQNWKASDS FYETAVGLTTKPAGVFNNWGYSKLTRGDFSGAERLFGEALRQDPSLFTAKNNLVLARG AQRNYSLPVIAMTQTERAQLLHTMALSAVKQGDVSTGEGLLREAIETHPQHFDAAARA LEALENG" /product="UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit" /transl_table=11 /EC_number="2.4.1.-" /note="UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit (EC 2.4.1.-) (O-GlcNAc transferase p110 subunit)., TPR repeat, homology to flp pilus gene, belas" /note="High confidence in function and specificity" CDS complement(1034332..1034937) /locus_tag="Silicibacter_995" /function="COG: FOG: TPR repeat" /translation="MQFRNGRTHLFRLVSPTAAISALALMAACVSGQGQPLKPVSPNG VWAPGVDQRGESVRALEVGHRLLAADQYELAIEAFNRAALEEGLTAEVLSGLGSANLG LGRLGQAETLLRQAVDKEPQWPEALNNLGTVLLEKGEYAEAEQILRRAYALDNGQSDA IRDNLRLALENLDNTGHTAPTGDQDKLVRKGGGVFLIETTP" /product="UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase" /transl_table=11 /EC_number="2.4.1.-" /note="UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase (EC 2.4.1.-) (O-GlcNAc) (OGT)., TPR repeat, homology to flp pilus gene, belas" /note="High confidence in function and specificity" CDS complement(1034947..1035918) /locus_tag="Silicibacter_996" /function="COG: Flp pilus assembly protein TadC" /gene="ctpI" /translation="MDPLTLVQDLLIQHLGEFGPLMAVGFLGLLLVVVAAFLLFNQPE DPLKKLQRNLSADQNAKPQNERLRQASRNEQLQKFANFLEPQDAEELSAMQLKLRQAG YQSKDAVRLFHFLQFALGLAGLGFGLFLVYVLNADVEYTTNQLAMRVLGPGAAAYYLP RYWITRRIEERKQAITRAFPDALDMMLVCVEAGQSLDQSIVRVGKELQASYPELAEEF EIVAHEMKAGKEKDKVLRDMATRCGVQDVASFVTVMIQSAAFGTSIADALRVYAGEMR DKRVMRAEEAANKLPTKMTLATMGLTVPPLLAILIAPSVQGLGNIGK" /product="hypothetical protein" /transl_table=11 /note="Bacterial type II secretion system protein, Bacterial type II secretion system protein F domain, homology to flp pilus gene, tadC, belas" /note="Hypothetical protein" CDS complement(1035929..1036897) /locus_tag="Silicibacter_997" /function="COG: Flp pilus assembly protein TadB" /translation="MEFGIEPLIYGLIFIGVLVLVEGIYLVAFGKSISLNSRVNRRLE MLEKGGNREQVLEQLRKEMQQHLKSQSIPLYSLLAEKAQKAAIAFTPIQLILVMCGLT GVAFIGLSVGTQAALPVRVLGSVIIGVGAVFFWVNSKAKKRMAKIEEQLPDGVELMVR SLRVGHPFSSAVQIVAKEVEDPLATEFGIIADECAYGRDVGEALKEMAERLDMQDLRF LAVAVTIQQQSGGNLAEVLAGLAKVIRARFRLFRRVKAITAEAQWSGKFLSGFPLFVL AGTLVSDPHYYDNVIDHPWFMPACFIVGGMLTANIFVMRKLTNIQV" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Bacterial type II secretion system protein, homology to flp pilus gene, tadB, belas" /note="Hypothetical protein" CDS complement(1036897..1038354) /locus_tag="Silicibacter_998" /function="COG: Flp pilus assembly protein, ATPase CpaF" /translation="MFSKYKKQSSAPAAPAAAPAAAPKPAASPSAPAAGVKAVLRRPD QRNAAAAAPQDRERKRKERLSEIKIDLHRELLENLNLAALEKASESELRSEIAAISNE VLQEKSIVLNREDRQQLMKELYDEVTGLGPLEALLKDDTVSDILVNGPQQIFIERAGK LELSDITFKDEKHLMRIIDKIVSAVGRRVDESNPYVDARLQDGSRFNAMVPPIAVDGS LVSIRKFKKDKLQIDDLVNFGAFTEEMAAYLQAAVSTRLNVIVSGGTGSGKTTTLNAL SSFIDNSERILTIEDTAELQLQQTHVGRMESRPPNVEGKGEVSPRDCLKNALRMRPDR IIVGETRGAEVIDMLQAMNTGHDGSMTTIHANSARDGISRLENMIAMAGIEMPIKAVR SQIASAVNLIVQASRLQDGSRRMTSITEITGMEGDVISMQEIFRFQRVGLTPDNKIIG HFTATGVRSHFSERFRLWGYDLPASIYEPTVMESR" /product="Hypothetical protein MJ0900." /transl_table=11 /note="Bacterial type II secretion system protein E, Type II/IV secretion system protein, homology to flp pilus gene, cpaF, belas" /note="Conserved hypothetical protein" CDS complement(1038387..1039631) /locus_tag="Silicibacter_999" /function="COG: Flp pilus assembly protein, ATPase CpaE" /gene="minD" /translation="MTSGISQTEAVPIAACTISRDVQNFDLLIEDMEAVMGEAWGDLG FTESLAFFYQPEAETLEFVALAIDAEDEDNLPLMIEIITQAKSRNIKVILVAEDVTPA ALHKLLRQGADEFIPYPLPEQELAAAIDRLRKPEEAPAPAAAPQRAHKLHADSQREGA VIVTQGLAGGTGASTFAVNLAWELAELNSGDRPSVCLLDLDLQTGSVSTYLDLPRREA VMEMLSETEAMDEDIFGQSLISFQDKLQVLTSPADMVPLEFITPEDILRVVEMARSHF DFVVIDMPHTMVQWTETVLNLAHVYFAMIELDMRSAQNALRVKRALQSEDLPFEKLRF LLNRAPRFTDLNGKSRVKRLAESLGISIDVQLPDGGKAILHSCDHGQPLAISAPKNPL RKEIAKLAKNLHELGQAEAEAA" /product="Septum site-determining protein minD" /transl_table=11 /note="Septum site-determining protein minD (Cell division inhibitor minD)., CheY-like, homology to flp pilus gene, cpaE, belas" /note="High confidence in function and specificity" CDS 1039648..1039773 /locus_tag="Silicibacter_1000" /translation="MFGPGTQPMLDQRRFLHKGHGAYGISVVRNMGEIGAKKLRL" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="homology to flp pilus gene, , belas" /note="Hypothetical protein" CDS complement(1039881..1040504) /locus_tag="Silicibacter_1001" /function="COG: Outer membrane protein and related peptidoglycan-associated (lipo)proteins" /translation="MLKYAAILGLALATGACAYKEAGEPLDPKYFGSANANNTAVLSG DRSYRVQLATRFANEVPSTINFDFDSARLDGEARRVLDTQAKWIRQFPEVRFRVYGHT DAVGSQTYNKRLGLRRARAAVNYLVSRGISRSRLEAVASFGETQPLIVTDQRERRNRR TVTEVSGFVAARVNELDGKYAAVIYRDYVESAVSPTTISAKTALTDE" /product="OmpA family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3088 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1040526..1042019) /locus_tag="Silicibacter_1002" /function="COG: Flp pilus assembly protein, secretin CpaC" /translation="MKHEVAHISRKIGAQRPHIRGVIGKAGHMSIRRYCAAALTGLAL LFAHSPSPAVAQGISVLKKGTNAVLDVPMNRAVVVEADVPFAELSIANPSIADISSLS DRTIYVLGKSPGLTTLTLLDGSGGLITNVDVRVAADVSEFKQRLQQILPNEKIEVRTA NDGIVLSGTVSSAQRLQRALDLAERYAPDRVSNLMTVGGIQQVMLKVRFAEMERSVSK SLGGSMLIRSSDGAIATGSFQNRGGNGNIFGDSVTSPVQLQSETLGAALFGFDIGAVQ FNVLLEALEQKGLVRTLAEPNLSALSGQEANFLAGGEYPVPVAQEDGVITVEFKPFGI ELNFIPRVVDGDLINLELKAAVSAIDTTNSATFDGFSINAFSRRETATTVELRDGESF AIAGLIEDEFRDGAAQVPWLGDVPVLGALFRSADYARNQSELVIIVSAHLVTPTRGEA LALPTDRIRPPSEKNLFLFGQTERAQAGAAGEVANQDFNGSYGYLLD" /product="Hypothetical 44.3 kDa protein y4xJ." /transl_table=11 /note="Bacterial type II and III secretion system protein, Bacterial type II and III secretion system protein, homology to flp pilus gene, cpaC, belas" /note="Conserved hypothetical protein" rRNA 1042189..1045035 /locus_tag="Silicibacter_14" /gene="23S rRNA" /description="RNA" tRNA 1045439..1045512 /locus_tag="Silicibacter_34" /gene="Silicibacter_34" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS complement(1045600..1045959) /locus_tag="Silicibacter_1003" /function="COG: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /translation="MQELKRLQKDNDRLWREVSELALDTLILSESAIEELERCDRLPE LILLDINMPRMNGFEFLEIVDEKLSQAQPPVKVALLTTSSNPADARKAESFASVGWFL SKPLGRDMLDQLVSEFS" /product="Sensor protein barA (EC 2.7.3.-)." /transl_table=11 /EC_number="2.7.3.-" /note="CheY-like, belas" /note="Conserved hypothetical protein" CDS complement(1046217..1047374) /locus_tag="Silicibacter_1004" /function="COG: ABC-type spermidine/putrescine transport systems, ATPase components" /gene="lacK" /translation="MRSLRLPKAGSSPPDPRPASGTIAPALFEKDEIMTGVTLTNAVK KYGEVQTIFDVNLEIEDGEFCVFVGPSGCGKSTLLRMVAGLEETTAGKIHIGSRDVTD LDAAERGVAMVFQSYALYPHMTVEENMGFGLKMTGHPKAEIKEKVAEASRILQLDQYL KRKPKALSGGQRQRVAIGRAIVRGPEVFLFDEPLSNLDAELRVDMRVEIARLHKEIGA TMIYVTHDQVEAMTLADKIVVLRAGRVEQVGKPMELYNDPDNRFVAGFIGSPSMNFVE GEVRGGKVVVRAFGGREITTSVALPQDGAKVIVGLRPQHIRLSADGPATLDLRERLGG VSYDHLICAEGAKLIVETREEDSLEEGDSVGFDFEDRDVFLFDAQSEERLR" /product="Probable ABC transporter ATP-binding protein y4oS." /transl_table=11 /note=", ABC transporter related, ABC transporter, potA: polyamine ABC transporter, ATP-binding protein" /note="Conserved hypothetical protein" CDS complement(1047331..1048122) /locus_tag="Silicibacter_1005" /function="COG: Transcriptional regulator" /translation="MATANAPQRSNDGTVGKALEVLDQVAEYGRPVRFGELLAASVHP KATLYRLVQTLTNQGMLSFDEAQQTYAPGLRLVRLAHAAWRQSSLAPVARPHLDALSA EVGETIHLAQLDQGQVLYVDKRNARTPIEMFSQAGKIGPGYCTGVGKAMIAHLDESAR EDAIRRQAFFQHTAHTLANEAGFRAELDDIRAQGIAFDREEHEPGIICIAAPILSSKD RVMGALSITSSTERQSLEGLTSLKPLLLKTANEIAEAAESWQFPT" /product="Transcriptional regulator kdgR." /transl_table=11 /note=", Bacterial regulatory proteins, IclR, Bacterial transcriptional regulator, pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family" /note="Conserved hypothetical protein" CDS 1048263..1049516 /locus_tag="Silicibacter_1006" /function="COG: ABC-type sugar transport system, periplasmic component" /translation="MNLLKGTAAGLAMAVGLAASAQASELTGTLKIFSDMSNPAPRAV MEKMASDFDALHPNLKVELTVIDREAYKTQIRNFLTANAPDVANWYAANRMRPYVSAG LFEDVSDLWAEPAIAENLASTKGAMTLDGKQWGVPYTYYQWGVYYREDIYNELGLEEP SDWATFKSNCQKILDSGRKCFTIGSKFLWTAGGWFDYLNMRTNGYDFHMALTNGDVEW TDDRVKQTFANWRELIDMGAFIDNHQSYSWQEALPFMVNGEAAAYLMGNFSVAPLREA GLSDEQLDFYQFPAINPDVELAEDAPTDTFHIPSGAQNKEAAREFLRYVVSADVQTAI NAGDALGQLPVNASSSVDDDEMLNQGFEMLSSNSPGGIAQFFDRDAPAEMASVAMEGF QEFMVFPDNLDDILNRLEKARQRIY" /product="Hypothetical ABC transporter extracellular binding protein PH1039 precursor." /transl_table=11 /note=", Bacterial extracellular solute-binding protein, family 1, Bacterial extracellular solute-binding protein" /note="Conserved hypothetical protein" CDS 1049538..1050578 /locus_tag="Silicibacter_1007" /function="COG: ABC-type sugar transport systems, permease components" /translation="MPPARIPLRPCGPLCRYIFDRPPDPPDGGARCLYPGETPLADTT TPLRDGAPGWIRRNRQSLAPALFLLPGVLFFLFYVIFPILQSFNLSFYRWDGLGEPVY VGVENYVELMDDRAFEVSMWNNLKWLLLYLLAIPAGLAIALFLNQNIVGIRLYKSLFF FPFVISQVVVGLVFSWFYDPTFGLLNQILGFFGFGTLNVLGDPSLVTYGIIFAGLWPQ TAYCMILYLTGLNAVDPEQVEAARLDGAKGLKMLWYVIIPQLRPATFIAFVVTIIGAL RSFDLISIMTNGGPFGSSRVLSFYMFEKALSEYGFRMGYGAAIAVVLFLIMLSFIAYF LWSMYQEEKGGR" /product="Hypothetical ABC transporter permease protein yurN." /transl_table=11 /note=", Binding-protein-dependent transport systems inner membrane component" /note="Conserved hypothetical protein" CDS 1050578..1051426 /locus_tag="Silicibacter_1008" /function="COG: ABC-type sugar transport system, permease component" /translation="MFPRPIEKSSPAWAATYQALVPMALVLWLLPLIAVAVFSIKPDV DFTTGNYWGWPSAFKGFENYGKVFFASDMPRYLLNSVLITVPTVIGAVALSCMTGFAL GVYKFRGNLLLFFMFVAGNFVPFQILMVPVRDLTLDMGLYNTKLGLVLFHVAFQTGFC TLFMRNFIRALPFELIEAARVEGVAEWRIFWFVVLPLMKPAIAALAVLIFTFIWNDYF WAVVLTQGAESQPVTAGITSFNAQYRAAYHLMSAGSIVAALPPVAMFFLMQRHFIAGL TLGAVK" /product="Hypothetical ABC transporter permease protein PH1036." /transl_table=11 /note=", Binding-protein-dependent transport systems inner membrane component, Binding-protein-dependent transport system inner membrane component" /note="Conserved hypothetical protein" CDS 1051423..1053489 /locus_tag="Silicibacter_1009" /function="COG: Alpha-galactosidase" /gene="rafA" /transl_table=11 /note=", [EC:3.2.1.22] , Glycoside hydrolase, clan GH-D, Melibiase" /note="High confidence in function and specificity" /product="alpha-galactosidase" /translation="MSDGLQLWRIDAPGQTLVLSSDGGLPGALYWGPALQPETDLIAL ARAVEQEVTGGMIDRLPPLSLCPEAGLSFEGQPGLVAYRDGAPLYPRFRLEDTNGAQF TCRDRALGLTLFFDFEVRGGTIAASTTLTSEQDIILHHLAAPVLPGPQMGQEIVDVCG RWIGEFQLQRTPWRAGIHKREARTGRSGHEHPPLAYFPEAGATNTHGTVFAMHYGWSG GHVMLAEELPSGRRQIQWGHATGTQGAGTKFRSAPLYLAVSQAGFNGCAVAFQRLLSD HVVVWPKPETPRPVHYNCWEAVYFDHDFTVLSDIAERAAALGAERFVLDDGWFGRRDD DTTSLGDWQIDRRKWPEGLGPLIDHVERLGMTFGLWVEPEMVNLDSDLARAHPDWVLG PVDQIEGRQQRVLDLSREDVREHLFQVLSALLSENRIDYLKWDHNRLLPIADAAQTEG IYALLRDLRSAFPKVEIESCASGGGRIDAGILSLTQRVWLSDSNDALERMRIQHDAAL LLPLSVTGSHVGPRTCHTSGRTIDIHMRAWVAAQRHMGFEMDPRELTPTEIEALTRVT TWWKNNRNWRMQADILRLDAPDQSVIAEQQMAADASRFVVFAGKARSVHQILPRPLRL TELDPKAQYRIDLVNREALHHLSRGRTALKDGPLTLSGEILMQQGLTLPWQFPETIWV IEGEKL" /EC_number="3.2.1.22" CDS 1053486..1055201 /locus_tag="Silicibacter_1010" /function="COG: Dihydroxyacid dehydratase/phosphogluconate dehydratase" /translation="MTKDRRSRAWYGKLDKDGFIHRSWMKNQGFPDHAFDGRPIVGIC NTWSELTPCNSGLRDLAEGVKRGVWEAGGFPVEFPVMSLGETQMKPTAMLFRNLLAMD VEESIRAYGIDGVVLLGGCDKTTPGQLMGAASVDLPAIVVSSGPMLNGKYRGEDIGSG TDVWKFSEAVRAGEMTLKDFMNAESGMSRSKGVCMTMGTASTMASLVEAMGMSLPTNA ALPAVDARRMALAHLTGKRIVEMIDEDLKPSDVLTKEAFENAILANAAVGGSTNAVVH LLALAGRVGVDLDLRDFEIGSEIPLLVNCMPSGKYLMEDFCYAGGMPVVLKALHEKAH LRSTKTVLGGDITAYAEGAECFNDDVIRSFEAPVKPAAGLRVLRGNLAPNGAIIKPSA ASDHLLEHEGEAYVFESIEDMKANIDREDLPVTPDTILVLKGCGPKGYPGMPEVGNMP IPRKLVTQGVKDMIRVSDARMSGTAFGTVILHVSPEAQAGGPLALVQTGDRIRVSAAG GVLELMISAEEMERRSKAWEPDAPHYTRGYAKLYVDHVLQADKGADLDFLVGKDTRPV TRESH" /product="dihydroxy-acid dehydratase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2410 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1055074..1055973 /locus_tag="Silicibacter_1011" /function="COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /gene="fabG" /transl_table=11 /note=", [EC:1.1.-.-], Short-chain dehydrogenase/reductase SDR, short chain dehydrogenase, kduD: 2-deoxy-D-gluconate 3-dehydrogenase" /note="High confidence in function and specificity" /product="3-oxoacyl-(acyl carrier protein) reductase" /translation="MPPITRGDMRNFMWITSCRPTRARISTSWWARTPAPSQGRATDM DLNATFHDLEGASVFITGGGSGIGASLTEGFLRQGAKVAFVGRSDASAFVDRMAEETG SRPLFIQCDITDIVALKAAISQAAEAHGPIKVLVNNAANDQRHATLEVDEEFWDWSQS INLKAYFFACQAVLPGMQALGGGAIVNFTSISYMMGNSGYPAYTTANSGINGMTRSLA REFGPDRIRVNALAPGWVLTDKQLDKWATPEALAAHLERQCLKDHLAPQDIVESTLFL ASNASRMISGQALVVDGGVVVSG" /EC_number="1.1.-.-" CDS 1055970..1056884 /locus_tag="Silicibacter_1012" /function="COG: 2-keto-3-deoxy-galactonokinase" /translation="MTAPEQTSVDWVAADWGTSHLRLWPMGTDGVPLERIDSDQGMSR LTADDYEQVLLDLLAPYLAPETALDVICCGMVGSRQGWREAPYAASPCAPPSFDTATA VQTDDPRLRVHVLSGVKQLAPADVMRGEETQIAGVLVADPGFDGVVCLPGTHTKWVSL KDGAITGFSTFLSGELFQLISAQSVLRHTLAGAGWDQAAFETGCQQGAARPEFLANAL FGLRAGALLEGLDPVAARARASGYLLGMEVEAMREDWQGRPVAMVGENEIAQAYATAL RLQGASVEILDAQDITLAGLCAARAQMK" /product="2-dehydro-3-deoxygalactonokinase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0785 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1056893..1057498 /locus_tag="Silicibacter_1013" /function="COG: 2-keto-3-deoxy-6-phosphogluconate aldolase" /gene="dgoA" /transl_table=11 /note=", [EC:4.1.2.14 4.1.3.16] [KO:K01625 K01650], 2-dehydro-3-deoxy-phosphogluconate aldolase (EC 4.1.2.14) (Phospho-2- dehydro-3-deoxygluconate aldolase) (Phospho-2-keto-3-deoxygluconate aldolase) (KDPG-aldolase)., KDPG and KHG aldolase, eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase" /note="High confidence in function and specificity" /product="2-dehydro-3-deoxyphosphogalactonate aldolase" /translation="MSRNIIAILRGLTPEEALPVTDALICAGITRIEVPLNSPDPYAS IAAMVAYAADRAMIGAGTVLDQGAVSNLHQIGAQMVVSPDCNPEVIKATKALGMHSFP GVFTPTEAFAALRAGADGLKFFPAFKLGTDGFKALKAVLPPEVATYAVGGVGPENFAQ WQAAGITGFGIGSNLYKPGMHVDEIAANAEAIVRAYDEVFA" /EC_number="4.1.3.16" CDS 1057495..1058340 /locus_tag="Silicibacter_1014" /function="COG: Gluconolactonase" /translation="MTATVFCAETCTLGEGPLWHPERAQLFWFDILGKRMLAREGDDT RIWQFDECVSAAGWIDRDTLLMASETGLWRFDLGTAERRLMCALEADQPETRSNDGRA DPWGGFWIGTMGFEAQKGAGAIYRYWRGELRKLVSDVTISNAICFAPDRACAYYTDTD LGRIMRQPLAPEDGWPLGAPEVFLDLSAEPYGVDGAVVDRDGNLWNAQWGAGRVACYS PTGALLQTVEVPTPQASCPAFGGADLSTLFITTAAEGVDTPPAGQTFTAPTNAVGQRE HQVIL" /product="Senescence marker protein-30" /transl_table=11 /note=", Senescence marker protein-30 (SMP-30) (Regucalcin) (RC)., Senescence marker protein-30 (SMP-30), Senescence marker protein-30 (SMP-30)" /note="High confidence in function and specificity" CDS 1058348..1060255 /locus_tag="Silicibacter_1015" /function="COG: Beta-galactosidase" /gene="bga6" /transl_table=11 /note=", [EC:3.2.1.23] , Glycoside hydrolase, family 42, Beta-galactosidase" /note="High confidence in function and specificity" /product="putative beta-galactosidase" /translation="MKRTLGTCYYPEHWPEEIWAEDAARMKAAGLTWIRIGEFSWSKL EPTPGDLHWDWLDRAIETLGAQGLRVVLGTPTATPPRWMAERHPDMFAVTAEGQPRGF GSRRHYCFSHKGYFAESQRITRLMAERYGANPHVAAWQTDNEYGCHDTVISYSDAAQT AFRAWLAEQFDGEIGALNAAWGNMFWSMEYRSFDEIGLPNLTVTEPNPAHVLAFRRFS SDQVVAFNRAQVEIIKAHSTAPISHNYMGRITDFDHFKLGEDLEIATWDSYPLGFLED RVGASPEEQRAYARQGDPDFQALHHDLYRAVGRGRWWVMEQQPGPVNWAPYNPAPLPG MVRLWTWEAFAHGAEAVCYFRWRQAPFAQEQMHAGLLRPDSQDAPAMQEAMDVAAELG AAADVQPAQAPVAILFDYDADWAWSTQPHGAGLSYFQLILEHYKALRRAGQTIDILPP ETRDFTGYKMILAPGMMHLPEPLKEALARSEAEVLYGPRSGARDGHFSIPTSPLPPAL PGLDVTVARVESLRPDMPIALKGGGAVRGYLEELEGTAEVVFETSEGAAVALRAGRQT YCGGWLDAEGLDRLIATVAQAAGLELRQMPEGVRTRRTATEVFWFNHSAEPVETEVGL LPPAGVKRIAL" /EC_number="3.2.1.23" CDS 1060409..1061641 /locus_tag="Silicibacter_1016" /function="COG: DNA repair exonuclease" /gene="yhaO" /transl_table=11 /note=", [EC:3.1.11.-], Metallophosphoesterase, Calcineurin-like phosphoesterase" /note="High confidence in function and specificity" /product="similar to unknown proteins" /translation="MIKILHTADVHLDSPLRSLALRNAGLRETVAAASRAAFSQMIDR ALSEEVAAILISGDLFDGRERTARTGAFLLAELDRLAEAGIQVYYIKGNHDAENPITG TLDLPQHVHVFDARGGKHQLSEDVWIHGVSFAESHAPESLLPRFKAPVAGAVNIAMLH SSLAGAAGHDVYAPCSVSDLAAMGFDYWALGHIHKRQIHAEAPWVVMPGIPQGRDIGE AGPKSATLLTIEQGQIALSEVPTSVVEFVETELDVTGAANDEALRATLKAHLSVLSAA LVAPTGVVRLTLKGAPARHWQILRDRDVWTEQVHVLAQTCGDLWIDKLIFDLAPEAAQ DTSGASDELAATMATICGEPGFQEHARQYVETVLQDLPATLRERLIADEAARDALVAR LTQAGADRVLAQMKGAES" /EC_number="3.1.11.-" CDS 1061641..1065075 /locus_tag="Silicibacter_1017" /function="COG: Phage-related protein, tail component" /gene="yahN" /translation="MRLKRLSLDRFGHFTDQQFDFGSAHDGHDFHIIYGRNEAGKTTT MEAVLRLFYGFPTREAYAFRHPRNNLQISATLDFNGELRQFTRLPTRSGALVDESGTP LPEAALSAHLAGLSEPDYRRLLCLDDETIERGGEEIANAQGDIGRLLFSAAAGVADLS QVLDGVRSRADEIWKKRARNTRMRELKRALEELDKEIKARDVSANAWKSLKRDLTKAQ QAEEDARTRRDDLNTTRARTEAERRAVPLLAELQELEQALAPFADFPAQLDFNPERLV ELRSDLGSATQNIARLSDELQTLEEEQAALVLDPALEALPAALEALEDLSARHRTAAL DLDRRKAEQQEALETMRQAARDLGLVAENADLAALVLSGADITALQDAREQLRAAITH EGLEAREVEDLEERLRVAQDAVHDCAPLAAEAGQLQELLLNFDAERLATAHAAAAEAI TAAQSRAARSLAALSVRHVTFDTLPHCPSSLRQAQEHADRDAALVQDLRRATETRNQH KEDASARAAQAKALERAANVVSDSEAEALRTKRDALWAVHVDSLDAESAATFHEALSR HDTAADARLTQSRELAQLREIAQSEAASKARAAEAATRITALEEQRDAIAAEVNAAAT QLGLAPLSPAEWRDWVERHETARADAEALRDTKDSHSATFARAQALMDALAERVPSLP ADLDPALAQARRMAEAARQTSEARGAAEKLLRQVERDLNRRQDRHNAAQEAKKKAEDT WRALVQELLAGQVSPESLMASLEPLRVLREHDKTRSAAARRVRMMEADQALFAQEVNA LAQLHGVGVSSDPGQTYGDLKSLAETARIARDKAARLERAIATATAERADNTARVEAI DQELRAIAASFPEPPPAQDIDTLRQCAAQAQKVIADRAARDRLRRQILSELDLSDLES ARAQLAETSVATLNARLESTLSDLTHAEDDLTQAIQQRVNAEHALAEINGDRTAAALV EQKATLELQLEEAALEHLELSLGHHLASDAIKRYRDSHRSGMLTATEQCFADLTQGAY PALSTQIYGDSEVLLAVDRTGASKRADEMSKGTRFQLYLALRAAAHEQLVAQGTILPF FCDDIFETFDETRTSAACQVMEAIGTRGQAIYLTHHRHVVEIAQSVCATPPIIHEL" /product="Myosin heavy chain, muscle." /transl_table=11 /note="Conserved hypothetical protein" CDS 1065136..1066401 /locus_tag="Silicibacter_1018" /function="COG: Diaminopimelate decarboxylase" /gene="lysA" /transl_table=11 /note="identified by match to putative ortholog SPO0334 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="diaminopimelate decarboxylase" /translation="MDHFLYRDGALYAEDVPVAEIAATVGTPFYVYSTATLLRHFRLF DEALEGTDHLVCYAMKAASNQAILKTLAAAGAGMDVVSEGEYRRAKAAGVPGDKIVFS GVGKTAEEIRTALTGGIRQFNVESEPEMDVINAVALELGVTAPITVRVNPDVDAKTHA KIATGKSENKFGIPIAKARAVYAHAASLPGLEVIGIDVHIGSQLTDLEPFRLAYQKVA ELTQALRADGHDIRRLDLGGGLGIPYTRSNEAPPLPVEYGQMIKEELGHLGCEIEIEP GRLVAGNAGLMVSKVIYIKEGEGRDFLILDGAMNDLIRPAMYEAHHDIIPVVEPTPGL EPQPYDIVGPVCESGDTFAKQRLMPPLAAGDLVAFRSAGAYGAVMSSEYNSRPLIPEV LVHGDQFAVIRQRPTFDEMINRDTIPEWL" /EC_number="4.1.1.20" CDS 1066495..1069146 /locus_tag="Silicibacter_1019" /function="COG: Type V secretory pathway, adhesin AidA" /translation="MSEQKTPDGPDHHPVEAALRQLAPLRRALLLTRAGMVAERLWRS FWPLATVLLLAAGLVLLGIFDWVVLEVAWGGAVLVVLGAVAATVWGVMLFRWPKPHEA VARLDETLPGRPIAAILDHQVSGAEDAASVALWQAHQARMAARAAEAEAPAPNLRIAD RDPYALRYVALLVLVTGLLFGTAWRAGRVAELMPGGGNAGLNGPTWEGWVEPPRYTGL PTLYLGDLTEDTLRIPQNSRVTLRFYGDVGDLTLAETVSGRTGELPSASAPEQNFTVT EAGDLTIDGAGGRSWRVEVIRDAPPLVSLAGEPDLSADGTLTLPFNASDDYGVVGGTV TISLDGAALDRRYGLATAPDARDPITLPLPLSLTGDRRLFSEVLEEEFSAHPWANLPV IYSLRAEDAAGQQSVAATLHGPLTARRFFDPMAAALVEQRRDLLWARANGPRVAKILR TLSHRPEELFSDMGNYLQLRTILKRLERYSAHGLSPVHQDEIASALWALALQLEEGDV GDALERMRQAQERLSQAMRDGASDEEIARLMQELREATDDYMRQLSRQAQQQDGDQEG GESSDNAIQLSQQDLQAMMDRIQELMEQGRMAEAEQALREFQQMMENMQVTQGQPGQG DSPGQQAMDGLADTLREQQGLSDQAFRDLQEQFNPNAQRGESQGNEGRDGGLGRGQSH QGGGAGGQDDGPQGEGGQNEGREAEGGQSPSGGQGNGAGDLAQRQQALRDELQRQRDG LPLGGPEGEAARDSLDQAGRAMEGAEEALREGDYAEAIDRQSEAMEALRDGMRALGEA MAEQQQQGQQPGGQQGQSTRQGNALDPLGRDRGGQGSDFFSRDSIGEGQAYRRAWDLL EEIRRRAGERERSESERNYLQRLLDRF" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0335 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1069328..1070242) /locus_tag="Silicibacter_1020" /translation="MRLICPNCGAQYEVPEDVIPQDGRDVQCSNCGDTWFQPSTQMMA EEAEARAATPPPATEAGSVDAAHTREDALQEPPQDAWPSAPEPEPAAAEEHWHEDPDA PAPGTPPAAPPEPEADPAPAKRRLDPEISRVLREEAMREEALRSGRDSLETQPELGLE DLPEDEAARRARQSEERVARMQGLDPAPQAHAAPLDRDRLDPQPGSRRGLLPNIEDVA TNAPGETKPATPPPADAPAPPARKRGFSRGFLLVILLMALAILVYSNAAMIAESLPQA DPYLSSYVAWVDQWRLWLDAQAQALAAE" /product="MJ0042 family finger-like domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO0336 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1070468..1071145 /locus_tag="Silicibacter_1021" /function="COG: ABC-type sugar transport systems, ATPase components" /gene="ftsE" /translation="MIELENVGYNYGGGELFSDLSVQLAPGSFHFLTGPSGAGKTTLL KLCYGALTPTAGRVRAFNMDVKGLDRDQMAYLRRRVGVVHQDCRFLDHLPVVENIALP LTVSGRGLLEEQANLHELMNWVGLAERMDALPPELSGGERQRAALARAVILSPDVIIA DEPTGNVDWEMSQRLLRLLVELNHMGKTILVATHDLPLIRAAKNQVQARVLRISNRQL ISAGADL" /product="cell division ATP-binding protein FtsE" /transl_table=11 /note="identified by match to putative ortholog SPO0337 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1071142..1072035 /locus_tag="Silicibacter_1022" /function="COG: Cell division protein" /translation="MNALRKLILGDAQADRVVPPSGFTAQLTLFVSGAMAFLCVFALA LSLASGRVADRWSDELARAATLRINAPAEQRVAQTEAALRILRQTPGVANARALTQDE QAALLQPWFGAGIPLDTLPVPQLIEVTEDTPGYDAQGLRLRLQAEVPGAVLDDHARWR RPLVEAAIALRRLGVVSILLIGGAMAAMITLAANAALAANAQVIEVLRLVGAQDSYIA QAFVRRFTLRALFGATVGVVLGMLGVFLMPEASEEGGFLTGLGFQGWRWLLPLAIPPL AALVAFVATTRAARKRLGDLA" /product="cell division permease protein FtsX, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0338 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1072032..1072781 /locus_tag="Silicibacter_1023" /function="COG: 1-acyl-sn-glycerol-3-phosphate acyltransferase" /translation="MTLAFQYLRSLLYMIQIYVAMLVLGIAFAPYALLSKNGARQACK TYARWAIWSARWMVGIRCEVRGPVPQGEVLVAAKHQSFLDILVIFNALPQAKFIMKQE LMWTPIIGIYAKRLGCIPVNRGKRGAAIARMIKDVAREFSEPGQLVIYPQGTRVAPGA QKPYKVGSGVLYEELKQPCVPVATNVGLLWPRTGLLRKPGLGVVEFLDPIAPGQARDS FMAELEQRIEARSDALMAELGFEQDGRDRIH" /product="acyltransferase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0339 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1072759..1073364 /locus_tag="Silicibacter_1024" /function="COG: Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase" /translation="MDAIESIEDLEALYGTPGAPSLRKVARQMTPLYRKWIMASRLCM LATVGPEGTDDSPRGDDGPVVLELDPGTLALPDWRGNNRIDSLRNIVRDGRVSLMFLV PGLNNVVRVNGSAIVTADPDLLQRFDKAGKLPRTVIVIKINEIYSQCARALMRARTWT SGDESEGLPSMGDILAEQTAGEEGGRSYDEAWAPRAAKTMW" /product="pyridoxamine 5'-phosphate oxidase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3596 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1073415..1073840) /locus_tag="Silicibacter_1025" /translation="MGLGAASQIWPTHSRAERIAELFYGICLAPVLTGDSPDTLLSGL FQKPDKSWIDTQSGSFLRLEDSRCTISTYAPYALSYEDAAELLELTRIIVSRDFPQLV FDPKAKMGDEALSKGWFLGAPQSPERWGIFHVAYPDWGG" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(1073941..1074255) /locus_tag="Silicibacter_1026" /translation="MTLSLQVLYPASDEATFDYDYYVETHLPLIEEHWGDLIETVEAS RGLAGGPDVPPPYLLIATITFPDQDALNTAMGEKGGVIIDDVANFTNIRPQILVGELL MS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0315 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1074345..1075742) /locus_tag="Silicibacter_1027" /function="COG: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes" /gene="lpdA" /transl_table=11 /note="identified by match to putative ortholog SPO0340 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="2-oxoglutarate dehydrogenase, E3 component, dihydrolipoamide dehydrogenase" /translation="MASYDVIVIGAGPGGYVSAIRCAQLGLKTAIVEGRETLGGTCLN VGCIPSKALLHATHMLHEAEHNFGAMGLKGKSPSVDWNQMKSYKDEVIGQNTGGVEFL MKKNKIDWIKGWASIPEAGKVKVGDDTHEAKNIIIASGSVPSALPGVEVDNDKGLVVD STGALELPKVPKKMVVIGAGVIGLELGSVYARLGAEVTVVEYMDAVCPGMDKDVQRGF KRILEKQGLSFIMGAAVKGVETTKSKAKVSYEPKKGGDAEVIEADVVLVATGRKPYAE GLGLDALGVKMTERGQIATDAQWATNVKGIYAIGDVIEGPMLAHKAEDEGMAVAEVIA GKHGHVNYGVIPGVVYTTPEVATVGATEDALKAEGRKIKVGKFMFMGNARAKAVHQAE GGFVKLIADKETDRILGAAIIGPGAGDLIHEICVAMEFGASAEDLALTCHAHPTYSEA VREAALACGDGAIHS" /EC_number="1.8.1.4" CDS complement(1075883..1076443) /locus_tag="Silicibacter_1028" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MSITRHILRLGLLGLGLGVAIFAYTKVMARTGSGTPPPMAEAHQ QADEILVIKSTRALHLLRDGETIRSYDISLGAAPEGHKQSEGDERTPEGRYEIDWRNP NSIAHLSLHISYPNAADQAAAKAAARDPGGNIMIHGLPNGWGALGALHLMLDWTDGCI AVTNAEMREIWSLVPDGTPITIAEAL" /product="Hypothetical protein yafK precursor." /transl_table=11 /note=", ErfK/YbiS/YcfS/YnhG" /note="Conserved hypothetical protein" CDS complement(1076440..1076850) /locus_tag="Silicibacter_1029" /function="COG: Predicted membrane protein" /translation="MTPELTALTLAALLQVFQIALMAVPANLELKPGQTLGPRDRDRM GGDLQDMVSKRTARLFRAMNNHFEGLILFSIACVVVTLSGQSSLFTTVCAFAYLGSRV LYIPAYAFGWVPWRSLIWAVGYLATAAMLVAALI" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1076852..1077244) /locus_tag="Silicibacter_1030" /translation="MTPELSALAATVLIHVVTVIWSQRALEADIGRDGNVGTRENLDE RLSERSNRLRRALANHTENIGPFIIAVLLLTLTDNASSLTAICAWTYVAARALYVPAY AFAWVPWRSVIYVIGLLATLLMIGASFF" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1077241..1077768) /locus_tag="Silicibacter_1031" /translation="MTPPQPDIEIRAELVRLIEGLDYFRTWRIAQLEATLPAGETLDL DTVVVPGSFFLDLYDQQSRKSDRKQILKEVQNWYAHTANEFHSFMKSGEQEVVQDINA FLARFRADIGFDFFSESGLIRKTMNKAVKRGKLVNDAEWYVLQEFVVDGTEGDFTREE TTHIRHLISEYEGAQ" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(1078227..1079732) /locus_tag="Silicibacter_1032" /function="COG: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes" /gene="sucB" /transl_table=11 /note="identified by match to putative ortholog SPO0343 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase" /translation="MTTEVRVPTLGESVTEATVATWFKKPGDTVAADEMLCELETDKV TVEVPAPAAGTLAEIVAKEGDTVGVDALLANITEGGAAAASAPAAKPAPAEAPASSGG DAVDVMVPTLGESVSEATVSTWFKKVGDSVAQDEMLCELETDKVSVEVPAPAAGVLAE ITAPEGTTVDASAKLGVISGDGAAVAAAPAAAPAAAETPAAVSKDVANAPSAEKAMAE AGLSASDVKGTGRDGRIMKEDVASAIAAAKSAPAPTAAPAAPRAPVSADDASREERVK MTRLRQTIAKRLKDSQNTAAMLTTYNEVDMTEVMALRNEYKDLFLKKHGVKLGFMSFF TKACCHALKEVPEVNAEIDGTDIVYKNFVHMGIAAGTPTGLVVPVIRDADAMSFADIE KAIAEKGARARDGKLSMAEMQGGTFTISNGGVYGSLMSSPILNPPQSGILGMHKIQDR PMAINGKVEIRPMMYLALSYDHRIVDGKGAVTFLVRVKEALEDPRRLLMDL" /EC_number="2.3.1.61" CDS complement(1079747..1082698) /locus_tag="Silicibacter_1033" /function="COG: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes" /gene="sucA" /transl_table=11 /note="identified by match to putative ortholog SPO0344 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="2-oxoglutarate dehydrogenase, E1 component" /translation="MTEQSPNDIFHASSFMQGHNAEYLEQLYAQYANDPNAVDAAWAE FFRAMGDADGDVKAEAAGPSWARNDWPPAPADDLTAALTGEWPAPVEAKAAGKKIADK AKEKGVEVSDEAIQRAVLDSIRALMLIRAYRIRGHLAADLDPLGMRAATPHPELDPKS YGFDGADMDRPIFIDNVLGLEVATMRQIVDIVKRTYCGTFALQYMHISDPEQSAWLKE RIEGYDKEITFTREGRKAILNKMVEAEGFEKFLHVKYMGTKRFGLDGGESLIPAMEQI IKRGGNLGVKDIVIGMPHRGRLSVLANVMQKPYRAIFNEFQGGSFKPEDVDGSGDVKY HLGASSDREFDGNSVHLSLTANPSHLEAVNPVVLGKVRAKQDQLGDKDRTAVLPILLH GDAAFAGQGVVAECFALSGLRGHRTGGTMHIVVNNQIGFTTAPHFSRSSPYPTDNALV VEAPIFHVNGDDPEAVVHAAKVATEFRQKFHKDVVIDIFCYRRFGHNEGDEPMFTNPL MYKKIKGHKTTLSLYTERLVKDGLIPEGEIEDMKAAFQAHLNEEFEIGKTYKPNKADW LDGRWSHLDSKDEDYQRGETAIKPETLEEVGKGLTTLPEGYPVHKTIGRFLDARKKMF ESGEGFDWATGEALAFGSLLTEGYPVRLAGQDSTRGTFSQRHSGIVNQDTEERYYPLN NIRAGQANYEVIDSALSEYAVLGFEYGYSLAEPNALTLWEAQFGDFANGAQIMFDQFV SSGESKWLRMSGLVCLLPHGFEGQGPEHSSARLERFLQMCGQDNWIVANCTTPANYFH ILRRQLHRTFRKPLILVTPKSLLRHKLAVSKAHEFTTGSSFHRVLWDDAETGLSETKL VEDKKIKRVVLCSGKVYYDLLEERDARGIDDVYIMRIEQYYPFPAISLVKELERFKGA EMVWCQEEPKNQGAWTFIEPNIEWVLTRIKAKNTRPIYVGRATSASPATGLASEHKAQ QAALVNEALSI" /EC_number="1.2.4.2" CDS complement(1082940..1083827) /locus_tag="Silicibacter_1034" /function="COG: Succinyl-CoA synthetase, alpha subunit" /gene="sucD" /transl_table=11 /note="identified by match to putative ortholog SPO0346 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="succinyl-CoA synthase, alpha subunit" /translation="MAVLIDENTKVICQGLTGSQGTFHTEQAIAYGTKMVGGVTPGKG GQTHLDLPVFNSVHEAKHVTEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPV LDMMKVQRALEGSKSRLIGPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYE AVKQTSDIGLGQSSAVGIGGDPIKGTEHIDVLDMFLDDDETQSIIMIGEIGGSAEEEA AEFIAEQKKKGRWKPIAGFIAGRTAPPGRRMGHAGAIVAGGKGGAEDKIEAMKSAGIV VADSPATLGEAVQKAIANG" /EC_number="6.2.1.5" CDS complement(1083846..1084628) /locus_tag="Silicibacter_1035" /function="COG: Glycosyltransferase involved in LPS biosynthesis" /translation="MQATLRDAGLDAEFVSAVDLAETSEEELLQQCKSFGPWGVFAHG NMACTLSHAKVWEQFLASDADVALIFEDDVFISAELRQWTEDLSWWPQGCELVNLEFW RSETLKVMVGTSASQHLGRQVAPMLSRNPGSAGYLVSRKGAEALLASRPFTMSIDQLL FNPLVSPLAVSLEPHQITPALVTQGNTPPEEGTFLGHAQRKPKGALYRKQKRLRGMAE LRALPLHLLRLISGRARLVRVLYADRALTDDSAARAAEAQTA" /product="Lacto-N-neotetraose biosynthesis glycosyl transferase lgtB" /transl_table=11 /EC_number="2.-.-.-" /note=", Lacto-N-neotetraose biosynthesis glycosyl transferase lgtB (EC 2.-.-.-)., Glycosyl transferase, family 25" /note="High confidence in function and specificity" CDS complement(1084744..1085937) /locus_tag="Silicibacter_1036" /function="COG: Succinyl-CoA synthetase, beta subunit" /translation="MNIHEYQAKALLRSYGAPVSDGRVVMKADEAKTAAGELDGPLWV VKAQIHAGGRGKGSFKEADAGEKGGVRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQ VNRIYIEAGSGIQTELYLALLVDRVTSRVSFVCSTEGGMDIEEVAAETPEKILSFSVD PATGYQAYHGRRVAFSLGLEGAQVKQCVKLMGQLYQAFIEKDMEMLEINPLIVADNGD LKVLDAKVGFDGNAIYRHADIAALRDETEEDPKELEASKYDLNYIALDGEIGCMVNGA GLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDKNVKGILVNIFGGIMR CDVIAEGVIAAVKEVGLEVPLVVRLEGTNVEKGKEIIANSGLNVIAADDLSDGAEKIV KAVKG" /product="succinyl-CoA synthase, beta subunit" /transl_table=11 /EC_number="6.2.1.5" /note="identified by match to putative ortholog SPO0347 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1086747..1087691) /locus_tag="Silicibacter_1037" /translation="MPLERSVFRPFYKPPFNGSAFIAPRILISKDMIYLKNLLRPRQT KNREGEGFVFATTGLQYTNLARRAARSLKLAMPKAQIDLCTDQKIEDPIFDKIHPVTH RGPRPKMEALLSSRFEKTIYLDADVVVVEDISDVFDLLDTHPIAAALGVSRSRTEMTS YRKDIPHAFPVLNSGVFAIRRTPQTLAFWEDWDRNYARSKIGKDQPVLRATLYEHQLM PLVLPPEYNLLKQSLLDKWGRINGGIRCLHVRALHDVAHPNTDEPIGLQEVVRPRHLQ TMIKAREADRSLKGSSRIYDLPPARQRVKPNKTARIKL" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(1087747..1088709) /locus_tag="Silicibacter_1038" /function="COG: Malate/lactate dehydrogenases" /gene="mdh" /transl_table=11 /note="identified by match to putative ortholog SPO0349 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="malate dehydrogenase, NAD-dependent" /translation="MARPKIALIGAGQIGGTLAHLVALKELGDVVLFDIAEGTPEGKA LDIAESGPSEGFDASLKGTQDYADIAGADVCIVTAGVPRKPGMSRDDLLGINLKVMKS VGEGIRDNAPDAFVICITNPLDAMVWALREFSGLPHEKVCGMAGVLDSARFRHFLAEE FNVSMKDVTAFVLGGHGDTMVPSVRYSTVAGIPLPDLIEMGWTTQDKMDAIVQRTRDG GAEIVGLLKTGSAYYAPATSAIEMAEAYLKDQKRVLPCAAYVDGALGLNGMYVGVPTV IGAGGIERVVDIKLNAEEQAMFDTSVNAVKGLVDACKGIDSSLA" /EC_number="1.1.1.37" CDS complement(1089579..1089890) /locus_tag="Silicibacter_1039" /translation="MKKTLFTFAAGLALVLSSQMSAAQSQNCAPREMVVKRLAEKYGE SRQSIGMGQQGMVMETFASAETGSWTITVTTPNGMTCLVASGQSYEVLAEALPAMDTD A" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0351 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1090253..1091107 /locus_tag="Silicibacter_1040" /function="COG: Citrate lyase beta subunit" /gene="citE" /transl_table=11 /note="identified by match to putative ortholog SPO0352 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="citrate lyase, beta subunit" /translation="MDPRARPYRSVLYIPGSKPRALDKARTLPVDAIIFDLEDAVSVE EKENARTTLADALAAGGYGARMKIVRINGLDTAWGHADAEAAARMGCDAILLPKVSSP ADLDALAEITGDVPLWAMMETPRGMLNAAEIAAHPRLQGMVMGTNDLAKDMQTRFRAD RLPLMSGLGLCVLAAKAEGKIIVDGVFNAFKDVEGLAAECAQGRDMGFDGKTLIHPAQ VDVTNEAFAPSAAEMDLARRQIAAFEEAEASGQGVAVVDGKIVENLHVVTAREILAKA DAIAAISG" /EC_number="4.1.3.34" CDS 1091173..1091721 /locus_tag="Silicibacter_1041" /function="COG: Predicted membrane protein" /translation="MALLILGIILWWGAHLFKRVAPAQRASLGDKGRGLVALVLLVSV VLMVLGYRGTEYIHVWAPAPFLVHVNNTLMLFALYFTSPGPNKGALFHKMRHPMLTGF KIWAVAHLLVNGDLASVILFGGLLAWAVVEVITINKSEPNWQPNPKGSLAKDAMFFVA SIVLLGVIGYIHGLVGPSPFPG" /product="NnrU family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0353 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1091726..1091929 /locus_tag="Silicibacter_1042" /translation="MKLYRFLSEDDTSAFCHKVTDALNKGWELYGSPTQTFDPVKGIM RCGQSVVKEVDGTYTPDTKLGAH" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0354 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1091931..1092971 /locus_tag="Silicibacter_1043" /function="COG: Acyl dehydratase" /translation="MSKTNHGRFFEDYKLGEVIRHAVPRTVSGGERALYHALYPARHA LYSSDEFARSVGLTHDNGAPLEDLAAFHIVFGKTVPDISLNAVANLGYAEGRWLLPVY PGDTLRAESEVIGLKQNSNGKTGVVWVRTRGLNQRDDCVLEYVRWVMVRKGNLDADAP ETCVPELKPALAAEDLALPAGLDFTSYDFALAGEPHRWGDYAIGEQIDHVDGVTVEEA EHMLATRLWQNTAKVHFDSTARPDGSRLIYGGHVISMARALSFNGLANAQMIVGLNGG AHANPCVSGTTIRAWSEVLDKAQTAAPGVGAIRLRLVATSGGAPFALKGADGKYVPEV LLDLDYWALMPL" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0355 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1092971..1093642 /locus_tag="Silicibacter_1044" /function="COG: Fructose-2,6-bisphosphatase" /translation="MQTGKGALPPRAASDEAALTPGIFWVRRGGASVAQVLYLTHPEV GIDPAVAVPDWGLSAHGAARVADLAKRGAWNGWHVVTSAERKALETAWPLAAAAGSAV EVRPDMHENDRSATGYLPGAEFEAVADAFFAYPEVSVRGWERAVDTQARIIREVQAVL AAQRGRDVIFCGHGAVGTLLYCALAGEAISRRWDQTGGGHYFSFDLEHMTPMTHWQAL ETLWR" /product="hypothetical protein" /transl_table=11 /note=", Phosphoglycerate/bisphosphoglycerate mutase" /note="Hypothetical protein" CDS 1093865..1094248 /locus_tag="Silicibacter_1045" /function="COG: Succinate dehydrogenase/fumarate reductase, cytochrome b subunit" /gene="sdhC" /transl_table=11 /note="identified by match to putative ortholog SPO0358 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" /product="succinate dehydrogenase, cytochrome b556 subunit" /translation="MADVNRGKRPLSPHLTIYRPQLTSMSSIMVRITGIAALAVALLV VWWLLAAATSESAFAFIDGLLRSWLGDIVMLLAAWAIFYHMLGRLRHVVWDFGYCLEV ETSEKLGVGMFIGATVLTVLAALVV" /EC_number="1.3.99.1" CDS 1094263..1094634 /locus_tag="Silicibacter_1046" /function="COG: Succinate dehydrogenase, hydrophobic anchor subunit" /gene="sdhD" /transl_table=11 /note="identified by match to putative ortholog SPO0359 from Silicibacter pomeroyi DSS-3" /note="Specificity unclear" /product="succinate dehydrogenase, hydrophobic membrane anchor protein" /translation="MNYLTDRKRAEGLGAGGAGTHHHWQMMVSSILLVVLVPAFVITF GLGLGGTYEEVLAYYGRPVPAIITGLTLVVGIIHLMREAQVAVEDYMHGLAEKLTLIA VAALSYTMIAAGLFALVKLAL" /EC_number="1.3.99.1" CDS 1094659..1096467 /locus_tag="Silicibacter_1047" /function="COG: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit" /gene="sdhA" /transl_table=11 /note="identified by match to putative ortholog SPO0360 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="succinate dehydrogenase, flavoprotein subunit" /translation="MTAAYEYETHEYDVVVVGAGGAGLRATLGMAEQGLRTACVTKVF PTRSHTVAAQGGIAASLGNMGPDSWQWHMYDTVKGSDWLGDTDAMEYLAREAPKAVYE LEHYGVPFSRTEEGKIYQRPFGGHTTEFGEGPPVQRTCAAADRTGHAILHTLYGQSLK NNAEFYIEYFAIDLIMSEDGQCQGVVCWKLDDGTMHVFNAKMVVLATGGYGRAYFSAT SAHTCTGDGGGMVARAGLPLQDMEFVQFHPTGIYGSGCLITEGARGEGGYLTNSEGER FMERYAPNYKDLAPRDYVSRSMTMEIREGRGVGEHGDHIHLNLSHLPAEALAERLPGI SESAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNYWGEVLNPTEDNPTGVVPGLMAVGE AGCASVHGANRLGSNSLIDLVVFGRASAIRAGKVVDPEAPNPVLNQASIDKAFDRFDG LRNAKGGTPTAELRLEMQRTMQADAAVFRTDKTLKEGVEKMEVIAAKLDDLHVTDTSL VWNSDLMETLELTNLMPNALATIVGAEARKESRGAHAHEDYAERDDENWRVHTVARVE GNKTSLSYRPVIVDPLTNEDAGGISLKKIAPKARTF" /EC_number="1.3.99.1" CDS 1096531..1097340 /locus_tag="Silicibacter_1048" /translation="MRRVWREIGEALSIPFVPVHNPQNWTRIPTKGRVIVANWGARFA PDLFDTPEARFLHVIRDPRDVLISGARYHEDAPGRSERFLHKARADLGGLTYQQHLRS LPSRDDKLRFEMGEMHQRTLTEMLDWPYGHPRAFDVTFETLMADTGCETFAAALEFFG FDAPEVEVAQKIFFKHALFGGFSDKNSDGTTDRRLNAHVAPGAKRGWRQVFSAEIAED YCARFGAALVRLGYETDARAWCDAIAPKTAIPEPAHMVQPPPLGLAMGGMA" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1097337..1098203 /locus_tag="Silicibacter_1049" /translation="MTSVAAFATSPNAWEALGIRPARALRMIGMRRSGNHAIANWLQR NAERAVFLNNCRPTRDPLLSHNGIEVGGARFAGDPVEAAAEAGEGALLLVSYEDTIHQ RFVTKDNLSGPYKSANFSAELLIYRSFLNWSASLLKKLQRNESYRAADRMAVAARAVA TYGDLLVEVLEAPQDGRVAICYDAWAQDELYRARLLSDLGLSLRDNSLGDVQPYGGGS SFQDSATDPAELQPSARWREMARDPEYQALLQVAALDRAFMDRVDALFPADAALMARL PDLPALDVEADL" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1098200..1098316 /locus_tag="Silicibacter_1050" /translation="MTSRPMNTRSDCARNDARICPGPALSPHVLPLAAHVGS" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1098333..1099112 /locus_tag="Silicibacter_1051" /function="COG: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit" /gene="sdhB" /transl_table=11 /note="identified by match to putative ortholog SPO0361 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="succinate dehydrogenase, iron-sulfur protein" /translation="MVEFALPKNSRITTGKTWPKPEGATNVRKFQIYRWNPDDGKNPS VDTYFLDMDKCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIY GLDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSIED RKKLDGLYECVMCASCSTSCPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDNL EDPFKLYRCHTIMNCAKTCPKGLNPAKAIAHIKKLMVERTV" /EC_number="1.3.99.1" CDS 1099690..1099854 /locus_tag="Silicibacter_1052" /translation="MTPTALDQAEAALSPAAVALAVLEESWAYYTPEAPVVSRDIDAV DGVLAYYEAA" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1099915..1100103 /locus_tag="Silicibacter_1053" /translation="MPVLLLLLLLGVLGYLFWRRKTTTLTRDCRWRRAPGGNGWHCAF CGASDPDPTPPRDCQRPR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1101499..1102623 /locus_tag="Silicibacter_1055" /function="COG: Transcriptional regulators" /translation="MVLSTVSFMTDPPLSRTGYGCGDCFGARNASKTHQMTHRFPIKE IARQAGLGTATVDRVLNDRAHVSPQTKLRVTAAIKELKAQEAQLAAHGRRLFFDFVVE APSRFSLEVKAAAEAVLPQIGTAVCRPRFLLQEIMEEDEVVGALKRIMKRGSQGVCLK ARDTARIREAAKTLTAAKIPVVTLVTDIGGTDRLAYVGLDNAGAGRTAAYLISRALGD VQGMVLATRSHERFLGEEEREFAFVETLARERPGLQVFAVQGGSGVDFETSKLLTKSM VGIHHLRAVYSMGGGNLSILRTLEHKGLSPDVYVAHDLDRENRELIQDRRIDFILHHD LQLDVRNTFNAFLSYHGLSSGLVGAPISTVQVLTPENIPR" /product="HTH-type transcriptional repressor purR" /transl_table=11 /note=", HTH-type transcriptional repressor purR (Purine nucleotide synthesis repressor)., Bacterial regulatory protein, LacI" /note="High confidence in function and specificity" CDS complement(1100343..1101524) /locus_tag="Silicibacter_1054" /function="COG: Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin" /translation="MKDTVDNTIAYYDPDNCDLGEFKALIGQATRSEQVPLAAAIEKN IPIYDMAKLRPALEDDRTRRGIMAEWAQVLRSGAGVVALKGAYADTAVLDEATRIYEG IIAEEKQGTGGAGDHFAASGANDRIWNSLQKLCEASPDAFLNYFANTSIAAVCEAWLG PNYQMTAQVNLVHPGGAAQQAHRDYHLGFQTSDVSASYPAHVHDVSPILTLQGAVAHS DMPLESGPTKLLPFSQAYRPGYAAWRRDDFRALFEEHHVQLPLAKGDAVFFSPALFHA AGANTSHDIHRFANLLQVSSAFGRAMETVDRDRMCRLIFPYAFQAKQTNKLSVAELSA AIAATAEGYSFPTNLDRDPPTNGLAPETQAAFFRRALVEGIEEHAFAERLDQMSSARM A" /product="Phytanoyl-CoA dioxygenase, peroxisomal precursor" /transl_table=11 /EC_number="1.14.11.18" /note=", Phytanoyl-CoA dioxygenase, peroxisomal precursor (EC 1.14.11.18) (Phytanoyl-CoA alpha-hydroxylase) (PhyH) (Phytanic acid oxidase) (Lupus nephritis-associated peptide 1)., Phytanoyl-CoA dioxygenase, Phytanoyl-CoA dioxygenase (PhyH)" /note="High confidence in function and specificity" CDS complement(1103366..1104154) /locus_tag="Silicibacter_1056" /function="COG: Integrase" /translation="MARALARPDKLYPSVEEAQAMVQSMPSLTLAQRRDRAIVACAFL TGLRAAALSSMRLKHIDCEAETAVQDAREMRAKNGKSFTVRWFPVPSEISLVVVEWKR ELESNGFGGEDALFPDSKYLSTPKTSPAPLPILETSGAVNKAFRIASTGVGQSYSPHS ARHCLKALGDQICTRSEERKAWSLNLGHESMVITEAHYGKMTEATRMQVLAAIKQKDE TSDDEKDLMLRYLLHALTPGSPEYRAARQLVRQREAALDDGVLE" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", DNA breaking-rejoining enzyme, catalytic core" /note="Hypothetical protein" CDS 1104368..1104634 /locus_tag="Silicibacter_1057" /translation="MKASKFTDAQKAFIIKQAEDGTSVAEVCRKAGISTATFFNWKKK YAGLMPSEMKRLRELEQENARLKKIVADLALDKEMLQDVIKRKL" /product="Insertion element ISR1 hypothetical 10 kDa protein A3." /transl_table=11 /note=", Transposase IS3/IS911, Transposase" /note="Conserved hypothetical protein" CDS 1104667..1105464 /locus_tag="Silicibacter_1058" /function="COG: Transposase and inactivated derivatives" /translation="MRADWQVSIRRACEVIRFDPRTYRYKSRRPGQAALEQRIREICQ TRVRFGYRRVHVLLRREGWEINAKKTYRIYKELGMQLRSKTPKRRVKAKLRDDRKEAV SPNDVWAMDFVHDQLATGWKLRVLTVVDTFSRYVPVLDARFTYRGEDVVATLEQVCKR TGYPATIRVDQGSEFISKDMDLWAYANDVTLDFSRPGKPTDNAFIEAFNGRFRAECLN AHWFMSLEDAAEKLEAWRRDYNEERPHGAIGNKVPADLMKSVHDTSP" /product="Insertion element IS476 hypothetical 39.2 kDa protein." /transl_table=11 /note=", Integrase, catalytic region, Integrase core domain" /note="Conserved hypothetical protein" CDS complement(1105734..1107686) /locus_tag="Silicibacter_1059" /function="COG: Transketolase" /gene="flgF" /translation="MTFTPLIPSSGVAGWNFLQSTYDRQYDAFVQSGKLKNDSEYFAE NIGEVTSSEDLLNDRRLLQVAVKAFGLEEEINYRALLQRALNEGTSASDALANTMNDE RYVEFSNAFGFGPGQSPMTSDSKAMQAVIDKFQSASFEEAVGEVDETMRTALFAKRAM IEVFGEPDEDDVSQLSVRERALREFDLAMKEINGKDDDVPGVTSVEDQWEDIIERDTL REFFDTTLRISAGAAGLEDDERIQLYRERAQIIFGTDDPTVFFSAENKDTIISAFKTR ATVNGDDAAETAKTAELSEHILDQMISRDAALNEEWDFISRQEPLAEFMKTALELPDD IATRETSEAMRIYREKAIEAFGTDDPNVFASAANLDATLEVYRENATNAGLSSSEISS NLRTAETILKFSYNQGDAIDGGDADAAATAEIDAGWYSVMGQTGVPRFLNTALDVSSA LAPGEIFSDLTIDEQLTIYKDKAVELFGTADLKELTGPYQIGAVNDAYRTNAEAAGES EFFITYYSDIAERELNTLFQSDDTDAEKAFEEALEELRTMNDEDNGPSANSQWFTIMG QQAMTDFMQVALGLPKEVGQMDIDQAVEVYKRKAQQVLGTDKPSEFISGDKMDELVNM YLTRSQMNNLSSGYSSGSAALMMLRG" /product="conserved hypothetical protein" /transl_table=11 /note="homology to flgF protein, belas" /note="Hypothetical protein" CDS complement(1107683..1108087) /locus_tag="Silicibacter_1060" /function="COG: Flagellar biosynthesis regulator FlbT" /gene="flbT" /translation="MSGLVLKLAPKERVLVNGAVIENGDRRSRLSIVTPDAHILRLRD AIHPEQANTPVRRVCYAAQLVLSGDVDPEEDRLPMLRRIEELSQVFTDPDSRAALSEA TEAVISNNHYRCLKALRALLPREERLMAVRAQ" /product="Probable flagellum biosynthesis repressor protein flbT." /transl_table=11 /note="Flagellar FlbT, Flagellar protein FlbT, belas" /note="Conserved hypothetical protein" CDS complement(1108090..1108461) /locus_tag="Silicibacter_1061" /gene="flaF" /translation="MNALLKAKSAYAAAKAPTRTARNTEYEILARITHRMIVADSKGS DGFKDLVAAVSDNRKLWTLFTSDLAKEGNKLPTELKQRLFHLARFTREHTSKVLARKA SVQPLVEINTAIMRGLRSGAS" /product="FlaF protein." /transl_table=11 /note="Flagellar FlaF, belas" /note="Conserved hypothetical protein" CDS complement(1108548..1109396) /locus_tag="Silicibacter_1062" /function="COG: Flagellin and related hook-associated proteins" /gene="fliC" /translation="MSSILTNNGAMVALQTLKSVNNNLNDTQKAISTGKEIGVAKDNS AVWAISKTMESDIAGFEAIEEGLSIGEATVAVASAGAEQIVEKLTEIKELVVSAQSEN VDHAKIQDDISSKVDQVAAIISAAQFNGANLLAFDVDGNGSTGVGVLASLDREGAGGT VTAVEITVDSVNFESSLNLSASLTSITDTTTAATALGEIEVLLQVAITGAAALGADSA RLDDQSEFVSNLVDSMTMGVSTMTDTDMEEASARLSALQTQQELAVQSLTIANEAPGT LLQLFR" /product="Flagellar filament 33 kDa core protein (Class B)." /transl_table=11 /note="Flagellin, N-terminal, Bacterial flagellin N-terminus, belas" /note="Conserved hypothetical protein" CDS complement(1109612..1109980) /locus_tag="Silicibacter_1063" /translation="MSALTDQTPQAIIDALDVLLEEERGALTNGELDKLEGILARKED LFDQLNSMTDIDHGALDSVQSKVSRNQALLGSAMQGIKAVANRMAELRKVRKGLDVYN RSGQRTSFATTGSLKLEKRA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3460 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1109977..1110267) /locus_tag="Silicibacter_1064" /gene="flgJ" /translation="MPVTHVSTPSAAAPIAQASNPKDQALRQAAIDLEASFLSEMLKA AGLGKAPEAFGGGSGEDQFAGLLVNEQARAMAEAGGIGLAESIYNSLKDSQE" /product="Peptidoglycan hydrolase flgJ" /transl_table=11 /EC_number="3.2.1.-" /note="Peptidoglycan hydrolase flgJ (EC 3.2.1.-) (Muramidase flgJ)., belas, ," /note="Specificity unclear" CDS 1110393..1111979 /locus_tag="Silicibacter_1065" /function="COG: Nucleotidyltransferase/DNA polymerase involved in DNA repair" /gene="fliK" /translation="MIDKILTTQSVGSTSTESSKRTEPARRGGDSFESVLAREAKTKD KTKTSPDVETPSGAEHDDKAFDAKNNAKATAADQHAKGEESHPEQDAGETSLVAPDEN PESEWASVIDTATQPDVEEALDEALPELDTSAEDFAQADVAEGQAVAAAGATQVSSDQ SAKGSGDQVMRAGAPVTHGSATDKAVEVAIKGAASAEADAEMNSMEAARTGLLSDKDE RLGTSVLLETHRDGRRQQLVPGTVGAIAAEKGAQPPAQAQAQTALEALKTGAPTSPPG QEKATEARIRDIPLTAAQAQVAASTATARAPMNSGDTRLLHPAASGSAQALASARFQM SDTVLKSSSAVVTSLMGANDAGRVGDDVLTQRGAESFALPQLLAEASVRSGASSFRAE TPRHVAQQLAEAVATGGKRNVDVTLNPRELGHVNMRVMTTEMGVTITINAERPETEDL MRRHIQDLAREFKEMGFTDISFQFGSDTDAGQSGEGESSLGGNGSEQQGEGDALEAAQ SGLPISQHLNISADGLDMRI" /product="flagellar hook-length control protein" /transl_table=11 /note="homology to fliK protein, belas" /note="Hypothetical protein" CDS 1111984..1112679 /locus_tag="Silicibacter_1066" /function="COG: Flagellar hook capping protein" /gene="flgD" /translation="MTTAVTGVGTQQTTTAGGTAGTQSATSALTSDFETFLRLMTTQA KYQDPLEPMDSSDYTAQLAQFSSVEQQVLTNETLTSMLTALSLSNMSQLTGWVGREVR AQAAGYFDGSSSVSIAPNPAAVADKVEMIIYDDQEAEVGRVDLPVSAEPYQWNGEDGD GNTLPEGSYSFVIESSSNGEVILSELAEVYGRVEETQNVDGEVALILESGSAILATSV TALRDPTSSSGNS" /product="flagellar basal-body rod modification protein FlgD" /transl_table=11 /note="Flagellar hook capping protein, Flagellar hook capping protein, homology to flgD, belas" /note="Hypothetical protein" CDS 1112729..1113577 /locus_tag="Silicibacter_1067" /function="COG: Predicted choline kinase involved in LPS biosynthesis" /translation="MSGAILSGPEQKPDQDDIETALFRHLAQQGWCLSAPTPLAGGRS NHVWRAGDKVVKLYRSDAHNPLFANDPDRERAMLRALSGTGMAPRFLAHGLWQGQAWL MYTHVCGARWESDPSHVARILSIVHDQAKPRGLPFGCNGSEALAQQTRQIVSAASQGT TLLDRAPQGVVPPTSQLCLIHGDPVPGNIVAHNGTLALIDWQCPQLGDPAEDLALFLS PAMQLAYRGRVLSRQEEAEFVTAYPHPRVVARYYALKPWFHWRMAAYCAWRGETDARD LELAEI" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3464 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1113574..1114881) /locus_tag="Silicibacter_1068" /function="COG: Glycine/D-amino acid oxidases (deaminating)" /translation="MMRRIFGDYAYGAGPRSNCWWDETCPPPIWPEFQGAQSVDVAII GGGFTGLSAALHLAEAGLRVAVLEAETPGWGASGRNGGFCCLGGAKLGPRAMARLHGS RETQLYQASEEAAVHLVEQLIARHGISADTHSDGETVMAHSAKARKALMMEAKTSGAT FIDAPDLAERGFGGNFHGALTTPVGFALNPRKYLFGLARAAQAAGALLFQNSPALEVT QHGSHWHAVCPGGRLSAPQMIIATNGYSSENLPEWLAGRYMPTQSTVMVTRPITAEEQ ATQGWNTAQMAYDTRHMLHYFRLMPDGRFLFGMRGGLMSSPRSEAKIRSLLRRHFERL FPAWSHIETTHSWSGMVCLSRNLVPFVGPVPEHKGLFAGLCYHGNGVAMGSYSGALLA QLVEGRTPEMPYSKVMQRMPRFPLGRARRLLMPPAYGLLSLLD" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3465 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1114878..1115696) /locus_tag="Silicibacter_1069" /function="COG: ABC-type spermidine/putrescine transport system, permease component II" /gene="potI" /translation="MKRLSAFNVVSLTLGFAFLYIPMLILILFSFNESKLVTVWAGFS TKWYGELMQNEAMLQAAWVTVKVAVFSSTIATVLGTMAAYVMIRGGRFMGRTLFSGMI YAPLVMPEVITGLSLLLLFIGIGLDRGVLTIVLAHTTFSMCYVSVVVSSRLATFDRSL EEAALDLGCSQAQAFRLVTLPIIAPAVVSGWLLAFTLSLDDLVIASFTTGPAATTLPI KIFSAVRLGVSPEINALSTIMIAIVTVGVISASLVSKRALVKQRREEQEAVRTT" /product="putrescine ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO3466 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1115693..1116574) /locus_tag="Silicibacter_1070" /function="COG: ABC-type spermidine/putrescine transport system, permease component I" /gene="potH" /translation="MRRFFLIAVPYAWLLALFLVPFLIVLKISLSDAAIARPPYFPQF DWAEGIRAFLAELDFENFTWLLEDDLYWKAYLSSLQIALTSTLLTLIVGYPIAYGMAR APEEWRPTLMMLVILPFWTSFLIRVYAWKGILSNEGFLNQFLMWTGLVSEPLQILNTT TAVYIGIVYTYLPFMILPIYAALERMDDSLIEAAEDLGCSRLSAFWLVTIPLSKGGII AGCFLVFIPAMGEFVIPSLLGGSDTLMIGKVLWEEFFSNRDWPVASAVAVILLLILVV PIVLFQRNQQKEQEGDT" /product="putrescine ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO3467 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1116574..1117770) /locus_tag="Silicibacter_1071" /function="COG: ABC-type spermidine/putrescine transport systems, ATPase components" /gene="potG" /translation="MHAPPTSPTQDDGPVPTARMGENLAIPVFEPWTDPQAKPLIQFQ NVTKRFGDFTAIDDLTIDIYEREFFALLGPSGCGKTTMMRMLAGFETPTEGKIFLAGQ DIAPVPPNQRAVNMMFQSYALFPHLSVWENIAFGLKREGLPRNEINARVDEMLRLTRL EKFARRKPHQISGGQRQRVALARSLAKAPKLLLLDEPLGALDKKLREETQFELMDIQE KTGTTFVIVTHDQEEAMTVASRVAVMDNGKVMQVATPADIYEAPNSVYVADFIGDVNL IEGKATATGEDSYALHWREGAAPLTVKSPNKISDGQKAHLAIRPEKVTISSEKPEAAD NVVQGKVLDIAYLGNLSTYHVELPTGDVIKAQTANTRRISRRAYTWEDTVWLSWTATG GVLLGE" /product="putrescine ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3468 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1117804..1118892) /locus_tag="Silicibacter_1072" /function="COG: Spermidine/putrescine-binding periplasmic protein" /gene="potF" /translation="MKTKTATIVSAIALSAAAAASADEVRVYNWSDYIDESLLAKFEE ETGIELIYDVFDSNELLETKMLAGGSGYDVVVPTGSFLQRQIQAGVFQKIDREKLTNY GNVWDVIQERNARFDPDNAYSINYMWGTTGLGTNLGKVAEALGDDAPIDSLSLVFDPA NMEKLSECGVHFLDAPTEMMPAALTYLGLDPNTEDKAELERAADVLEAVRPYVQKFHS SEYINALANGDICVAFGWSGDILQARDRAAEADNGVEIAYNAPSEGALMWFDQMAIPV DAPNPEAAHKFLDFMLDAQNMATASNYVYYANGNKASQEFLEDDVINDPAIYPTPEAM ENTYIKAPYSQKAQRVVTRLWTRVKSGT" /product="putrescine ABC transporter, periplasmic putrescine-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3469 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1118910..1119725 /locus_tag="Silicibacter_1073" /function="COG: Transcriptional regulators" /translation="MPESSCPAMGYFDQVLPHPARHFMFSSAFCWCKLPKNEKDPSPV NVPNTPSVTPAEGGQKLPAHELVYQRLRAQILFGELAPGQAVTIQGLVEALDSGMTPV REAIRRLISDGALVFQGNRRVSVPELRAEDVDELIYARKTMECELARRAATRIPSASV DALEALDLRLDTAIANGDVAGYLGLNYEFHSMLNEYADAPILADLADRLWLRFGPSLR VVCGRFGTQSFPDRHKDILEGLRKKDADLVSLAMERDVLQGMEQVRAGLTPIN" /product="transcriptional regulator, GntR family" /transl_table=11 /note="identified by match to putative ortholog SPO3470 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1119789..1121186 /locus_tag="Silicibacter_1074" /function="COG: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase" /translation="MTTITNHLPTAELQALDAAHHMHPFTANGGLAQKGARIITRAKG VTLTDSEGHEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFFQTTHVPVIAL AAKIAELAPDNLNNVFFAGSGSEANDTNIRMVRHYWAMKGKPTKSVIISRKNAYHGSS VGSGSLGGMSAMHAQGGLPIPDIHHINQPNWWAEGGNTDPEDFGLQRAQELEKAILEL GEDRVAAFIAEPVQGAGGVIVPPASYWPEIQRICDKYEILLIADEVICGFGRTGNWFG SETMGIRPDIMTIAKGLSSGYAPIGGSIVSDEVAAVIAQDEFNHGYTYSGHPVAAAVA LENLRILEEENVLDHVRNVAAPYLKEKWEALTAHPLVGEAKIVGMMGSIALTPNKATR AAFEAEAGTVGFICRERCFANNLVMRHVGDRMIISPPLVITPEEIDTLIARATKSLDE CYTELQAQGLLKSAA" /product="aminotransferase, class III" /transl_table=11 /note="identified by match to putative ortholog SPO3471 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1121490..1122590 /locus_tag="Silicibacter_1075" /function="COG: ABC-type spermidine/putrescine transport systems, ATPase components" /translation="MADASNTDAFVEFERVQKSYDGETLVVKDLNLTMPKGEFLTMLG PSGSGKTTCLMMLAGFETATHGDIRLGGVSINNIPPHKRGIGMVFQNYALFPHMTIAE NLSFPLEVRNMGKSEREAKVKRALDMVEMGDFGGRRPAQLSGGQQQRVALARALVFEP ELVLMDEPLGALDKQLREKMQFEITHLAHQLGITTVYVTHDQTEALTMSDRVAVFNDG RIQQLAPPDQLYEEPANSFVAQFIGENNTLEGVIKEIRDGSALVQLDGGELIDAMPIN VSEVGQRTRVSIRPERVEYNKERLQEGAHTLKAEVLEFIYMGDIFRTRLRVAGNDEFV IKTRNAPDQVRLQPGQQIEIGWLPEDCRALDA" /product="polyamine ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3472 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1122695..1123801 /locus_tag="Silicibacter_1076" /function="COG: Spermidine/putrescine-binding periplasmic protein" /translation="MKLRTLSALAATTALCAPMAMATEMANEMTLVSWGGAYQESQLK AYVEPYLEMNPDVTVVWDESSAEATAKMRAMAEAGNITWDLVDVVASDAMRLCDEGLA LELDHDEVLAAAPDGTSASDDFGDLLVSDCFVPQIVYSTTFGYRTDLVGDTPPSSVCD VFDLEAYPGKRALQKRPIDNMEWALYCDGVAKDEIYDTLSTDEGVAQALAKLDTIKDS VVWWTAGAETPQLLADGEVVMGSTYNGRLFSAIAEQDQPIGMLWDMQSFDLDGWVVPA DLPADREARVLDFLKFATDTQRLADQAKYISYGPARASSAPLVGKHEELGIDMAPHMP TDPNNATNVHIYDYEWWADNRDDLDAKFQAWLAQ" /product="polyamine ABC trasnporter, periplasmic polyamine-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3473 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1123912..1125537 /locus_tag="Silicibacter_1077" /function="COG: ABC-type spermidine/putrescine transport system, permease component I" /translation="MSDTTDTGPVLAADGTPLKRSLARALRMQKMRALALIAPLLLFV LLTFILPIGDMLFRSVENSIVSETLPRTTAAAQSYDADSGEAPPEYAFDALAYDLVVA AEKKIHTRVGSRLNYENAGISSLFRKAGRRVDDIGEVYLDQFVDLDPAWEDPQALVAL FADPSWAASAGGENEARFEYSSVAGEALPGATDAYAAWARTIQEEDQDSPTEEEPWAP VYMALYKDLAKNPDAASAFEGETAARLAAAAAAIQSPDWETMSTRDAFIKIDDDWADP EVWRTIKTYSSKYTNGYFLNAADFQKGEDGPELRPELERIYGTLFLRTMIMSLAITVS CIVLGYPVAWILANLPSRTANVLMILVLLPFWTSLLVRTSAWKVMLQQQGVINDVLVW LGLVADDARLVMINNQFGTIVAMTHILLPFMILPMYSVMQTINPSYLRAAKSLGATNW TAFWRVYFPQSVPGIGAGSILVFILAIGYYITPELVGGTKGVFISNRIAFHISQSLNW GLAAALGTILLVVVLVLYWAYDKIVGIDNVKLG" /product="polyamine ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO3474 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1125545..1126720 /locus_tag="Silicibacter_1078" /function="COG: ABC-type spermidine/putrescine transport system, permease component II" /translation="MALTPVQNQTPAFTAAVSAGAGAFFGLFVGTAQGSGLLGLVIGA VLLGALGFVFASMTAQEKPIRWAVLVAFAIAGFVLGGLPALVIGALFGWFAGWFIFWL ATSRYRATLVPYLTPGQVLWHYTFRVICGAIFVFLITPILVVMPLSFNAEDFFTFTPE MLRFDPEGYSLKHYRDFFTNADWQQALWNSLSIAPMATLLSVGFGTLAAIGLSQPHVP FRRAIMAILISPMIVPLIISAAGMYFFYSRIGLQGTYFGVVLAHAALGIPFVIITVTA TLVGFDRSLTRAAANMGAGPVTTFFRVQMPLILPGVISGGLFAFITSFDEVVVVLFVG SAGQKTLPWQMFTGLREQISPTILAVATILVVISICLLTTVEMLRRRSERLRGMSPS" /product="polyamine ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO3475 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1126785..1128152) /locus_tag="Silicibacter_1079" /function="COG: Membrane-bound lytic murein transglycosylase B" /translation="MRSWIKTALWLGVVLPAGAALAASETEAIKDRLRPEERPQQAYD TAGSLALASLTTIRPMARKSVAPAAQDALAPAREVDGDANAGFQRWITAFKIRAQTQG IGAATLRAAFNGVTYDASVIKRDRNQSEFTKTIWDYLDSAASESRVRNGTKALDAHRN TLERIEKHFGVDKEIVVAVWGLESSYGSFRGDMDIIRSLATLAYDGRRGDFFEEQLIA ALKIIEAGDVNPRTMTGSWAGAMGHTQFIPTSYLDYAVDFTGDGKRDIWSDTPTDALA STAAYLKAFGWVTGQPWGIEVVLPRGFDFTLANRKIQKSPREWADLGVRATDGRPIKD HGVASILLPAGGTGAAFMIFKNFSVLERYNTADAYVIGVGHLSDRLKGGEKIKGSWPR GDRALTFTERKELQERLTRAGFSTEGIDGRIGPKTIAAVRAYQSAKGLMPDGYASLSL LEKLR" /product="peptidoglycan binding domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3488 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1128260..1129018) /locus_tag="Silicibacter_1080" /function="COG: Predicted transcriptional regulator" /translation="MMRPCYKALLTVFVISGLHTRQMTKTERLFRLMQTLRQLPPPVT AEQLAQDLGVSARTIHRDIDALRALGAVIDGAAGFGFTLIEDATLPPLGFGATELEAL VLGLCEVQQKGDPDLAEAARTALRKLRARLPQSQAKRLQHAVLSAHSFAPPLTPTVDA AELRQATWDEREVGFDYVDVKGAVTQRHVKPLGLVYFDKSSVLVAWCRLRQDFRVFRL DRMTSLEVTQISFRPHRVRLYREALDHLRNQSLG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3487 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1129039..1129752 /locus_tag="Silicibacter_1081" /function="COG: Glutathione S-transferase" /translation="MLTLMTHGGGDGFYSYSMFCTKAALLLQMSGATWQRQDVFDPAE LDAMPHQKLPVVRDETDALIPDSEGIRRFLEAKGANFDQGLSAAQKGQSRALIRMIDE SLWTQLMCARWLEDEGWAGMLQSVFAGVPEEPLNLFREKVVEGLHFTGHSRFDRAERL QRLEQDLCALEDFLGDQHFLFGDHMTAADCSAAPMLEALSRAPAAPQVVEVTRRHGKL LAYVTRVLDRGALELPQAA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3486 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1129901..1132186) /locus_tag="Silicibacter_1082" /function="COG: Exoribonuclease R" /gene="rnr" /transl_table=11 /note="identified by match to putative ortholog SPO3330 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ribonuclease R" /translation="MARIPTKAEILEWISAHPTQTSKRDIAKAFGIKGAERIDLKRVL KELEAEGHLEKRKRSYTDPDRLPPVSVLLVKAPDENGDLFAQPLEWHGEGIEPIVMVI PRASDPALGEGDRILARLTVVQEEDHNYEARLIRRIGTNPKRILGIFRQGSEGGRIVP IDKASSNEWQVPEANVHGAKDGELVEAELAGPKARMGLPKARIVERLGDPSAPKAVSL IAIHQHGIPDHFPDAVIAEADSAKPMGLKGREDLRDLPLITIDPADARDHDDACFAHA DEDPMNPGGHVIWVAIADVAAYVTPGSALDREARKRGNSSYFPDRVVPMLPDRLSGDL CSLHEGVPRPCLAVRLQIDAEGHKIGHRFVRGLMKSQASLHYGEVQEAMDGKITERTE PFLEDVIKPLYAAYEALKAARAARQPLDLDLPERKIVLDDKGKVASVNFRDRLDAHRL IEEFMVLANVAAAETLIKKRQPLLFRVHEEPSQDKLDALRDTAQAAGLNLAKGQVLQT RHLNALLNAAAGTDDAELINISTLRSMQQAYYYPENFGHFGLALRNYAHFTSPIRRYA DLIVHRALITAHGWGKDGLSADEIERLEDTATHISATERRSMLAERDTTDRYLASYLA ERVGNEFSGRISGIARFGAFVKLDETGADGLVPVRSIGQEYFHFDAQAGTLMGSDTGL LITIGQRVTVRLTEAAPVTGGLELELLALEGADLPKGRGGSRKGGRRRSPAGRTMTRS KAAKSKTKADKIKRKVTRKRK" /EC_number="3.1.-.-" CDS complement(1132302..1132724) /locus_tag="Silicibacter_1083" /function="COG: Predicted acyltransferase" /translation="MSPSIVVTRDLDTCLTLRFEVFVDEQGVPVEEERDALDDTATHL LALQDGVPVGTARVVFQDDIAKIGRVCVVKSARGTGLGAKLIEACVAAAQEREGITKA KLGAQTHAIGFYEKLGFEAFGPVYLDAGIDHRDMMKPL" /product="Hypothetical UPF0039 protein yybD." /transl_table=11 /EC_number="2.3.1.-" /note=", GCN5-related N-acetyltransferase, Acetyltransferase (GNAT) family" /note="Conserved hypothetical protein" CDS complement(1132721..1133866) /locus_tag="Silicibacter_1084" /function="COG: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases" /gene="dapE" /transl_table=11 /note="identified by match to putative ortholog SPO3332 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="succinyl-diaminopimelate desuccinylase" /translation="MTTTDPVQLTADLVRCPSVTPTEGGALVLLERLLTDAGFSCTRV DRGEVCNLFARWGDKAHARTFGFNGHTDVVPIGDEAAWTHDPFGAEIVEGVMYGRGTT DMKSGVAAFAAAAIDFVQDTPPDGAVVLTITGDEEGDAVDGTTALLDYMDAAGEKMSV CLVGEPTCPNHMGEMIKIGRRGSMTAWFTVTGVQGHSAYPHRANNPMNGLARLMDRLG SHQLDEGSEHFDASTLAIVTIDTGNPATNVIPAQGRAAVNIRFNDLHSGASLTDWLQG EADKVAKEFGLEVDMKVQISGESFITPPGDLSDLVSRAVQTETNQAPELSTTGGTSDA RFVKSHCPVVEFGLVGKTMHQVDENVDVAHIHQLKSIYSRILKDYFS" /EC_number="3.5.1.18" CDS 1134125..1135432 /locus_tag="Silicibacter_1085" /translation="MSPPGSSFACIRHLRRATSRTGNIGTETEGRPGHQKADERAARG KTLTGGGVRHGRQHRAPDGCDRAGAQMSWLGLWHKEAQYFDAAGLTPSVERSCLLLRE ADALLPRGALVLEVSLPELRKPEPLVLFERGGDWPLRFQLSAVPGGGINLVLEQYGAV FHQTLNPTKRGRADQVRLTYNWDAPAFEGQLALEWLDGDRAEIADIHAPRPWRLADLE ALIEGGPHCFIASGVEYIALSDQPEPVGPMPGLSPFTPVETETGARPIKDLRRGDLLR CASGDLVPVLHKIEREVPAVGSFCPVQLRAPYFGLTQDITVAPFQRMVLTGSEVEYLF GCEAVLAPAEMLAATRTARRVLPAGPITTYAQVILPGHEVPVVAGLGVESLFLGRIRR DRSALGASLFAGLDRNSLPEHAQPRYPVVRAFDAAILAEHRTA" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3334 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1135503..1136567 /locus_tag="Silicibacter_1086" /function="COG: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain" /translation="MTLRSIWFCLVTVLMTLPALPLRAQELVVNTVTRPPFSMPVGEH ETGFTMDLIREVSQRLGWDIQINRVDNFAQMLEEVERGEADMAAANISITAGREAVMD FSQPIFESGLQIMLHQDDVSEPSLISALMSWDLFAAIAIAFVLLLVGGMLMWVFERRA QPYFDRPLKDAWFPSFWWALNLVVNGGFEERVPRSALGRVFGVLLVLSSLFVVSVFVA KITAAMTVEAINGSVNSVNDLYGKRVGTIQGSTAAGFLDRREIDYVAFPGLDKMLEDF EDGDTRIVVFDAPVLNHYVKTDGAGIGHVMGRKFLTEYYGIIFPQGSDMVEPFNRALL KMQEDGAYETLYRKWFGQSF" /product="glutamine ABC transporter, periplasmic glutamine-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3335 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1136619..1136984) /locus_tag="Silicibacter_1087" /translation="MTQKKPSRQQVYTLIVQIGRKEGDGLPKDATGAALMVYASGVDE AEAVRETVAILKQADTAPLDVTGYGTIAEREAEGHEIPQEERDLMQRALDENAVIVAQ MTPFFGDELSAVDENSAPH" /product="hypothetical protein" /transl_table=11 /note="Hypothetical protein" CDS 1137142..1138722 /locus_tag="Silicibacter_1088" /function="COG: RTX toxins and related Ca2+-binding proteins" /translation="MPTAQELPIDTTASAEDMAEAIFGNGIEIQSATYTGANGASGIY SGGDSITPGVTPSDTGVILSTGNATDFTNSSGSTDTNTSAGTSTNHGTAGDTDLDAIA GGTTYDAAVFEAEFVPEGSTLTMQFVFSSEEYLEYVNSGFNDAVSVWVNGVEAELVVG DGNIAIDNINDTSNSDLYVDNPADSDLYNTEMDGFTVTLKLTAPVNPGETNHIKIAIA DTGDAAYDSNLLIAGDSVQTALVAENDQVLVWEGSSTTVDVLANDAQGSGAQLTITHI NNQPVTAGSSVTLANGEIITLNEDGTLEITGQPDVDTDETSVFTYTVADDEGNTDVAF VDLTTTPCFVEGTLIDTTEGPCPVEALEIGMTVVTRDHGAQPLRWIGRSIRTASGNDA PVRIAANTLGQHQEIELSPSHRVLLCSAAAEMLFGQEEVLIPAHHLVNDSTIRRRSDG RRVTYFHLLFDQHEIIRGNGLESESYHPGAASLGGLDAETRAEFFDLMGDSWQSYQNM KRPTLKSYETRALLGAVQ" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3333 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1138716..1139417) /locus_tag="Silicibacter_1089" /function="COG: Transcriptional regulators" /translation="MQQQKKTSFQDVRDEVMRRIEARVWDQGALLPTEADLAEEFGCA RATVNRALRELADRGIIDRKRKSGTRVATLPVKQAKLEIATTRRLVEERNATYRYALV SRSLQPAPGWLSSQMGLAINAQVLHMEVMHYADGQPFHFEDRWINIAAVPASETADFS ETPPGEWLLAAVPFSNAEVSFFASAADAKIADYMACPPGTALFQMERSTWFQDQPVTF ARMSFQPGYRMRSRY" /product="transcriptional regulator, GntR family" /transl_table=11 /note="identified by match to putative ortholog SPO1369 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1139497..1140027 /locus_tag="Silicibacter_1090" /translation="MRFDAAEIRPAPWKNGGGTTRELAVGQDVSGQIWRLSLAEIARE GPFSSFAGQWRIHTIISGQGLRLMGTEETLEALPLAPLEFDGGIALDAQFIEGPCRAV NLIYDPRHLAATAEVRNGSLRAQRGDLVFVIRGALTLGGKNFVAGQGAAVEAPARAEV EGTVLHFEIRVPPKET" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2147 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1140002..1141366) /locus_tag="Silicibacter_1091" /function="COG: Cytosine deaminase and related metal-dependent hydrolases" /gene="hutF" /transl_table=11 /note="identified by match to putative ortholog SPO2194 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" /product="formiminoglutamate deiminase" /translation="MQTIFAATACLPEGWAKDVRLTIKDGQISRIETGSAPVPGDTRV DVLLPALANLHSHSFQRAMAGRTEFRGAGQDSFWTWRELMYRFLDHLTPDQYEAIAAL TFMEMMEAGYASVGEFHYVHHQPGGTAYQSLSELSQRVMAGAQQTGIGLTHLPVLYTY GGAQQQPLTGGQMRFGNDVERFSRLVTEARDAAQELGRDTRVGIAPHSLRATSPEDLA AVLPLAADSPIHIHIAEQPREVAEIKVWLGARPVEWLLGNAPVDNQWCLIHATHMTET ETRHMAHSGAVAGLCPITEANLGDGPFNGAHYLREGGRFGVGSDSNVRISLVEELRTL EYSQRLRDLARNVLVPAEGSVGETLYLGAARGGAQALGRDAGRLEIGALADLVAIDCA RPALFGLPEHQILDGLCFAADDHSVTDVWAAGRHMVQTGRHIARDSILASYRKAITSL LAEL" /EC_number="3.5.3.13" CDS 1141442..1142659 /locus_tag="Silicibacter_1092" /function="COG: Imidazolonepropionase and related amidohydrolases" /gene="hutI" /transl_table=11 /note="identified by match to putative ortholog SPO2191 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="imidazolonepropionase" /translation="MRDTYVLSGARLATMEAEGSYGLVEDGAIAIQGDEILWCGARGA LPDTYAACPSTDLNGRLVTPAFIDCHTHIVFGGDRAGEFEMRLEGATYEEVAKAGGGI VSTVTATRAASLDALVTGALPRLDALIAEGVSTVEVKSGYGLDRETELNMLRAARRLA EHRDVTVKTTFLGAHAVPAEYAGRADAYLDEVCLPTLRAAHAEGLVDAVDGFCEGIAF SAAQIAKVFDVAAELGLPVKLHAEQLSHQGGTKLAAERGALSVDHVEYATEADARAMA ASGSVAVLLPGAFYTIRETQVPPVAEFRMHGVPMALATDCNPGSSPLTSLLLTLNMGC TLFRLTPEEALAGVTRNAARALGMQDRGRIAPGLRADLAVWDVSRPAELAYRIGFNPL YARVMGGKMEVRT" /EC_number="3.5.2.7" CDS 1142656..1144179 /locus_tag="Silicibacter_1093" /function="COG: Histidine ammonia-lyase" /gene="hutH" /transl_table=11 /note="identified by match to putative ortholog SPO2192 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="histidine ammonia-lyase" /translation="MIEMIPGAVTLDTLERIWRHGTPARLADSARAGVEAAAAMVAEA AAGEVPVYGINTGFGKLASTKIAPEDTATLQRNLILSHSCGVGEPLAEDKTRLMMVLK LLSLGRGASGVRWAVIEQIQEMLARGVTPVVPSQGSVGASGDLAPLAHMTAAMIGEGE ATIDGVRLPGAEALRRAGLEPIVLGPKEGLGLINGTQFSTACALTGLFEALEMARASM AIASLTTDAIMGSTAPLVADIHSLRGHAGQMEVAATMRDIMAGSEIRESHREGDTRVQ DPYCIRCQPQVVGAALDVLRMAARTLEIEANAVTDNPLVLVEAGQIVSGGNFHAEYVG FAADQIALAVAEIGAIAQRRVALMVDPTLSHDLPPFLTPNPGLNSGFMIAEVTTAALM SENKHLANPCVTDSTPTSANQEDHVSMAAHGALRLAKMNANLSVILGVEMLCAAQGVE ARAPLKTSSRLQNLLDMLRGEIPSLGEDRYLAPEIETASAMVRAGRVAQAAGVEVST" /EC_number="4.3.1.3" CDS 1144176..1144952 /locus_tag="Silicibacter_1094" /function="COG: N-formylglutamate amidohydrolase" /gene="hutG" /transl_table=11 /note="identified by match to putative ortholog SPOA0448 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" /product="N-formylglutamate amidohydrolase" /translation="MIEVTQGSSPLVLGLPHTGTDVPAEVAQHLNDRGQALADTDWHI HDLYAGLVEGVTTVRTPIHRYVIDVNRDPEGVSLYPGQNTTTLVPLTDFDGHPIWQQE PDAAETAHRLETYHVPYHAALEAEMKRVAGLHGFAILYDCHSIRGDIPFLFEGRLPDF NVGTNLGATCAPSIEDMVFQRCQRAEGYTSVLNGRFKGGWTTRHYGRPDQGWHAIQME LAQATYCDEQPPWRYDPVRADRLRGHLTQILTDLTEWRPA" /EC_number="3.5.1.68" CDS 1144949..1146637 /locus_tag="Silicibacter_1095" /function="COG: Urocanate hydratase" /gene="hutU" /transl_table=11 /note="identified by match to putative ortholog SPO2193 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="urocanate hydratase" /translation="MSDPRKNTRDIFPATGTEITAKSWLTEAPMRMLMNNLHPDVAEN PHELVVYGGIGRAARTWQDFDLIVETLKTLEEDQTLMVQSGKPVGVFQTHKDAPRVLI ANSNLVPHWANWDHFNELDKKGLMMYGQMTAGSWIYIGTQGIVQGTYETFAEAGRQHY GGDLTGKWILTGGLGGMGGAQPLAAVFAGACCLAVECNPDSIDFRLRTKYLDEKAETL DEALEMIERWTKAGEAKSVGLLGNAADVFAELVERAKAGGMRPDIVTDQTSAHDPVNG YLPQGWTMAEWREKRETDKKAVEKASRASMKAHVKAMVDFHEMGIPTVDYGNNIRQVA LEEGLETAFSFPGFVPAYIRPLFCKGIGPFRWCALSGDPEDIRKTDAKMKELFPENES LHRWLDMAQDRIAFQGLPARICWIGLGDRHKAGLAFNEMVRNGELSAPVVIGRDHLDS GSVASPNRETEAMMDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGVV ICCDGTEDADRRIGRVLWNDPATGVMRHADAGYEIAKDCAKEHGLNLPGILRSE" /EC_number="4.2.1.49" CDS complement(1146693..1147082) /locus_tag="Silicibacter_1096" /function="COG: Lactoylglutathione lyase and related lyases" /translation="MRESWKPTDYPSLCPYLICHDPEGTISFLQTVFEANLLQRLDQE DGSLMHAEVRIDDSIVMIGGLPGADDNDAHVHLYVPDVQEAFDRAIAAGGKIVQEPLR KRNGDGVFGGVKGPSGTTWWLATQTDL" /product="Hypothetical protein Rv0887c/MT0910." /transl_table=11 /note=", Glyoxalase/bleomycin resistance protein/dioxygenase" /note="Conserved hypothetical protein" CDS complement(1147255..1148145) /locus_tag="Silicibacter_1097" /function="COG: Tetrahydrodipicolinate N-succinyltransferase" /gene="dapD" /transl_table=11 /note="identified by match to putative ortholog SPO3337 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase" /translation="MTLGAFAAISARIQHKPEPEHMSNAQLETAIEAAWEARDTITPA TKGETRDAIEATLAALDSGKLRVAEKQDSGDWHVNQWAKKAVLLGFRLKDMEEQSGGP QGSGWWDKVDSKFKGWEAADWKTAGFRAVPNCVVRKSAYIAPGVVLMPSFVNLGAYVD EGTMVDTWATVGSCAQIGKGVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEG VIVREGSVLGMGVFIGQSTKIVDRETGEVMYGEVPPYSVVVAGSMPSKNGINLYCAVI VKRVDEKTRSKTGINELLRD" /EC_number="2.3.1.117" CDS complement(1148203..1148832) /locus_tag="Silicibacter_1098" /function="COG: Transcriptional regulators" /translation="MGGFAPYRTFMSETAVDKIFRALMERIVTGDLPAGEKLRQDHIA RDYDVSHVPVREAFLRLEAKGLAKSIPHKGMRVTALEPTEIREVIEMRVALEVLALTH ALPRHDADTLAQVEAARQACDAAQDMVLWDRCNRQFHTALLQPCEMPRLLSAIEDLHI TAARHLFVHWRDRWTSRIDSDHDALLEAVTAQDLPRACDILRRHLRRVS" /product="transcriptional regulator, GntR family" /transl_table=11 /note="identified by match to putative ortholog SPO3340 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1148851..1149804) /locus_tag="Silicibacter_1099" /function="COG: Threonine dehydratase" /translation="MDWTSQISGARGRIAQHVVKTPTVSVQSFGLAFPVELKLEHLQH AGSFKARGAFNTLLSTPVPEAGLVAASGGNHGAAVAFAARALGHNAKIYVPEIAGQTK IDLIRSTGAELEVVPGAYANALEAAQDWELQTGAMQIHAYDAPATVAGQGTLFAEWEE QGLEADTILIAVGGGGLIGGALGWFEGRRKVVAVEPATSCALKTALMNGKPTNVDVGG IAANALGARRIGDICFDLAHNARTPSVIVPDAAIEAAQHALWRDHRLLVEPAGATALA ALMCGAYLPARDEKVSVLLCGGNIDPEPLTDPATRLDVSFN" /product="pyridoxal-phosphate dependent enzyme family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3341 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1149961..1150809 /locus_tag="Silicibacter_1100" /function="COG: Predicted Rossmann fold nucleotide-binding protein" /translation="MSDDRKSRFPDARADRYRAEHVPVTPQTQSPVYQLAFADEGFLC REELRPVRLQLELLKPQLMLDEKGVESTVVMFGGARIPAPRDKDKARTQTLADLSHFY DEARTFAQKMTEKSKASGGRRHVVVTGGGPGVMEAGNRGAVDAGGESIGLNIVLPHEQ APNEYVTPELCFNFHYFAIRKMHFLMRAEAICVFPGGFGTLDELFEALTLIQTGRMEP VPFLLFGRSFWEKIINWEALADAGTISDQDLDLFKFVESADEAIAAIEAWNPVPARQN LPGRDR" /product="decarboxylase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3342 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1151005..1151208) /locus_tag="Silicibacter_1101" /translation="MIGQQVGKMDDGILSLVREERRKALSPREWQFRLRGYGYAIRNE GDTQVLTRLPRGEAVGVLPADMS" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3343 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1151376..1152569) /locus_tag="Silicibacter_1102" /function="COG: Predicted Fe-S-cluster redox enzyme" /translation="MTASAPITQDVLTLPRKEPEGGKINLVGLTRDRMRAVLIENGTP EKQAKMRVGQIWQWIYQWGVRDFAEMTNLAKAYRAQLEETFEIRIPEVVSKQVSTDGT RKYLVRINGGHEVEVVYIPEDDRGTLCISSQVGCTLTCSFCHTGTQKLVRNLTPAEII GQVMMARDDLEEWPTPGAPKDETRLLSNIVLMGMGEPLYNFDNVRDAMKIAMDPEGIS LSRRRITLSTSGVVPEIARTAEEIGCLLAISFHATTNEVRDVLVPINRRWNIDELLQA LADYPKVSNSERITFEYVMLDGVNDSDEDAHRLLDHIKRHNIPAKINLIPFNEWPGAP YKRSSNNRIRAFANIIYQAGYASPIRKTRGDDIMAACGQLKSATERARKSRKQIEAEA GVNNS" /product="radical SAM enzyme, Cfr family" /transl_table=11 /note="identified by match to putative ortholog SPO3346 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1153556..1154563 /locus_tag="Silicibacter_1104" /function="COG: L-asparaginase II" /translation="MTTPIAAAPFTELWRGDLLESQHHGHAVICNGKGEVIRSWGNPE QIIYPRSSCKMIQALPLLTSGAAARYGLSTEQLALACASHNGAHIHIDRVGHWLDQLN LGEGDLRCGAQKPKDKDVLYDLIKRDDSPCQIHNNCSGKHAGFLTLSQHLGAGPEYVE IDHPVQQACREAFEETTKESSPTYGIDGCSAPNFACSITGLARAMGWFASAHTRSGRA DDAAVQLRDAMARHPELVAGEGRACTALMRDMGGKVSVKTGAEGVFVAILPEQQLGIA LKIVDGTTRAAENAITTLLVSLGALDRNSPSAKAYMTAPITNWNGIHCGEMRPASGLV F" /product="L-asparaginase, thermolabile family" /transl_table=11 /note="identified by match to putative ortholog SPO3349 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1152793..1153557) /locus_tag="Silicibacter_1103" /translation="MGLAHQLEGFSCQQTYKTPAFQGKDGKNLPNLAIAHGPCSVNML VSSIMRCGYRRCAKHRTRGPNTFEDKTVLEAGHMALKLRRLAGALLLAGMATSASAQQ ATTDNRVGAHVDWSVFEETSPRECIGVSAPKETVNTRDGRVVAVRRSEIRLFVFYRPD SGNKGQVTFTGGYPFAPGSTVNMKIGDSEFELFTEGEWAWPATPTDDTKIITAMKRGA DAVLTARSSRGTQTKDTFSLLGFTAAIEDAEKRCAG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3348 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1154577..1154897) /locus_tag="Silicibacter_1105" /translation="MPQFIFAYHGGKAAETPEEEEKEMAAWMAWFQEMGDAVAIPGNP VGKSKTVSAAAITDDGGSNPISGYTVVTADTIEEACEMAKGCPSVTDGTGTIEVAEII EMVM" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3350 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1154984..1155742) /locus_tag="Silicibacter_1106" /function="COG: Predicted permeases" /translation="MFEVTFEVLLLLMAAGFAAGFIDAVAGGGGLITVPVLLIAGANP VTALATNKIQGLFGAATAAITYARGGHVNLRTQWKSAVIAFFASIAGALLVSVLPVEL IRYALPVLLIGIAVFFATKKGLNDEDRAQRLTPAVFAATMVPLCAAYDGLLGPGAGSF YMLAFVGLAGYGVLKATAHTKLLNFASNAGALAAFAVVATPWWLTGLAMGFAQIAGAR VGAGLAQKQGAKVIKPLLVLTTVSLAMKLIWDML" /product="Hypothetical 27.4 kDa protein in cobO 3'region" /transl_table=11 /note=", Hypothetical 27.4 kDa protein in cobO 3'region (ORF9)., Protein of unknown function DUF81, Domain of unknown function DUF81" /note="High confidence in function and specificity" CDS complement(1155751..1156626) /locus_tag="Silicibacter_1107" /function="COG: Phosphoserine phosphatase" /gene="serB-2" /transl_table=11 /note="identified by match to putative ortholog SPO3353 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="phosphoserine phosphatase" /translation="MYVATLLVNPATPTLEPALVESLRNAWGGGEANWLNPGIAAEFT LNALPDNQWDVWSDLQGMGVDLVLQPAEGRRKKMLLADMDSTMIQQECIDELADEAGV GARVKDITARAMNGELDFEGALTERVGLLKGLPEEVIAQVLDTRITLMPGGAALLATM KAHGAYAALVSGGFTAFTARVAGELGFDENRANTLIVEDGKLTGDVARPILGREAKVE ALEEITARLGISEAEVIAVGDGANDLGMLTRAGAGVALHAKPSVAAECDIRINHGDLS ALLYVQGYSLDDFKG" /EC_number="3.1.3.3" CDS 1156863..1158008 /locus_tag="Silicibacter_1108" /function="COG: Phosphoserine aminotransferase" /translation="MAIAQPASRPANPRFSSGPCAKPPTYDLSKLAGAPLGRSHRAAV GKEKLLAAIEGTREVLGIPADYKIGIVPASDTGAVEMAMWNLLGARKVEMLAWESFGA GWVTDVVKQLKIDAEVKTAEYGDIVDLQTVDTNNDVVFTWNGTTSGVRVPNGDWIKDD REGLIICDATSAAFAQELPWKKLDVTTFSWQKVLGGEAAHGVIVLSPRAVERLESYTP AWPLPKIFRLTKGGKLIDGIFTGATINTPSMLAVEDYLFALDWARSVGGVEGLIGRAN ANANAIHAFAYANDWIENLANDPATRSNTSVCLKFTDKRIKDGASFAKSVAKRLEAEG IAYDIGAYRDAPAGLRIWCGGTVETADIEAMLPWLAWAFEAEIAAQG" /product="phosphoserine aminotransferase" /transl_table=11 /EC_number="2.6.1.52" /note="identified by match to putative ortholog SPO3354 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1158102..1159697 /locus_tag="Silicibacter_1109" /function="COG: Phosphoglycerate dehydrogenase and related dehydrogenases" /gene="serA" /transl_table=11 /note="identified by match to putative ortholog SPO3355 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="D-3-phosphoglycerate dehydrogenase" /translation="MAPKVLISDKLSDAAVQIFRDRGIDVDFLPDVGKDKEKLAEIIG QYDGLAIRSATKVTPTILENATNLKVIGRAGIGTDNIDKEAASKKGVIVMNTPFGNMI TTAEHAIAMMFAVARQVPEASASTHAGKWEKSKFMGVELTGKTLGVIGAGNIGGIVCD RARGLKMKVVAYDPFLSEEKAKKMQVEKVELDELLARADFITLHVPLTEQTKNILSRE NISKTKKGVRIINCARGGLVDEEALAEALTSGHVAGAAFDVFSVEPAKENPLFNLPNV VCTPHLGAATTEAQENVALQVADQMANYLLTGAVENALNMPSVTAEEAKIMGPWIKLA DHLGAFAGQMTDEPITAINVLYDGVAADMNLDALNCSVVAGIMKKVNPDVNMVSAPVV AKERGIQISTTNQDKSGSFDGYIKVTVVTAKRERSVAGTVFSDGKPRFIQIKGINIDA EVGAHMLYTTNQDVPGIIGTLGQTLGDMDVNIANFTLGRNEVGGEAIALLYVDAEVPA DARAKLAETGYFTQIKPLAFDVA" /EC_number="1.1.1.95" CDS 1159876..1160610 /locus_tag="Silicibacter_1110" /function="COG: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases" /translation="MTKPIYAIGDIHGQTEQLERALELIERDGGAEAEIVFVGDYVDR GPDSRGVIDRLMQGQADGRNWTCLKGNHDRMFSWFLEEFPREDPHLPVALYYLQERIG GAETLASYGISCAPEDRTSVVHEAARAAVPQQHLSWIDSLPLFHQTGAQFFVHAGIRP GVPLMDQAEQDMLWIRQGFLEHTEAHPHLIVHGHTAEKHPVHYGNRVDIDCGAGYGRT LVPVVFEGDRAWCLTPGGRQHLAPGS" /product="serine/threonine protein phosphatase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3358 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1160817..1161863) /locus_tag="Silicibacter_1111" /function="COG: Threonine dehydrogenase and related Zn-dependent dehydrogenases" /gene="tdh" /transl_table=11 /note="identified by match to putative ortholog SPO3359 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="L-threonine 3-dehydrogenase" /translation="MRPNTMKALEKSKPQEGLWMVQAPVPEIGPDEVLIKINKTGICG TDIHIWNWDDWAAHTVPVPMITGHEFAGEIVELGRNVTGLTVGQRCSGEGHLIGTESR QSRSGKFHLDPGTRGIGVNEQGAFAQYLRLPAFNVVPLPDDIPDDIGAILDPLGNAVH TALSFDLLGEDVLITGAGPIGIMAAAVARHAGARHVVITDVNADRLALASEVTRVRTV NVAVEDLNDVMHELGLREGFDVGLEMSGNQQALDQMVEALVMGGKIALLGIPPGKSPV DWSRIVFKAITIKGVYGREMFETWYKMIAMLQNGLDVSGVITHRFAVDEFEQGFAAMK SGQSGKVVLDWTGG" /EC_number="1.1.1.103" CDS complement(1161865..1163049) /locus_tag="Silicibacter_1112" /function="COG: 7-keto-8-aminopelargonate synthetase and related enzymes" /gene="kbl" /transl_table=11 /note="identified by match to putative ortholog SPO3360 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="2-amino-3-ketobutyrate coenzyme A ligase" /translation="MSNAFLSHISETLTQIEADGLYKRERMITSPQGGEIRVGDREVI NLCANNYLGLADHPDLIAAAKSVMDEKGYGMASVRFICGTQDLHRTLEQKIANFLGKD DSILFAACFDANGGLFEPLLGPEDAIISDSLNHASIIDGIRLCKAQRYRYANNDMEDL EAKLKDARAKGVRHIMIATDGVFSMDGYLANLPAIREIADRHDAMVMVDDCHATGFMG PKGAGTPDHFGVDVDILTGTLGKALGGAIGGYIAGPQPVIDLLRQRARPYLFSNSLPP AVVAAGLEAIRLVEEGESLRRQLFENATIWREGLTRLGFDLLPGEHPIIPVMLGDAKL AQEMANKLFEEGVYVSGFFFPVVPKGQARIRTQMNAALTQDELNRALNAFERAGKACG VI" /EC_number="2.3.1.29" CDS 1163889..1165064 /locus_tag="Silicibacter_1114" /function="COG: Acetyl-CoA acetyltransferase" /gene="bktB" /translation="MTDIVILDGARTAIGTFGGALAQTAPIDLGATVAKAAMERSGVD PAQIGTVVYGHVINTEPRDMYLSRVAAMQAGIPESTPAMNVNRLCGSGAQAIVSGIQA LMLGDAEYALTGGAESMSRSPFITPSTRWGQKMGDVKSLDMMLGALNCPFGTGHMGVT AENVADEHEITRAQMDEFALVSQTRAAAAIEAGYFQSQIVPVDVKVKRDMVPFEVDEH PKGTSMEALSGLRPVFKKDGRVTAGNASGINDGAAALVLATAEAAEKSGLKPKARILG YAHAGVRPEVMGVGPIPAVEQLLKRIDMTVGDFDLIESNEAFAAQALAVNKALGLDSA KVNPNGGAIALGHPVGATGAIITVKALYELERTGGRRAIITMCIGGGQGIALAIERI" /product="beta-ketothiolase" /transl_table=11 /note="identified by match to putative ortholog SPO0142 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1163214..1164053) /locus_tag="Silicibacter_1113" /function="COG: Predicted transcriptional regulators" /translation="MTIDNSADLSRIDTRPLHRSFGDRRSKIYRRRLGQRATKGSDRS AGAIQNHNICHLSLLVSVRDSMHLQHEPVAQNVPSLTGLEGRATTSAMTDTTDDILTL LPARLKEARRAQGLSLEAVANLSGVSRSMVSQIERGESSPTIATLWNLTRALQVDFAG LLEAGEAADRIDVLRARDVPVIDSKAAHCTIAILSPPEDVGGHEVYDISFASGGALIS QPHAPGTREQLTVLEGRVVLTSGTAEDRLEPGDTARYAADVAHAIAAPDGTARVFLIV KNG" /product="DNA binding protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0141 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1165174..1166700) /locus_tag="Silicibacter_1115" /function="COG: Predicted unusual protein kinase" /gene="ubiB" /transl_table=11 /note="identified by match to putative ortholog SPO0144 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="2-polyprenylphenol 6-hydroxylase" /translation="MRGPHNIIRLIRTGATLVRTGAMNVVLDAFDAPAPLRMVAYTLG WPFQWLGYKGDPEMPPATRAITALGPAYIKFGQVLSTRPDVVGDDMARQLRVLQDKLP PFPREVAMAEVAKELGRPVDEIFSEFSEPIAAASIAQVHRARLKETGQDVAVKVLRPG IERAFHKDVDAFYFAARIAELFAPGAKRLRPMDVITHFDGVVRGELDLRLESAAASEF ADNTAEDAGFQLPPVLWDYSARRVMTLGWADGLPIGDNDALDSAGHDRRALGERVLSL FLNHALRDGYFHADMHQGNMKVAANGDIIAYDFGIMGHIDLYTRRVYAEILYGFIKRD YKRVAEVHFEAGYVPASQDVDEFARALRAVGEPIFGMDATHISMGRLLNYLFEVTERF GMETRTELILLQRTMVVVEGVARSLDPRINIWDVAKPVVEDYIKASIGPRAIAADLGK TARVLARFGPRLPTLVERALIAQAHEPEPQNKRRPWKRAASAGAALGILATLLFTHLT " /EC_number="1.14.13.-" CDS complement(1166704..1167456) /locus_tag="Silicibacter_1116" /function="COG: Methylase involved in ubiquinone/menaquinone biosynthesis" /gene="ubiE" /translation="MTEKSDSTTHFGFETVPEHEKAGRVQGVFNSVASKYDIMNDVMS VGIHRIWKDAMMDWLAPRPGQRLLDVAGGTGDISFRFLKRAGHGHSTVLDLTTPMLEE GRKRAEAEQMAECLDWVTGDAMALPFKDNTFDVYTISFGIRNVTRPQEALNEAYRVLK PGGRLMVLEFSQLPNDGLQKLYDLYSFNVIPRMGQMIAGDYDSYQYLVESIRNFPDQE TFLGMVKSAGFENAKHRNLSMGIAALHSGWKI" /product="ubiquinone/menaquinone biosynthesis methyltransferase UbiE" /transl_table=11 /note="identified by match to putative ortholog SPO0145 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1167543..1168394 /locus_tag="Silicibacter_1117" /function="COG: Formamidopyrimidine-DNA glycosylase" /gene="mutM" /transl_table=11 /note="identified by match to putative ortholog SPO0146 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="formamidopyrimidine-DNA glycosylase" /translation="MPELPEVETVMRGLQPSMEGVVIARADVNRPDLRWPFPDRMTER LSGRRVLSMRRRSKYILADLDSGETLLVHLGMSGRMTVSGDPLGQFVHSHPQLEKHDH VVFHMDNGARVTFNDPRRFGAMDLLETAKADSHKLLAVLGPEPLGNDFHESHLVSAFK GRRTPVKSALLDQGIIAGLGNIYVCEALFRAGISPRREAGKISTSRVTSLVPIIRQVL QDAIAAGGSSLKDFRQANGELGYFQHTFDVYGREGEPCRRAGCTGTVTRITQSGRSSF YCGKCQR" /EC_number="3.2.2.23" CDS 1168460..1169236 /locus_tag="Silicibacter_1118" /function="COG: Enoyl-CoA hydratase/carnithine racemase" /translation="MAYETINVDTQDHVCLIKLNRPEALNALNSVLLGELCAALEEAD ASDKVRCIVLTGSEKAFAAGADIKEMSEMSYVDVFTSNLFADANDRIAAIRKPIIAAV SGYALGGGCEVAMMCDFIIAAETAKFGQPEINLGVIAGMGGTQRLTRFVGKSKSMDMN LTGRFMTADEAERAGLVSRVVPAKKLIEEAMAAASKIAEKSVLTSIAAKEAVNRAYEL PLSEGMLFERRVFHSMFATEDQKEGMAAFLEKREAQFRDK" /product="enoyl-CoA hydratase" /transl_table=11 /EC_number="4.2.1.17" /note="identified by match to putative ortholog SPO0147 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1169561..1169824 /locus_tag="Silicibacter_1119" /gene="rpsT" /translation="MANSPQAKKRARQNEKRFAINKARRSRIRTFLRKVEEAIASGDK EAATAALRAAQPELMRGVTRGVYHKNTASRKISRLAARVKALG" /product="ribosomal protein S20" /transl_table=11 /note="identified by match to putative ortholog SPO0148 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1170422..1171834 /locus_tag="Silicibacter_1120" /function="COG: ATPase involved in DNA replication initiation" /gene="dnaA" /translation="MTDDTWGLLRKRLLKTVGQNNFTTWIEPLELDQVDGGVATFHVP TNFMGNYVSQNFADLILHEFNKSGEAVQRLAFKVAANSPTRPVQPTMSEAIEEPAPLQ TTVVDQLGNQEGNTSVKSPPEDLQAAPLDPRFTFDSFVVGKPNELAHAAARRVAEGGP VTFNPLVLYGGVGLGKTHLMHAIAWELKERNPELNVLYLSAEQFMYRFVQALRERKMM DFKHLFRSVDVLMVDDVQFIAGKDSTQEEFFHTFNALVDQNKQIIISADRAPGEIKDL EDRVKSRLQCGLVVDLHPTDYELRLGILQTKVQQNRKNYPDLKIADGVLELLAHRIST NVRVLEGALTRLFAFASLVGREIDMDLTQDCLADVLRASERKITVEEIQRKVSEYYNI RMSDIIGPKRLRSYARPRQVAMYLCKQLTSRSLPEIGRRFGGRDHTTVMHGVRRIEEL KTIDGQIAEDVEMLRRSLEA" /product="chromosomal replication initiator protein DnaA" /transl_table=11 /note="identified by match to putative ortholog SPO0149 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1172116..1173237 /locus_tag="Silicibacter_1121" /function="COG: DNA polymerase sliding clamp subunit (PCNA homolog)" /gene="dnaN" /transl_table=11 /note="identified by match to putative ortholog SPO0150 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="DNA polymerase III, beta subunit" /translation="MKISIERATLLKAVAQAQSVVERRNTIPILANVLIEAEGSDVMF RATDLDIEVVDKAPAQVERAGATTVAATTLHEIVRKLPDGALVTLDADAASGRLTVEA GRSNFSLATLPREDFPVMATSEYHSNFTANAAMLRRLFDKSKFAISTEETRYYLNGVY MHVATGESGGKALRCVATDGHRLARIDADLPMGAEDMPGVIVPRKTVGELRKLLDEDD MDIAVSVSETKVRFATPNITLTSKVIDGTFPDYTRVIPVGNTRRLEVDASEFAKAVDR VATVSSERSRAVKLQLDEDRLVLSVNAPDSGAAEEELAVAYSDERLEIGFNAKYLLEI ANQVDRENAVFMFNSSGDPTLMREGSDESAVYVVMPMRV" /EC_number="2.7.7.7" CDS 1173327..1174400 /locus_tag="Silicibacter_1122" /function="COG: Recombinational DNA repair ATPase (RecF pathway)" /gene="recF" /translation="MSHFRSHLRADLHLDTRPVAIHGNNGAGKTNILEAVSLFSPGRG LRRASAADMARQPEALGWKLRGVLQSSGQAYEVETSSEVGNARQVKIDNKSASQVALG RIARVVWLVPAMDRLWIEGAEGRRRFLDRIALSFDPDHAEASLSYEKAMRERNRLLKD NVRDAAWYRVLEGQMAETGFRIHQARMDAVARLTAAQAEAETAFPVAQLQLVQAEGDM PASAEALREMLDAGRMRDLTVGRTLVGPHRSDLIGTFLAKGLPAKDCSTGEQKALLVS LILANARALQAQEGAAPILLLDEVAAHLDAGRRAALYDEICALGTQAWMTGTGPELFQ ELGSRAQHLTVSDRGGTSEVTLQ" /product="DNA replication and repair protein RecF" /transl_table=11 /note="identified by match to putative ortholog SPO0151 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1174397..1175017 /locus_tag="Silicibacter_1123" /function="COG: Putative threonine efflux protein" /translation="MSLSLWDLVIYASAVFVLFLTPGPVWLALVARAMSGGFHAGWPL ALGVAIGDVVWPLVAILGVAWITAASAQIALVLKGVAVLVFVLMGLSTIRSAGQPIST NSRLTKPGRWAGFVAGVIVILGNPKAALFYMGILPGFFDLSQVTSADIALICAVSMAV PLIGNVMLAGFVSQVRVLLSSPVALRRMNLGAGYLLIAVACIIPFT" /product="transporter, LysE family" /transl_table=11 /note="identified by match to putative ortholog SPO0152 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1175010..1175597) /locus_tag="Silicibacter_1124" /function="COG: Transcriptional regulator" /translation="MGRAPQRRRLETRAKLLTVAAEIIDSHGVSALRVEDVVAQAGVA KGTFFSHFGDKDGLLAVILGARVMRYIEDMEDAPAPSSPAEIAQRLAPLLDFISQDRI IFDLLLRYSGTTGAEIEEVVTEGFLRQIALFIRWITNMQAKGQISQNGNPELLAEGIQ GFLNHVLATGFCMEHSNTPPPSKALVPYLEQWLLK" /product="transcriptional regulator, TetR family" /transl_table=11 /note="identified by match to putative ortholog SPO0153 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1175713..1176306 /locus_tag="Silicibacter_1125" /function="COG: Acyl carrier protein phosphodiesterase" /translation="MSTRKILVLNGHPGQNSLNKSLADAYRRAAEAAGHELRYQDLSQ MQFDMDFGEGGYHDTKPLEPALQSFVADLEWAEHLVVTTPLWWGAFPAKLKGLFDRAL LPGQAFDTRNTNAFGVPAPMMTGKTARVMLTSDTPSWFLRLLYGNAIKKIMSRQILGF VGIKPVRYTSFAAASHPKPGQADQWLKTVANLGRAAA" /product="NAD(P)H dehydrogenase, quinone family" /transl_table=11 /note="identified by match to putative ortholog SPO0154 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1176392..1178809 /locus_tag="Silicibacter_1126" /function="COG: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit" /gene="gyrB" /transl_table=11 /note="identified by match to putative ortholog SPO0155 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="DNA gyrase, B subunit" /translation="MSENEQAPAEYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHH MVYEVVDNGIDEALAGHADRVTVTIHADSSVSVSDNGRGIPVDIHAEEGVSAAEVIMT QLHAGGKFDSNSYKVSGGLHGVGVSVVNALSDWLELRIWRNGKEHVARFERGDTVKHL TVVGDCGDRTGTEVRFLASTDTFSNLEYSFETLEKRLRELAFLNSGVRIVVADERPAE RLESELFYEGGVNEFVKYLDRSKTPVMDAPIYIKGEKDDIGVEIAMWWNDSYHETVLP FTNNIPQRDGGTHVAGFRGALTRTINSYAQSSGIAKKEKVSFTGDDAREGLTCVLSVK VPDPKFSSQTKDKLVSSEVRPVVESLMGEKLAEWFEENPNVAKQVVGKIIEAALAREA ARKARELTRRKTAMDVNFLAGKLKDCSEKDPAKTEVFLVEGDSAGGSAQTGRDRQTQA ILPLKGKILNVERARFDRMLSSQEIGNLVMALGTGIGRDEFNIEKLRYHKIVIMTDAD VDGAHIRTLLLTFFYRQMPELIEGGYLYIAQPPLYKVSRGKSEVYLKDQAAMDDYLIN QGVDGALLRLGDGSEIAGQDLTRVVDEARRLKRLLDAFPTHYPRHILEQAAIAGAFVP GAVDADLQGVADKVAARLDLIALEYERGWQGRITQDHGIRLARILRGVEEVRTLDGPM LRSGEARKTGSFTKSLQEIYGAPATLHRKDRQQAIYGPLDLLKAILEEGEKGLTLQRY KGLGEMNPDQLWETTLDPDARTLLQVRVDDMIEADDLFTKLMGDVVEPRREFIQKNAL SVENLDF" /EC_number="5.99.1.3" CDS complement(1178806..1179582) /locus_tag="Silicibacter_1127" /function="COG: DNA repair proteins" /gene="radC" /translation="MGKSERFEEDMLPLFEGANGDSDEAPLLPIMQGRIPSYIRDHRA RLRERFMSAGAIGLPDYELLELILFRSIPRKDVKPLAHQLLASFGDLNRVVTASPERL AEVQGIGQAVICDLKIFEAAAQRMARSRVLQRQVIASWDALLDYCHTAMAHRETEQFR VLYLDRKNILIADEEQARGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQ ADIGMTRKVGAALGALDITLHDHLIIGASDELSFRSEGLL" /product="DNA repair protein RadC" /transl_table=11 /note="identified by match to putative ortholog SPO0054 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1179720..1180877) /locus_tag="Silicibacter_1128" /function="COG: DnaJ-class molecular chaperone with C-terminal Zn finger domain" /gene="dnaJ" /translation="MSKRDYYEVLGVSKGASADEIKKGFRKKAKELHPDRNADNPDAE AQFKEANEAYDVLKDPERKAAYDRYGHAAFENGMGGGGGGRAGGHPGGDFSSAFSDVF DDLFGDFMGGGGGRAGARQRATRGADLRYNLRLSLEEAFAGLHKTINVPTSVSCTSCE GTGAEGGAEPTTCPTCSGMGKVRAQQGFFTVERTCPTCSGLGQMIKNPCKTCNGHGRV EKDRSLSVNIPAGVETGTRIRLAGEGEAGLRGGPPGDLYIFIEVARHELFEREGNNLH CRVPVSMAKAALGGAIEVPTIDGGRGRVQIPEGSQSGRQMRLRGKGMPALRGGGTGDM FIELAVETPVNLTPRQKEILKEFDEISEENTNPETRSFFSSVKSFWDGMKG" /product="chaperone protein DnaJ" /transl_table=11 /note="identified by match to putative ortholog SPO0044 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1180954..1182882) /locus_tag="Silicibacter_1129" /function="COG: Molecular chaperone" /gene="dnaK" /translation="MSKVIGIDLGTTNSCVAIMDGSQPRVIENAEGARTTPSIVAFTD EERLVGQPAKRQAVTNPDNTIFGVKRLIGRRFDDSDLAKDKKNLPFAVINGGNGDAWV EAKSEKYSPSQISAFILGKMKETAESYLGEEVTQAVITVPAYFNDAQRQATKDAGKIA GLEVLRIINEPTAAALAYGLDKAETQTIAVYDLGGGTFDVTILEIDDGLFEVKSTNGD TFLGGEDFDMRIVNYLADEFKKEHGVDLTKDKMALQRLKEAAEKAKIELSSSSQTEIN QPFISMDPSSGQPLHLVIKLTRAKLESLVGDLIKNSMKPCAAALKDAGLSASDIDEVV LVGGMTRMPKVIEEVTKFFGKEPHKGVNPDEVVAMGAAIQAGVLQGDVKDVVLLDVTP LSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKML GQFNLEDIPPAPRGMPQIEVTFDIDANGIVSVSAKDKGTGKEQKITIQASGGLSDEDI EKMVKDAEDNAEADKERRELIEARNQAESLIHSTEKSIEDHGDKVDPSTIEAIELAIA ALKDDLEGDKANAEKIKSGIQNVTEAAMRLGEAIYKAQAEEGGADEPSAADEDASAGP GDDDIVDAEFEDLDDNKR" /product="chaperone protein DnaK" /transl_table=11 /note="identified by match to putative ortholog SPO0043 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1183231..1183692 /locus_tag="Silicibacter_1130" /function="COG: Alkylated DNA repair protein" /translation="MSVRMTSAGEYGWFSDPSGYRYEGKHPSGRKWPEIPSEVLNVWT TLVDRERLPDCCLFNYYGEGARMGLHQDKDEADFSFPVVSISLGDDGLLRLGGTSRKE KTQTVWLNSGDVVVMGGEARLAYHGIDRIRFRSSRLLPKGGRVNLTLRVVT" /product="alkylated DNA repair protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0042 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1183709..1184587) /locus_tag="Silicibacter_1131" /function="COG: ABC-type polysaccharide/polyol phosphate export systems, permease component" /translation="MDQQEIHVRISHLLLNSEAMFRYRTDKSPLSRAITLSEVVFHSV VRSVRSKHNNAFMALGINIIQSVLFVMFFYFMFTVMGIKGAAIRGDFLLYMMSGVFLF MTHTKTVGAVVGAEGASSPMMQHAPMNTTIAILSAALGALYLQVLSMLIILFAYHVAF TPIHIEEPVPAFGMLLLAWASGAAIGLVLYVLKPWMPSAIGIISTIYQRSNMLFSGKM VLANTLPGYMLPMFIWNPLFHTIDQARGYIFINYNPHVTWWEYTMWLALIFLVLGLMG EFYTRRAVSLSWGARR" /product="ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO0040 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1184714..1185448 /locus_tag="Silicibacter_1132" /function="COG: 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase" /gene="cysQ" /transl_table=11 /note=", [EC:3.1.3.7] , Inositol-1-monophosphatase (EC 3.1.3.25) (IMPase) (Inositol-1- phosphatase) (I-1-Pase)., Inositol monophosphatase, Inositol monophosphatase family, bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase" /note="High confidence in function and specificity" /product="cysQ protein" /translation="MEIYNSDDFDVKQKSDDSPVTVADEAADALISAGLRSAFPDVML VTEEQAESHSATGDTFLIVDPLDGTKEFINRRGDFTVNIAYVEAGVPTRGVVYAPARD RMFYTLADGSAVEEKGPFSKNEVGETTALKVAESDNSALLVVASKSHRDQATDDYINK YSVKDTRSAGSSLKFCLVATGEADLYPRVGRTMEWDTAAGHAVLSGAGGRVVRFDDHN PLRYGKDGFANPFFIAHAPAVELKDA" /EC_number="3.1.3.7" CDS 1185449..1186249 /locus_tag="Silicibacter_1133" /function="COG: CMP-2-keto-3-deoxyoctulosonic acid synthetase" /gene="kdsB" /transl_table=11 /note="identified by match to putative ortholog SPO0038 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="3-deoxy-D-manno-octulosonate cytidylyltransferase" /translation="MSVLIVIPARYASTRFPGKPLAELTGATGKTRSLIERSWRAACA VNGVDRVVVATDDDRIKAASETFGAEVVMTSETCANGTERCAEAHAALGGGYEVVVNL QGDAPLTPPWFIEDLINGLQAAEGMGLATPVLRCDGATLNSLLEDRRAGRVGGTTAVF GADHSALYFSKEVIPFQSGRYSDAECTPVFHHVGVYAYRPDALLAYPTWPVGPLETLE GLEQLRFLENGRKILCVEVDARGREFWELNNPEDRPKIEEMMRKMGVE" /EC_number="2.7.7.38" CDS 1186400..1187293 /locus_tag="Silicibacter_1134" /function="COG: UDP-glucose pyrophosphorylase" /gene="galU" /transl_table=11 /note=", [EC:5.4.2.8 5.4.2.2 2.7.7.9], UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (UDP-glucose pyrophosphorylase) (UDPGP) (Alpha-D-glucosyl-1-phosphate uridylyltransferase) (Uridine diphosphoglucose pyrophosphorylase)., Nucleotidyl transferase, Nucleotidyl transferase, galU: UTP-glucose-1-phosphate uridylyltransferase" /note="High confidence in function and specificity" /product="UTP-glucose-1-phosphate uridylyltransferase" /translation="MPRKVTKAIFPVAGLGTRFLPATKSVPKEIMTLVDRPLVQYAID EARAAGIKEFIFVTSRGKGALEDYFDHAPVLEQELRKKGKDQLLEVLKATNMGSGDIA YIRQHKALGLGHAVWCARRLIGDEPFAVMLPDDVIAADKPCLQQMVEAYAETGGNMVA AMEVAPEKTSSYGILDVKDSKDAVMPINAMIEKPSPEEAPSNLAVIGRYILSPSVLQN LNKRKQGAGGEIQLTDAIAEDIARDVPVCGYRFKGRRFDCGSKSGFLQATVAFALERE ELRDDLMEYLSTLSAHRQAAE" /EC_number="2.7.7.9" CDS 1187394..1188377 /locus_tag="Silicibacter_1135" /function="COG: UDP-glucose 4-epimerase" /translation="MANVLVTGGAGYIGSHACKALKQAGYTPVTYDNLVTGWQDAVKF GPFEQGDLTDRGRLDEVFAQYKPVAVMHFAALSQVGEAMSEPGRYWANNVGGSLCLIE AAVAAGCLDFVFSSTCATYGEHDNVVLDENTPQQPLNAYGASKRAVEDILKDFEAAHG LRSVIFRYFNVAGADPEAEVGEFHQPETHLVPLMIQAIKGERAALTVFGTDYDTPDGT CIRDYVHVCDLVDAHILGLKWLEDGKGSRVFNLGTGTGFSVKEVLSHSHAVTNTEVPH VIGPRRAGDCTKLVSGSVRAGEELGWEPKRSTMDQMISDAWRWHQSGHYER" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0796 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1188394..1189455 /locus_tag="Silicibacter_1136" /translation="MPKISLMAAYRLRLKRRRCLWRAYRARRQLRCIVDNTINIGRDD ILVVVVLRNEAQRLPYFLEYYRRLGAAHFLVVDNTSEDGSLALLQREARRGDLSLWQT HDSYRASRFGIDWSGWLLMQHGSGHWCLTVDADELLVYPGMDQMDLPMLTQRLDQIGL EGFGALMLDLYPKGPLGTQEYRVGQDPTEVLRWFDASPYHAVRQAPQGNLWLQGGARA RMFFADTPERAPTLNKIPLMRWHWRYAYTNATHALLPPRLNAIYGGTEGQAPSGVLLH TKFLPEIVSKSKQERSRAEHFHNPTLFEGYYAQIETKPDFWHPDSQEYHSPEQLAELG LCRGFDARTTVAGGQRNQF" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0037 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1189594..1190580 /locus_tag="Silicibacter_1137" /translation="MRIRRKRRILRALRKSRNLHCVQNNTSRIRPGDILLVCTFRNEQ VRLPYFLQYYRSLGVNHFLFIDNGSTDGAQGYLAGLQDVSVWNAQGSYKRATFGVDWA NALLRKYGHGHWCLVVDADELFVYPFCDTRPIRALTDWLDSSQIRSFSAMLLDMYPKG RVDEVPYKPGQDPLEITQWFDSGNYSITRNKRYGNLWIQGGPRARVFFADRPKLAPAL NKIPLVKWDRRYAYVSSTHMLLPRGLNQVYEINGGEKASGILMHTKFLDTFPAKAEEE LKRREHYAGSVEYQAYVKEAESSPELWCKWSEKYINWRQLEILGLMSKGNWA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0036 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1190577..1192277 /locus_tag="Silicibacter_1138" /translation="MSNVGVIMLVHTALERAEQVVRHWTAAGCPVVLHVDRQVSKQVF QEFCARLKDDPLVRFSRRHRCEWGTWGIVAASQSASELMLSEFPDVSHIYLTSGSCLP LRPVKELQTYLAARPDIDFIESATTSDVPWIVGGLSTERFTMRFPFSWKRHRKLFDRY VRLQRKLKLRRRIPAGLVPHMGSQWWCLTRRTLTAILTDADRARYDAYFRHVWIPDES YYQTLARLHSDNIESRSLTLSKFDYQGKPHVFYDDHLQLLRRSDCFVARKIWPHAERL YQAFLCPSATDINRTEPNPGKIDRIFAKAVERRIRGRKGLYMQSRFPAKGVESQQTCG PYSVFQGFSELFEDFESWLARATGARVHGHLFAPERAEFAGEQRLFNGCLSDSALLRD RNPQSFLSNLIWNTRGERQCFQFGPHDTQSINWFIAQDSNAQISVISGAWSVSLFKTN RSFSDLRREAAKLQRIEAEHLKILRGRWTHARIRVWSMAEFIEAPMENLQTIVDEIGP MSRSHILEAPQMVDLTGFGQFLQNLKNQGMHPYLMGDFPARSAPKQPMRQARKTYIVK " /product="core-2/I-branching enzyme family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0035 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1192284..1193723 /locus_tag="Silicibacter_1139" /translation="MSADFTSFVVLAEMRTGSNFLEANLNALRGVSCLGEAFNPHFIG YPNQESIFEVSREARDDDPHALVDAIHAAEGLCGFRYFHDHDPRILERILNDPQVAKI ILTRNPLDSYVSWKIARTTGQWKLTNVKRRKEAKAVFDAEEFGAHVDGLQEFQIAVLN QLQRTGQTAFYVAYEDLQSLEVMNGLATWLGVDARLDALDDSLKRQNPAPVIAKVENP EEMTEALAGMDRFNLTRTPNFEPRRGPAVPGYVAGVVTPILYMPVRNGLEAHVSEWIG GLDKVPAEGLITGMNQKQLRQWRHANPGHRSFTVVRHPLARAHHVFCTKILPNGPGSM KHIRNTLRRQFHLDIPQDGIDVGYSRERHRQAFEQFLTFLKSNLAGQTAIRVDARWAS QAQSISGFAELGAPDLILREEDLATDLPWLARKLGRMSPAEVPPVPADQPIALAEIYD DALEVLCRSIYTRDYLTFGFDSWSPRIER" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO0034 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1193797..1194261) /locus_tag="Silicibacter_1140" /function="COG: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)" /gene="ptsN" /translation="MQISNILTQEAVRVIGAASSKKRLFQEVAEVAQTAYGLKASLTV EALLDRESLGPTGVGHGVALPHARLSGIDRVVGVYVSLEKPLDFGAVDRQPVDIVFAL LAPVDAGVEHLKALALVSRTLREQSFCTKLRANPDTATLYTILTESQSVQAA" /product="PTS IIA-like nitrogen-regulatory protein PtsN" /transl_table=11 /note="identified by match to putative ortholog SPO0077 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1194317..1194880) /locus_tag="Silicibacter_1141" /function="COG: Ribosome-associated protein Y (PSrp-1)" /translation="MRYKVSGKQIDIGESLQTHVETELSAVLEKYAGRPTDAQVVFSR NAHEFVCEAIVHLSTGLTCQAKAHATEIYASFESCLEKMDKQLRRYKRRLKDHHRDRA EPVELMGASSYILASEEAESDQEPDSLQPIIVAEMETKIPSLSVGEAVMQMELAGSPV LVFRNEGKDGLNVVYRREDGNIGWIDP" /product="ribosomal subunit interface protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0078 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1195200..1195958) /locus_tag="Silicibacter_1142" /function="COG: ABC-type spermidine/putrescine transport systems, ATPase components" /translation="MAKPKLEVTSGSSGLRIEKMRKSYRKRVVIRDVSMELNRGEVVA LLGPNGSGKTTSFYTIAGLVFPEAGRVTLDGQNVTSLPMYRRARLGIGYLPQEMSIFR GLSVEDNISAVLDIAVSDDHKRRERLEELLSDFSIEHLRRAPALALSGGERRRVEIAR CLAADPKYLLLDEPFAGVDPISVGDIRNLVADLKNRGIGVLITDHNVRETLEIVDRAY ILHDGQVLMSGSPSEVVENENVRRVYLGDNFRIS" /product="ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0079 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1195958..1196392) /locus_tag="Silicibacter_1143" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MAQGTGVSFGVLQTDTSQPVDIASDNMSVNQEDGSALLTGNVLI IQGEMRLSADNVLVVRRTEGNGIERLEARGNVLLVSGEDAAEAREADYTIQSGTVVMR GNVLLTQQGSTLGAEQMTVNMTTGNATLSGRVRTTLPGSGGN" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0080 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1196462..1197061) /locus_tag="Silicibacter_1144" /translation="MDRYSRVVSYLKVALPLTALALLSTLFLISHNINTDPSIPFAEI ELENRLRGQQVTAPFFTGTTATGQEITIAATKALPGGDGEGASASDLEAEILTTEGRR ILLLSDRGSIRPDQDLAVLVGNVRIITADGTRVESERLNAELSGLQVVSPGPVTAQGP MGDFSAGTMRIFTDSKNAPVHIEFTEGVKLVYDPAKIER" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0081 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1197134..1197748) /locus_tag="Silicibacter_1145" /function="COG: Ribonuclease D" /gene="rnd" /transl_table=11 /note=", 3'-5' exonuclease, 3'-5' exonuclease" /note="High confidence in function and specificity" /product="hypothetical protein" /translation="MATHLYQHDLPNSLDLGPVVAIDCETMGLNPHRDRLCVVQMSSG DGDAHLVQIAKGQTDAPNLTAMLTNPDVLKLFHYGRFDIAALYHRFGALAAPVYCTKI ASRLVRTYTDRHGLKNLTQDLLGQDISKQQQMSDWGAETLTRAQMDYAASDVLHLHRL RDALDQRLVREGRSDLAQACFDFLPTRARLDLAGWPDTDIFAHS" /EC_number="3.1.26.3" CDS 1197801..1197926 /locus_tag="Silicibacter_1146" /translation="MRGELNRQRAADQAGPEPLMVAIGAVFEGCESFIVAKIDSE" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1198012..1199463 /locus_tag="Silicibacter_1147" /function="COG: Glycerol kinase" /gene="xylB" /transl_table=11 /note="identified by match to putative ortholog SPO0855 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="xylulokinase" /translation="MFLGLDVGTSGLRALLADEGGNVLGVADAAYGVSHPKTGWSEQD PQDWITACQSAVAELRGEHPEAISALRGIGLSGHMHGATLLDVDGKVLRPCILWNDTR SATEAAELDGTEGVRDLSGNIVFPGFTAPKLAWVKTHEPDIYAQIAKVLLPKDYLRFW LTGSYISDMSDSAGTSWLDVGARDWSPTLLEASGMRRDQMPDLVEGSAAGGELRADLR ADWGIKGSVVVAGGGGDNAVAACGAGCFREGEGFVSLGTSGVLLAAKSAYKPDPASAV HTFCHAVPQTWYQMGVILAATDCLNWLSRTLGQTPATLAGRLPNEVKGPSSITFLPYL SGERTPHNDAQIRATLAGLDIGDGPAELTQAVMEGVAFALRDCLEALKGTDTSFTRLL AVGGGTRSPYWVETLATVLGVSLDIPDKGEFGAALGAARLAMTATGADLATVMRAPPI SHTIDPRSDLIEAYDTSYARYRALYPNMKALMT" /EC_number="2.7.1.17" CDS 1199460..1200770 /locus_tag="Silicibacter_1148" /function="COG: Xylose isomerase" /gene="xylA" /transl_table=11 /note="identified by match to putative ortholog SPO0856 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="xylose isomerase" /translation="MTTGFFGDVSKITFEGADSTNPLAFRHYNPDEVILGKRMEEHLR FATCYWHNFVWPGGDPFGGQTFDRPWFKDTMHAAKLKADVAFEMFTLLQSPYYCFHDA DVRPEGANFAENTRNLNEIVDYFAQKQEETGVKLLWGTANLFSNARYMSGASTNPDPD VFAFSAATIKTCMDATHRLGGENYVLWGGREGYETLLNTDLAQEDQQMGRMLNMVVEY KHKIGFKGAILVEPKPQEPSKHQYDYDAATVYGFLKRHGLENEVKLNLEQGHAILAGH SFEHEIATAQALGIFGSIDMNRNDYQSGWDTDQFPNNTPEVALAYYHILKHGGFTTGG TNFDAKLRRQSIDAEDLLMAHIGGMDICARGFKAAAAMIEDGTLDQFVTDRYAGWQTD PAQDMLAGKLSLDEIAKRVEAEDINPKPRSGRQEYLENLINRFV" /EC_number="5.3.1.5" CDS 1200771..1201778 /locus_tag="Silicibacter_1149" /function="COG: Galactose mutarotase and related enzymes" /gene="galM" /transl_table=11 /note="identified by match to putative ortholog SPO0857 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="aldose 1-epimerase" /translation="MKDAQIVEHGLHRGHTLKEARLQSAGLSISLLNFGAVTRDLRLL EENRPLILGFQDPADYLLNPGYLGVIAGRVAGRIKNARFTLGRQRFQLNPNEGDTLLH GGANGLCHVFWNLEVLSENTARLRYHSPEGEGGFPGAAEITLTVMLEAQAVVYDLTAE VTAPTPFSLAQHNYYNLMGGAQSIREHRLQVDATSYLGLDDANVPDGRLLALDGCHHD FRLGRSFAELDPQTKGSDVAVVFDECRDPEQPVASLIAPDGLQMRVISDQPCAQIYTA SALPEQPGALPGQRIGSDMGVCIEPQGYANAVNLPQFPSMIATPERPYRQRLRLEFGR I" /EC_number="5.1.3.3" CDS 1201778..1203085 /locus_tag="Silicibacter_1150" /function="COG: Cytochrome c peroxidase" /translation="MRWFILLTLMGASATQAQSRPDLGPRPAFPAPDMAAVELGQLLF YDPILSGNRNIACSTCHHPRLGTGDGLSLGLGEGGIGLGPDRKPDPANLPEQRIPRNA PGLWNLGAPEFTVMFHDGRLEDHPDHPGGIRTPLGEDMVAGFDDALAAQAMFPVLSAD EMAGHYSENEVAQAVRLGQLSTPGGAWDRIAARVEAIPAYRVAFDEVLGEGTPITFAD IGNVLADFIRFEWRADMSPFDAYMLGQGDLPKAAKRGMELFYGAADCSQCHTGWFQTD HGFHALAVPQIGPGKAARFETHSRDEGRIRVTGRAEDAFAFRTPSLRNVGQTAPYGHS GAFATLEDIVWHHLSPEQSLSSYSKSQAVLPQLEGAQDWTIQDNAAERAALIAAVDLD PVSLTAAEVADIVAFLHALTDEEAAKGRLGVPAEVPSGLPVDQ" /product="methylamine utilization protein MauG, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0858 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1203114..1204664) /locus_tag="Silicibacter_1151" /function="COG: Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases and related enzymes" /gene="ymdC" /translation="MMRFLKTLALIGLTLAAFVMLARLLFPLPDISNREISSALPASD QTSIGATVADLNAAHVGQSGIIPLRSGTDALASRVELIRRAEASIDAQYYIWHDDTSG VLLLEELRNAALRGVRVRLLLDDNGVPGLDATMATLNAQPNFEIRLFNPSTIRRPKLL GYSFDFFRMNRRMHNKSLIVDGAVAIIGGRNIGDEYFDVQRDAFYIDMDALAAGKVVP ETATVFDDYWNSASVFALETIVSSDGNLITFDQRVSEVMATPEAQRLMGDLQSSADKF ARGEMPMEWTNVRVVADDPVKGQGSATSDQLMISRLGEILGQVETRLDLVSAYFVPGQ RGTEYLTDLAAAGVDVRVLTNAMNTTDVLMVHSGYTRYRRALLEADVSLYELKLRAQM SADANRQLKPFGLSGASLHAKTFAVDGDRVFIGSFNFDPRSATLNCEMGFLIESPTLA GQVSAGFDGPLLTVSYQPALTPKGKMIWREPIEDGETLIYQEEPGATWFQQIAIAVIG VLPVEWLL" /product="Hypothetical protein ymdC." /transl_table=11 /note=", Phospholipase D/Transphosphatidylase" /note="Conserved hypothetical protein" CDS 1205006..1206208 /locus_tag="Silicibacter_1152" /function="COG: NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain" /translation="MTFLILLVLLAFALYSLFSKRIDRSVLTLPILFTGLGFLLSKPL SEVIPAGLIHEGKAGLAEVTLILVLFSDASHVRLRSLARGWQYPTRMLVIGLPLTIAS GTAVAFWLNPSSGLAVALLTAAVLTPTDAALGQAVVNSPDVPDRLAQTINVESGLNDG LVLPFVLTGAILASGFAGEAHTAGLALEALIEVILGPLAGIAVGWVAARAMDWAQNRD LMQEAAGAVVFLVTAFAAYLFAVLIHGNGFIAAFVAGMVFGNSYRHNIHFISEFMEGA GQLLTMAAFLVFGAFLLPDGLAHAGVSTLVLALLFLTVVRMGPILLSLIGSGLPTREK LFLGWFGPRGLASILFTLLMMDQFDIPNEEELLACVSLTVGLSILLHGITSTPLASWI SQEGKRNT" /product="Cell volume regulation protein A homolog." /transl_table=11 /note=", Sodium/hydrogen exchanger family" /note="Conserved hypothetical protein" CDS complement(1206272..1207042) /locus_tag="Silicibacter_1153" /function="COG: ABC-type oligopeptide transport system, ATPase component" /translation="MRTAIDIKGLNVYFGDSHNLFHAVKNASFSVDSGASFGLVGESG SGKSTILKAITGLAPYWEGEMTVAGHPLAGKRDRTFYKTVQMVFQDPYASLHPRQSVD QVLSETLRLHGFKDINDRVDQLLKDVGLGPAFRFRYPHQLSGGQRQRVAIARALAPNP KILLLDEPTSALDVSVQAEILNLLKDLQAEHDLTYVMVSHDLAVVAHMCSTAAVMRNG EIMEILSIDDMRAGKTAHDYTQHLLNASANRVASVETA" /product="peptide/opine/nickel uptake family ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO1547 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1207039..1207896) /locus_tag="Silicibacter_1154" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component" /translation="MSTLLDIENLWVKFPTRNGIFDAVRGVSFSLGKERLGIVGESGS GKSMTGRAILRLIRKPGIVEAGHIKLHDTNLLDLSERDMRKVRGEKISMVMQDPKFSL NPVVTVGDQIIEAYRLHAKSSRAEARSKALEMLEAVSIRDPERVMKAYPHEMSGGMGQ RIMIAMMLIPNPEILIADEPTSALDVSVQGQVLSIMDKLVRERGMGLIFISHDLNLVS QFCDRVLIMYAGRIIEVCDADKLHEAKHPYTQGLLGSLPRFDHPKPRLQVLDRDPQWR DTASVEGRP" /product="peptide/opine/nickel uptake family ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO1546 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1207893..1208810) /locus_tag="Silicibacter_1155" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /translation="MSSQTMTLREWLLTDTPTSRRQARLAAYYKGWLTLRSNHMAMGG LAIIVLLVAVAIFAPLLAPHDPYYQDLGNRLQPLGTEGHILGTDSLGRDILSRLIWGA RITLYIVALVAMIAPIVGLLVGTVSGYVGGWVDIMLMRVTDIFLAFPRLVLALAFVAA LGAGIENAVLAISLTAWPPYARLARAETLTIRSSDFISAIRLQGAGPLLIITKHIWPL CISSLIVRVTLDMAGIILAAAGLGFLGLGAQPPSPEWGAMISEGRRFILDYWWVATMP GLAIFAVSLAFNLLGDGLRDVLDPKDSSS" /product="peptide/opine/nickel uptake family ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO1545 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1208807..1209865) /locus_tag="Silicibacter_1156" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /translation="MAFYSNVPKRQPWLPLPPWARSMGITLLSVSITMLGLLFVTFLI GRVMPIDPVLAVVGERASEEQYNAVYLELGLDKQLIIQFFYYVGDVLQGDFGKSLLTA RPVSEDIARVFPATFELATIGIIFGCVLGVPLGVIAAVRRGSWVDQIARVVALVGYSM PIFWLGLMGLLLFYGMLGWVGGPGRQGIFYEDMIPSVTGMILVDSIIAGDWGAFWDAF SHIILPASLLGYYSLAYISRMTRSFMLEQLSAEYITTARVKGMSEWAVVMNHAFKNIR VQLITVIALSYANLLEGSVLTEIIFSWPGIGNYITTALLSADMNAVLGGTVVVGLVFI VLNVFSDLLYKVFDPRSK" /product="peptide/opine/nickel uptake family ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO1544 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1209867..1211465) /locus_tag="Silicibacter_1157" /function="COG: ABC-type dipeptide transport system, periplasmic component" /translation="MNAFSKLIGSAALGLALGVTALPAVAATPDNMLVIANRIDDITT LDPAQSFEFAGADVIRNMYGKLVNFDPSNLEAGYQPDLAESWTVSEDGKTITFTMREG VKFHSGNPVRAEDAAFSLRRVIKLNKTPSFILTQFGFTPENVDEMITVDGNTVSITTD KRYATSFVLNCLTATLGAIVDEKLVMEHDKDGDLGNEWLMTNSAGSGPYKLASWKPKE SVTLTANPDYYEGAPAMQRVIVRHVQESATQRLMLERGDIDVARDLTPADVDGLAGID GVEVQREMRGRLMYVSFNQKHPELSKPQVRQALKYLIDYDGMENSFLKNWYVKHQNFL PKTYLGAVDENPFSLNIEKAKELLAEAGVPEGLELTVGVREAQERLEIAQSLQNTFSQ AGIKLNLEVGTGKQVLGKYRARELDIYLGAWGPDYPDPQTNAGTFAYNPDNSDAANAT GLLAWRNGWDTAGLTDKVAAAVVEGDTVKRADMYHEIQAEFRDTAPFAVMFQLVEQAG ISEKVEGLNLGGAITAAAYWDVTK" /product="peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO1543 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1211523..1212572) /locus_tag="Silicibacter_1158" /function="COG: Zn-dependent dipeptidase, microsomal dipeptidase homolog" /translation="MNTPLIFDGHNDLLLRLHNKDVGMDQAGVFGSGGRQIDVDKAKA GGFGGGFFAIFVPGEESVSHDEEMMKDTYDLPLPEQVTWHNAIKVALSQAALLIELER QGALQICRSTAEIRTAMEQGLMAAVMHMEGAEAIDRDFHTLDVLHGAGLRSLGPVWSR PTRFGHGVPFRYPSTGDTGEGLTEDGFRLIKRCNEMRIMIDLSHMTEAGFWDVARVSD APLVATHSNAVALTRHSRNLTDRQLHAIRDSDGMVGLNFAVAFLREDGRMDENTPISR MLDHLDYLIAEVGEDRVGMGSDFDGATVPAEIGTIAGLPALRRAMRDRGYDDALMKKL CHENWLRVLGKTWGE" /product="renal dipeptidase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1542 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1212912..1213952 /locus_tag="Silicibacter_1159" /function="COG: Threonine dehydrogenase and related Zn-dependent dehydrogenases" /translation="MKAVLYETFKELPKLVTVEDPTPDPDGVVIKVEATGLCRSDWHG WMGHDSDIVLPHVPGHEFAGVIVALGKNVRNWTVGDRVTVPFISGCGACSECHAGHQQ VCHNQQQPGFTHWGSFAEYVGVRQADLNLVALPQEMDFATAASLGCRFATSFRAVVDQ AQTRAGQWVAVHGCGGVGLSAVMIAQAVGANVIAIDIDDEKLNLAQELGAVATINGAR VADVPEAVIDLSRGGAHVSLDALGHPLTCFNSIQNLRPRGKHVQVGLMLAEHSTPSVP MAKVIAKELEILGSHGMQAHRYDAMLDMIASGKLDPRRLVGREISLDAAPSALVKMDQ FQSIGATVITTF" /product="alcohol dehydrogenase, zinc-containing" /transl_table=11 /EC_number="1.1.1.1" /note="identified by match to putative ortholog SPO1889 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1214057..1215256 /locus_tag="Silicibacter_1160" /function="COG: Predicted flavoproteins" /translation="MQDWDAVVIGGGPAGLMAAGEVARQGHRVLLVEAKPSPARKFLM AGKSGLNLTKDEPFEDLLAQYGDSAEWLAPMIKAFDAAAVQDWARGLGQELFTGSTGR VFPTVMKGSPLLRAWLQDLDTHRVTRQLGWRWTGWQQDGQLLFGTAAGPQIVTSRATI LALGGASWARLGSDGAWAALLASRGVALAPFQPSNAALSVAWSDHMTPHFGAALKAVA WQAGALQARGEATLSQRGLEGGGLYTLTPALREGQPLFVDLSPDLNEGDLARRLAKPR GKTSWSNHMRRTLKLATVKMALLQEFGRPLPQDPESLARLIKHLPVRHTGLRPMDEAI STAGGVRRDALDDGLMLKAIPGTFCAGEMLDWDAPTGGYLLTACFATGRWAGQAAARY LASSATR" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3436 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1215229..1215819) /locus_tag="Silicibacter_1161" /function="COG: Glutathione S-transferase" /translation="MYQVIGVPKTRAFRVLWTLEELGQSYDLVPAQPQSAEARAANPS GKVPALVEDGESITDSVAIITYLADKHGALTAPAGTLARARQDAITNMVIDEMDAILW TAARHSFILPEDRRVPEIKDSLRWEFANSIKRINAQLSGEFVAGDQFTIADVLMTHCL NWARGAKFDVEGDAVLDYGKRMRARPAFQRVAELAK" /product="glutathione S-transferase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3435 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1215895..1216923) /locus_tag="Silicibacter_1162" /function="COG: DNA polymerase III, delta subunit" /translation="MKLSPREAEGYFARPDPGKTGLLIYGADAMRVSLKRQQMLAALL GPGAEEEMRLTRMPASELRKDPAQLLDAVKAVGFFPGIRAVFVEDANDSATPAITTAL EAWQPGDAQIVVTAGQLKASSKLRKAFETHTNAYATGIYDDPPSRAEIERILSEAGVR DVPGDSMSALADIANDIGPGDFSRMIEKLSLYKNGDNSPLTLEDIDAVAPQSTEAALD DLLNVVAEGRSADIGPVLRRLQAQGTNAVTLCIGATRHFRTLYTIAAHPGGAAQGIGG LRPPLYGKRRDRMLRQAQGWGAQKLQNALTILTDTDLQLRSAGQSAPALALTERAMIR LAMLARAR" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3434 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1216920..1217453) /locus_tag="Silicibacter_1163" /translation="MLLPDRRKFLKLTLALPLGASLSACGFEPVYGPVGAGTALRDQI AFQSPETIGAPRDSDAYYFVRRLETRLGRSGAPAYRMDLTLDTKEVGQAITAEGSITR YSLTGTAGYSLVRLSDGQIVASGEVENFSGYSASGTTVQTQAGETDAHERLMVILADQ IVTRLYAAPGLGRPEGS" /product="lipoprotein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3433 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1217440..1220013) /locus_tag="Silicibacter_1164" /function="COG: Leucyl-tRNA synthetase" /gene="leuS" /transl_table=11 /note="identified by match to putative ortholog SPO3432 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="leucyl-tRNA synthetase" /translation="MSRYEASDIEARWQKAWEEAAIFQAKEDHSKPKYYVLEMFPYPS GKLHMGHVRNYTMGDVIARYKLSTGHNVLHPMGFDAFGMPAENAAMASGGHPKDWTYS NIDTMVEQMKPLGLSLDWSRMFATCDPEYYGQQQALFLDFLEKGLVYRKNAVVNWDPV DMTVLANEQVENGRGWRSGALVERRELTQWFFKISDYSDELLEALDGLENWPAKVRLM QENWIGKSRGLQFSFERTDGEEAIEVYTTRPDTLMGASFVGISPDHPIAKKLEAESQE VADFVAECRKGGTTEEAIETAEKLGYDTGLRVKHPLDPNWELPVWIANFILMDYGTGA IFACPAHDQRDFEFATKYNLPIIPVLEPVEGAGELTEAYVPTKAEKVRYVRGFAGDEL QTGEEGVNTAVDKAEAEGWGQGVTKFRLRDWGLSRQRYWGCPIPVVHCPDCGVVPEKK ENLPIALPYDEDGKAIDFSVPGNPLDRHPSWRNCACPNCGKPAQRETDTMDTFVDSSW YFARFTAPRAETPTDLDAANYWMNVDQYIGGIEHAILHLLYSRFFARAMQICGHLPES AKEPFDALFTQGMVTHAIYENAERKDDNGRAIYHYPSEVEERDGGVFVKETGERIKVI PSAKMSKSKNNVVDPLAIISTYGADTARWFVLSDSPPERDVEWTASGAEAAYKHLNRV WNLCDRIGEMDPDAKGEGDEELLREMHKAIRDVTLGVESFGFNAAIAKLYGFTNTLSK SKASAAVQKQAIKTLAQLMSPMTPHLAEDIWAHQGGEGLIANAAWPVADESMLVEDSV TLPIQVNGKRRGEITVAKDLDKAEVEKLALAHEAVQRVLEGAAPKKVIVVPGRIVNVV A" /EC_number="6.1.1.4" CDS complement(1220101..1220589) /locus_tag="Silicibacter_1165" /translation="MRGIKTFFLLSALAVTASCGAFRSLDTSTEVNDTDTIVLAGEGR EANDDKTTIWEAFGPRKSEQRVQVNRYLWAASLEVLDFLPVQSVDPFTGVIITGYGTP PGGGRAYRATIHIKDPALEARALNVALQSRGGAVSSATARAVEDAILSRARQLRMADK KI" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3431 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1220871..1221815 /locus_tag="Silicibacter_1166" /translation="MKKILFASTALVATAGVAAAELTIGGSARFGLAYDESQTEETRI EQRMRVNITGIAETDAGVKLEARFRLEANEDSHANDISGRGPGAAGFAVSYGGLRVDV GNVSNVLDSGDQVDYYGYGVGFTSFLEHNANFNGPATGFGAGSQDATTIKARYNVGDF SASLSYKETRAQAAVANAPGVLGSTAVAADEEWQLGLGYTLANGMAIGAVYSDTDSSG DYWVIGLNGTAGAVGYSVIVGDGDNQADASFGASINYEVSSATSIRAVVSDGGAANAD TSYGLGFRHGLGGGVTLAGGVGSKNDNTLADLGVSFSF" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1221934..1222590 /locus_tag="Silicibacter_1167" /function="COG: Predicted enzyme with a TIM-barrel fold" /translation="MSLSEIKSRIAAAESAAGRVPGSVELIAVSKVQPNERVEAVLEE GHRCFGENRVQEAAGKWPQFREKFTGVDLHLIGPLQTNKARQAMELVNVIHSVDRPKL ANALARLAQELGHCPDLFIQVNTGEEEQKAGILPQDADGFVAECRKLDLPIKGLMCIP PVDEEPSLHFALLAKMAERNGLNGLSMGMSGDFESAIALGATHVRVGSAIFGARAYSA " /product="alanine racemase domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3429 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1222582..1223037) /locus_tag="Silicibacter_1168" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MGRLLPCTIGKGGLSTAKREGDGATPVGTHHISGMLYRPDRISA PQDWARPILPGDLWSDDTQARDYNQMVRAPYPFSHERLRRADPLYDLVLLTDWNWPNA TSGRGSAIFLHQWRRPGYPTEGCIAFSRQNLRWIAERLRPGAQLIVGSR" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3428 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1223079..1224167) /locus_tag="Silicibacter_1169" /function="COG: GTP cyclohydrolase II" /gene="ribBA" /transl_table=11 /note="identified by match to putative ortholog SPO3427 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" /translation="MSLMPTMLERIARARVDLRMGLPVILTTGESAILAISVESLSPE RLTDLRSLGPVTLALTARRAATLKARVYDNDIARVTVPSDAGLAWVQALADPADDLET PMKGPLLSEREGDASLPRLAIAMVKSARLLPATAYVALENAGDFALKHDLTLLPQSAA EPLLNTSSPLHPVAAARLPMEASEAGRLHIFRPEDGGEEHYAIEIGRPDRSQPVLARL HSACFTGDVLGSLKCDCGPQLRGALSHMGQEGAGILLYLNQEGRGIGLANKMRAYSLQ DQGFDTVEANHRLGFEDDERDFRLGASILRELGFSSVRLMTNNPGKIAMMEKTGISVV ERVPLKVGENAFNRHYLATKAAKSGHML" /EC_number="3.5.4.25" CDS 1224337..1225023 /locus_tag="Silicibacter_1170" /function="COG: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /translation="MAQLKKILLVDDDEDLREALSEQLVMTEDFDVFEAGDGQGAMER AKEAIYDLIILDVGLPDTDGRELCRLMRKQGVKSPILMLTGHDSDADTILGLDAGAND YVTKPFKFPVLLARIRAQLRQHEQSEDAVFVLGPYTFKPAMKILITEDERKIRLTEKE TNILKFLYRSNNGVVPRDVLLHEVWGYNAGVTTHTLETHIYRLRQKIEPDPSNARLLV TESGGYRLVA" /product="DNA-binding response regulator" /transl_table=11 /note="identified by match to putative ortholog SPO3426 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1225162..1226280) /locus_tag="Silicibacter_1171" /function="COG: Probable taurine catabolism dioxygenase" /translation="MAQAALQPQNACVLLSFSDGTTAQYPYIWLRDNDPEGFHPDTQE RITDLSAISPDITVADVELNDSQLLIHWEGADSATSRFDLDWLRSYVPGTRTADPART GFQHWRCDLGAGGIPRATAQEILSSDLALRTWLEQTQIYGISIVEGLADSTEAGMDVA RRIGFLRQTNFGVTFEVKSKPNPNNLAYTPIALPLHTDLTNQELPPGFQFLHCLANEA RGGGSLFCDGYAIAEDLRRDDPESFELLSTVSVPFRFHDQDTDIRNRKKVITLDEDGR VIEICFNAHLADIFDLEPALMQRYYRAYRKFMILTRSTNYLVTLKLKGGEMVVFDNRR VLHGREAFDPQTGYRHLHGCYVDRGEFESRLRVLHRGQ" /product="butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)" /transl_table=11 /EC_number="1.14.11.1" /note=", [EC:1.14.11.1] , Trimethyllysine dioxygenase, mitochondrial precursor (EC 1.14.11.8) (Epsilon-trimethyllysine 2-oxoglutarate dioxygenase) (TML-alpha- ketoglutarate dioxygenase) (TML hydroxylase) (TML dioxygenase) (TMLD)., Gamma-butyrobetaine hydroxylase, Gamma-butyrobetaine hydroxylase, carnitine_bodg: gamma-butyrobetaine hydroxylase" /note="High confidence in function and specificity" CDS 1226497..1227387 /locus_tag="Silicibacter_1172" /function="COG: Exonuclease III" /translation="MALRLCRKPQQSHWYLPRGAGNIRPNTYHRLRARMSFTLATWNI NSVRLREPIVVKLLEEEGPDVLCLQECKSPVDKIPMEAFRALGYEHMIARGQKGYNGV AILSRLPIEDVGDKDFASLGHARHVAGRLENGVTIHNFYVPAGGDEPDREKNVKFGQK LDYLTEMRDWFHAERPEKSVLVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEHLDQVM DAGGWADVTRKDIPEGQLYSWWSYRAKDWDAADKGRRLDHVWTTADITNAAHSSRILR HARGWEKPSDHAPVFATFDL" /product="exodeoxyribonuclease III" /transl_table=11 /EC_number="3.1.11.2" /note=", [EC:3.1.11.2] , Exodeoxyribonuclease III (EC 3.1.11.2) (Exonuclease III) (EXO III) (AP endonuclease VI)., Exodeoxyribonuclease III xth, Endonuclease/Exonuclease/phosphatase family, exoDNase_III: exodeoxyribonuclease III" /note="High confidence in function and specificity" CDS 1227612..1228547 /locus_tag="Silicibacter_1173" /function="COG: Thioredoxin domain-containing protein" /translation="MMDILGGGASAAPAGDLIKDVTEETFMADVVEASMDVPVVVDFW APWCGPCKTLGPMLEAAVTKAKGAVKMAKINVDENQRLAAALAQQGLPLQSIPTVVGF YQGRPVDMFQGALPQSEIEAFLQKMAEAAGSTADGGLGEALETAEQMLEEGAAADAAQ VFAAILGEDDKNAAAYSGLARCHVAMGELDQAEAVLNGAPAEISTAAEIEAAHAQIEL ARQAENAGPVAELRAAVDANPDDHQARFDLAQALHAAGDAEAAVTELLELFRRDREWN EGAAKAQLFTIFEALKPNDPVVLNGRRKLSSMIFA" /product="thioredoxin" /transl_table=11 /note="identified by match to putative ortholog SPO3423 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1228575..1229219 /locus_tag="Silicibacter_1174" /function="COG: ATP-dependent Lon protease, bacterial type" /translation="MIKAADLPDTIPVFPLPGALLLPRAKLPLHIFEPRYLQMLEDVL KTPNRVIGMIQPSHARNADGSGLHAIGCAGRVTQFSETEDGRYFITLSGLSRFRVKEE IEGFTPYRRCAVDWAGFDMDLGPAECDDGFDRTALMGLLGRYLDARGMSTDWGALDEA GDELLVNSLSMLLDFEPEDKQALLEAPSLSTRRETLVTLMEFALRGGSLEEKLQ" /product="ATP-dependent protease La domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3422 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1229216..1229401 /locus_tag="Silicibacter_1175" /translation="MNETTPAFDRHMLEALVCPVTQTVLEYDAEAQELVSRAANLAFP IRNGIPVMLTDEARPLE" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3421 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1230682..1232202 /locus_tag="Silicibacter_1177" /function="COG: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases" /translation="MLLSCHRTEACCRSPPIAWCPSHLQCLGAPMWGRAGLCARGALA TVAANDTLPFQGTHKEAQVMQDWLTMSAAQLGRGIASGEIDPVALTEAYLTAIDSHPE TARIYTKVTHERARAEAKAAQERAKAGLRRSPLDGVPISWKDLFDSAGVETESGSDLL KGRIPDTDALVLDTATALGSVCLGKTHMSELAFSGLGLNPIKATPPCVNDPEAVPGGS SSGAAASVAFGLAAGAIGSDTGGSVRIPSAWNDLVGLKTTSGRVSLEGVVPLCLKFDT IGPLARSVEDAALMLALIEGSATAPDLEGATVEGKRFADLRTVAQDDLAPEVATAHAA ALDKLREEGAEIVPLEVPELPDAMALSAILFTTEAYGLWKDVIEASPDLMFPEILARF RSGAEFSGSDYVAAWAKLEQVRMAWDQAVAGFDAVLAPAAPILPPNLARLQSDHDYYV TSNLMALRNTRIGNLMGVCALSLPTGTPSCGLQVIGQPDCEEALLRIGAGVEAALA" /product="amidase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3418 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1229421..1230683) /locus_tag="Silicibacter_1176" /function="COG: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases" /translation="MDNPPRQRILRGMTDTRDILIVGGGLNGPSLALALAQAGHSVTL IDALPAPLREDAEFDGRSYALALASTRLLQQIGIWAVIEDHAQPMNEIKVSDGVAGRG PSPLFLHFEESDLDEGPMGYMVEDRYLRRALLKALEAEPKITQISGQPVIAQTVSADA ITVTLEDGTQLSGALLVGADGRQSGTAARAGIKRTGWDYGQTALVCAISHAQPHNGIA HQFFMPPGPLAILPLPGNRSSIVWSETHAEAARIQALSDQDYLSVLRPRFGSFLGEID LEGKRFSYPLKLSLANAFYGERLALVGDAAHGLHPIAGQGLNAGLRDIASLAEVLTDA ARRGEDLASPLVLARYQQWRRFDTTSLALATDVFNKLFSNDNPILRATRDLGLGLTNA LPGLRRGFVREAAGLSGDLPRLLRGRPL" /product="ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family" /transl_table=11 /note="identified by match to putative ortholog SPO3419 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1232311..1233489 /locus_tag="Silicibacter_1178" /function="COG: Aspartate/tyrosine/aromatic aminotransferase" /translation="MKFPERFAHLPPYAFPRLRALLDHHAPGGDVVQLTIGEPKHEFP AWVTDVIVENASAFNNYPQNEGSDALRGAMADWAAQRYGVTLDPATRVMALNGTREGL YNAAMALCPEEKNGQRPVVLIPNPFYQVYMIAAISVAAEPVFVPATDETGHLPDYASL PEEVLNRTAIAYICSPANPQGAVASREYWQQLFALAEKYDFKVFADECYSEIYRDTAP VGALTVADEMGLDPERVVLFNSLSKRSNLPGLRCGLLAGGPETLVQVKKLRAYSGAPI PGPLQAAAAKVWADEVHVAENRALYQEKYRIADEVFAGLNGYMSPEAGFFLWLPVEDG EAATLKLWQETGVRVLPGAFLAQGKGAENPGHGYIRVALVASEEQTRASLQLLRDCLY " /product="aminotransferase, classes I and II" /transl_table=11 /note="identified by match to putative ortholog SPO3417 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1233609..1236656 /locus_tag="Silicibacter_1179" /function="COG: DNA segregation ATPase FtsK/SpoIIIE and related proteins" /translation="MAFQTRSRNPLLDSNMQAAIEKRGKELIGLVLIGVGLLVAAIIG SYTPDDSNWMVSTDAPVQNWLGQTGATIAFLLITFLGKGAWAISVFLFAWGTRFLLHK GEGRILWPALMLVFWLIVVALHFETLVPDEEWRAFHNAGLGGMIGNTALGALLALLPF GLAFLVKSLSFLTAVAMIALGAFVLGFSRDELKRIGRFLLLGVLLAYDMIARLLGRGA SGGLQAARTWQQRRAERRSDAAYDDDALVYSDPVEPAAFTRAEPQFGLHAPAPTPEPH PEPATSTEDRGGLFSRATNLIRRAEPVEMPEPELVEPQPVADVEHAPGDERIAQKIAN AVRIRRAQALPPEQDPNLPLTKGRGKRPEPLIFNAPAQEATTEPPLSAPVQQIPAAPT ITSVIPQAPQVEDTVSGPNEAFFVDEVPTEDLPQDPVTSKTAAPEPAPAPAVGSAPRV QITPRVDPTPAAPVSEPRAAMAIPVAEPRKAVVEQPQRKPLQPSTRAKAEAQPNLFKE ENSDFELPPLSLLTNPTAIERHHLSDEALEENARMLETVLDDYGVKGEIVSVRPGPVV TMYELEPAPGLKASRVIGLADDIARSMSALSARVSTVPGRTVIGIELPNENREKVVLR EILASRDFGDGNQHLPLALGKDIGGDSMVANLAKMPHLLIAGTTGSGKSVAINTMILS LLYKLTPEECRLIMIDPKMLELSVYDGIPHLLSPVVTDPKKAVVALKWVVGEMEDRYR KMSKMGVRNIAGYNGRVSEALAKGEMFSRTVQTGFDDDTGEPVFETEEFEPKKLPYIV VIVDEMADLMMVAGKEIEACIQRLAQMARASGIHLIMATQRPSVDVITGTIKANFPTR ISFQVTSKVDSRTILGEMGAEQLLGMGDMLYMAGGAKITRCHGPFVSDEEVEEVVNHL KQFGPPDYVGGVVEGPDDEKADNIDAVLGLNTGGNTNGEDALYDQAVGIVIKDRKCST SYIQRKLGIGYNKAARLVEQMEEEGLVSAANHVGKREILVPEQ" /product="FtsK/SpoIIIE family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3416 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1236724..1237320 /locus_tag="Silicibacter_1180" /function="COG: Outer membrane lipoprotein-sorting protein" /translation="MKQFVFALALGATSLASAAASAAEQLSLNEISAYLNSFATAKAD FTQVNDDGSLSTGTLYLRRPGKVRFEYADNAGLVLAEAGTVAIMDPKSNQPPETYPLS RTPLSIILARNVNLAQANMVVGHGFDGVSTVVRAQDPKAPEHGSIEMMFTDNPVQLRK WVIHGGSGEETTVILGEMQTGLSFPSSLFSISRPKRDR" /product="outer membrane lipoprotein carrier protein LolA, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3415 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1237379..1238149) /locus_tag="Silicibacter_1181" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MSNLGSEFLQKQSVRPYLTVRQTDIFKRLSQVPRETWSDFKRDF LCQADWLNCSKNQKAEAMSRIISALALLLALAACGGGYNSPPRDLDDACSIVTERPNY LRAFKNTERRWGIPVHVQMATIHQESRFVGNARTPHRFALGIIPMGRISSAYGYGQAL DGTWEDYKDDTGRRRARRDRIEDATDFMGWYMTRSLQRNGIPLSDARNQYLAYHEGHT GYARGTYRSKGWLLNVANKVEARSNAYQVQLSNCRKFR" /product="lipoprotein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3414 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1238197..1238523 /locus_tag="Silicibacter_1182" /function="COG: Uncharacterized conserved protein" /translation="MLKTRAKYNLGQVVRHRKHPFRGVVFDVDPEFANTEEWYEAIPE DSRPAKEQPYYHLLAENEQTYYVAYVSEQNLVADYSGEPVTHPDLHEMFTGFDDGNYQ LQYQLN" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3412 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1238561..1240138) /locus_tag="Silicibacter_1183" /function="COG: Gamma-glutamyltransferase" /translation="MRDFQTPGRSAVFAQNGLCATSHPLAAQVAVDVLKRGGNAMDAA IAGAVLLGICEPQMTGIGGDCFVLYNRAGETTVRALNGSGRAPKAAQAADLRARGLEA VPLNSADAVTVPGAIDAFCHLSETEGKLGLDALLAPSIHYAEEGVPVAPRVAFDWGND AETLQGSARDTYLINGRVPRVGEIFRAPGQAEVLRRIARDGRDAFYSGEIAEDMISAL TTRGGVHTAEDFAATQATATDPIQGHYKGVDLLEHPPNGQGATAILMLNILKHFDIAG MDPFGAARAHIEAEAAKLAYDTRNRFLADPDHMSRLDYMLAPETAEKLAALIDPKRAM ASPADISEAVHKDTIYITVVDKDRMAVSLIYSIFHGFGSGIASDKFGILLQNRGAGFC LEDGHANELAGGKRPMHTIIPAMLAENGRITMPFGVMGGAYQPNGHARFVSNLRDFGM EPQAAMDAPRAFTDRGVFNVERGYSDAVRAELTEMGHKVDIPTTAIGGSQAIHIHDTG VLEGASDPRKDGCALGY" /product="gamma-glutamyltranspeptidase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3411 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1240446..1240886) /locus_tag="Silicibacter_1184" /function="COG: Anti-sigma regulatory factor (Ser/Thr protein kinase)" /translation="MVETFACSFRATEIEARRGIVLVVQRLKDMGIADTRVDEVQIAL AEAVNNVVEHAYAETATGDVLIRCNLHSDRLWVEIRDAGTPFPDAKLPEGKPALVDPS TPLEDLPEGGFGWFLIRELASDIQYQRNPDNNQLSLCFEIQLTQ" /product="anti-sigma B factor, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3410 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1240920..1241264) /locus_tag="Silicibacter_1185" /function="COG: Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)" /translation="MSLTSTEAGGAQVVTVNAQRIDAAMAIQFKEDMRTETEAGPSRV ILDLSHVEFIDSSGLGAIVAAMKQLGKDRKLDLAGLTPMVDKVFRLTRMDTVFSLFDT LQEALDTEHAEN" /product="anti-anti-sigma factor" /transl_table=11 /note="identified by match to putative ortholog SPO3409 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1241362..1242534 /locus_tag="Silicibacter_1186" /function="COG: Acetyl-CoA acetyltransferase" /translation="MTKIVIAGAARTPMGGFQGMYDGVSAADLGGAAIKAALERAGAT TVDEVLMGCVLPAGQGQAPARQAGFAAGLGEEVPATTLNKMCGSGMKAAMVAYDQIAL GHSDVMVAGGMESMTNAPYLLPKMRGGARIGHGQVIDHMFLDGLEDAYDKGRLMGTFA EDCAEHYQFSREEQDAFALGSLSNALAAQESGAFEGEITEVTVKTRKGAVVTDADEQP KSARPDKIPTLKPAFREGGTVTAANSSSISDGAAALVLASETAAAARGLSVRGHILGH ASHAQAPGWFTTAPVPAARKLMAQIGWDVEDVDLWEVNEAFAVVPMAFMREMGIPREK VNVNGGACALGHPIGASGARIMVTLLNALEKRGLKRGIAAICIGGGEGTAIAIERA" /product="acetyl-CoA C-acetyltransferase" /transl_table=11 /note="identified by match to putative ortholog SPO3408 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1242634..1243101 /locus_tag="Silicibacter_1187" /function="COG: GAF domain-containing protein" /translation="MRVNYEDLSKVVAALTEGETDEVALMATVVCELHHADDRFDWTG FYRVTEPEVLKIGPYQGGHGCLVIPFARGVCGAAARLNETQLVDDVDAFPGHIACSSS TRSEIVLPVRNRAGEVIGVLDIDSNQPAAFDRDDQDALETLLHAVFGRLPLQS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3405 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1243117..1243746 /locus_tag="Silicibacter_1188" /function="COG: Putative threonine efflux protein" /translation="MSFDAWIIFTLFWIAFVTTPGPNAVNCISNGMNLGFAKAMLGVL AILTQACAFLILSALGVTALIAASPTAFFIAKLVGAGFLIALGIRGWRNATKPAPAAA RPARHVYVHALAVATINPKSVAGYLAAFSQFVQPDVPIWSQMLVIMPTALTLTALSYA GFTLLGALMGRAALAAVFNVWIRRLLGVCFIIYGVLLGLSSAPTPTAAP" /product="transporter, LysE family" /transl_table=11 /note="identified by match to putative ortholog SPO3402 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1243774..1244145 /locus_tag="Silicibacter_1189" /function="COG: Uncharacterized conserved protein" /translation="MIKGHCLCGQIQFETTARPEASSMCHCSQCRRQSGGIWSSAHVT QDALHITGDVSWYNASPEAKRGFCATCGSFLFWKRSDEDTISFSLGAIDNPTGLKLEK HIFVAEKGDYYDIADGVTQQS" /product="hypothetical protein" /transl_table=11 /note=", Glutathione-dependent formaldehyde-activating, GFA, Protein of unknown function (DUF636)" /note="Hypothetical protein" CDS 1244297..1245232 /locus_tag="Silicibacter_1190" /function="COG: Predicted permeases" /gene="rarD-2" /translation="MSTKPENVDTPQGLSFALTAYIMWGFLPLYMKMLAHIPPTEVVA HRVIWSVPIAGVLLLALGRMGDLKAALRSPRVLGMGCVTAAFVSINWGIYVWSVGAGY ALEAALGYYINPLFSIALGALLLGERLTRAQMVAVGLATLAVVILTVEAGRLPLAALG LTFSWGFYAFFKKSLPIGPNQGFLLEVLILTIPAIGYIAYLTTTGQSHFASVRFDTLL LLGCGVVTAVPLIIYANGAKLLKLSTIAILQYIAPTMIFLVAVFVFKEPFGGARMVAF PLIWAALVIYSTSLLREMRRKGRQALTDAAPPREA" /product="RarD" /transl_table=11 /note="identified by match to putative ortholog SPO3395 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1245306..1245959 /locus_tag="Silicibacter_1191" /function="COG: Pseudouridylate synthases, 23S RNA-specific" /gene="rluA" /transl_table=11 /note="identified by match to putative ortholog SPO3392 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ribosomal large subunit pseudouridine synthase A" /translation="MTVSSEYCPPSDPLDILHHDAQLLVVNKPAGLLSVPGKGAHLAD CLIARIQAAFPEALLVHRLDRDTSGVMVFAMTPHAQRHLGLQFEKRMTKKAYVARLTG RLEPRSGTVDLPLIVDWPNRPLQKVCHETGKPAHTDWKVISYGENETRVRLSPKTGRS HQLRVHMQSLGHPILGDPLYASGAALEHPRMMLHSEELRLKHPEGGASQKFRVKAPF" /EC_number="4.2.1.70" CDS complement(1245943..1246656) /locus_tag="Silicibacter_1192" /function="COG: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain" /translation="MDFRAALGLRVASDAPPDDIRRAIARSDTAVVRSLCLVPDPGVI CGKFLRLQRYCALEIRMAVQDVGDRSLRLAIDPAASQDRVEEQLIILHALMERAGLQV RTSRQGVIHWQDAPPLPEVDTGTSQRLTDHLHHLIASDPARAWRIEETAAWLGLSTRS LQRYLLAEGGRFSATLRHMRTSLASDMLRNSDQSLGEIGFCCGYADQAHFQREFRKVS GQTPRRFRSQPRESVKTAL" /product="Xylose operon regulatory protein." /transl_table=11 /note=", Helix-turn-helix, AraC type" /note="Conserved hypothetical protein" CDS complement(1246798..1248240) /locus_tag="Silicibacter_1193" /function="COG: NAD-dependent aldehyde dehydrogenases" /translation="MLEKREFYINGQWVEPSAANDCAVIDPSTEEPCTVISLGSQADT DAAVAAAKAALPGWMATPPAERIALVEKLVEIYNSRAEDLAQAMSSEMGAPIDMSRSS QVGAGSWHLNGFIEAAKNFQFERPLGDHAPNDRIIYEAVGVAALITPWNWPMNQITLK FGAAAIAGCTMVLKPSEQSPLNAMIFAELVHEAGFPPGVFNLVNGDGAGVGTQLSSHP DVDMVSFTGSTRAGTAISKAAADTLKKVHLELGGKGANLVFEDADEKAVKRGVLHMMQ NTGQSCNAPSRMLVQKSIYDRVVEEAAAVANKVEVGPASQEGRHIGPVVNELQWTKIQ DLIQKGIDEGARLVAGGTGRPDGLNKGYYVKPTVFADVNNQMTIAREEIFGPVMAIIP FETEEEAVEIANDTPYGLTNYVQTQDGARANRLARVLRSGMVEMNGKSRSAGSPFGGM KQSGNGREGGVWGLEDFMEVKAVGGWTPDA" /product="aldehyde dehydrogenase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3382 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1248486..1249136 /locus_tag="Silicibacter_1194" /function="COG: Peroxiredoxin" /translation="MGLRINDVVPNFTAETDQGTITFHDWIGDSWAILFSHPKDFTPV CTTEFSAVAQLSEEWAKRNTKVIGVSVDGVEDHKKWKGDIESYGNAPAGFPIIADEGL AVSKAFDMLPAEAYLPDGRTPADSATVRSVFIIGPDKQLKLSMTYPMTVGRNFAEILR ALDGLQMSGKGVATPANWVPGEDVIIPPTVSNEDAKAKFGEFETIFPYLRKTKAPE" /product="thiol-specific antioxidant protein" /transl_table=11 /note="identified by match to putative ortholog SPO3383 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1249219..1250376) /locus_tag="Silicibacter_1195" /translation="MSLPLWKIKRELKRQGRQLKNIGPRLASLLFSRTYYDLFLSGKK TVTEGQIPKRPKVAVYLIFPSSGILGSHIEALRYLAQNGYAPVVVSNLPLDEGDLEHL RAHAHLVIQRPNYGYDFGGYRDGVLEVAARHTSVERFVLLNDSAWFPLPGSRNWLADA EALELDFAGAATNYGHTRVDPKNFRDIRWHYSSNHRNFHYCSFALMMSGKLFNDKRFQ RFWKSFPLTNDKTVTVRRGEIGLTKWVIQQGFSHGSTLDIAALDQRLAEYGIDELRAI AAQTLMPQSPSMKEVLEDTVRSAESKEDLVNVILTAIARKGISYAQPRLIHRDYGFAF LKKSPLWLDEDASNLTLAFTRDLDGEFGKVLQAEALDLRRTRAAEFAPAPD" /product="Hypothetical 45.0 kDa protein y4gN." /transl_table=11 /note="Conserved hypothetical protein" CDS complement(1250447..1251310) /locus_tag="Silicibacter_1196" /function="COG: Predicted glycosyltransferases" /translation="MTRVTLVTVAYNSAAVLPTLLASIPAGVDCIVVDNGSKDPGEIR DLAQAHGAEFIASERNIGFGRGCNLGAARATMEFLFFVNPDAQLAPGAIEALLAAADA HPDACAFNPRLREGNGKVAFKRRSKLLPKAQWLPREAADADCELPVLQGSAIFVRRAA FEAVKGFDPKIFLYHEDDDLSLRLKADCGPLRLVTGAEVVHLFGESTARSPRTAALKA WYMGQSRVYACRKHGMPNAFGNALIEALSKLLSPLTLLSARKRAKHLAFLRGVLAARQ CADALKPFDAR" /product="Putative polypeptide N-acetylgalactosaminyltransferase-like protein 1" /transl_table=11 /EC_number="2.4.1.41" /note=", Putative polypeptide N-acetylgalactosaminyltransferase-like protein 1 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase-like protein 1) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase- like protein 1) (Polypeptide GalNAc transferase-like protein 1) (GalNAc-T-like protein 1) (pp-GaNTase-like protein 1)., Glycosyl transferase, family 2, Glycosyl transferase" /note="High confidence in function and specificity" CDS complement(1251412..1253547) /locus_tag="Silicibacter_1197" /function="COG: Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)" /gene="pnp" /transl_table=11 /note="identified by match to putative ortholog SPO3389 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="polyribonucleotide nucleotidyltransferase" /translation="MFNVTTKTMQWGEETLTLETGKVARQADGTVIATLGETSVMANV TYAREQKPGQDFFPLTVHYQEKYYAAGKIPGGFFKREARPTEKETLTARLIDRPIRPL FVPGFKNEVLVMCTVLSHDLVNDPDIVAMIAASAALTISGVPFMGPIAGARVGYEDGE YILNPTVDDMQDLRLNPEQRLDLVVAGTKDAVMMVESEAYELTEEEMLGAVTFAHEQI QPVIDLIVSLAEETAKEPFDFTPPDYSDLYAAVKAAGEEKMRAAYAISDKQERVAAVG AAKEEIIASLTEEQQEDGNLGSALKKLESVVLRGDVVKNGRRIDGRALDQVRAIECQT GLLPRTHGSALFTRGETQGLVVTTLGTGDDEQFIDALHGNFKSNFLLHYNFPPYSVGE VGRVGSPGRREIGHGKLAWRALQAVLPAPTDFPYTIRVVSEITESNGSSSMASVCGGS LSMMDAGVPLKAPVAGVAMGLVLEEDGSYGILTDILGDEDHLGDMDFKVAGTEAGITS LQMDIKVAGITPEIMKNALAQAKAGRLHILGEMAKSLTEASEFSQHAPRIETMQVPTD KIREVIGSGGKVIREIVEVSGAKVDINDDGVIKIASANGEAIQKAYDMIHAIVAEPEE GAVYTGKVVKIVDFGAFVNFFGKRDGLVHVSQIENRRLNHPSDVLKEGQEVKVKLLGF DDRGKVRLSMKVVDQETGEEIVAEKKEAE" /EC_number="2.7.7.8" CDS complement(1254004..1255218) /locus_tag="Silicibacter_1198" /function="COG: Putative GTPases (G3E family)" /gene="cobS" /transl_table=11 /note=", Cobalamin synthesis protein/P47K, CobW/HypB/UreG, nucleotide-binding domain, CobW: cobalamin biosynthesis protein CobW" /note="High confidence in function and specificity" /product="conserved hypothetical protein" /translation="MSDPRLPVTVLSGFLGAGKTTLLNRILNNREGRRVAVIVNDMSE VNIDADLVREGGADLSQTEETLVEMSNGCICCTLRDDLLAEVRRLAAENRFDYLLIES TGISEPLPVAATFDFRDAEGESLSDVARLDTMVTVVDAVNLLNDFASHDLLADRGETL GEEDERTLVHLLTDQIEFADVVVLNKVSLASAEQVDAARKIIRSLNADAEIIETDFSE VSADKILDTKLFDFEKAHEHPMWAKELYGFADHVPETEEYGIASFVYRARAPFDPSKL HVVLNGNLPGVIRAKGHFWVATRPEWVAEFSLAGALSSVAPLGTWWASVPAERWPTHQ QARDYIQTHWQEPFGDRRQELVFIGAGIDWPALKATLDACLIPEATAETLQDYADLDD PFPLWRRADQAA" /EC_number="2.-.-.-" CDS complement(1255382..1255651) /locus_tag="Silicibacter_1199" /function="COG: Ribosomal protein S15P/S13E" /gene="rpsO" /translation="MSITAEEKTRLMKEFATKEGDTGSPEVQVAILTSRINTLTEHFK THKKDNHGRRGLLKMVAQRRKLLDYLKGKEEARYQDLIKKLGIRR" /product="ribosomal protein S15" /transl_table=11 /note="identified by match to putative ortholog SPO3840 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1255916..1256983) /locus_tag="Silicibacter_1200" /function="COG: RTX toxins and related Ca2+-binding proteins" /translation="MLWLASILGMVAVGSAIMIDFESDDADSDETNPDAEADGTGSTI VSPDEFLTGVDPAGNDASDTTETDESPQVADGDDTDERNIILGTEDLDQLSGGATDDE ISGLGGDDQINGYDGNDYLSGGAGADDLYGAAGEDTLHGDAGDDHLDGGEGQDSLSGG DGADSLLGGLEADSLQGDAGDDTLHGGSGADVVAGGAGSDAVHGNDDDDRVFGGAGED TLFGGRGNDVVTGADDDAERDFINGGDGDDTLIAGASDYVTGGDGADQILLGDWIAQG TVELVDFNSAEDQLLLIYDSAQGLPELELEPDPDTPGQTLVRLDGEIAMRLTGAETLT ADEILLVEAEAGDVAHLPLPE" /product="Leukotoxin." /transl_table=11 /note=", Serralysin-like metalloprotease, C-terminal" /note="Conserved hypothetical protein" CDS complement(1257087..1257608) /locus_tag="Silicibacter_1201" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MITRHHVKGDAPSTALYSDCETYRYSLTRIWEPQGQKVMFVMLN PSKATEVQNDPTIERCERRARALGFGGFQATNIFAYRATDPRDMRAAADPEGADNMSV LQAGLDWADMVICAWGTHGAHRNQGPRVAAALRASGRPLHHLGLSKAGHPKHPLYIPY AQQPLLWRQDIEP" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3838 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1257837..1258745) /locus_tag="Silicibacter_1202" /function="COG: Pseudouridine synthase" /gene="truB" /transl_table=11 /note="identified by match to putative ortholog SPO3837 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="tRNA pseudouridine synthase B" /translation="MGRKRKGRDISGWLVVDKPAGLTSTAVVNKVRWAFDAKKAGHAG TLDPEATGVLAVALGEATKTVPFITDAMKAYTFTVTLGAATNTDDAEGEVIATSAERP TDDDIKEALLGFIGEIQQVPPKFSAVKIDGQRAYKLARDGEEVELSARPLWVEELVML DRPDADHVVLEMTCGKGGYVRSIARDLGEKLGCLGHVRELRRIWSGPFDAEDGVTLEQ IDALAKSPEIDQFLRPLEEGLADLPELKCTPQGATRLRNGNPGMVIASDVEYGEEAWA SLEGKAVAVGTFKAGELHPSRVFNQD" /EC_number="4.2.1.70" CDS complement(1258803..1259576) /locus_tag="Silicibacter_1203" /function="COG: Predicted periplasmic protein" /translation="MWRALLWGLPLGIVLWSGQASAVECQDLAYEGNRYALCEVDASR EELRLFLRDDTGAVMGHFSTIEDRLEAEGKTLAFATNAGMYHSDRSPVGLYVEDGSQE MRLVTNPGPGNFGLVPNGVFCLREGRADVIETLAFEASGTTCKSATQSGPMLVIDGEL HPRFLKDSDSRYIRNGVGTSADGRRVVFAISRNTVNFHDFAGLFRDHLQLPQALYFDG NISRLHAPDLQRSDAGFMMGPVVGVIEDRDTNEGDTLQN" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3836 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1259581..1259976) /locus_tag="Silicibacter_1204" /function="COG: Ribosome-binding factor A" /gene="rbfA" /translation="MAKNKFHDGPGPSQRQLRVGEVIRRTLSEVLARGDIHDPELNRL SITVGEVRTSPDLKIATAYVLPLGGKGQEDVLQLLARNKSELRRAIGKKTGLKFTPDL RFQIDETFDRMDDTRRLFNQDAVRRDLED" /product="ribosome-binding factor A" /transl_table=11 /note="identified by match to putative ortholog SPO3835 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1260070..1260879 /locus_tag="Silicibacter_1205" /function="COG: Dihydrodipicolinate reductase" /gene="dapB" /transl_table=11 /note=", [EC:1.3.1.26] , Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR)., Dihydrodipicolinate reductase, bacterial, Dihydrodipicolinate reductase, C-terminus, dapB: dihydrodipicolinate reductase" /note="High confidence in function and specificity" /product="dihydrodipicolinate reductase" /translation="MTDKPGIVITGASGRMGQMLIKTVLDSDKAELAGVVEREGHDWV GQDIGIAMGGAALGVVVTDDAGSAFAGAQAVIDFTAPQATIAFSKLAAEAGCVHVIGT TGMSEAEIAQLDPAAQDTVLVRAGNMSLGVNLLVQLTKKVAAALDEDFDIEVIEAHHH HKVDAPSGTALMLGEAAAEGRGVALAEVSDRGRDGITGARKKGDIGFSAIRGGDIVGE HDVLFAAAGERIVLRHMATDRAIFARGALKAALWGQGKDAGAYDMIDVLGL" /EC_number="1.3.1.26" CDS complement(1261074..1261268) /locus_tag="Silicibacter_1206" /translation="MSDTPESNRAKDLPAAAQRALAEAEERRKARDAEKPLPTELGGR DGPDPARYGDWEKKGIAIDF" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3377 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1261367..1262641 /locus_tag="Silicibacter_1207" /function="COG: tRNA and rRNA cytosine-C5-methylases" /translation="MTDHPSSASDARRAAVALLDKVLGEGLLLSECQTQILERLEPAD RARAQRLALQVLRALERADRVLAKHLRKPPALHVRNALRLGTVELCSGGAAHGVVNDI VNLVARHRRHGQLKGLVNAVLRKVATEGPGEWAKLRVPRLPKWLRAPLVQAWGSDAML AIEAAHFKGAPLDLSAKPGADLAALEGAMTPTGSLRLQDAGQVSALPGYEQGAWWVQD AAAALPAQLLNAARGERVLDLCAAPGGKTLQMAAAGAQVTAVDISENRLARLQENLTR TGLSATVVAGDVFEQKGQYDAVLLDAPCSATGTIRRHPDLPHAKDGAGFGGLIELQAQ MLAHAWGLVRPGGRLVYCTCSLLPDEGECQVEDMLEMFPGARIGDRLKSLSGIDPSWI TEEGGLRLRPDYWAEIGGMDGFYMAELVKAEV" /product="ribosomal RNA small subunit methyltransferase B, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3376 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1262833..1264578 /locus_tag="Silicibacter_1208" /translation="MSKYDRMASRGTRLLNRYTAWKARKQPAATGFVSQPEPRTIGSF ARGRQLVAGNLLFAGYLVESDTTGLWDVEAPDFAFEAERQGCTWLDDLAAVGDLKARS KAQHWVRGWIDEFGKGTGPGWSPDLTGRRVIRWINHALFLLSGQDKPASDAFYRSLSQ QTWFLSQRWKGASPGLPRFEALTGLIYAGLALKGCEELADPAVKALAQDCAQQINAEG GLPTRNPEELLDVFTLLTWAAAALHEAGRSVPREHHAALDRIAPTLRALRHSDGALAR FHGGGRGQEGWLDHALAASHVPARPFEGLAMGFARLSARRTSLIIDATVPPVGKASYN AHASTLAFELTSGRRPLIVNCGAGENFGLEWRRAGRATPSHSALCIEGHSSARLAAPQ KGTGHEFLIDAPTDVPIEREDLVDGYRFQGAHDGYAKSYGVTIARSLELSVDGRMVSG EDMVLALDDAAKKCFDRALDAGGLRGIGYDLRFHLHPDVDAALDLGGAAVSMALKSGE IWVFRHDGQCDLKLETSVYLEKARLKPRQSLQIVLSGRAIQYATQIRWTLSKAQETAV AVRDLARDDPMAYEE" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3375 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1264603..1266192 /locus_tag="Silicibacter_1209" /function="COG: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)" /gene="purH" /translation="MTDLHPVRRALLSVSDKTGLIELGKSLAERGVELLSTGGTAKAL RDAGLTVKDVSEVTGFPEMMDGRVKTLHPMVHGGLLALRDNDAHVAAMTDHGIGEIDL LVVNLYPFEAALKRGAAYDEMIENIDIGGPAMIRAAAKNHAFVNVVVDVEDYGVLLEE LDQNDGQTSFAFRQWLAQNAYARTAAYDAAVSNWMAGAIGLDAPRRRAFAGQIAQTLR YGENPHQDAAFYTDGTERVGVATAEQLQGKELSYNNINDTDAAFELVSEFAPEDGPAV AIIKHANPCGVARGATLLEAYNKAFDCDRTSAFGGIVALNMPLDAETAEAITQIFTEV VIAPGASDEAKAIFAAKKNLRLLITEGLPNPQDAGLTTRQVSGGMLVQDKDVGHRAMD DLKVVTEKAPTEEQMADLLFAWKVAKHVKSNAIVYVKDGQTVGVGAGQMSRVDSATIA GVKAQRMADAMELPESLAKGSAVASDAFFPFADGLMEAASNGATCVIQPGGSMRDDEV IKAANDAGLAMVFTGMRHFRH" /product="bifunctional purine biosynthesis protein PurH" /transl_table=11 /note="identified by match to putative ortholog SPO3374 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1266212..1266694 /locus_tag="Silicibacter_1210" /function="COG: Lipoprotein signal peptidase" /gene="lspA" /transl_table=11 /note=", [EC:3.4.23.36], Lipoprotein signal peptidase (EC 3.4.23.36) (Prolipoprotein signal peptidase) (Signal peptidase II) (SPase II)., Peptidase A8, signal peptidase II, Signal peptidase (SPase) II, lspA: lipoprotein signal peptidase" /note="High confidence in function and specificity" /product="lipoprotein signal peptidase" /translation="MRSYALYLAALIALIVDQATKIGVVFGLDLVRVLRIDVAPPLLN FRYGENRGINFGLFNDGGDSSRWILIGISLIICAAVFLWVRRSHANSRLMLISAGLVI GGALGNVLDRVLYGYVLDFLNMSCCGINNPYVFNVADVFIFAGAAGLILFEGRAKKPA " /EC_number="3.4.23.36" CDS 1266847..1267353 /locus_tag="Silicibacter_1211" /translation="MRFVTAPIILSSVLLLGACANKPLHDLDARRNSPDEFLVLPSKP LEQPESYAALPEPTPGGSNRTDRNPQAEAIVALGGRPSGAGIPASEGTLVAAASRYGV EGDIRETLTAEDTKRRKRAGILANIKLFPVDRYAETYEDDALDPQRVSAAYRRAGVPT PSSPPNGE" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3372 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1267487..1268920 /locus_tag="Silicibacter_1212" /function="COG: Predicted Zn-dependent peptidases" /translation="MTTEAAILSGLRASWRSALCAVVMATGLGAPGLMAQETSVDGAG AAQTSQSGAEMVTTFTLENGMMVVVVEDHRAPVVQHMVWYRAGSADEPVGQSGVAHFL EHLLFKGTDTLEAGELSATVARNGGRDNAFTSYDYTAYFQRVAADRLELMMQMEADRM RNLRLTETDIVTEREVILEERNQRTDNDPTALFREQMRAVQYLNHRYGQPVIGWRHEM ETLSMEDALSYYGTYYAPNNAILVVSGDVQPEAVRKLAETYYGVIPANPDLPERLRSE EPPQTAARRLTFADPRVSQPYVQRSYLAPERDSGSQEKAAALYLLSQLLGGGSTSYLA NALQFEQQVAVYTAAFYSGVSLDDTTFDFVIVPADGVTLDEAEAALDRSVAQFLEAGV DTAQLDRIKLQLRASEIYARDDVDRIANRYGRALTSGLTVEDVQDWPRVLQSITEDEI IAVAREVLRPQASVTGYLIQSPQEVAQ" /product="peptidase, M16 family" /transl_table=11 /note="identified by match to putative ortholog SPO3371 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1268917..1270290 /locus_tag="Silicibacter_1213" /function="COG: Predicted Zn-dependent peptidases" /translation="MSRFKTARRARAFDMRPVKRALMALCLGFALMFAAQMARAEIDI KEVTSPGGIKAWLVEDHSIPFAALELRFRGGTSLDAPGKRGAVHLMGGLLEEGAGELR AQDYARALEALAADFSYDADKDTVSISASFLSENRDDVMELLRQTIQEPRFDQDALDR VRAQVLVGLRSDQTDPNAIAGKTFAQQAFGDHPYGSDGKGTIESVSALTRQDMFAAHE AVFARDRLYVSAVGDITPEALGALLDELLGDLPAEGAPMPGPAEVLLTGGTTVVPFAT PQSVALFGQKGMDRNDPDFFAAYVLNQILGGGSFETRLMQEVRTKRGLTYGVYSYLVP RDLAATYMGSFASANEKMAEAVGVVRDQWQALVESGVTEAELQDAKTYLTGAYPLRFN GNSQIASILVAMQMDGLSTDYVVTRNQKVEAVTLEDVNRVAKELLDPEGLRFVVVGEP EGLSSTD" /product="peptidase, M16 family" /transl_table=11 /note="identified by match to putative ortholog SPO3370 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1270395..1272737) /locus_tag="Silicibacter_1214" /function="COG: NAD-dependent aldehyde dehydrogenases" /translation="MTIKEIFETMDYGPAPENAAEALAWLVDQGSQFGHFINGDFTAP GTVFESKNPATGEVLAELTQATQKDIDAAVKAARAAQEGWAAMGGSGRATYLYAIARL LQKHSRLFAVLETLDNGKPIRESRDIDVPLVQRHFYHHAGHAQLMDDEMSDRAALGVC GQIIPWNFPLLMLAWKVAPALAMGNTVVLKPAEYTSLTALLFADICRQAGLPKGVVNI VTGDGAVGEMIVNAEVDKIAFTGSTSVGRKIREATAGSGKALTLELGGKSPYIVFDDA DLDSAIEGLVDAIWFNQGQVCCAGSRLLVQEGVSERFHQKLRARMKTLRLGDPLDKCI DIGAVVDPVQHAEISRLVASATNCTVHQSAVNMPAKGCFFPPTLIEGLSPSDPLMQEE IFGPVLVSTTFRTPAEAVELANNTRYGLAATLWTENVNLALDVAPKLVAGVVWVNGTN MFDAAAPFGGVRESGFGREGGVEGLMAYTKPKAQSEALQPVVAFEGNAKSATPEGIDR TAKMFVGGKQARPDSGYSKPVYGPKGDLLGHVGLGSRKDVRNAVEAANAAKGWAKTTG HLRAQILYYLAENLAARAGEFAARIDAMTGKGEGAAEVEASLQRLFSAAAWADKYDGL AHGVPIRGVALGMKEPVGTIGVLCADEAPLLGLVSAMAPAIAMGNRVVLAASEAFPLA ATDLYQVLETSDVPAGVVNILTGPHKDLGDTMAKHLDIDAVWSFSSSDLSKMIEAASA GNLKRTWVNNGHAFDWSRDQSKRFLQAATEVKTVWIPYGE" /product="aldehyde dehydrogenase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3368 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1272748..1273803) /locus_tag="Silicibacter_1215" /function="COG: Deoxyribose-phosphate aldolase" /gene="deoC" /transl_table=11 /note="identified by match to putative ortholog SPO3367 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="deoxyribose-phosphate aldolase" /translation="MDSQTAEDGTQPPKTSAAKPSAKAKPTAAATQDHEHSDLPRNPG IALDLDWALSLEANTSAIERRCASLPGRRSVKKDYQAAWLLKAISLIDLTTLSGDDTE ARVRRLCAKARQPVRADILSALGIDGITTGAVCVYHDMIPAAVRALHGTHIPVAAVST GFPAGLSPFHLRLEEIRESVRAGAKEIDIVISRRHVLSGDWQALYDEMKAFREACGDA HVKAILATGELGTLRNVARASMICMMAGADFIKTSTGKESVNATLPVSLVMIRAIREY YERTGFHVGYKPAGGISKAKDALVYLSLMKEELGNRWLQPDLFRFGASSLLGDIERQL EHHVTGAYSAGYRHPMA" /EC_number="4.1.2.4" CDS 1274014..1274976 /locus_tag="Silicibacter_1216" /function="COG: ABC-type metal ion transport system, periplasmic component/surface adhesin" /translation="MLNRRHTLLGLGAVAALAATPVVATEGRLDVVATTGMIADAARQ IGGADVEVTALMGAGVDPHAYRQTRSDIAAMTRADLVLWHGLYLEAQMEDFFHGLARK REVVAVAEAMPKDLLRGHDDYADKFDPHVWMSPELWKHVVREVARALTAARPALADRF AANLERHLGELDRLSDYGRRVVSGVPQENRVLVTAHDAFGYFGRDYGFEVMGLQGIST QSEAGLNRIGALVDTLVERQIKAVFVETSVADRSMRALIEGAAAKGHAVAIGGELFSD AMGADGTYEATYVGMLDHNFTTIAGALGAEVPGAGMDGKLGAGH" /product="zinc/manganese/iron ABC transporter, periplasmic zinc/manganese/iron-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3366 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1274976..1275782 /locus_tag="Silicibacter_1217" /function="COG: ABC-type spermidine/putrescine transport systems, ATPase components" /translation="MMQLSLASHNGQTAPDTQWDQSPLAIRGLTVSYGEKPAVFSVDM TVEPGQMTAIIGPNGAGKSTLLKAALGIVPPVSGRVQVFGRPLDHQRARIAYVPQRAS VDWDFPTRVIDVVMMGLYRELGLLGRIRGTHHKIARDCLERVGMSEFATRQIGQLSGG QQQRVFLARALAQGADLYLLDEPFAGVDAATEKAIIGVLKALRAEGKTVVVVHHDLAT VGDYFDNVFLINTRKVAEGPVAEAFTAENLQTAYGGRLATAQIEQIARPL" /product="zinc/manganese/iron ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3365 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1275814..1277016 /locus_tag="Silicibacter_1218" /function="COG: ABC-type Mn2+/Zn2+ transport systems, permease components" /translation="MLIDALFLQLGYNATLVAIGAALLGAASGITGTFLFLRKRALVS DAVSHATLPGVCVAFLILVALGGDGRSLAALLVGSAVSAGIGLWCMNWLTRNTRLAED AAIGAVLSVFFGFGVVLLTVIQTLGVGRQAGLEGFLLGSTAGMLYSDALVIASGGAAV LLVILLTRRPMTMVAFDPEYAAARGLPVDKIDLLMMGLVMAVTVVGLKVVGLILIVAL LIIPPVTARFWTERADYVVILAGGLGAVAAYLGAVVSALAPNLPTGPIIVLMSFALFA LSLLVAPNRGVLAAVLRHRRFQRRVHIRQGLLALAQAQTIYEPLTLRLLSRAGLVRAD GVATKAGQARAAKALRDERRWDILRRDQAQEAAAALYDGLREIETVLTPDQIAEIDRK IGTPREAF" /product="zinc/manganese/iron ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO3364 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1277017..1277943 /locus_tag="Silicibacter_1219" /function="COG: ABC-type Mn2+/Zn2+ transport systems, permease components" /translation="MGSEFVTLSLTPLLIGIFAAVACALPGNFLLLRKQALIGDAISH VALPGIVVAFLLTGAISTWPMMLGAAGAAVVAVVMIEGIRRLGRIEPGAAMGVVFTTL FAAGVLLLEQSDTSSVHLDVEHALYGNLESLIWLDGTGWGSLLDPEALAYLPVELPRM AATLVVVAGFIALFWRPLNISTFDEGFARTMGLRTDLLGLALVIMAAIAAVAAFDAVG SIIVIAMFICPPAAARMMTNRLEIQIAWSVVFATLSAILGYVLAGYGPLWIGMNDAVS AAGMIATVSGVILALAALFGPCRTRAGAPSGV" /product="zinc/manganese/iron ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO3363 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1277971..1279968 /locus_tag="Silicibacter_1220" /function="COG: DNA mismatch repair enzyme (predicted ATPase)" /gene="mutL" /translation="MAIRTRIAGGRIAGWHAKSCGMATLDPQISEKPPIEAPAKPARP VIRQLDDGAINRIAAGEVVERPASAVKELVENAIDAGATRITVEIADGGKTLIRVIDN GCGMTPEDLPLALSRHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLAITSRAEGHD AAQIRVSGGHMEPVRPAALRQGSIVELRDLFFATPARLKFMRTDRAEMQAISDTVKRL AMAEPSVGFTLRDVSGGGEGRVTFRADPMNGDLFDALHGRLAHVIGREFAENALKIDA TREGIRLYGYAALPTYSRGAAVTQFLFVNARPVKDKMLTGALRAAYMDFLSRDRHPAA ALFIDCDPTLVDVNVHPAKSEVRFRDPGLARGLIVSALRHALAEAGHRASSTVAGATL GAMRPEQPTATGAPRVYQMDRPSLGARHSAYAAQTPAQPQAPSYAAPPPSDAVGFAEF SGTYSGRLVEETPLEEAQPPAEDQPLGAARGQVHENYIIAQTRDGMVIVDQHAAHERL VYERLKRQLAENGVATQGLLIPEIIELSDGDCARLLEVAEDLARLGLGIEAFGGSAVA VRETPAILGEVNAEAMIRDILDELADQGESQLVQARLEAILSRVACHGSIRSGRRMRG EEMNALLREMEQTPHSGQCNHGRPTYVELKLADIERLFGRS" /product="DNA mismatch repair protein mutL." /transl_table=11 /note=", DNA mismatch repair protein, DNA mismatch repair protein, C-terminal domain, mutl: DNA mismatch repair protein MutL" /note="Conserved hypothetical protein" CDS 1279919..1281214 /locus_tag="Silicibacter_1221" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MWSSNSRISSASLGAAKEDLMDGMEIAIANMSAAGPVLWAAGAG MLLVLVLLFQSWRTSARTARALEPLSQQMHTLGHVAQQLSAGQDALRGNLQTVSDTQA HAQMQILQTMEARLGDVQQRMNDRLAENAMKQARAMSEMQERMAESLHGNAKRTATSL TQLQERLAVIDKAQDNITKLSGDVLSLQDILSNKQTRGAFGEIQLNDIVSKALPSDSY AFQHTLSNGKRADCLIHLPNPPGPIVIDSKFPLEPYEALRGAETQEARAQAARLLKGA LRKHIRDIAEKYILEGETADGALMFLPSEAVYAELHANFSDVVREGFSLKVWIVSPTT CMATLNTMRAILKDARMREQAGAIRQELGLLHKDVERLGDRVGNLDRHFAQAQRDISD IKISADKAGRRAQRLDNFDFEDLNPESVSRVVALEHPGE" /product="RmuC domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3361 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1281211..1282524 /locus_tag="Silicibacter_1222" /function="COG: Adenylate cyclase, family 3 (some proteins contain HAMP domain)" /gene="cyaE" /transl_table=11 /note=", [EC:4.6.1.1] , Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Rutabaga protein)., Guanylate cyclase, Adenylate and Guanylate cyclase catalytic domain" /note="High confidence in function and specificity" /product="adenylate cyclase" /translation="MRPLRHRRTAPDAALLREAELRAEKVVSILRIFVALGLMVVFFL AVGEPPEEIADFLREQWIFAVLSMLSYLLLGVFSLWLARSGRFRRWMIWPVVTLDCLF MLVNAWVGLENISMPGALTFLLPPTWLVPVVMAFAVLRFNPYLQAYCVVLIVAGLGYL SFVSDVTVSPDAINRIKHLVSVPPNIVRLTMILLAGVVLVVAAAALRDLLHRTLIETE KRLLLTRYLPARLADRIQGETLADVRQEQRQDMAVMFVDIRGFTSWAEGRDPAEVGAF VTEYRIRVQKAARETGGMVDKFIGDGAMLLFDGEAAPQRALECAQRLSEEVQDWSETR LKAGRSAVSVGIGLHWGEVFSGVVGDEDRLEYTALGDTVNIAARLEQMTKACAMEIIV SDAVLAAAGEPAREGWIALEPAPLRGRNQPLALFGQKERPRREAC" /EC_number="4.6.1.1" CDS 1282603..1282926 /locus_tag="Silicibacter_1223" /translation="MTEIASNKAEQVALMAREIERAEPELRAFIADMNEDEQAELVAL VWTGRGVFEAEEFEQAVETARREKTTPTEDYLLATPNLAYDIEAGLEALGIDVTAAAE DVMGR" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3310 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1283009..1284151) /locus_tag="Silicibacter_1224" /function="COG: Saccharopine dehydrogenase and related proteins" /translation="MTIHWCGTGLSAIPGLRRLLEAGHDVAVWNRTPEKAAEAVGDLT TNIHKFSIARLSELLSPADVVVSMLPGDWHVELAELAISKGAHFVSSSYISPEMRALD QKAKDAGVALVNEVGLDPGIDHLMAHALVAEYAESPAFDADNEISFLSYCGGIPKIPN PFRYKFSWSPLGVLKALRSPSRSIRDFEVLDVARPWDAISSYDAPLATPETFEVYPNR DSLPFMEQYHFDKDWKVKTFVRGTLRLNGWTEAWADVFKEVETLEGPEGDARLKEMSD QFWDENAYDEGEPDRVVLCVDLKAEKDGQTKWHKTYVMDAWGDERGSAMARLVSYPVS YAIEAAMNGKIAPGVSAAPSDPALVDSWMGRIGALAQHLQVVSHRS" /product="saccharopine dehydrogenase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3309 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1284181..1285233) /locus_tag="Silicibacter_1225" /function="COG: NAD/NADP transhydrogenase alpha subunit" /translation="MTHLWVRAEQRLNEDRVGLTPAGAKALLEAGIRVTVEESSSRAI PLQGYIDAGCEIAPENAWPDAPRDAIIFGLKELPDDGTPLPHRHIMFGHAFKGQHSGK ELLRRFREGGGTLYDLEYLVDPSGRRVAAFGYWAGYAGAAVTLKAWAAQQRGETCGPV GVYKNKDALLADLGRELDATGADRPKAIVIGALGRVGTGAADLCEAMGVAVTKWDMNE TASGGPFPEILDHDLFLNCIFARPGTPVFVPKEALTAARNLTAIGDVACDPDSDYNPV PVYSRATTWDAPVVRVANDPVLDVMAIDNLPSMLPAESSEDYADQLLASLLTLSDLDA GVWGRAKAVFDEHVAG" /product="saccharopine dehydrogenase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3307 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1285245..1285859) /locus_tag="Silicibacter_1226" /function="COG: Glutathione S-transferase" /translation="MQLYYAPNTISVAVAIALEEAGLAYEAVKIDFAEKQQTTRAYHQ INPKGRVPALAVEGGILTETGALLEFIADLAPDADLRPSDPVLQARMREVMFYLASTM HVNHAHKMRGSRWASNPASFKDMARKVPETMAASCEYICNHGLRGPFVLGDTPCLADF YLYVVCTWLEGDGVKLAGFPKLRAFIEAMDARDSVKTVRAKDML" /product="glutathione S-transferase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3306 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1285880..1286536) /locus_tag="Silicibacter_1227" /function="COG: Phosphoglycerate mutase 1" /translation="MSEITLVRHGQANTAARDEASYDKLSPLGHQQAQWLGDHLRDCK DHYARVYCGTLTRHEETARAMGFDAGDIIRDPRLNEMEYFTLAQAMEAQHGLAIPKER EGFVAHLPKVFAAWEADCIDTPPESWRDFETRTKAALAEISEGEGPALVVTSGGLISM VMRQCLGLDTAATARIALAIMNTSLHRLHNIGGTYAPVLFNGVPHLQAPDRQYARTHL " /product="phosphoglycerate mutase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3305 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1286650..1286877) /locus_tag="Silicibacter_1228" /translation="MATCLLYNHSESRPARFYRIELAMNLFDEVSLLREWGVKGGKGC STIHIFGNLRDASVAADRHRHRMLKRGYDRA" /product="Hypothetical 22.9 kDa protein y4dW." /transl_table=11 /note="Conserved hypothetical protein" CDS complement(1286966..1287685) /locus_tag="Silicibacter_1229" /function="COG: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /translation="MPDANASPLVTILDDEPEIRQLLTETLEDAGYRTQSFSRARDFE AALKRVTPDVCLVDLSLPDTDGLALVHRLALEQGASVIIISGRAQVQDRVTGLELGAD DYITKPFDPAEVVARIRVRLRDTSRGGQPDTGDRAEFSGWTAHFDRYALEDENGEETA FSHAEGEVLRLFLESPKRLISRAQMMERLGGGAGDSFDRAMDVRISRLRTKLREDPKN PRLIKTIYGAGYIFLGDVSWR" /product="DNA-binding response regulator" /transl_table=11 /note="identified by match to putative ortholog SPO3298 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1287678..1289582) /locus_tag="Silicibacter_1230" /function="COG: Signal transduction histidine kinase" /translation="MKQNTAQRMAMIDAGLNLIAQAMSIYDRNLRLAACNHRFQEMFS LPPELVQEGATFEDTIRFIAVQGDYGPIDDIDSFVQLRVEQARAFVPHYVERQRANGH VISIEGAPLPEGGWVTVYTDITRTKRVEELLRARSEELSDQVMSYTEELSATNRKLAA TITTLEETQRQLTQTEARTRLTTEMMPAHIAHVDADGHYTFTNGRLSKVFPGRPSDIL GQHIAEALGSAAYARIAPHLSAAYQGESPVFEFTEDQDSRRLRVAFTPDNEGGVFILS MDVTEETQTRVALQQARKREIAAQMTSGLAHDFSNLLTIILGMQTRLDRMTLPEGAGE LVEATLSAARRGGRLLDRMAEMTSHRGLRPQATDLHALLDEMKILATPSLPQGIGLSV LDNTSEGPVLLDPGRLQDALLNLILNARDACGTSGQITVAAHLVGQTWIEFSVSDTGP GFSVQALENALNPFFTTKGQEGSGLGLSMVYDMVKSAGGDIRISNTVSGAMVTLRLPY RPAPMAAGGIALLVEDSDTLRATYRQVLMDLGYSVIEATSVDEAVALLADVEGIALIL SDIKLEGDATGVDLCTRLGPDAPPVVLMTSLPHTDPLYRAALTLAPLLPKPFESAHLM ALLQQKADHA" /product="sensory box histidine kinase/response regulator" /transl_table=11 /note="identified by match to putative ortholog SPO3297 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1289843..1291828 /locus_tag="Silicibacter_1231" /function="COG: Long-chain acyl-CoA synthetases (AMP-forming)" /translation="MSQTAAQTSSGAGQLMSVPALLERNATVHANRPAYREKEFGIWQ SWTWKETAEEIEALALGLMNLGVAEGDFIAIIGRNRPSLYWSMVAAQSVGAVPVPVYQ DSSAEEMAYVLDHCGAAYVIAGDQEQVDKVLEVQDTLTNLKHMIYVDPKGLRKYDHHQ LHQYSHVQEQGRAARDELSSDLAARKAKLTYDSTCVMLYTSGTTGRPKGVVLSNRNVI ESAKNASTFDKLTENEDILSYLPMAWVGDFIFSLGQSYWCGFCVNCPESEDTMMTDLR EIGPTYFFAPPRVFEGQLTNVMIRMEDAGKLKQKMFHHFLAHAKKVGGLILDGKPVGM MDRLKYRLGDLLVYGPLKDTLGYGRIRVGYTAGEAIGPEIFDFYRSLGINLKQLYGQT EATVFITVQPDGEVRADTVGVPAPDVEIKIDDKGEIHYRSPGTFVEYYKNAESTASTK DAEGWVATGDAGFIEESSGHLRIIDRAKDVGKMASGAMFAPKYVENKLKFYPDILEAV LFGNGRDRCVAFINIDLTAVGNWAERNNIAYASYQELAGHPRVLETIRNHVEAVNVSV AQDEMLSGCQVHRFVVLHKELDADDGEMTRTRKVRRRIVEEKFADIIAALYDGSEQIS TRTEVTYEDGRKGAISATLTCVDAKVQSPMAQQVAAE" /product="AMP-binding enzyme" /transl_table=11 /note="identified by match to putative ortholog SPO3296 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1291913..1292731 /locus_tag="Silicibacter_1232" /function="COG: ABC-type spermidine/putrescine transport systems, ATPase components" /translation="MLDAADSYVTEDGRTIGGVVMEMKNITLRFGGVVAIKDISFDIR EGEIRAIIGPNGAGKSSMLNVISGFYVPQEGEVWFHGAKRPPMKPYEVARQGIARTFQ NIALFDGMSVLDNVMTGRLNYMKAGMFQQAFWKGRAEKEEVENREVVEKIIDFLEIQA IRKTPVARLPYGLKKRVELARALAAEPKLLLLDEPMAGMNVEEKEDMSRFILDVNDEF GTTIALIEHDMGVVMDLSDRVVVMDYGKKIGDGTPDEVRNNQDVIDAYLGVSHD" /product="branched-chain amino acid ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3295 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1292770..1293756 /locus_tag="Silicibacter_1233" /function="COG: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components" /translation="MPDQLIFAMEVTLNGLMAGVLYALVALGFVLIYKASGIFNYAQG VMALFAAMTLVGIMQGQVPFSHLINAVFGGHITHFGWTVPSFVAIMMTVAVMVLLAWL VQVLVMKHLVGQEPIILFMATIGLAYFLEGVADLMWGSEIKTLDVGLPQGINLWIDET TFGIFGYGFFIDNLDIVATVIAALLVTGLVLFSQYTKQGRAMRAVADDHQAALSVGIS LNYIWVLVWSVAGFVALVAGIMWGTKSGVQFSLSLIALKALPVLMLGGFTSIPGAIVG GLIIGVGEKLFEFLIGPMVGGATENWFAYVLALIFLVFRPQGLFGEKIIERV" /product="branched-chain amino acid ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO3294 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1293793..1294227) /locus_tag="Silicibacter_1234" /translation="MGEMTVMLERLRQLEAARKRGDLTDAQYRDARSKLLSVVEDAEV EPTGPRPRTTATRSQAARPRSRPAAPAPTRRAAPAAAPHSDSVEPQDMSFFWGLVLVG LCGAAMITFLIGRLIGDITIALTLAVTVVAAVVIAAFQRMQG" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1294321..1294581 /locus_tag="Silicibacter_1235" /translation="MAKLISILNVIAWSGFWAFGYLALTGEGYTGGQVTVATLLAALG LFAGIFAYLKLVRISERKGYAKPSNRMTRTQRDDAQSKWGEV" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3293 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1294620..1295696 /locus_tag="Silicibacter_1236" /function="COG: ABC-type branched-chain amino acid transport system, permease component" /translation="MFYREAGDFKLSYVEDSQTFPIKFDRYRYYAVLALAFGVVPFVV NDYWVNAILLPFLIYAIAAIGLNILVGYCGQVSLGTGGFMAVGAYACYKLMTAFPEVS MFIHVLLAGGITALVCVLFGLPSLRIKGFYLAVATLAAQFFLVWLFNRVPWFYNYSAS GQINAPERDVFGIIITGPNAPAWATYLFCLIFLTFCAIVARNLTRGTQGRTWMAIRDM DIAAEIIGVNPLKAKMTAFAVSGFFVGISGALFFAVYLGAVEVGEAFGINKSFLVLFM VIIGGLGSIFGSFAGAAFLVLLPVILKVVGVDWLGWPTDIVAHFQLVIVGALIITFLI LEPHGLAQLWRVAKEKLRLWPFPH" /product="branched-chain amino acid ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO3292 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1295788..1297071 /locus_tag="Silicibacter_1237" /function="COG: ABC-type branched-chain amino acid transport systems, periplasmic component" /translation="MKLKLTSVALSALIAASPAMADLVFPDLSYRTGPYAAGGIPFSD GYNDYFTLVNERDGGIGGVKARVIECETGYNTEKGVECYESTKGEGALVYQPLSTGIT YQLIPKVTADGIPLHTMGYGRTSAANGKVFSNVFNYPANYWDGASGVINYLLEENGGD LNGKKIALVYHNSAYGKEPIRTLEELSKKHGFELSLLPVDHPGQEQKSQWLQIRRDRP DNVVMWGWGVMNQVAIQEASNIRFPMENFIGVWWSGAEHDVMAAGDKADGYKAVTFHN VGRDFPIFEDIQTHVVDKGLAAGAGDQIGNVLYNRGMYAAMLAVEAAKTAQEIHGTAE IDASMMRDGMEALSITAEKMNALGMPNFGPSFDVSCENHGGPGLVGVTQWDAETQTWS LVSGFNPTDQEVIDALVAEDSASYAAENNIEERCN" /product="branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid binding protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3291 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1297190..1298026 /locus_tag="Silicibacter_1238" /function="COG: ABC-type spermidine/putrescine transport systems, ATPase components" /translation="MLDAANSTDVQAETLLEVNNIEVIYNHVILVLKGVSLNVPKGGI TALLGGNGAGKTTTLKAISNLLHSERGEVTKGSVRYRGRDVHEQDPAELVKTGVIQVM EGRHCFEHLTVEENLLTGAYTRGDSNAKIQEDLELVYTYFPRLKERRKSQAGYTSGGE QQMVAMGRALMSRPETILLDEPSMGLAPQLVEQIFEIVKSINENEGVTFLLAEQNTNV ALRYAHYGYILESGRVVMDGPAAELRENPDVKEFYLGMSDEGRKSFRDVRSYRRRKRW LS" /product="branched-chain amino acid ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3290 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1298043..1299260 /locus_tag="Silicibacter_1239" /function="COG: Coenzyme F390 synthetase" /translation="MTYFDKLETRSAEERAADLATLLPEQIARAKAAPGFATQLADVD PKKITSVSALAELPVLRKSDLSAAQSAKPPFGGFTVKPAHGFAHIFQSPGPIYEPGGV DHDWWRMGRFLHAAGVGERDVVQNCFGYHLTPAGMIFENGARAVGAAVLPAGTGQTEL QVTAARDVGATTYAGTPDYLKVILDKAEEMGVELGFKKAAVGGGALFPSLRQEYADRG ISCLQCYATADLGNIAYESAAMEGMIVDEQVIVEIVTPGTGTPVAPGEVGEVVVTTLN RDYPLIRFATGDMSAVMPGQSPCGRTNMRIKGWMGRADQTTKIKGMFVRPEQVAALVD KHDEIVKARVVASRNGEMDVMTVRIEANGGDEITFARSVVDVLKLKGTVDIVTPGSLP KDGLVIEDQRSYD" /product="phenylacetate-CoA ligase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3289 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1299383..1301062 /locus_tag="Silicibacter_1240" /function="COG: ABC-type Fe3+ transport system, permease component" /translation="MTHASQTQAPAPRRKTSARIKGARRFQVVAWVVAIACLLPMAAV AIAALTGGVETITHLGQTVLPRYARTTVYLVLLVSLGTFSIGVGAAWLVTMTRFPGAR FFEIALVLPLAFPAYVLAYGYTFLLDHPGIVQTTLREVTGWGPRDYWFPEIRSLGGAA LMLVLVLYPYVYLLARAAFLQQSASAFLAARALGDSSWRAFWRVSLPMARPAVASGVL LTVMETIADYGTVAYFGVQTFATGIYTSWFSMADRAGAAQLALCLLGFALMLAVAERI SRGRARYHHAGKQQAALPPATLSRGKAAGAIILCALPVVFGFLVPLISLTLMGLNSEQ NLLSRRYISFITNSLTLASTAAVVTLLAAVCLGFYQRLKPGRLSSTAANVSRLGYAVP GGVIAVGLMVPFAAFDNALDAWMQANFGLRTGLLVTGSIWLLVVAYMVRFMAAALGAY EGGQATVHANMDAAARSLGQSPLGMLRRVHLPILTPSLLTALLIVFVDVMKELPATLI MRPFNFDTLAVQAHRLAADERLEGAAVPSLVIMAVGLLPVILVCRQVRRRS" /product="ferric iron ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO3288 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1301066..1301929) /locus_tag="Silicibacter_1241" /function="COG: Putative GTPases (G3E family)" /translation="MRIPVTIISGYLGAGKTTLINSLLGEDHGLRLSVLINDFGSINI DEALISNKTVDSVALTNGCVCCSLGDDLALSVNDLVSRAEPPDHILIETSGVAEPVAI ANALLNDSRLSYAGIVTVVDGSNFSTLMDDPLLKPQVTQQICAADLVLVSKLEHESDD GVIAALGALGARTPTLTSDIELSRLLFDITPLPRSKSTVSHPGYVSWHHRSTEVIDRR ALGDKLAERPEGLYRMKGFVLTSGGAYQLHIVGRHVEARRCDANETLLVALGPEQRIS HDQIEAWWTGS" /product="CobW/P47K family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0657 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1302316..1303326) /locus_tag="Silicibacter_1242" /function="COG: ABC-type thiamine transport system, periplasmic component" /translation="MKIKVFTTVIAASLATTAVADGVVNLYSSRHYDTDERLYTDFEE ATGITINRIEGKADELVARMQAEGANSPADVLITVDTSRLERAKNAGVLQSIDSDILE ERIPANLQDSDNQWFGFSQRARIVFYDKTDVANPPADYMDLAKPEYKGMVCHRSSSNV YSQTLLSAIIENHGEEAARDWAEGIVANFARDPQGGDTDQLRGLISGECDVSIANTYY FARALRKDVKGLSAEIEKIGVAFPAQDAEGAHMNLSGAGVAAHAPNRENAIKFLEYLA SDQAQEYFSGGNDEFPAVPGVSKSESVAQLGEFKADDVDLSKVAKNVPTAQKIFNEVG WE" /product="ferric iron ABC transporter, periplasmic ferric iron-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3287 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1303687..1303812) /locus_tag="Silicibacter_1243" /gene="rpmJ" /translation="MKVKNSLRSLKNRHRDCRVVRRKGRVYVINKTQRKFKARQG" /product="ribosomal protein L36" /transl_table=11 /note="identified by match to putative ortholog SPO3284 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" tRNA complement(1303897..1303968) /locus_tag="Silicibacter_39" /gene="Silicibacter_39" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS 1304117..1304977 /locus_tag="Silicibacter_1244" /function="COG: Predicted N-formylglutamate amidohydrolase" /translation="MSGQAYSIEMPQGWQSPVVIASPHSGSNYPKTFVSQSILDANRL RSSEDAFVDQLFAAAPRLGMPLLTAKMPRAYVDLNRSSDELDPALIEGARRRGQNPRI ASGLGVIPRVVANGREIYRGKIPMDEAVARIDDYWVPYHAALQRLLDASHTRFGRAIL IDCHSMPHEAIESCSPRRERRPQIVLGDRFGAAADAAIVDQVEAAFAEVGFRVARNSP FAGAYITQTYGRPFRHQHAIQVEIDRSLYMHEADVAPNDGFDDVRARLTLALQRIAQL GEDLTPMAAE" /product="N-formylglutamate amidohydrolase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3282 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1305014..1306285) /locus_tag="Silicibacter_1245" /function="COG: Nucleotidyltransferase/DNA polymerase involved in DNA repair" /translation="MPALCRECLHCFDPGTSPRGPKRCPVCRSPRVKQHEELLSLSIA HMDCDAFYASVEKRDNPELADKPVIIGGGHRGVVSTACYVARIRGVRSAMPMFQALKL CPDAVVIKPRMEVYAETSRAIRAMMDELTPEVEPLSLDEAFMDLSGTERLHGAAPAVM LARLVKRMKDELGVTGSIGLSHNKFLAKVASDLDKPRGFSVIGKAETAEFLRDKPVRL IWGIGPAAQASLEKAGIRAFSDLLRWERRDLHDRFGSMGDRLWHLARGEDRRKVSARA PVKSISKETTFFEDTMHSEVLDGHLWRLAEQVSDRAKAKGLAGRVVTLKLKRANHSTL TRRQSLHSPTQYADQIYRTARRLLDQTIQQGPFRLLGCGISELAPEAQADATGDLLDP DATKRANAERATDEIRKRFGKEAIRKGRSLR" /product="DNA polymerase IV, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3280 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1306388..1306807 /locus_tag="Silicibacter_1246" /translation="MSFKGAKLLLFLGPHLLVILRDQKAGIPFPGHWDFPGGGREGDE TPQACALRETYEEVGLILPESRIHYSRRYPRPDGATWFFAAEIGARCVGDIKFGDEGQ GWDLMTPEDYIAHPLGIPRFKVRLQDYLQSGRRAAEI" /product="NUDIX domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3279 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1307221..1307946) /locus_tag="Silicibacter_1247" /function="COG: Orotidine-5'-phosphate decarboxylase" /gene="pyrF" /transl_table=11 /note="identified by match to putative ortholog SPO3278 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="orotidine 5'-phosphate decarboxylase" /translation="MTSPLADDRLIVAMDVPNALEGLKLAEQLGDAVSFYKIGLGMLT GGGLALANELKQELGKKIFLDMKLFDIGATVENAVRGLAQFDLDFLTVHGDPYVVRAA KEGAAGKDLKILAVTILTSLDRDDLDGAMIKSGEIKDLVQERAGKAFSAGADGVIASP QEAAMIRSLPEAEGKLIVTPGVRPVGADLGDQKRVTTPAQALASGVDHIVVGRPIWQA EAPRVAAESILQEMNSPQAKAPN" /EC_number="4.1.1.23" CDS 1308101..1310809 /locus_tag="Silicibacter_1248" /function="COG: ATPases with chaperone activity, ATP-binding subunit" /gene="clpB" /translation="MPTSLIKAYTDPVPPSGRGHERGAYEEEKKMDLNKFTERARGFV QASQTIALREGHQRLTPEHILKALLDDDQGMASNLIAHAGGNIARVSEAVEAAIGKLP KVSGDAGQIYLDGQTAKVLDEAAKVAEKAGDSFVPVERLLTALALVKSKAKDALDAGG VTAQKLNEAINDVRKGRTADTATAEDTYEALKKFTLDLTERAREGKIDPIIGRDDEIR RAMQVLSRRTKNNPVLIGEPGVGKTAIAEGMALRIVNGDVPESLKDKRLLALDMGALI AGAKYRGEFEERLKGILNEVTDAAGEIILFIDEMHTLVGAGKSDGAMDAANLIKPALA RGELHCIGATTLDEYRKYVEKDAALARRFQPVMVTEPTVEDTISILRGIKEKYELHHG VRIADAALVSAATLSNRYITDRFLPDKAIDLMDEAASRLRMEVDSKPEELDALDRQIL QMQIEEEALKLEDDAASKDRLEHLQKELADLQERSREMTAQWQSERDKLASARDLKEQ LDRARAELDIAKREGNLAKAGELSYGVIPGLEKQLSEAEQKEEQGLMVEEAVRPEQIA AVVERWTGIPTSKMLEGEREKLLRMEDGLHKRVIGQNAAVTAVANAVRRARAGLNDEN RPLGSFLFLGPTGVGKTELTKAVAEFLFDNDSAMVRIDMSEFMEKHAVARLIGAPPGY VGYDEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQ TLIILTSNLGAQALSQLPDGADAADAKRDVMDAVRAHFRPEFLNRLDETVIFDRLGRH DMDGIVEIQLGRLAKRLAQRKITLELDEGAKTWLADEGYDPVFGARPLKRVIQRALQN PLAEALLAGDIKDGEIVPVSAGAEGLVIGDRVGSSDRPLPDDAVVH" /product="ATP-dependent Clp protease, ATP-binding subunit ClpB" /transl_table=11 /note="identified by match to putative ortholog SPO3276 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1310999..1312492 /locus_tag="Silicibacter_1249" /function="COG: Glutamate synthase domain 2" /translation="MGFAMNAVSILAVMFICLIGVLGLVALIMFLIDRSQTQDAIRRN YPVLGRFRHLFSTLGEFFRQYFFAMDREELPFNRAQREWIARACAGVTNTVAFGSTRN TSVPGTPIFVNAPFPPLDDQFASAEPMLIGPTARVPYNAPSFFNISGMSYGALSRPAI TALSRGAREAGVWLNTGEGGLSPFHLDGGCDIVFQIGTAKYGVRDTAGNLSDARLKEL AEIPQVKMFELKLAQGAKPGKGGILPAEKVNAEIAEIRGITEGEASISPNRHLDIANY DDLLDIVARIREVTGKPVGIKTVAGSEVALREMFLNFAARPEDVPDCITIDGGEGGTG AAPMPLIDLVGMSVREALPLVCNLRDEYGFKDRIRLISSGKLVNPGDVAWALAAGADF VTSARGFMFSLGCIQALKCNRNTCPTGITTHDPRFQKGLVVEDKYKKVARYAREVIHE VETIAHSVGVDEPRKMRRRHVRIVGEGGASVPMNVDQPSYGSRGSNA" /product="glutamate synthase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3272 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1312465..1312866) /locus_tag="Silicibacter_1250" /translation="MTDVSMNPLTVILGIKILVTLGLTHLFLFAPQKRLNGLMAQYGD SPLTYRLYGLTLLVLLGMYFSGLIAALGGEVSHEVLALGILSNGGAAVLMQAWSGHPT LRRASWIFAGIAVALLAALLFPDQALLPLLP" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1313161..1314063 /locus_tag="Silicibacter_1251" /function="COG: Sulfite oxidase and related enzymes" /translation="MAKRWTDDLTAADVTPEAVFWNRRKLLAGLAGAGLGSIASGAIA DDALEPNTWEEVTTYCNFYEFGTGKTDPATYAHEMTTSPWEVEIDGLVDNPGTYGFEQ ILAEMTLEERIYRFRCVEAWSMVIPWQGFELADLLNLAGVQEGAKYVAFETLLRPSEM PGTRYPVLDWPYREGLRLDEAMHPLTLMATGIFGKPLPNQNGAPLRLVVPWKYGFKSI KSVVKITLTDQEPPTSWNMANAREYGFYSNVNPEVDHPRWSQATERRIGGGLFSRRQP TLMFNGYEKEVASLYDGMDLTKYF" /product="oxidoreductase, molybdopterin-binding" /transl_table=11 /note="identified by match to putative ortholog SPO3271 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1314063..1314662 /locus_tag="Silicibacter_1252" /function="COG: Predicted membrane protein" /translation="MDLSTLNTALRRVPSWLVYLCGLAPAVWLFWQGLTGALGVEPIK ALEHRYGELALQFLIASLAVTPLRRIVGLNLMSHRRALGLLSFVYVVCHLLVWLLLDV QIPSQILADIAKRPYITVGMLAFVLLVPLALTSNVVSIRKLGTRWRKLHKLSYPAAIL AAVHFVLLAKGFQIEPLLYLGGIGVLLVLRLRLPAPKRA" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3270 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1314723..1314989 /locus_tag="Silicibacter_1253" /translation="MRRACTRALHAKPEFILMKIKDILKICGKNDSFAKKGLRAFVVM RRTPFTGGAEARLAAAGTLLTDRKDGYDAQERLGHSSMDVGGGA" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" rRNA 1315339..1316794 /locus_tag="Silicibacter_64" /gene="16S rRNA" /description="RNA" rRNA 1315840..1316173 /locus_tag="Silicibacter_57" /gene="16S rRNA" /description="RNA" CDS complement(1317840..1318871) /locus_tag="Silicibacter_1254" /translation="MKLLGMISLSSIAMSAYTDLVRLLKDEALSGVEGKPTLKERGDK AYWYAVRRVGTEMRFLYIGEDSDETRARIGRIEELRGAAKERQAERSRLVRLLRAEGM TPTDRSTGSILSAMAAAGTFRLGGTIVGTNAFRLYEGELGVRLPLAGMANTADIDIAQ FEKLSVALQDQVDPGLAETFSALKFDPLPALDQGRSWRWAQGGSGQLVEFLTPAFGDE SVRDLPALGVSAQGLNYLNFLIAEPIHAAAIYRSGVLVQVPRPERYAIHKLIIADRRR DGAGSLKSAKDREQAAFLIEAMAEDRPDDLLQAYATAMEVGPRWREHIGNSLTRMPET KGTLDSLGA" /product="hypothetical protein" /transl_table=11 /note="Hypothetical protein" CDS complement(1318988..1319992) /locus_tag="Silicibacter_1255" /gene="repA" /translation="MTSALSEAGGYPPEGQGAYFLCDIFDAMPKNDLASMEHPLFSLS TRPDRRILNYEHNGAEITVTPSVKGLATIHDKDILIFCVSQLMAALNAGRQVSRVLHL TAHDLLVACNRETSGDAYRRLRESFERLAGTRITTNITTGGQEITTGFGLIESWEIVR KARGGRMVSVAVTLSDWLYRAVLSKSVLTLSRDYFRLRKPLERRIYELARKHCGRQDS WQISVETLLKKSGSASPRRVFRKMVRDMIESQPLPDYEMAELEGDIIRFSQKAAVVDV PPPVISEAARDEARRLMPGVDVHALEADWRATWARTGAPRLRKPDAAFVGWVRKRMND " /product="Putative replication protein." /transl_table=11 /note="Conserved hypothetical protein" CDS 1320476..1321885 /locus_tag="Silicibacter_1256" /function="COG: ATPases involved in chromosome partitioning" /gene="repA" /translation="MAKDIHSKAGTTLPPYFNIDPDAAMAELDQPTDTARFAEIAEGC ARGRADLASRGLNEEGSKNLRLFSTWEITRYLIPVAQAHFRRVLKANPDLPQGRSETE GGAKWFTLDEVLRLRAFFAAQGSKAKNYLPYRPEGLPAKLVAVANFKGGVGKTSTAAH LAMSAALDGYKVLVIDLDSQGSMTSIFGGKIEDEWQTAFPLLARHYGEHLRVENQRRL DRGDAPQPLDESLTAAMEMTAKDVIQPTHWPNIDLIGAQLNLYWAEFQIPVWRMAARS WKLWDALTDRLEADGVLDQYDVVFIDTPPALGYLTINGLSAADILLVPMGASFLEFDS TGRFFDMLHSTFASIEEGENLAARALGRPEIGFEWDAVRAVITRYDGAQQGELAGLVQ AYMGPTLSPHRQDFTALIGQAGEQVNGIYEADYRDFNRETYARGRETFDETYAAFKRL LNGVWRREELAVQEERAAS" /product="SopA protein (Plasmid partition protein A)." /transl_table=11 /note=", Cobyrinic acid a,c-diamide synthase, CobQ/CobB/MinD/ParA nucleotide binding domain" /note="Conserved hypothetical protein" CDS 1321959..1323089 /locus_tag="Silicibacter_1257" /function="COG: Predicted transcriptional regulators" /translation="MAKRKRLTPAQPTYLSGNEKAGASAPGPLSMGAAPIAQVASDTS ASAALEELSGVLERARTKGLMIEELPLGAIDETYLVRDRIVQGEDDMQGLMESLKARG QHTPIEVVKREDAHGEKTHGLISGWRRLTALRRLYEETSDPKFATIKALVVRPESAAD AYLAMVEENEIRVNLSHYERARIAVQALAEGVYPDQRKALLGLFQNVPRAKRSKIASF VTLVEALDDVLRYPTAIPEKLGLGLARAFAQTPQFAQEVAQKLRERPCVDAEGEQALL SDLLAAHEQSGIADVTETPPAVSDPEETPQTPPTSDSPTLMPQVRSLDPVDQNENSEQ GSMPVSTGVHLDYSPSHQRIELTGPGVDTALLTALKDWLRQR" /product="Probable chromosome partitioning protein parB." /transl_table=11 /note=", ParB-like nuclease" /note="Conserved hypothetical protein" CDS complement(1323194..1324498) /locus_tag="Silicibacter_1258" /function="COG: Predicted UDP-glucose 6-dehydrogenase" /gene="ugdH" /transl_table=11 /note=", [EC:1.1.1.22] , UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH)., UDP-glucose/GDP-mannose dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain" /note="High confidence in function and specificity" /product="UDP-glucose 6-dehydrogenase" /translation="MRIAMIGTGYVGLVSGVCFSDFGHDVTCVDKDATKVARLQAGEA PIYEPGLEDLMARNVAAGRLSFTDDLATAVATADAVFIAVGTPTRRGDGHADLTYVMA ASEEIAAALQGYTVVVTKSTVPVGTNRQVKQVIAKSNPAAEFDVASNPEFLREGAAID DFMRPDRVVVGVQNERAAEVMAEIYRPLYLRDFPILTTDLESAEMIKYAANAFLATKI TFINEIAGLCERVGADVKEVSHGMGLDGRIGNKFLHAGPGYGGSCFPKDTAALARIGQ DHGYPMQITETVMRVNHEIKARMLEKLRDACDGSFNGKTITILGVTFKPNTDDMREAP SLTIVPALIGGGAKVRVVDPQGEAEGRDLLPGVKWEEDPYKAARNADLVVLLTEWNEF RALDLKALARKMAQPRMVDLRNIYTAKSARQAGFETYMSVGR" /EC_number="1.1.1.22" CDS complement(1324700..1324864) /locus_tag="Silicibacter_1259" /translation="MARNAATVLTNNLTTTIAEADVVEEAYAAQTLFTHHNYALLGLH FPKVQIGQQI" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1325320..1326321) /locus_tag="Silicibacter_1260" /function="COG: Nucleoside-diphosphate-sugar epimerases" /gene="wcaG" /transl_table=11 /note=", [EC:5.1.3.-], NAD-dependent epimerase/dehydratase, NAD dependent epimerase/dehydratase family, dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase" /note="High confidence in function and specificity" /product="capsular polysaccharide biosynthesis protein I" /translation="MRTALITGTAGFIGYHLATYLLASGWQVVGLDCLSPYYDIALKR RRHAMLEVNDNFIPVIGKLEDPGRLMGLLADHKPNAVIHLAAQAGVRHSIDAPRDYLE ANLIGTFEVLEAARAHPPEHIMIASTSSAYGANTNIPFDEHQKADHQMSFYAATKKAG ETMAHSYAHLYGLPTTMFRFFTVYGPWGRPDMALFKFTKAIEAGEAIDVYNHGRMSRD FTYIDDLVAGITGLIEAVPGDTPVSTQDTLSPVAPFRIVNIGASKPTPLMDYIAALET ALETTARKNLMEMQPGDVPATWADTTLLSQLTGYEPQVSVEEGVARFVAWYRGYYAS" /EC_number="5.1.3.-" tRNA complement(1326452..1326524) /locus_tag="Silicibacter_4" /gene="Silicibacter_4" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS complement(1327105..1327482) /locus_tag="Silicibacter_1261" /function="COG: Predicted transcriptional regulators" /gene="phrR" /translation="MPHPVDIHVGKRIRTRRWTVDETQKYLAEKVGVKCQQIQNYEVA SNRVSASRLWDISKVLGVDVTYFFEGFDPRQETSDTHEFHRTASQEKEAIALVQSYYK IPKHQRPIFLQLAKSLTDNTPAD" /product="Putative HTH-type transcriptional regulator y4wC." /transl_table=11 /note=", Lambda repressor-like, DNA-binding" /note="Conserved hypothetical protein" CDS complement(1328015..1329436) /locus_tag="Silicibacter_1262" /function="COG: Mannose-1-phosphate guanylyltransferase" /gene="manC" /transl_table=11 /note=", [EC:2.7.7.22] , Mannose-1-phosphate guanylyltransferase [GDP] (EC 2.7.7.22) (GDP- mannose pyrophosphorylase) (GMP)., Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase, Mannose-6-phosphate isomerase, GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase" /note="High confidence in function and specificity" /product="mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase" /translation="MIHPILLCGGSGTRLWPLSRKSYPKQFAPLVGDITLFQSSAQRL AGEGFASPMVVTNSDFRFIVTQQMAEVGIDPGAILIEPEGRNTAPAVLAAALFLQKHD PDGLMLVAPSDHVVPDSEAFRAAIAAAEPAAQAGQLVTFGIKPDRPETGYGYLELASK PEDFEPKVIGLKRFVEKPDLDTAKDMLRSGNFLWNAGIFLFSVESIIQAFKAHCPHML VSVQTALDLGEHDLGFLRLDPDAWSGAEDISIDYAVMERAENLAVVPYAGGWTDLGGW DAVWREGVPDQDGVVIHGRASAIDCTDSLLRSEDERLEVVGIGLKNIITVAMPDAVLV ADVSRAQDVKKAVETLKAKSVRQAEAFPKDHRPWGWFESLIVGERFQVKRIHVNPGAA LSLQSHHHRSEHWIVVEGTARVTVDDTVSLVTENQSIYVPLGAVHRMENPGKVPMVLI EVQTGSYLGEDDIIRYEDVYARA" /EC_number="2.7.7.22" CDS 1330692..1331576 /locus_tag="Silicibacter_1263" /function="COG: Antirestriction protein" /gene="ardC" /transl_table=11 /note=", DNA primase traC (EC 2.7.7.-) (Replication primase)." /note="High confidence in function and specificity" /product="DNA primase traC" /translation="MTAEKFDVYSHVTNQIIAQIEAGAPPWRKPWTGGGTGGSLPERF NGKAYRGINILMLWATAMAKDYSSARWMTFNQVKQLGGHVRKGEKSATVVKYGTVERE DENGEERQIPYAKAYRVFNADQIDGLPAEFYILPDPPRDLGTVADPAMEAFFAATGAQ IDVTKEPRAYYSIKTDRIHMPPIATFHRATGYYGTLAHELTHWTGATKRLDRLGRFND RKLYAFEELVAEIGNCMLCTQIGVEPEFGQSAAYVEGWLEAMKEDSRAIFRAASEAQK AVDYIMERTAQADRMAAE" /EC_number="2.7.7.-" CDS complement(1331996..1332841) /locus_tag="Silicibacter_1264" /translation="MFRFTAWTSTLALLAAPVMADGHASTMGYALSGDSTSLMVMDSI ATPDQVRSITLSTPVRSIAWRPVTRELVGFADGMIVTINPMTGETMDQSATFTDDAII ADGSVVAFDFNNKIDAVRAVGSTGENLVYFPSDFGDKRANSVRRFTDLFYAKGDMSEG VEPLIFANAYTNAINGAKAGGTFQYALDARANALVSLANNAGTLESIGLITIGGEPAD VLPVGGFDIVSPEEGADAAYAVLQIDGQDTAGLYAIDVTSGAATLLADLGTSDVSSFA VSTGM" /product="hypothetical protein" /transl_table=11 /note="Hypothetical protein" CDS complement(1332887..1333342) /locus_tag="Silicibacter_1265" /function="COG: Conserved domain frequently associated with peptide methionine sulfoxide reductase" /translation="MKRRTLIAGMLCSAAVPLRAAEGPFEITRSEAEWRAMLTDVEYA VMREEATETAFSSPLDTETRSGTFHCKGCDLPLYSSAHKYDSGTGWPSFWQSLPNAVG TKPDNSLFATRTEVHCRRCGSHLGHIFEDGPQPTGKRHCLNGVSLAFRT" /product="Peptide methionine sulfoxide reductase msrB" /transl_table=11 /EC_number="1.8.4.6" /note=", Peptide methionine sulfoxide reductase msrB (EC 1.8.4.6)., Mss4-like, SelR domain, TIGR00357: methionine-R-sulfoxide reductase" /note="High confidence in function and specificity" CDS complement(1333413..1333964) /locus_tag="Silicibacter_1266" /function="COG: Secreted and surface protein containing fasciclin-like repeats" /translation="MTFKTLVASSTAAIALATAAFAMNPTVGGAPMLEERNIIENAVN SPIHTTLVAAVQAADLVDTLQGEGPFTVFAPVNDAFAKLPAGTVETLLKPENKAMLQK VLTAHVVAGDWSAADIIAAAKSSPDGFYHFNAVSGDALSAKVVGGNVFIFDESGNAGK VTVADVDQSNGVIHVVNAVLVPK" /product="Periostin precursor" /transl_table=11 /note=", Periostin precursor (PN) (Osteoblast specific factor 2) (OSF-2)., Beta-Ig-H3/fasciclin, Fasciclin domain" /note="High confidence in function and specificity" CDS complement(1334086..1334772) /locus_tag="Silicibacter_1267" /translation="MSQQGDHNDDAALAGEYVLHLLEGDERAAFEARLALEPALRDLV RDWDESFVAMAEGIAPVAPPGSVKDELNAALFPDTVKPKRSLWSLLVGGVTVAVIVVG AVLLTPVLMQNPSFDPTFTANVVADDGTLVVAARFIAETGALELTREAGAARSGRVLE LWLIAEGTDTPVSLGVLPAEVETQIDVSPDIAERLVNGLLAISDEPPGGSPTGAPTGE VLAVGPVTST" /product="unknown protein" /transl_table=11 /note="Hypothetical protein" CDS complement(1334769..1335323) /locus_tag="Silicibacter_1268" /function="COG: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog" /translation="MQTLLTDTNDIENAIMRVGLGDRAAFSFLYDATSAKLFGVCLRV LGDRAEAEDTLQDVFVKVWHKADRYKANGYSPMTWLITLTRNTAIDRLRARKAGNVDI DDAHDLSDGSPTPEAEAIASSERQRLNACFEELQADRSEAVRRAYLDGDSYKDLAARY DVPLNTMRTWLHRSLLTLKDCLSR" /product="RNA polymerase sigma-E factor (Sigma-24)." /transl_table=11 /note=", Sigma-70 region 2, Sigma-70 region 2" /note="Conserved hypothetical protein" CDS 1335944..1338322 /locus_tag="Silicibacter_1269" /function="COG: RTX toxins and related Ca2+-binding proteins" /translation="MADNDSGTPATESNQTLTGTGADDQLSGGLGDDVITGGAGDDVL RGDGPIAGSWHYETFDRNFTSANGQAFDFGGDASERTGSGYVTDFDESSLTNAIRGTT GNPGDFGVIYTSTLNITDSGVYTFATNSDDGSTIQIFDSAGTPVTFTQGGTTADYMNN DFHQPATTRSGQVTLDSNETYTIQVRYWENQGADVLQVTVDPPGSTGAVNINDSGLVG VPPDPDYSTTGVPAGVEGDDFLSGGAGNDTLWGDGGDDTLNGGAGDDIIDGGRGADTI DGGFGLDTIDGGEEDDIIAGGEGNDVITGGVGDDIIFGDEFDPGAGNEYFYVGNAYIA DENYTITGSGDFAGPTASEIQVTTDPVTIRFLDDDTSLGGDDGANEVRADPTFQRVEI DGVEYGANLDFSVTFEDPTGTVYRFAVLDVDFDGDGSNQDANEDGHILIQIDGPAIVP GTVLDTRSGFQNISATDYDALRAATAFNDTIDGGDGNDTIEGGRGNDAITVGRGDIAT GGADADTFTLDFGQTSTDGSMVVTIDGSTTEIDGVDNDSLDLTGFGTFTLTQTTDTDG NSTSGTAVYADGTTVNFTEIENLIVCFAKGTQIKTSDGIRDIESLQVGDKLVTKDNGL QSIRWIGKRTLSEDKLDAHPKLKPIRIKAGALGEGMPSRDLIVSPQHRIVVRSKIAIR MFDTQEILVPAKHLIGLQDVSIAAEMREVTYYHLLCDNHEIIEADGAFAETLYTGTEA MKAMSPEALEEIMLILGDQFSTRRPLARFTPKGRQAKKLIERHIKNDRAVYC" /product="Iron-regulated protein frpC." /transl_table=11 /note=", Serralysin-like metalloprotease, C-terminal" /note="Conserved hypothetical protein" CDS 1342248..1342415 /locus_tag="Silicibacter_1270" /translation="MAHGIATILQRRNVVLSKEGYRTSDRIGALAQSHDGSEIAETAI EEAQARFLHLR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1342722..1342928 /locus_tag="Silicibacter_1271" /translation="MTNHYVATVPVKFTDTDGQERTRFQRVGAMFRNTRGGDGSEFFS LKLDFPVAVSELVVFPPSAKDPQD" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1343490..1344083 /locus_tag="Silicibacter_1272" /translation="MSRTKRLTEIEKMQIVREAAEGVSTSELAERFEVTSRAVRYVLK ADAERQMDAAIPVSAVSVKVTAAELEALDAVLAKAGIESRAEGLRRLIQAAGGVFVPD AQMAAEMARYRSSLHEVGNGVAQIAKQMTRANRMGQGAVGDASTEFSEPRLAQMRGLA RFILDSADEIDLLLRRRRDAMQLEATAALREFAHAAE" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1344070..1346280 /locus_tag="Silicibacter_1273" /gene="virD2" /translation="MRLNDAVDAVTGEVFRDGWSRIRGSMQGLHVAKQSQLVRAAAGH RPAVFKAIRGGGTHTKSQLANQLDYLTTKSTHIVDSSGFLDGKAKLEAKDIKDLTERF AKRWDAGFKPKLGQTTHMLMSFPIGTRGEDVRDIATDVAERFFQTDEGHFDYIIAVHE DRDHPHAHLVLNRRSQEGEFFFLGRNHRFNYDAFRLAMVEEAEKYGVRLEATRRVDRG VVHYPARTREVYAAKEEGRAPRERERVGADLTRTLAESANTRTVYHSLAAEASREARE DIAAALFRAGEVLARGGQVDRTGDVYMAEDQSFEDLRSLYAEKLARVQGMIAEKSDAE RPVLEKRLIEIQTQVQHMQPLGLRSSTLSETPSDGGIYSEANIDASQRERLAEPDLRA RIDVALRGTGISTSEVVARIETGASNAALEHQWIADDLSKVAEARDLNLERRADLEQA RDILNNVHVALGTLLEREAVLRHDGVIDEARAARVHLTKDRIEEAAKVVRLETSISER GEALIETRAVERLEAEQRAYLQEHPDLLQSPADVIRMDEEGRARIVDQKLADLIGREI EAARLGAHSRTPISVAVTRDLQARYPDMPGQLAEGLGETYAHVQDARLSQREVQVLQM PELDRVLTHERAGELSAPFETEDERDAFRTEIARVLDDRQLGRLTSGDADALEQVLGD RLDRLYVAKVYLQSDAATVNTEALRQVVDELADAEYEKHRATDVDGETERGQIH" /product="T-DNA border endonuclease virD2 (EC 3.1.-.-)." /transl_table=11 /EC_number="3.1.-.-" /note="[EC:3.1.-.-], homology to virD2, Belas" /note="Conserved hypothetical protein" CDS 1346289..1348283 /locus_tag="Silicibacter_1274" /function="COG: Type IV secretory pathway, VirD4 components" /gene="virD4" /translation="MGKARIATGILLVTLVTGAMGYTIASAVLSHQDLGFGAEIDFAY IAQNYLAILDRRPEDAQLIHLIIGSFAAAGLMLSLALSGSALTRFGQTHWQSAREMKA NGFFGAPGTGFILGKLGTPKSRAKFVCSKVFPHALIVAPTGRGKTTGFVIPNLLTWQG SAVTLDVKGECFEATARHRAAQGDKVYRFAPTDWEGKRTHRYNPLLRIYQLKDPARQQ MELQLLATLFLQSDNDRVQGLLKGGIDLFVAAGLLAFQRKRPTLGEIYRIAASGGNKQ KEYFARGHEVDNRAAKLIFTRLASTNNDTLTSYVSLLMTSGLDQWQNPAIDEATAVSD FDFRTIRKKPFSVYLVVQPLMVKPLAPLIRLFFSDLLSAMQEKDPGPDEPWPVMIMLD EFNRLGKMPIVVESIETLRSYSGHLAVVTQTIPALDEIYGENTRRALQGNAGVKLYLT PSDEKTVEELSKAVGKTTKTVVTRSQSIGKNPFEGRSQSTRTEESSLLPEDEARRLPL DEIVMVIDAQMPVRAKRIQYFDDRLFKTIHDAQTGDLPFPEPGGAQGKLPLTMRAMPM APPPDESSGPEADGKAARQTADGQSSGPSGAVPKKTAPIVQAVIAEAQRQMEMDLEGA VADAEAARIVDEAQMRSAVDGLNDMEAMLQEDRGQKLVGR" /product="Protein virD4." /transl_table=11 /note="TRAG protein, TraG/TraD family, homology to virD4, Belas" /note="Conserved hypothetical protein" CDS complement(1348510..1350507) /locus_tag="Silicibacter_1275" /function="COG: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain" /gene="phyB" /transl_table=11 /note=", [EC:2.7.3.11], Virulence sensor protein bvgS precursor (EC 2.7.3.-)., Bacterial extracellular solute-binding protein, family 3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase" /note="High confidence in function and specificity" /product="Virulence sensor protein bvgS precursor" /translation="MPRVQHKLGFTDLLVALSTALWFIPTYIAAEPLKVAYTEFPPYS FTNEAGAADGFSIDVIRRVLETAGHQPEFVHSTNPGHTLELLSSGGADLSTFMVTTPA RLEEVLATQEVGSIKLAAFTLRTSGFARSEDLAGKRIGVVKGSASTSAARMIPFAEIV EFQQTDDLIVPLLLGEVDAVVSGQEAFTARLREANVFGKIITLEPSLVSMPYAILVSE THADLLPNLNQALDRSLSPATIKALRESWFGRDTYLYEKPAFWFVAIAIALFTAVTGY LGVRVLRYKREAARALRANQANDLLVNALDELNAAIVIYDQNMRAVHRNAGFAKSFPR LVPQVDAGATMADLIGVSYKAAVVEFGVNDKSIDEFVSDVIASVEAGMDNRRLVKAKN GLVYEARDFRLGADHYASIRVDVTAQAALQETIVQQAEELKLVNARLESFAAIAAHDL RSPLSRIAPLVEFIIEDLDEAKIQVPQQVEEYLGLLTQQADAMSTLVEDLLTYASAGT QNGRPESFDPCDRLANVLKIIEPPEGFTIKTPQAMPQIFADPIAFETVMRNLISNALK HHGKGVGTVEVFATENLGHVQIHVSDDGVGIPEKYQNTVFEPFKRLSSTVSGSGLGLA FVQKTVESWGGSISLSSSPGEGCTFSITVPRGQQVEHILAS" /EC_number="2.7.3.-" CDS complement(1350747..1351292) /locus_tag="Silicibacter_1276" /translation="MWRVVGVERRRKPFKTYRDPEKEDNTMKRFALTTAAISALMAAP AMADLNSAGAQTFKEMQETYPAIDRKIFEQVDVNKDGVADMAEVDAAEQSGVLNVDMS AAEASGTYDPSPYGVEEAGALTFAELKDEYPSLTKKVFEEVDVNKDGVADMAEIDEAE LSDVLEPGIGNTAEGQSYNQG" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1352751..1354301 /locus_tag="Silicibacter_1277" /translation="MLPGTVYVDRPGTGIFAVELGPSGAGALLNERGKRELEMVSYGP RQICLQEECVNVQIEDDRLALYKDNSDRLEGFLIYIALGRFTSPLPLAPVKDAQQSQE IANVDVSNAEAKLDIYDTAESTGKAMDEALASEACTDGALFYGTSDCKAAMERAVSQD IGRIVSSATGPTNAENESQPVLDLPEVEYLWFGRSADLQVQKLGTRDKRGQTRVDFEN GSPRIGGRILIPSFVPDSARIVAVSEALALIRFSGSLLPKGCVEAYRWLWVQASDHGV LSEPFGACTAAEDVEVHYEGSRVVTTITPEEGIPSTFEIFPYRSDDIDPLRVSVTSGP SVDFEPVSEEDWKTIERRAAEAQRIATAEAAKEEAQIREADMQAEKEAALARRRQPAT PTGKLDDGNVFDILAQDSVQSAIAASDDAKIIQKALSDRFYETVYLPHNKHVGDIYVG LSCGPSGCAELMAGAIYNRVTQDAFGFVQIDFETYRFGSEGWLMADPSAQVVTDTLSK MVKAIPAE" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1354867..1355121 /locus_tag="Silicibacter_1278" /translation="MFVSAADGYSALAKELHRQNTMKFMTILAALALTLSAPAFAQEA KGTEKQSAPESAADTQERSTGNGRGTRNTASTTRNKTPLL" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1355309..1355878 /locus_tag="Silicibacter_1279" /translation="MKIHLNEPDRLILRGTTSAISAVLCSILLVVVGLSVSAAIAGYT ASWGVAAGAVCIGGGILWLVYHKTEVVFDRASDVLTLRKTMLHGTREDTITLENVKQA DVDLKRNERSNNRLHASYTYRLCVVTGAAQNRHRVALSHGYTTSRRHLVMAQKINDWL GVPDAPIAVGPSMADVAEVIKTLGFGKST" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1355912..1357084 /locus_tag="Silicibacter_1280" /translation="MSQFTETTQVGLFARLKNAIKGIGLGISFIGIAVYFLFWNEGNA VRTARALAEGANQVVSVDHTAIDPQNEDRLLHIGGPLALEVPLADVALGVVASAQTVR LERKVEQFAWIEDKQTKTETKLGGGQEKTTRYTYRQGWTDAPASGAEFRVPEGHMNPP MPIASKVIRQPEGTIGAFTVDDEISDLGGSTPMLLDSQQAEDVARALSLQQPAKLVAG QVVFGADVTAPQLGDIRVSYRVSEIEEASVVGVQRSDTLLPYTAQNGRKIYLVAEGLK TADEMFQTAVSNNTFKTWMLRIGLLVLLFLGFKALFGVVDVIASILPFLGWITASVTS LISVALTLVVGGTTIAIAWVYFRPVLALLIIAVALAGAAASAYWLRKAAPETPKTP" /product="zgc:85946" /transl_table=11 /note=", Protein of unknown function (DUF1625)" /note="Hypothetical protein" CDS 1357118..1357585 /locus_tag="Silicibacter_1281" /translation="MKQIYLSIALMFGAGALQAGQFCELDGTEMFTCTLKGGTRGVEV CNAVWADGTKAAYGFFKSNGAVEKEILQDMATITASPWNGMGNFMTESVTFDAGGGYA YEVWWGSERAADATEMGGVNVLKDGALIADIPCDAGSVNSDLSSLIELIEAAQ" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1357597..1358418 /locus_tag="Silicibacter_1282" /translation="MLPRTLSAAVMMMTATGWSGTANAQPVCGGEVLFQCATDNADFR EQITVCAKDHSYILTRHALASGEMYYDTPLIADANTTWFSWSEDDQLRLEIGFWSTDL AEPVTLHASLPWDDMEETLAATGEYSMWLQSPHWRAQVDQTLCAPETIYADPEALWGA QDTRGPIAAFFSQDEIIPRVNTVGVARVADTSGHLEGLPVYAAARPSAATPIWWMLQP GDIVDIIDRENDFVAVAIPTLGMTECFLRPEALGQPYNGPCATGWVDGAYLQQIQ" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1358390..1359037 /locus_tag="Silicibacter_1283" /translation="MAPIFSKYNNTAGMWRVVPFASSQAHAPRLFKEMTMKALVLTAA LTCTAGTASALCEDAWYLRNMAFDRAGYCFGSALGKSVFSAECSTKSPSLNDWDQRMV SAHKQLEASYSCKINTKGRHLASSLVGKLDDIDLLPTLSQFESSCVGYTGAPVTLTSG IGMRDSYPTGTIQGGATVHFRFEPWGGFEFVETETGAGWIPEGSVTPDVCTAFAG" /product="hypothetical protein" /transl_table=11 /note="Hypothetical protein" CDS 1359046..1359462 /locus_tag="Silicibacter_1284" /translation="MRSKLLCFLAFAPVVGHAECLPPETQALSCTLPSGGHLELCWTP QNARLAFDKEPGVPAEVSVPLGNVTGLTAADWASSTLRGVGAGYEVYVSGQVAGMNLI RDGGGTSSYTCATGTVNGSLAELNEAALYAPASKEN" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1359465..1360373 /locus_tag="Silicibacter_1285" /translation="MRSFLTKFGVSLLCSAGMAQAFCDDILATQVLCLTEDADEIKVC SSQHPEIGDPVLELHVTPQISDGPIYRLAADVPFGMAPGTGGFPWDVHEFSFLHEGGR AVLSVKTPMDTDDTSDAEIWLDLFGRGTAPDRSLSCMQPALSAEIENLLALRRVSMNT MRTGPSADSAPFYQPSKPISGATPHGSYNCREVAGVLSNEGTENGQIALFAAPSDEAA ILGYAFPSDLGSAFECVSEDGFSGIIWVDPDKGDGAGGYMTQLDYEARLAACSMTADD WPQDRAYWGNCSSAWVKQGNIAGFGG" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1360379..1361410 /locus_tag="Silicibacter_1286" /translation="MKRYFIVASFAVCAAPAFADCEGGGTQVFYCDTENASRVQVCLQ NETVQFLGGPDLSDPVYDLSMPVQFMPYLSTGIAQSEEDFSYIRFYEGERVFTVGLDR DLEFASAALGLASDFLPANEEACNPDSIVDNFQVLDQFALTTGRVAPVVSFPEVSPNC GPIHDLRPADWMEDKSVTPIHLGPEEITTEVIPVDQNVRACGAPVEGWQGVRFQSYGF ECDLNAPDAIGAVCSSGYVRLSQLAEISGPASELSRPQALACQAGGFRFVMARADNGA VTIENEQLRMTLSPGSGPRTTTDTGSEQVMRLNDKLKLSVSYDTLELNVSHSEQGQQS GICVPVDLS" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1361498..1362280 /locus_tag="Silicibacter_1288" /translation="MAFNRALATTVALILSHSAVSAADLAIIGGANFSQSSAQIRATF EAEGYRCERMGVMDPDDGKLDEKGCALWKDEFSFSSSDTRVMWTMRYQKDNEMRILVL GEQQGLDRVLMLGQATFFEDAAIEMSSSEFLEDRLAVFFEVTPTFGTFDTSEDALDLC FLMTEDITVLTPAGLPSSALEENQRFLGSPISPAAILCERWMNRKRDAVVDFARSDAG PAYARKVVYYADGGKPQQYMDMLWNVPAVVGWSLAPLQVEGK" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(1361407..1361508) /locus_tag="Silicibacter_1287" /translation="MKAIKAFLENGLKNKALPRLYPQQRQISDHFET" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1362558..1363358 /locus_tag="Silicibacter_1289" /function="COG: DNA-binding HTH domain-containing proteins" /translation="MYAPLDLIRDITDAPTLDAKYKVFSGFMEAEYGYVGVNYGLFLD TRSLHAIHNNHVSKRSGLPNEWREIYQRNNYALDDYGMRMGALTRKPILQSSFYRALD ANELPENFARVVGGVRNFVSSGVVIPLQANGMRGIIGLFDPSGDILKHDARFERDRTT IQTLANYLHMCSDWSDDIIVQMGLSEMNLKVLRLKAQGLRMKEILYEIQRDNPKTIHS HMQRVRRALGTRNDMETVQRAAKLGLLKEDSFPVHQVSPQLYDALGLR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Bacterial regulatory protein, LuxR" /note="Hypothetical protein" CDS complement(1363509..1364588) /locus_tag="Silicibacter_1290" /function="COG: Type IV secretory pathway, TrbL components" /gene="virB6" /translation="MSVVTYFVETSQGYLDTAAETQFGSVAATVGTLLVLGTTLVVIL VFVNMIYQYKAMDGRTAFWLAVKIGLIGIFATNWVQFNALSSAILAGIDSIAGALVAS VGGGTPGPSGTFSEEFDRLIAELGDYLNAAGSELNWMAGAMLDIVGVLLLSILGGLAA FILVASRLMITLLIGIAPVMIFLTLFEVTKDYFARWLSALVSFALYPIVVAGVFATIT GVSSALIGELGDPEGAPNIGALIPFFMMVLMAKGFIIATPFIVRAISGNIMMPALSGG LSGGYSFARAAMGSQQAYNRYLTGGASGAEYAALRARQFFGMQALPSRSNSAGRPTDV PASSVTGTGTRMLAQLSRLGRLGKR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="TrbL/VirB6 plasmid conjugal transfer protein, homology to virB6, belas" /note="Hypothetical protein" CDS complement(1364601..1365014) /locus_tag="Silicibacter_1291" /translation="MRQVGCTLVVTALVLGLTSASGFAERNLVPTLERSFDVCSDRPA EPVWMQEIPLRQAYQRVLVQDIYRAMNLERIVETESCDCETRFPSWDAAEAEFHEQHA SDERWKMLEASDAYNRRANDVRLEAKAICETAGNW" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(1365011..1365205) /locus_tag="Silicibacter_1292" /translation="MKTFEYDILSFPLTRKTSLADMRVSLSVKGAEGWEVVSISSSEF ANVGHTVFLKRETTPAGATV" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1365202..1366188) /locus_tag="Silicibacter_1293" /function="COG: Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis" /gene="virB11" /translation="MSLSYLQTSLDRIDAAARDDVIEICINPDGSCWGEFQGDHFMRK LDQALTATEVKDLGNQIASSANTTMSKDRPIVSVSITYKGRPIRAQVITPPAVLSAMS ISLRFFSSLPLDGIALDFLYGKERKLEKLRLKKTRELREVVAAGVIDDALAFCVDNKL NMIVSGGTSTGKTVAARKILSHVPADERIVTIEEAAELLPTQPNAVTLIANRDAEFQT ADVLLTATLRMRPDRIILGEVRGKEAMTFLEAINTGHGGSMTTLHAETPQLAVQRLAI AALKTEIPMTYADMIQYIENSIDVIIQAGRHDGRRGITEFYLPGATEIGVSQ" /product="VirB11 protein." /transl_table=11 /note="Bacterial type II secretion system protein E, Type II/IV secretion system protein, homology to virB11, belas" /note="Conserved hypothetical protein" CDS complement(1366193..1367638) /locus_tag="Silicibacter_1294" /function="COG: DNA segregation ATPase FtsK/SpoIIIE and related proteins" /gene="virB10" /translation="MGVEDRGRGGLYRGHTTCGGRLMSDTGNADLEKRLAALEQGKGA GSPPAPRRSPLLALVVVLVIGAGGALLYLLSRPEEEEALLTATPDVFQNEGDGFGAIE TLPPREPEVVFVAPDPIEPNAELLARITALQAQIEELRNAPEPVVEEDTAAAEAIDAL TAQIAALQTASEAAQQQFRDELTARDRELEQLRMDLELAQLEANRPLPAPIGPTEDEL RAREEERLRREEEARRLAELERRAAEERAFQERRITSPTIAFGGTSGANETALTERTF GEVTDFVLNGALPSTVTQAEVIANPSNTIIQGTMIQAVMETALDSALPGQTRAVVSED VFSFDASRLLIPRGSRLIGRYRSGVDIAQRRVTIAWDRVILPDNQTIQISSFGGDELG RSGVTGFVDTRFDERFGSAALISLISAAPSAAAANVQDETAADVLEDVGDDLADATDS VIGDYLSIGPVIYVDQGARVTVMVDRDLEIF" /product="Probable conjugal transfer protein trbI." /transl_table=11 /note="Bacterial conjugation TrbI-like protein, Bacterial conjugation TrbI-like protein, homology to virB10, belas" /note="Conserved hypothetical protein" CDS complement(1367569..1368264) /locus_tag="Silicibacter_1295" /function="COG: Type IV secretory pathway, VirB9 components" /gene="virB9" /translation="MFPVRLFFLLIALLPGLALAEAIPRGGPNDNRVRLATYQEGQVY RLNVSLTHVTTIEFGDGESIRSIIAGDTEGFEIDGVPGGQAFAIKPVARGVHTNVTVY TSRRSYYFNVQEVRSPTFYVVQFRYPEDDTRPTRAIAAQAPNYNYGASARTEFTPTRV WDDGTFTYFEFPRNAPVPAIFRYANGRERTVNTQATENGVIRVSGVNRQWVLRIGEEV VCIEATPPAGVGS" /product="VirB9 protein precursor." /transl_table=11 /note="Conjugal transfer protein TrbG/VirB9/CagX, Conjugal transfer protein, homology to virB9, belas," /note="Conserved hypothetical protein" CDS complement(1368267..1368920) /locus_tag="Silicibacter_1296" /gene="virB8" /translation="MASEQEIIEEELVYGALRRERLWQRLGLIGLIFGILGCLSAATV AILDVDPPPVVVPYDPATGFALPEASVGASSVTANQAIIEAEVFRYVTDREVYNQLDN DLRIRSVLRRSDGAAESRLRQIWNSANENYPPTVYGPNARLDVEILSINRIGTNRATV RLRKRLTSINGVQTGLFTATLLFEFRPETRRSIDEVWTNPFGFTVLEYSIRSDRLEN" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="VirB8, homology to virB8, unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(1368937..1369746) /locus_tag="Silicibacter_1297" /gene="virB5" /translation="MRDLLVRMALATTLGIGLHLGTLSAAVAQGVPVVDTQNIAQNIQ QLRQMIEDEILQNEQLTQLREQLATLTDQLAELQRTYEALTRLAELPEIIRTEMEDEL NGLLDQEFGDILATIEAIKTGDFSDLSGSGAGEIETQMDRVLADLGFDDDTLSEMATS GNPGANRVATQATTGALVSAAAQNSYEDAGQSLERVDRLVGLIDDMDELKESIDLNTR VTAELAIALVAMWQLEAVQTVGDGTGGVIDAATIAEEQRFMDFTLPELRAD" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="homology to virB5, unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(1369746..1370900) /locus_tag="Silicibacter_1298" /function="COG: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)" /gene="virB1" /transl_table=11 /note="Lysozyme g (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase)., SLT, Transglycosylase SLT domain, homology to virB1, belas" /note="High confidence in function and specificity" /product="Lysozyme g" /translation="MKSKLPHILVLCLLPEIALSQGVPTNDSGLTARDIVETGDREAD LAIQANKLSVRELIAEIEREQLETLQRILDAQTSFGGQGLPAMVSGLENGSGDPARSV EAVYGNAEIDPNPGGAQMFGDAAENIEQLIIRVAQETSGFAGVGRAGLSPVQWRALLQ ALIWQESRFTIGARSPVGAFGLTQIMPGTASDLGINPEYYDSPYLQVHGGARYLATQL NTFDGNIINALAAYNAGPGRVFEYGGVPPFRETQHYVQVIPERYNLYLGRIGGIEALG TIDPALLANANLSLTGHGAAFYGNNSPAAIRQAALRIADIVERISDTEDVQESIALNT YARAEIVRLVAARVRLQAARTRLLSAEELAQASARMAKGAFMDFTIREID" /EC_number="3.2.1.17" CDS 1370900..1371004 /locus_tag="Silicibacter_1299" /translation="MPPSGAPTGVKVQSGATGAVEARKVKQFAFGSWY" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1371054..1373429) /locus_tag="Silicibacter_1300" /function="COG: Type IV secretory pathway, VirB4 components" /gene="virB4" /translation="MPRDDARKDALDLRTMTPDWYSRETRLAHMLPYVSLVDDQTVRT RVNELFQCIRFDGVNSYTTDDTYLDKVTALFARIIAQLGPEFSYYVHKVSKAIKPDLD PIRKDSFAGEVDRLWRKKLETSGLRDKTLTLTIIHRPPPKSVLPFLNRSAPNRLKKAT EKRLRRLGEAVNVFLSGLSELNPRILSAETGELIGFLGALNTGQELPLYPANTYGFLS FNAANTRVTFQGDHFELSEGVVGHRYGKSFTIGEYSEGTSCTMFDMLNLPVDMIVTHS FTPINSNLMAGRIKRQKRQMQASQDAALSLMEALDIAADDLEAKRQSFGEHHMVVTIF CDTLDELQTLSAEIVNAAAAEGVKMIGERVAAKAHYLSQHPGNQPKRVRASAITNRNF ADFAAFHRTQLGKPAGKTPWGKVITYLPTPEQSAYRFSYHEQGSPEKEPTSGHTLIMG RPGSGKSVLSAFLMTQARRAGARIFVFDYRLGMEMAVRANGGRYASLKAGQPTGLNPL WTETDARGTAWLSDWLATLLYRADKPLTPAQTNRIQEVVRQNAQATNPALRNWRDFAS LFVSTDDGGDLHQRLLEWTEEGRYGWIFGQTLEDTFSLEGDVVGFDLTGILDSEAEKE RMAVLSYLFRRVEREIEDRRPTIIVIDEAWKALDNAYFAERLSNWLVTARKQNTVAVM MTQYASQLERTRTGKTIVEAVPTQILLPNIRAHAADYAMLNLYEKELDVLLNTGSDSR LALIRDDQGSIVVDADLSALGPNLTILGGMETGEALVGSDYRNRPDFWRLS" /product="VirB4 protein precursor." /transl_table=11 /note="AAA ATPase, CagE, TrbE, VirB family, component of type IV transporter system, VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family, IMG annotation suggests that there is another ORF upstream of virB4,, between it and virB2, that has homology to virB3....this gene is, missing, Belas" /note="Conserved hypothetical protein" CDS complement(1373419..1373697) /locus_tag="virB3" /gene="virB3" /translation="MAERSPLFLGLVRPPKLLGLPIMYAMVWLFGSVLLFVWIQHIVV LGVTAFLYPVLWKAADWDPRFIDVMMTALQETPPTRNRSIHGGDSYAP" /transl_table=11 /note="gene product has homology to VirB3, belas" /note="Hypothetical protein" CDS complement(1373690..1373983) /locus_tag="Silicibacter_1301" /gene="virB2" /translation="MKHISHLFVASLALFLLIAEPALAQSIDLSPIQSLLQGIVDALT GPLGVVIATLAVLGVFLSWFFNIIDLRQALWVLVGIAGVAAAPTIVAAVFAGG" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="VIRB2 type IV secretion, belas, ," /note="Hypothetical protein" CDS complement(1373980..1374966) /locus_tag="Silicibacter_1302" /function="COG: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)" /gene="yjbJ" /transl_table=11 /note=", Lysozyme g (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase) (Goose-type lysozyme)., SLT, Transglycosylase SLT domain" /note="High confidence in function and specificity" /product="Lysozyme g" /translation="MWLRKHVSANSWKAAIALKSSAKSRHIRRARVTTGFGLCAPSLT RALKSFSSLPVLARPTTTSRSVSLKPSRAWSLSSLALASPMPMSRSKKASGQHTSWLR PTKAAASSLLLFWFLAGSTSAQMVLVMESDGSLTPSRSQDSFARNYNDGIGQESAADE LAILGETDLGPDEIQLAALARPVPLPRADVLTAIETTALRYAGHPGLRRAGLSVTDWL ALYRANIEVESAYRQDAISSAGAIGLGQLMPATARDLGVDPRDPLQNLDGSARYLAMM LQSFSDPRLALAAYNAGPEAVHHYGSIPPYRETQNHLTRVMTVVARLKAPNS" /EC_number="3.2.1.17" CDS 1375159..1375455 /locus_tag="Silicibacter_1303" /translation="MIENLRLFLSAIARLLAFLIPAMVAGQAGSCLAPVRPFVPSDSQ ASSDFADIIRRDFEAYIKDVQQYFHCLERERARAFEEAGEVSQDYGRFLELVGD" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1375544..1375693) /locus_tag="Silicibacter_1304" /translation="MMSAFDCQFCLAEVRFIPDLEQRQTQSLLTFASDCFRHAPHVFC DVAFQ" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1376611..1377315) /locus_tag="Silicibacter_1305" /function="COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /gene="fabG" /transl_table=11 /note=", 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (3-ketoacyl- acyl carrier protein reductase)., Short-chain dehydrogenase/reductase SDR, 3oxo_ACP_reduc: 3-oxoacyl-(acyl-carrier-protein) reductase" /note="High confidence in function and specificity" /product="3-oxoacyl-" /translation="MTVEKVALITAGGSGMGANAARKLADDGFKVGILSSSGKGEALG GELGGFGVTGSNLDGEALNELVEGAKDRWGRIDVLVNSAGHGPKGPVLEISDEDWHQG MEVYLMNVIRPTRLITPVMQAQGGGAIINISTFAAFEPDPLFPTSGVFRAGLAAFTKL YSDKYASENIRMNNVLPGFIDSLPETEDRKARIPMGRYGFASEVSSLISWLASENGGY MTGQNLCIDGGLTRAV" /EC_number="1.1.1.100" CDS 1377414..1378292 /locus_tag="Silicibacter_1306" /function="COG: Transcriptional regulator" /gene="gcvA" /translation="MTELPPLNSLRAFDAAGRRLSFRAAADELGVTQGAVAQQVRQLE AHFDVVLFERVPKGLAFTPVGRSYHNRIAGVFADLRAATAELKPEPNKVLISVTPTFA AKWLIPNLPDFATAHPNIDLRIMATEKVSSFHSDGIDLAVRQGSPPFGASLDVTLLFK QSLVAVAAQKLADKGGTPLDPETLAKQPKVHDAHDLWPSYLAHLGVQDQSARHLRLSQ TSLAVDAAIAGQGVALVSRFLVAHDLAAGRLVEVGEAWAPDRNDFYVLMPRTAKNNAP TTNVLTWLKSRSAKDT" /product="Glycine cleavage system transcriptional activator" /transl_table=11 /note=", Glycine cleavage system transcriptional activator (Gcv operon activator)., LysR, substrate-binding, LysR substrate binding domain" /note="High confidence in function and specificity" CDS complement(1378450..1379145) /locus_tag="Silicibacter_1307" /translation="MHYLIKKLLPSVAVALTVTGLSLPTPARAQTYPIDCAILLCLSG GWPASVPCARARAEFIRRITPWPVEPPLQIWRCPMGASYESDRQSNNAGRIFEALYRP DSRQPLQSLRVDDVIPTDRALRLVQDRADIDISGPEFNFVRSIRIFDVRYARQHESGR NSDCNRSATVVLGTYGIQGDFSWQRSSITALPEAHVGLERWGQNCPGIYHRSVFVDWR DYEGNYGFEQVNY" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1379794..1381074 /locus_tag="Silicibacter_1308" /function="COG: Glycosyltransferase" /gene="mtfA" /transl_table=11 /note=", [EC:2.4.1.-], Hypothetical glycosyl transferase Rv0486/MT0504 (EC 2.-.-.-)., Glycosyl transferase, group 1, Glycosyl transferases group 1" /note="High confidence in function and specificity" /product="Hypothetical glycosyl transferase Rv0486/MT0504" /translation="MSSPNTMVKPQIVFDLTEVLLASTGKLRYYGIARVAAEAGIALR KLDASIRFAVFSQGHRGLLEVFPEIREDGSVELNVPAGIRQIRMRSHHYSRSKLRDLI LSAIRPLIDRKNRLFWDEIAPGMPQIEMAGKTFVTCSRPKVITEILCAMAKQGVSCDV IPMLHDMIPLHDFHHQRASFPKNFVGDNRFVIERAKGLLSVSEFTRQEIIDFSQSDVL PAVPEIIAVPLVHQCPIGTEPAEQAPPDTPYILTVGSMLGRKNLDVVFEALRVLQRTG SPLPKLVLAGAPRGRTRTYVASAECDSIRDLVLFYENPNQTDLVTLYENATAVIMPSR MEGWGLPAGEALWCGTPAICSTAPVLEEVCGDLGLYFDPDAADELAEYIRRLLTDSAF STKLRMRISEHKSKLRTWDNVAEDIVAAVSRLSR" /EC_number="2.-.-.-" CDS complement(1381136..1382569) /locus_tag="Silicibacter_1309" /function="COG: Glycosyltransferase" /gene="wbpX" /transl_table=11 /note=", [EC:2.4.1.-], Glycosyl transferase, group 1" /note="High confidence in function and specificity" /product="mannosyltransferase" /translation="MQTYYFDITDIVLYVKKETTISGIQRVALEVIRRAVGKLGSERV KVGMWDKGSQSYLAMDADFLLEREEFDPDFLAAALLGKAVRKVQTVPSILTRYRNQRA KYLYHWLRANLEEYKRNHRYFERRGTTLEGWVLEKERAHRNSKELPVLAPAASVQKRV PLEDVAQSGDRLIILGATWGLQDLNDHLIELKEKLGVEVDLLIHDLIPLVASEHLADD FSETFYRWLEGSTLYCSRYFANSQNTGKDLRCFLSEINSDLPIDVVPLAQALGDGPAA LDTQSFRSKLNATKGVRRSFLNMTKVPYVLVVGTLETRKNIWRLAQAWQQLIQDPQVE PPRLIFAGKKGWYIDEFLDWMKASGNLDGWISIADRPTDKELAFLFHNCVFTANVSTY EGWGLPVGEGLSFGKTGVVAENSSLTEVGGDMVEYCDAHSISSIRDACKRLIMEDGRR TELEQRIKNTQLRSWDDVTNDLLEYLN" /EC_number="2.4.1.-" CDS complement(1382652..1383971) /locus_tag="Silicibacter_1310" /function="COG: Membrane-fusion protein" /gene="aprE" /translation="MDNLQMRDKISRYSSPQRFSRIGYAIVILTFGVLGGWAAYAQID SATVAPGIVELEGNRKVVQHLEGGIIQTIHVKEAESVSQGDVLVTLESVEARSNVERF RNRLEEAMAIEARLLAEQALSEEIDYPESLTSNPSPALKNVLDLQSTILADRLAIFRS EQEILQFRIEQLEGQKAGLALQKDAYERRLKLQSELVERLTRGAESGVIENNVLTGRK DALIQVEASLGEAISDEAQVGVAISEARLNRLKLSQEFKERANRELRDIQTDLKEIRE NLTVAQDIYYRTEIRAPSDGVVQDIRVTTEGSVIRPGEILMEIVPPDDNLLIASRVSP LDIDNVVPGQESEVRFSAFKAKLTPVVLGYVESVSQDIITPERSDEEPYYLARVRVPE ENMSEEMRQGLTAGMPADVVIVNGERSVLNYLVSPLTDAIALSLKEE" /product="Leukotoxin secretion protein D." /transl_table=11 /note=", Type I secretion membrane fusion protein, HlyD, HlyD family secretion protein, type_I_hlyD: type I secretion membrane fusion protein, HlyD family" /note="Conserved hypothetical protein" CDS complement(1384034..1385749) /locus_tag="Silicibacter_1311" /function="COG: ABC-type multidrug transport system, ATPase and permease components" /gene="hasD" /translation="MMKSGSSLAQAYAKYRSILAATVVFSFFVNLLMFVGPMYMLQVY DRVLASRNETTLVMISIIAVALLISYGLLEFTRSRMLVRAGLQFDQVLASPLFSRVVR MQLANPASSGRNALSDADRVRDFITGQGVLSFFDAPWTPLFLVLCFAFHPWLGAVATV GAVIIFALALLNEFMTRQSLQDANQAGAAASNFAGATLQNAEVIRAMGMVDQLLNRWL GKRDEMLAAQARASDRAGIVLACSKFVRMTLQVAILGVGAYLAMKQQISPGIMIAASI VMGRALAPVEQAVGQWKQFVAARQANDRLKKLFDSLPDETDRTELPSPKGKVSVAGLT SALPGVKEPILKGVSFDINPGEVLALVGPSGSGKSTLIRHLVGVARASVGKVSLDGTD LQHWDPKQLGHSLGYLSQDIRLFGGTVAENIARFQEDAEDSEIVAAAKLAGAHDMISG LSNGYQTEVGDGGSQLSGGQRQRVGLARAIFRLPAVVVLDEPNSNLDSEGEAALAACL EQLKAMGRTVIVATHKANLLSLSDKTLILNAGSVQRFVPTKELLQPQPPKAAHPQTVS AVTSR" /product="Toxin RTX-I translocation ATP-binding protein" /transl_table=11 /note=", Toxin RTX-I translocation ATP-binding protein (RTX-I toxin determinant B) (APX-IB) (HLY-IB) (Cytolysin IB) (CLY-IB)., Type I secretion system ATPase, PrtD, ABC transporter, type_I_sec_PrtD: type I secretion system ATPase" /note="High confidence in function and specificity" CDS 1386988..1387080 /locus_tag="Silicibacter_1312" /translation="MTFANFANYPALNKCTASNKAMHHGASVLW" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1387066..1387263) /locus_tag="Silicibacter_1313" /translation="MNDNPTVTVGGKECLLENLSGEARAPLANVQMADQEIARLNTQL TLVQTAPNAYALALAVELPKN" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1387283..1388818) /locus_tag="Silicibacter_1314" /function="COG: Methylase involved in ubiquinone/menaquinone biosynthesis" /translation="MSDWTAGYVADIGYTYGYYTELNPVRIQLAFLNAGLAPPRVGAA CELGFGQGLSTNIHAAASVTTWHGTDFNPSQAGFAQELATDCGNGAQLFDQAFDEFCA REDLPEFDFIALHGIWSWISDENRAVIVDFLRRKLKVGGVLYISYNTLPGWAGFAPMR HLMTEHAARFGTNGQGIVSQINGAIEFGAHMFDLDARYTKAVVGAKERFDKLKEQDRH YLAHEYFNQDWLPMYFADMARWLEPAKLEFACSANYLDAVDLINLTQEQQDHLAGIPD PLFRQTVRDFLVNQQFRKDYWVRGARQLTALDRSEALRECRVILTVAVEDVPLEVTGT LLKATLQDAIYQPILKVLGDQKPHSLGQIEAAVASEGVNFAQLLQAITLLIGAGSVAP ASDAEASSKRKKQVQRLNTKLMLKARSSNDLRYLTSPLTGGAITVPRFQQLFLLAKQN GQKIPEDWAKWVWQVLAAQGQSLVKGGKTLQTPEENLAELTTQAEEFETKALPVLKAL QIA" /product="Hypothetical protein sll1526." /transl_table=11 /note="Conserved hypothetical protein" CDS complement(1388910..1392191) /locus_tag="Silicibacter_1315" /function="COG: RTX toxins and related Ca2+-binding proteins" /translation="MAFWEGQLSSGAVSAADAIDAIIKGATTAPDSTILTNKNAVGLD FATDAGNTPGFTFDLNGASGSAAKNALAGVTDDAATVTAAQAATDAYLSGVAGAGDTL SLTTGVDNITGTVNQDTIKAVVGAGATLSAADVVDGGAGTDTLELVDATGGQSLAAAL LNVSNVEELSIRSVGQAKADTSGTAFTSVNITQATSVDADVNAATNVGVSGVTGAIAV DGGKDITITDANDGANITVGGATAVTGAVTVTDTKVGNAAIEVNGGTTVTVNATGSSA NNIKVGGATTTDQPSGAVSITSAHAATAGKDVTSSAITTVGGSSVTITSTADTSKAAA DTKGATLTQGDVSVTGGASTTEVTVNQAANVSKNAAVVAVAAKASTQKLTFTNAAAND VITLTFDTGDTLVFTASKALTATEVATAFANLAKNATEGSAPVVNGVYTNGGTIDQGW TSGAVTDVNADDTSASVTFSNEAAGPTALVVANGGTGTATAATLAAGTAATAAETGRL GVIAGKVTIDGNITGDDVLKTVTIDAYEDGSTVKSDALETLTLKNADEDIVVTTASTG AITLNLDAVAGNDAKVSLDGNAATVTGLTINATGTKSDAEVTADAATTVTVNAAVDMD LTGSSFDKATKMVVTGAGKVTLDGDDVASVLAEVDASGATGDVDASGVALTAAGVYTG GSGADTFTVTAAATKASTGGDGDDVITVSTLGTGGSVDAGAGTDTLVMAADDAETASA TAGFKATNFEKLSIGAVADATAGADTETVNLANLAFTEVTSAGAVDGDEDILALTNAA SGLTLNITGEGLFTVGVKDAATNKTDVLNIASNSDGNLALGTVTAANVETININAVDK VVDTTGATDAFGAAIGDGKDDNNSVQTLTVDAGAATTVNVSGSADLDLTVNTATALTA VNASTATGAVTYTANDGTTTVTGGSGNDNLTAAGDSDVLLGGAGNDKLTAATLTTLTG GEGNDTFVMSGAVDATKYSTITDLSSGDTIDTDATAFNSSKVVLAANATFAQYLDAAI VATAAQDDAASWFQFGGNTFIVNEGTDASVTYNAAEDGIIGITGLVDLSAATFNATNG TFDIA" /product="Outer membrane protein A precursor" /transl_table=11 /note=", Outer membrane protein A precursor (190 kDa antigen) (Cell surface antigen) (rOmpA) (rOmp A)., Serralysin-like metalloprotease, C-terminal" /note="High confidence in function and specificity" CDS complement(1392302..1392475) /locus_tag="Silicibacter_1316" /translation="MAISAEDRDFLVSLYVGYFNRAPDPAGLQFWIDQVEAGRDTNTI AADFAASPEAKSL" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1393360..1394940 /locus_tag="Silicibacter_1317" /translation="MVDRSSGGLSHLPNQTAVTPDWANQEIASFMRAHRLLAIAGLSL ETERGVTDEGDPWFVFVNQDGDVFAHFARIGEVYILDSIIQQEITKARSLDELISAFA ETTTPVDSVDHASTSATVVPFIALRESKVRLHPGATLAALIWTIYIQSGELAVPSFSA ALDVTATSKADEVTTLPSQTRASPSEELATSTSEDNSADLKSTEKDTHTQTPSSAQVA ATFTTVQTVGMGLSAIAISNGMYFWVSGETLLEQATLASQLVAEVIKDISDEETEQLA DLSELDSVLSTVRAAIEDSSEAMALAQSPIRDIPTVDLASMPAIVANAVENGKVGNAI KAKDVQGDVAFSEEMDGELIKFRDIQANRPEEIETSQIRSTPVDIEKKYILQELDEVE HFSLTSDAFSNIATQLSDLPFFTQMLSGSFQAVVASEGSQTVPASRPDTLNDASETAP RFSIFNDDAHNFIVFLMSKGDETKRSDYDNEVVLFDFDAIDSQTDAIYARSWSFEDGS VISAVGLKSDFAAFDLVI" /product="hypothetical protein" /transl_table=11 /note="Hypothetical protein" CDS complement(1393387..1393569) /locus_tag="Silicibacter_1318" /translation="MREYVSILIYENKPRVTFVGHSALCFQGETRNGKQPMCSHEASN FLIGPIGCDCSLVREV" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1395149..1396432) /locus_tag="Silicibacter_1319" /function="COG: Glycosyltransferase" /gene="mtfA" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" /product="probable mannosyltransferase A (MtfA)" /translation="MVKSAKLRIHWISPVPPAETDIAHYTHRILPELAEVAELVLWTD AAEWDWNLHNIAPVRHLDPDRVRPRDFALSGRAGRGPEPGPEVVFVNIGNAWPFHAGF LRMIQRLPTIVVLHDMAIQELCFDAMERSLLDQDVYLENMRRSHGQAGVEAAKLVLGD EMEAGALARTYPGFELALTHAVSVVTHSRVAQQSVDTVSDTPTYLLDLPFRPSLRRPE VYRSGLGPLRLVQFGYTGPNRRLESVLRTLASLKHEVDFRFDVMGKLWDTGYLRNLVN QLGIEARVTFHGFVDESFLDQKLQQAHLVFNLRSPTMGEASGSQLRIWNACAASVVTN LGWYADLPDETVFKINPDREAEELKSIVRSLYADPSRGNRKALAGRERLEQIHNPARY AAAIKKVAQNFSQDAAHSLLGSRCSFPKCRTLDQR" /EC_number="2.4.1.-" CDS complement(1396432..1398840) /locus_tag="Silicibacter_1320" /function="COG: Glycosyltransferase" /gene="wxcC" /transl_table=11 /note=", Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2)., Glycosyl transferase, group 1, Glycosyl transferases group 1" /note="High confidence in function and specificity" /product="putative glycosyltransferase" /translation="MRVGVLRTQVPFVSGGAERHSMGLVNALEARGYEATEITLPFKW YPGNVLADHIAAAKFLDISEVEGVKIDLAVGLKFPAWLAQHPNMVLWVIHQHRQAYDM WEAGTSDLLDDPQGEALRALIHEEDRAAFLASPHPIYANSCNVADRLKRHLGTAATTL YHPPPNAELLRQGDYGDYLFAPGRINASKRLELPLRALVHAPASRLIIAGVAENPAYQ KRLYSLAHELGVSGRVEWLGRVDDETLVRYYANARGVVFTPQDEDYGYITLEAMVSGK PVVTTKDSGGPLEFISDGIEGLVVDPDAKALGDAFTFLSEDTATAERMGQAGYMCYAQ CNISWDHVVSTLTGQAHLPVTFDAVQKIDAQAPEHGHEVCTEDAVRQLRAAVAPPSRP DNVPFANINELLEAYAFDELPAALGRDEPPIDAGLSGYLGTHWTRFMSTLRQLEGLEI SSALDVGVFPPLVFQALLANQFPNIDLHGLWEGPNPYAQSVRPRPGYDVDGFEITLKV ANGERDPWPYPDETFDLVTGMEILEHLALDPYFFFCEAARVLKPGGNILITTPNVNSH RGVWKTLNNVAPYSFGIFVPSGGVYGRHNREYAPTELDMLGRSAGFETVRLQTFDVYD RHIEPELANLLVSRRDNLSLRGENIQYLAKKVGSPKGVPQSLYHGDPARMHGELQVVT HEEETGLLTISVRNTSYSIWPLEGDRATCVLAEWVDEAGVLRHQHLMQPLTEVLSPGD EGRIRFTLDAQKQNLGVLRLHLYQSGVGVFSGRGRAVPLSIPCSHSAFLTLVDKTPLP RAKV" /EC_number="2.4.1.-" CDS 1398879..1399037 /locus_tag="Silicibacter_1322" /translation="MRPEHQLRQLIVEARSIKELSQPFMWIDVSDIDGLKPCRFEQNP HHLLWHWL" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1398840..1399895) /locus_tag="Silicibacter_1321" /function="COG: tRNA and rRNA cytosine-C5-methylases" /translation="MKVIKRLERYLSAAFSLGRIKSMSKDAQREIAELRLELGTLSQE LKHTRQETERMWAWMRRHEALADDLVSVSRREAEVLKRTGQSDTALLLRMFSDLSRRI DGGESGRPDEKAPSSNGLPSSTGFEMFKDAFYHRFENQWRGAPEEISQRLKVYLPDVE AAWARAENKPIFDIGCGRGEWLGLLRQHGMEGIGFDTNAVQIKEGQAAGLDLRLGDAL EALAQAEDNSLSVISAHHLIEHLPFDSVAWLTREAGRVLAPGGLLLFETPNTRNVLVG ATTFYTDPTHLKPMPEQVMGVLLETAGFEPVDIRHINPHERLGEFLDRPGFDNELAQL MFGPQDLAILGIKSKDK" /product="3-demethylubiquinone-9 3-methyltransferase" /transl_table=11 /EC_number="2.1.1.64" /note=", 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) (3,4- dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase)., SAM (and some other nucleotide) binding motif" /note="High confidence in function and specificity" CDS complement(1400369..1402957) /locus_tag="Silicibacter_1323" /function="COG: Subtilisin-like serine proteases" /translation="MAVPNDPLFSTQWHLQNTAVGEYDLNVVDVWDDYTGAGVTIAVI DDGVEATHPDLIANYSTLKDYDLLNSSDTIILTPESFPGAGDGSFHGTAVAGIIASVG NNNTGVVGVSYGSTLFGIKLGQELAAPIKLVSGQIMIGGIDRSADIVSMSLGTLSADN FFGSQDSSIETALAMAFGARTGRDGKGTIFVKSAGNERDADNTGTPVTTETNVAAWNA TMHSIAVAAVQRTGVIDDYSTPGSSVLISAFGSPGEIVTTDVTGTGYTAGSDYTSGFN GTSASAPQVSGVIALMLEANSNLGWRDVQTILAYSARHVGTEIGTSVSGSEKYAYAFN GADNWNGGGLHFSRDYGFGLVDAKSAVRIAETWGTDFAGTGNQEVASIDLLDTQMTLT GDGTVDRLSGAASTIVEIEHVQLKVDFAQLFDLQDLELRITGPDGTQSIVLDNVSADN DENDTNTLEQWDYFFSNAFRGMSSEGTWAVELIDLDSSGTSPVQVQNVELNFYGSVAS DNDTYIFTDEFSDYAGRSSHNTAFDDAAGLDTINAAAVSAASTLNLSEGTGNIDGVSI TFSGIESVYTGDGNDNLTGDAGNNVFQAGRGNDTINGGDGIDQAVVLANQFNYSVAIN KNGAVTVTDRNASEGEDGLTDIEMIKFADATLDLTQFVSTASLTVDQFEPLAEMYAAY FNRAPDATGLYFWADKLAEGLSLNQIAELFFDQAETRALYTDPSNTDAFVTSVYDNVL GRTPDASGFEFWKSQVSNGSVSQGAFVLEVIGGAKNGGSAEDVRYLSQKTDLGIYFSA IKGMSDVTDSASVFQTFGDASTSNLSGARAAVDQHYADATTANGGDFLFSLIGVIDDP FSATFV" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Peptidase S8 and S53, subtilisin, kexin, sedolisin, Subtilase family" /note="Hypothetical protein" CDS complement(1403282..1405051) /locus_tag="Silicibacter_1324" /function="COG: ABC-type multidrug transport system, ATPase and permease components" /gene="msbA" /translation="MENYMIARSWDRWRSSYIGRLVSESMRSQGWRYGVAALAMIIVA ASSAGTAWMMEKIVDAMTTPELRSKVYLVAGAVIGLFFTKALASYVQALFLARAGNRI VASQQEKLYRQLLRRGVGFFGTTDSSDLLMRVTHGAQAARELIDVLMTGFVRDTLTLI GLTIVMVYQQPVLSMLFILIGPIALLGVRHLLKSVRNIMRAEMASLAEIIRVLQETSG GIKIIKVFALEDRMVERMDTAIGQVEKRANDIAKLQSIASPLMELLAGVAIASILVVS TMGIANSEPPTAGQLMSFITALLMAYEPAKRLSRMRVGIETCMVTVSMMFELLDQDEA IQERAGAVNLEPGNGSIHFNNVTFGYHSDFPIIKDMNLSFEPGKTTALVGQSGGGKST IFGLIMRFYDPDAGAVEIDGHNVKDVSFASLRRKISYVGQDTFLFSTTIMENLRCSAP EASDEEVISAARAAHAHDFICEFPDGYETQVGENGVFLSGGQKQRIAIARAILRKSEI LLLDEATSALDAESEALVKTSLKTLTKDVTTIIIAHRLSTVLEADTIMVIKDGRVIEK GDMDELMKKNGSFRQLFEQQFKK" /product="Lipid A export ATP-binding/permease protein msbA." /transl_table=11 /note=", ABC transporter, transmembrane region, ABC transporter, MsbA_lipidA: lipid A export ATP-binding/permease protein MsbA" /note="Conserved hypothetical protein" CDS complement(1409009..1409980) /locus_tag="Silicibacter_1325" /function="COG: Predicted sugar phosphate isomerase involved in capsule formation" /gene="kdsD" /transl_table=11 /note="identified by match to putative ortholog SPO0082 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="arabinose 5-phosphate isomerase" /translation="MTPRELTCDETLAEMARVLTVEAAALTQMASEVGDPQLKAVEIL EAMEGRVIVSGVGKSGHIGNKIAATLASTGTPAQFVHATEASHGDLGMVTPRDVCLVI SNSGETSELADIVTYSRRFAIPLIAITRKADSTLATQADVVLLLPDAPEACGIGMAPT TSTTATLAMGDALAVALMKRRGFEREDFKVFHPGGKLGAQLMLVDGLMHTGEALPLVA PETPMTEALLIMTAKGFGLAGLVEGGRLTGIITDGDLRRNMDGLMARSAGEVATRGPK VIRRGSLASEALHDMNSRKISALFVLDNEDRVAGLLHIHDCLRAGLA" /EC_number="5.3.1.13" CDS 1410290..1410649 /locus_tag="Silicibacter_1326" /translation="MKYMLLIYAAPDREPAYGTPEFDEMMAGFAATSEKMNADGVMVD GEGLQGIETATSLRITSGKVETMDGPFAETREHLGGYYVIDVPDLDTALRYAAMIPVA HFGTIEVRPLMDYNPAG" /product="Hypothetical protein R00369." /transl_table=11 /note=", DGPFAETKE, DGPF domain" /note="Conserved hypothetical protein" CDS 1410655..1411902 /locus_tag="Silicibacter_1327" /function="COG: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog" /translation="MTHAVPSAIAVQQVIDDVMRRDRGRLLAGLSVRLGDIQLAEDAL QEAVIAALKHWGRSGVPHAPLAWLMRAGFNKGIDQLRSRQREGRKAEDLGLIAPDQDA AEQAETIPDARLRLIFTCCHPALEEKSRVALTLRTVCSLSTRDIAAAFLDSEQTMGQR LSRAKAKIRAKGIGFQVPEPDQWSERLGTVLSTLYLIFTTGYVQEEAGPRDFCREGIY LARLLCALRPDDPEIEGALALMLLTEARSAARIGPDGAMRPIEDQDSSLWHHETITEA QALLAQAVLRRQPGAFQIKAALADCHMMRPKPDWAQMALLYQALWRFEPTPVVALNQA VVMAELGQGAQALNHLRALEDDLGQFQPWHAAMAHVLAQEGHIGDARCAYEQAIKTAP HDAARRFLETRVQRLPPCAFSGS" /product="Hypothetical protein R00370." /transl_table=11 /note=", Sigma-70 region 2" /note="Conserved hypothetical protein" CDS 1411957..1412724 /locus_tag="Silicibacter_1328" /function="COG: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain" /gene="gnlP" /translation="MPLRSFFALITCIGTLCSAPVWAETIRLVQDEAYAPYMTKDGKQ PTGIWAEVITQALSRIEGDYDVVLEAVPWSRAVNLVESGQAHGLVGTYYKPDSRPWIG TYSTAPFTENVAVYCRDGVAEAGWSYPQDFKGLTFGNNAGFGTPGQAFFDLVASGLIS LQEAPTTDLNLKKLAAGRIDCYVQEQLTAEIAITALGISGITQVLDTSVENSMIGFRA SWQGAEAEGFIAEMDRALAEMMADGTIDQIIATAVAG" /product="conserved hypothetical protein" /transl_table=11 /note="Hypothetical protein" CDS complement(1412782..1414035) /locus_tag="Silicibacter_1329" /function="COG: Glycosyltransferase" /gene="expC" /transl_table=11 /note=", [EC:2.4.1.-], Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 1) (Shrunken-1)., Glycosyl transferase, group 1, Glycosyl transferases group 1" /note="High confidence in function and specificity" /product="putative glycosyltransferase" /translation="MKILFVHQNMPGQYRELVRWLAAQGGHELVFLSQRGGVKIPGVH TLVYTPFHVPAKDAFGLSKDWEAAAGAGFGAVQTMQKFERKHGFRPDIILGHTGWGEL SFFKDLWPDVPILGFFEYYYSMQGGMVGFDPEQPPGPHAPYFNRARNVVPCLNRDVVD LGHVPTLWQRDRFPASFHDKMYVCHDGIRADRLHANPEAQLSLGRLEQPISRGDEIVT YVARNMERARGFHIMMRALPAIQAARPNARILMIGGNEASYGRESEHPGGLRGEMEAE VGQYVDWSRVHFLGRVPYGDLCQIIQLSRCHIYLTMPFVLSWSLLEAMAMEATIVAAD VEPVREVITHGDTGLLVDFFDPEALAAQVAEVLARPQDFASLGARARARVMQDYDFLT RCLPEHLSQINRLVPSARPIPLPEG" /EC_number="2.4.1.-" CDS complement(1414046..1414918) /locus_tag="Silicibacter_1330" /function="COG: dTDP-glucose pyrophosphorylase" /gene="rfbA" /transl_table=11 /note=", [EC:2.7.7.24] , Glucose-1-phosphate thymidylyltransferase 1 (EC 2.7.7.24) (dTDP- glucose synthase 1) (dTDP-glucose pyrophosphorylase 1)., Glucose-1-phosphate thymidylyltransferase, long form, Nucleotidyl transferase, rmlA: glucose-1-phosphate thymidylyltransferase" /note="High confidence in function and specificity" /product="glucose-1-phosphate thymidylyltransferase" /translation="MTQRKGIILAGGSGTRLYPITMAVSKQLLPLYDKPMIYYPISVL MLAGIREICVITTPQDADQFQRLLGDGSQWGVRLTYVEQPSPDGLAQAFILAEEFLAG APSALVLGDNVFFGHGLPELLAAADAKEAGGTVFGYHVADPERYGVVAFDGDGRAHQI IEKPEVPPSNYAVTGLYFLDGSAPARAREVQPSARGELEITDLLQMYLNEGSLSVETM GRGYAWLDTGTHGSLLDAGNFVRTLHERQGLQTGCLEEIAYHADWISRDALAERAELF KKNSYGQYLKRLLG" /EC_number="2.7.7.24" CDS complement(1414915..1415760) /locus_tag="Silicibacter_1331" /function="COG: dTDP-4-dehydrorhamnose reductase" /gene="rmlD" /transl_table=11 /note=", Probable dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) (dTDP-4-keto- L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L- rhamnose synthetase)., dTDP-4-dehydrorhamnose reductase, RmlD substrate binding domain, rmlD: dTDP-4-dehydrorhamnose reductase" /note="High confidence in function and specificity" /product="dTDP-4-dehydrorhamnose reductase" /translation="MSILVFGATGQVARELARHEGVISVGREQADLSDPGACAALIRE TAPEAVINAAAYTAVDKAETEEELATVINGAAPGAMAAACVQMGIPFVHISTDYVFAG TGEAPWQTDDPVAPPNAYGRSKRAGEEAVIAAGGTYAILRTSWVVSAHGNNFVKTMLR LGAARAQVSVVADQIGAPTPARDIAEACLKMARQLVLEPKKSGIYHFQGAPYVSWAGF AAEIFAISNLACEVVEIPTTDYPTPAVRPLNSRLDCTTLETVFGIPQPDWRRGLQDIL KELAE" /EC_number="1.1.1.133" CDS complement(1415826..1416878) /locus_tag="Silicibacter_1332" /function="COG: dTDP-D-glucose 4,6-dehydratase" /gene="rfbB" /transl_table=11 /note=", [EC:4.2.1.46] , dTDP-glucose 4,6-dehydratase, NAD dependent epimerase/dehydratase family, dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase" /note="High confidence in function and specificity" /product="dTDP-glucose 4,6-dehydratase" /translation="MKILVTGGAGFIGSAVVRQAIAAGHEVVNLDALTYAACLDNVAS VAESPSYVFEEADIRDRAALDRIFAEHAPDAVMHLAAESHVDRSIDGPGDFIETNVTG TFNMLEAARKFWIAVGKPARFRFHHISTDEVYGSLPTDKSVMFTEETAYDPRSPYSAS KASSDHLVRAWHETYGLPVVLTNCSNNYGPFHFPEKLIPVVILNALAGKALPIYGDGS NIRDWLYVEDHADALLLVLQKGENGRSYNVGGENERTNLELVETLCAILDDKRPREDG TSYKEQITFVTDRPGHDARYAIDPSRIRTELGWRPSVTVEEGLAKTVQWYLDNEDWWR ALQSRKGVGERLGVQT" /EC_number="4.2.1.46" CDS complement(1416936..1418141) /locus_tag="Silicibacter_1333" /function="COG: Predicted acyltransferases" /translation="MASRSCRKKMPPRPSLRICKAPSYSDPMPALTAPQAHRAYLERT RFGALDGLRALAIGGVLIHHSALAQEAGAWSRGFLGVDLFFVISGFLITTLLLRERDR EGAIALGAFYWRRALRILPLYYLVVTVAGIYFVIVSGHWEALKIWPAYYLFFANFLTE HIPTLYPTWSLSIEEQFYLLWPLVLIWLPPRLWGAVVLLGVVLNVVAVSGVLRTFGVV PFELGPLWVHLPDATYAPLLLGAGLALMLHDPRGFALVWRLLGGAGMPFVGLGVLLAL VFLLLPQVLAGWPYLLVHLAMTGWLATLVLREDSWLHGMLRLRPLVRIGMVSYGIYLL HLMVLHMVRLAGEPLGFAQDSAIFLLAYWGGTFLLAEVSFRYYERYFLRLRHKPLGRM GAVRAGQSD" /product="Serine/alanine racemase" /transl_table=11 /EC_number="5.1.1.1" /note=", Serine/alanine racemase (EC 5.1.1.-) (EC 5.1.1.1) (Vancomycin C-type resistance protein vanT)., Acyltransferase 3, Acyltransferase family" /note="High confidence in function and specificity" CDS complement(1418065..1418613) /locus_tag="Silicibacter_1334" /function="COG: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes" /gene="rfbC" /transl_table=11 /note=", [EC:5.1.3.13] , dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) (dTDP-4-keto-6- deoxyglucose 3,5-epimerase) (dTDP-L-rhamnose synthetase)., RmlC-like cupin, dTDP-4-dehydrorhamnose 3,5-epimerase, rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase" /note="High confidence in function and specificity" /product="dTDP-4-dehydrorhamnose 3,5-epimerase" /translation="MKVEDTKLSGVKILTPARFGDARGFFSESWNRKRMAEHGLDLEF VQDNHSMSADVGTIRGLHFQAPPHAQDKLVRCGQGVLFDVVVDIRNGSPTYGEWIGVE LSAENGRQLLVPKGFLHGFITRAPMTEIIYKCTDYYAPECDGGVRWDSCGIDWGFDGQ PILSEKDAAAPKFADLQSPFVF" /EC_number="5.1.3.13" CDS complement(1418916..1419803) /locus_tag="Silicibacter_1335" /function="COG: Sugar kinases, ribokinase family" /gene="kdgK" /transl_table=11 /note="identified by match to putative ortholog SPO2420 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="2-dehydro-3-deoxygluconokinase" /translation="MTRIVVIGECMVEMAPVDGGLYRMGFAGDTFNMAWHLRYLLGSD HCVDYLSAVGDDSTSNAMLDFIQSQGVGIAHIRQIAGMTTGLYLIRQENGDRAFSYWR ETSAARQLADDPAALARALQEADLVCLSGITLAILSPKAREVLWAAITESGAQVAFDP NIRPTLWSSQEDCRAALTYAAVRSDVILPSFDDDAALFGDVAPQATVARYTRLGVGEV VVKDAARPAIYSGSDGTLEIAADRLAVPVVDATGAGDSFNAAWLAARLQGAAPKEALI AAHKHAACVLQVSGALLVS" /EC_number="2.7.1.45" CDS complement(1419803..1421200) /locus_tag="Silicibacter_1336" /gene="uxaC" /translation="MTGFLHQDFLLDTATARRLFHEVARYLPIVDYHNHLPPAEIASD RTWENLGEMWLAHDHYKWRVMRWAGIDEARVTGDATWREKFDAFAEAMPRAVLNPVHH WSHLELWRYFDLNGTVLSPISADNVWDAANAQLGEKGYSAQSLLRKMKVELVGTTDDP LDTLEHHAAMAGSDIRVVPTFRPDKSVQIEAPGFAAYMDSLEALTHPIHSFDDLVAAL SLRLDYFVEQGCRAADHGISHLDAANIPGAFDLDAALKAARQGKPITPEQVAGHRAAL FDALGRAYAVRGLVMQCHMNVVRNGSSRLLLGVGPDAGGDSMRDTDMAGPLNILLDRL DRDGKLPRMVLYGLDPSRNPILAATAGTFQDGSVPGKIQAGAAWWFNDTLDGMEAQMR TLAQVGLLSTFLGMLTDSRSFLSFPRHEYFRRLLCGMIGRWAETGHLPDDADLLDRLV RDICYNNAKAWFLEQ" /product="uronate isomerase" /transl_table=11 /EC_number="5.3.1.12" /note=", [EC:5.3.1.12] , Uronate isomerase (EC 5.3.1.12) (Glucuronate isomerase) (Uronic isomerase)., Glucuronate isomerase, Glucuronate isomerase" /note="High confidence in function and specificity" CDS complement(1421197..1422612) /locus_tag="Silicibacter_1337" /function="COG: Mannitol-1-phosphate/altronate dehydrogenases" /gene="uxuB" /transl_table=11 /note="identified by match to putative ortholog SPO1724 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="D-mannonate oxidoreductase" /translation="MTNSLIPCSYEQTLLKPRILHIGFGAFARAHPMVYLHHGLVAEG GDWGVVAARLNSGVDALDSLDAVQGRYHIAEADGDTITLREIGLLCGTCHPARDGVDA IPALIASPDMSVILLTITEKGYCTKDGQLDLTQAAIQAELDGGLPTTAIGVLVSGLER RRAADLGGITILSCDNQPDNGALTRAAVLGFAEELDLNLAEWIRTHVRFPSSMVDRIV PAMTDDSHTAVASALGRDDPNAVLCEPFRQWVIEDDFANERPPFAEGGAMLVADVQPF EEMKLRLLNGAHTTLAWLGQLLGYQTVADCMADKELRALIRHLMLAEQAATLRPLEGI DLAAYADELLKRFENTRLRHRLDQIASDSSQKMPQRLFAPIAINLEAKREWSVSALAV AAWIKGLGSLPPVPDPRQDELRRAALCNDPVAAVLSLPSLVPDALRPLAEFQAAISVA FERLQGGAKATVTTTAKELRR" /EC_number="1.1.1.57" CDS complement(1422609..1424963) /locus_tag="Silicibacter_1338" /function="COG: Alpha-glucosidases, family 31 of glycosyl hydrolases" /translation="MKCLKIWALEAETTTGVILRVEGRHLLHISVLEENRFRVSLQKD AEWRLERTWTVAPAGDAPWEGRRREDISGFSCPPPQLSQNETELVLSTETMRLRILAP LQMVWEAKVNGAWKAFAEDRPTGGIHLGLRDHAHAHFLSRHPQEPVFGLGEKTGPLNR VGQRYEMRNLDAMGYDAERTDPLYKHVPFTLTRTQTAGCWSIFYDNLASCWFDFGNEL DNYHAPYRAYRAEDGDLDFYMTWAPELLDLVKQQERLTGGTAFPPRWSLGYSGSTMSY TDAPDAQAQLEGFLTKIAEYRIPCDSFQMSSGYTSIGPKRYVFNWNDEKVPDPAAMAA KFADKGVHLIANIKPCLLQDHPRYAEVANAGLFVQASAEADTNCGPERSVFWDDEGSH LDFTNQATVDWWKQNIGEALLQRGIGSTWNDNNEYEIWDRHAQCAGFGKAIDMSLMRP VMPILMTRASMEAQEAHAPEKRPYLISRSGAPGLQRYAQTWSGDNRTDWKTLRWNQRM GLGMSMSGFYNIGHDIGGFSGPRPEPELFVRWVQNGVFHPRFTIHSWNDDATVNEPWM YPEVTDHIRAAIELRYQLLPYLYTCLWQAAERSEPMLRPLFLDFGADPQAWEESDSFL LGRDLLVATVLDKGVDAISVYLPRHSGGWWDFHTGLWHEGGQWLTVPVALDTIPLFIR GGAVVPMGQGADRAAPEMEIARLLAVFPAQGVQETTSLLYEDDGVTKTGKWCLSHLVL NSTNDHISLISKREGNGAPVLPEALVVLPAGERRILKTGTRIDL" /product="Alpha-glucosidase precursor" /transl_table=11 /EC_number="3.2.1.20" /note=", Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)., Glycoside hydrolase, family 31, Glycosyl hydrolases family 31" /note="High confidence in function and specificity" CDS complement(1424963..1426264) /locus_tag="Silicibacter_1339" /function="COG: TRAP-type C4-dicarboxylate transport system, large permease component" /translation="MTTAIFLLFGSFVVLMALGVPIAFAIGLATTATFLLFMGVDQSL FIVAQQMASGLDSFTLLAIPFFILAGNIMNRGGIAMRLINFAKVLGGRLPGALAHCNV IANMMFGSISGSAVASAAAVGGVMAPLQKKEGYDPAFSAAVNIASCPTGLLIPPSATL IVYSLITGGTSIAALFVAGYLPGILMGLGLMIVAGVIAKRRGYPVAPRPALSEVMVAA RDAALPLGLIVIVMGGIISGVFTATEASAAAVLYTLVLALVWYREITIKDLPAILIES AVTTSVVLLMIGASIAMSRVMAFGGIPFAISDFLLGLSDNPIAILLAINVALLVVGTF MDMTPALLIFTPIFMPVVKGLGMDPVHFGIVMTLNLCIGICTPPVGSALFVGCSVGGT SIAKVIRPLLPFYAVLFGLLMLVTYVPDISLFLPRLLLGYQ" /product="TRAP dicarboxylate transporter, DctM subunit" /transl_table=11 /note="identified by match to putative ortholog SPO1719 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1427051..1428025 /locus_tag="Silicibacter_1340" /function="COG: TRAP-type C4-dicarboxylate transport system, periplasmic component" /gene="dctB" /translation="MTKTFTTALSALALTASVGATGATTLKLNHNNPPDHPVHISMQI MADRVAELTDGEIKIQIFPNAQLGTQRESMELVQNCALEMARSNASELEAFEESYSAL NLPYIFSSEEHFNTVITGDIGQDILNSSVDQGFRGVAFYTEGARSFYAQKPIMSPADL QGVKVRVQPSPSAIRMVELLGGNPTPISWGELYSALQQGVVDAAENNPTALTTARHGE VVSDFSLDEHTMIPSVVVISNCAWDGMTAEQQKALQTAALDSMAAHRKAWNAASDAAI EEAKTTLNVNVHMVDKAPFAEAVLPMHEEVAAKSEHLADLIDRIKAAQ" /product="Putative ABC transporter periplasmic binding protein yiaO precursor." /transl_table=11 /note=", TRAP dicarboxylate transporter- DctP subunit, Bacterial extracellular solute-binding protein, family 7, dctP: TRAP transporter solute receptor, DctP family" /note="Conserved hypothetical protein" CDS 1428044..1429855 /locus_tag="Silicibacter_1341" /function="COG: Beta-galactosidase/beta-glucuronidase" /gene="uidA" /transl_table=11 /note=", [EC:3.2.1.31] , Glycoside hydrolase, family 2, TIM barrel domain, Glycosyl hydrolases family 2, sugar binding domain" /note="High confidence in function and specificity" /product="beta-glucuronidase" /translation="MLERSELADNALQALHDEDYDRPFNTQNLNADTLIFTRGRQGQS LDGDWNFCVDLLDTGLRQKWFAMTPETPADRVEPWDYDPYMGDTVPVPSCWQMQKEKW YFFEGSAWYTRPLTHTPTPERRQVLRIGAAQYDCKVFLNGAFLGNHYGGSTPFCVELT EALKPGQNWLMLCVNNTRTLDRVPMRNTDWFNYGGVYREVTLYDLPSVVIRDLFVRLE GNAIRVSAEVDGECASAQLLIPELGIDVELPLIAGKGDLTLPASPELWSPDNPKLYDV SLTAGEDQVRDRVGFRSISREGTEILLNGTPLFLRGISVHEDDATQGKVTSETDIRRR FAHAKELGCNFLRLAHYPHHERASEIADEMGLMLWEEVPVYWAIDFANPATRRDAENQ LRELIRRDRNRASVIIWSVGNENPDTDARLDFMRGLADLAKTEDPTRLTSAACLVNHT KLKIEDRLAEYIDIIGLNEYYGWYEENFDELNEIGRNSAPDRPVVISETGADGDSTEQ GPERGLFSLAYQDEVYAKQIATLRTLDYVKGMSPWILYDFRVERRQGIFQRGWNRKGL IAGDKATKKPAFHRLAAYYAERAAVEHQPPFAPEETA" /EC_number="3.2.1.31" CDS 1429852..1430583 /locus_tag="Silicibacter_1342" /function="COG: Transcriptional regulators" /gene="uxuR" /translation="MTQYRRYQDVAQALRGVIREEGFAVGDRLPPERQLSERLSVSRS LVREALIMLEIDGLVEVRKGSGIYLATPSATKAPPERDDIGPFELLQARQLLESSIAA FAAEMVTKNDITRMREALEMERADIEAGSTDHSGDELFHRLIAEATQNSVLVDMVDEL WRKRDQSPMWAKLHDRIFDAGYRQNWLDDHQQILTALRTKDRDGARAAMWQHLAHVRE TLMELSDVDDPAFDGYLFQSISAPT" /product="Uxu operon regulator." /transl_table=11 /note=", GntR, C-terminal, FCD domain" /note="Conserved hypothetical protein" CDS 1430650..1431819 /locus_tag="Silicibacter_1343" /function="COG: D-mannonate dehydratase" /gene="uxuA" /transl_table=11 /note="identified by match to putative ortholog SPO1723 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="mannonate dehydratase" /translation="MIETWRWFGPNDPVTLTDIRQAGATGVVTALHSLPNGTVWPVEE IVARRDMITAAGLNWDVVESVPVHEDIKRAAPGWEEKADAWAQSIRNLAACGIKTVCY NFMPLLDWTRTDLTHPLSDGALCLRYDAVDAAVFDIHILTRVGADAEHRPEIVQRATE RFTKMTETECEALTQTILAGLPGAEESFDINSFRSHLALYNDIDATRLRANLAAFLQR VVPVAEEVGVRLGIHPDDPPFPIFGLPRVVSTAEDLDHIIQVYESPSNGLTFCTGSLG VRADNNLPAMLTRFGKHVNFLHLRATQREEDGISFHEAPHLLGNVDMVAVCKAALAAE AVGDRELPFRPDHGHMLAHDQRVSSTPGYPYIGRLRGLAELRGVLHTLAWLQKDD" /EC_number="4.2.1.8" CDS 1433547..1433699 /locus_tag="Silicibacter_1345" /translation="MRVGALDEHQLAFISEILEDENRRLDATAMLTVMPNFGLSVSSI LGEDTR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1433466..1433576) /locus_tag="Silicibacter_1344" /translation="MVLVERANPHRKGIDAVDGIYSFKTRKIANRSILGV" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1433840..1439113 /locus_tag="Silicibacter_1346" /function="COG: RTX toxins and related Ca2+-binding proteins" /translation="MSTILTFSSNDGNGIGADNLATDGEGGSSDIGGITIQIANISDV LGTQISSLNWYNDGNLSSGDGFSGITTDFAFGGEWKGMSIRSAGGEEFQLESFDFFDW GTFPYAASTLNITGFRDNVQVATDTFSSNNNNNRVNVDISGNTTFDAVDEVRITFDIG TGYLSLNNITIANAVPPNTAPSLGGTPADDTAVEDAAAAIDLSAYNISDAEGDDPLTL TLAVDRGTIASVDGNGTVDGVTIASSSTSNMTLQGSAAALNTYLDDTSHITFTTDSND TSAATLTVTPNDGTANGTADTVTITITPVNDDPSVSGLPASVTVAEDTLSNIDLSAAS IGDIDSSTITVTLSASGGSFGTPSDGAGTGGGVTETLVNATTISLVGSPADISTYLDT ASNIRYTPPSNAVGAGQATISVTANDGDGSGDVALGTVQVNVTEVNDPPVLTGLDATP SVTEDGIPVVLDADVTISDEELDALNGGNGDYAGATLAIARNGGADTSDILSVITGGN LTVAGGPNGGGTISASGNVIATISNTGNGQLQITFADNGTTPTTALVNESLQAIRYTN GADDPATSVQLDWDFSDGNGHAAGSVTVSLTNVNDAPTLTATGGNPTFVEGGAAQDLY NTVSADAVEIGDRITGLTLTVTNLADSASEILSIDGSDVALTDGNSVTTATNSLSVSV NVSGTTATVSFTGATLSAAQAQTLVDGLTYRNLSDNPTTAGNRVVTITGITDDGGTAN GGAASNAPTLSSTVSLTAVNDAPSVASVFGETSQIITGGGAQAITGLANATVSNADSI DYNGGFLTIAQISGAGNGSWGVDGTTVTAGGDGTILVGETLQVSGVTIGTIDATADGQ SGHDLTINFNADSSSARIEAFLQNLRFEAPSSIGDRGYTLTLNDGDGIANGGDADASG SITLSITPNPPVLGNLDGDSVSATENAGAVSLDIGANATVTDADSPNFNGGTLRASVT NNADAASDVLSVATSGVVALAAMTAGSNVSVSGTVIGTLANNIVAGNDFVVTLNADAT PARVQSIVQALSFEATGEAPTAGTRTVSVTLSDGSGSGNAHVNVAVTALNDAPQITGL VSDVSFTEDTPANLDLSALTLSDVDTTSSLTLTLTASAGTLAATSGGGVTVGGSATGT LILAGTIVDIDTFLNSATHVHYSPAANAAGNDAATISLTINDTGTSTDLGTVNVDITP VNDAPTNPATADIQQAFDTPHTFTVGDFGFADVDGDTLQSVRIDTLPGAGVLSLNASP VSATDVITIGDIIGGNIVFTAASGASGDDYAIFTYSVNDGTTFSAAPGTITIDVAAAP PAGGGGQPAEPEPDLVDGVPVERTTTTENSLSVEKIVITPVSNTREDTDAATSLADIP LHFDSDGQAVTTVSVPTGVGFTARANETATIQTSFRDGLYLLRDSAPESDWFSMINGL DQWLNGVSAGWLNQVTLTTNTTSAPSEPIRITGREGDSTEVMVIDGSQLPVGAVLDLD NIEFAIIVGDVTVRSGAGTNVVYAGSGAQNIVLGADDDHLNGGDGDDTIGSEGGDDRL FGDAGNDTLFGGPGANVMHGGLGMDTIIYAANRDRFEISIEKGQVIVTSLDGPSLQDT IINAELIRFTDTDLSIDASSSAFSESDLTIATLFTTVLGRQADLAGYQFWTNVADTKL DLASIAMFMLRSEENTQTEGQAFDTLSLEAQIDRLYQEILGRAPDDAGAAFWNAAAEA GFAIDDIAGAFVDAPEFVGLALQPTGLDFLI" /product="Hypothetical protein yeeJ." /transl_table=11 /note=", Serralysin-like metalloprotease, C-terminal" /note="Conserved hypothetical protein" CDS 1439497..1439703 /locus_tag="Silicibacter_1347" /translation="MFPSECPLPAVTSASLWCCDCTDHVRFGLAAVIDFGANPPKYAK SIAAMPHGSFEARVTDVTLYTNDS" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1440379..1441359 /locus_tag="Silicibacter_1348" /function="COG: Predicted transcriptional regulators" /translation="MKPVILPSQMTAHQRREAWYGEEIPHARYLRDYDFPLKEALFFC LSELEGILGAEAIAPKIAAIVPGNQPTDWDWRSLPFDSSVSPSASGWDCAKRLDDAGL YGLLGVRPANVPFEARKSWVAKLPLELDDWRQNVRLGKDANNISLIIDLALSRHAMDT GLSLASITDEDLNEEGEVSVPALAVFGGVSEGRIRNVLSSGESCLVRKSGQAVTASSA KEWLAGRKEFYQSIWDLPEGEKPEPKARNFSGEVLFVPVASDGSTFNPELKHKGKYTV GAKGQEIQFDQFQDALNALQKMSTPRWRRPNAAGNWCIVSGRDWKRIEKK" /product="putative transcription regulator" /transl_table=11 /note="Hypothetical protein" CDS 1441593..1442060 /locus_tag="Silicibacter_1349" /translation="MYNTGRMWRLRNDPATKTDGDIAKAMRNAFIARHCSCTWVTLPD DADISGLEAKVIALVTSDMVAWNRRGMHVYDGPAELVDALLKALRLSPVERAAIARQQ VRQMAGESAAQAPHDTAPVLDDVCVAYPRHPQFTSIASAVLPVQRKRPRGCEG" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" tRNA complement(1442088..1442161) /locus_tag="Silicibacter_25" /gene="Silicibacter_25" /description="RNA" /note="Created by Search for RNAs Autoannotator" rRNA 1444663..1447508 /locus_tag="Silicibacter_56" /gene="23S rRNA" /description="RNA" rRNA complement(1442567..1445405) /locus_tag="Silicibacter_65" /gene="23S rRNA" /description="RNA" tRNA complement(1445956..1446028) /locus_tag="Silicibacter_44" /gene="Silicibacter_44" /description="RNA" /note="Created by Search for RNAs Autoannotator" tRNA complement(1446097..1446170) /locus_tag="Silicibacter_9" /gene="Silicibacter_9" /description="RNA" /note="Created by Search for RNAs Autoannotator" rRNA complement(1446312..1447761) /locus_tag="Silicibacter_32" /gene="16S rRNA" /description="RNA" tRNA 1447912..1447985 /locus_tag="Silicibacter_53" /gene="Silicibacter_53" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS complement(1448265..1448855) /locus_tag="Silicibacter_1350" /function="COG: Predicted HD phosphohydrolase" /translation="MLDKTHRPTWTRMEDASKEDFLAVMAYDDHFNAGLVDRLIAALI SLDEDWTPYPINRYQHSLQAASRAYEDGAEEEIVVAALIHDIGDILSPYNHGEVAAAI AKPYMSEKACWILKHHCVFQGYYYNHHLGGDRLARERYKDSPYYDACVYFCHNYDQNA FDPAYATKPLEFFEPMLRRVFSNAGGHIELNETRDA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0638 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1448970..1449845 /locus_tag="Silicibacter_1351" /function="COG: Transcriptional regulator" /translation="MTFAQIQTFLAVARLGNFHAAARQLNVTQAAVSARVRQLEEELD LRLFERGRRGAELTEAGRFLLPGAEAIASTWTTISKDARHFYAGRVPLRLGGQLSIWD QQLVDLVIWVEETLGALPLALNFDHEMNVQDAIRNGVLDFALTHEQPAPDLTGVALPA ERLVLVGSEPFDLGQSDLPLFMNFQLGGQYDAFVARHLSGHAGQHIMMGNCAMGLRYL RKRGGIAFFPVSMVVEDIQHGHLFPVQGVPEMELACNAVYHPSSVLGDLTAQIATAAR SLRSREPVVALDTMS" /product="transcriptional regulator, LysR family" /transl_table=11 /note="identified by match to putative ortholog SPO0639 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1449895..1450782) /locus_tag="Silicibacter_1352" /function="COG: Transcriptional regulator" /gene="yvbU" /translation="MTFGQLEIFVALSEAQSFTLTARRLGISQPAVSHALKSLETALN VSLFDRQGSQIVLTPIGAQLLERAREILGLSRTMQQEAASFRGLDTGSLRIGSFGATS SLQLLPDLMSAFHRAYPGIDVFIEEAADDIIVKWLEERRIDMGFVVLPDDRFETIPIA TDQFVALVPRQSALAKQERVTLSDLCNDPFIMPESGSVKIVSALFAAAGLTPQTRYRT SQLLSTLSMVGRGQGVSVVAEMAVPAAHPDNPWVIRPLSPAHPRMIGLALHPTAVRSP AVTAFLRIAKTLRTRPKCA" /product="Hydrogen peroxide-inducible genes activator" /transl_table=11 /note=", Hydrogen peroxide-inducible genes activator (Morphology and auto- aggregation control protein)., LysR, substrate-binding, LysR substrate binding domain" /note="High confidence in function and specificity" CDS 1450827..1451774 /locus_tag="Silicibacter_1353" /function="COG: Permeases of the drug/metabolite transporter (DMT) superfamily" /translation="MSILILMVVQMAFSPDTALPLPTAALYAKLTATAVFWGGTFVAG RALAGQLDPLASATGRFGIAVLCLLVLTRCVEGGLPRLTLSQLGLTLGLGLTGVVSYN LFFFAALTEMPASRTALFVTFNPISVTVVMVVFGQERMTLRQVAGILVALFGALVVIS KGDLLHVSMHFGRGEAYMCGAVLSWVGYTVIGRSAMRQLSALAATTYAALWGFAILAG ALLWSVYWSGHGPAPQGLRLDVAAALFYLAIGGTVVPFVWYSEGIRALGAGRAAVFNN LVPCAGVLLGFVILSEPLTAAMLAGGGVVILGVALTNRG" /product="hypothetical protein" /transl_table=11 /note=", Protein of unknown function DUF6, Integral membrane protein DUF6" /note="Hypothetical protein" CDS 1451886..1452893 /locus_tag="Silicibacter_1354" /translation="MSPSNMGNSPYSTLSNPRLSNDFWTWILARPCGTRGINAGAFKR FIHIATDDDLRGKMKKYMMLTLLPLVAACSGGGTTGGTTATPQTGQALTVRTTPMGAV VTKDAGYNDVVAVYNAAGDTPSTVNKTLPGLSNGVDVLAQQGVNRWETEVERTVVASI AANGHKITRDRISGIDGAMVETYRLYDPNDALVAIETRGSNAATAAVVGSVGYWGQWN GEVDGVNYEEGAVNIVVNGSTGQADLIVYDPTSAQTFINEASGSNTLTYDAASQQVTG SVVFTTATQSASGEALLSLAGSTAVAGSTSAPELITGHAYTDANQPFGANIGMIGALD N" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1452970..1453944 /locus_tag="Silicibacter_1355" /translation="MKQLLVLFLSLCLAGGGKADERLRTYYGMKLAVAGIPVFVPQDP LVRFGQVEAAPKGTWRFNVMPVFGYDSNLNGGVPHDVVDINGLRFTVLEKDRAIGGLE AGVMARVRAEYYLAQGHRLSGALSARYTRALAHDLASQVATANACYHYDAPSWTFAQA CVTAGLSKTELSKTQTETARISIGRVFDVGKFPKSFQLGLSKTNGNDADYTQVHANYN VNTARATYAIGLMTRIEGEGHSEDKSAYMQITNSMIGRPVSTVFRYSTSSGGGFLGLQ RDERTASVTISVPLTDRLAFDLSYSDTRSPLQYFRKKTFGANFILTKF" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1454086..1454889 /locus_tag="Silicibacter_1356" /function="COG: DNA-binding HTH domain-containing proteins" /translation="MSDIPKIMTQILEAPTLEQKYRVFADFMEGEFGYVGVNYGIFLD ARSAQAISNHFIAKRMGMSSEWREIYQKQGYGRRDLAMMMGAVTKRPILQTQFYQMQR QDDIPKPYAEVIEGVHDFVKCGVVLPVYANGRKGVVGLYDPKGDAAKHDEKYRKYGTL IEALARHLHVSSSWAEETIAQTRLSEMNLRVLRLKARGLRVKEILHQIERDNPKTVDN HMARVRRSLGARNDVEAVAKAATLGLLEPSGDPFDHEGADILPRGIGRT" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Bacterial regulatory protein, LuxR" /note="Hypothetical protein" CDS 1455068..1455562 /locus_tag="Silicibacter_1357" /function="COG: Predicted kinase" /translation="MHHSGPRLHIIFGKIASGKSTLAKRLAAEPATVLISEDVWLKTL FGDALQTLEDYIRCSRLLRATMAPHVVALLQSGVSVVLDFAANTPAQRQWFREIVEVS GVDHALHVLDVSDDVCLARLQRRNAEGSHPFTVTESQFHDFMQHVTRPGADEGFNLVI HGAD" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1053 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1455685..1458342) /locus_tag="Silicibacter_1358" /function="COG: Methyl-accepting chemotaxis protein" /gene="mcp" /translation="MLRQIGPKGAKFLRRLNPLSSIRGKITFILLALLMMVGGAGYLI LQSFDRVSRSVGEMTERDLPQLAQSNGLILAATKTKDAMIEILMSQNPEALKNAATHV ETASTELASAVAALPAEQQQAFEADLAKVGATLQASIDARATSFANTDQLNAMTQDLQ RLAADLQAVLLETADDAYFNTAMKGEDTITSIEETLFDLAENKFATLQTVLEIRAEIN FLSGITLAMSSTTDRSMLSIFGDLAISSRDRLSGAISSLDGTDAGATAGEDLAMISAA LSDAVAAGREGRAVDRDAVLSTRREADAVLSSTVDDLVFELTIAADDAATGNRDAIQG LLDNEVAFLNRLLEISSWLSAFQIEALKIATAQTFEQAEVASKAMQAASGALAGFSEF GGGILADQIAQMAAMADPDTGLAAFRIKSLEANQAATEAASATVNAVLQIAGQASLRG LESQTTITNQALGIAADATEVQANLQTIGWIALAFVGVALLLSHVLIIRPLNAISLTT ERLSQGDMSPVTGFNRASDEIARIARALTVFRDGLVEKEELTRIADEERAENQARQTA AVEAIGMGLARLARGDLTYRIDQELTEGYAQLKEDFNSTAQTLNMTVVDVVQLADSIR NGSSEISQASDDLSQRTESQAATLEETAAALEELTASVRSAAEGARDAENTTNKAREQ ATQNGQVVEQAVTAMQEIESSSSQIEQIIGVIDDIAFQTNLLALNAGVEAARAGEAGR GFAVVASEVRGLSQRTTEAARDIKELISKSSTQVEAGVDLVGRAGQALGDILERVTHI SGLVSTIAESTDEQATGLGEANVAVSQLDQVTQQNAAMVEETNAAGQLLRQDAEKLAT LMANFTVSSISSSAQAPAEHGSSAPEQAA" /product="Chemoreceptor mcpA" /transl_table=11 /note="Chemoreceptor mcpA (Methyl-accepting chemotaxis protein)., Bacterial chemotaxis sensory transducer, Methyl-accepting chemotaxis protein (MCP) signaling domain, belas" /note="High confidence in function and specificity" CDS complement(1458451..1459611) /locus_tag="Silicibacter_1359" /function="COG: ABC-type branched-chain amino acid transport systems, periplasmic component" /gene="livK" /translation="MFLKKTMLAAAAALAFPLIASAEQGVTGDSVTFAQVAAFDGPAA ALGTGMRLGITAAFEEANAAGGVHGRMLKLDSMDDGYEPDRSAALVKTVIEGNGHIGL IGAVGTPTSSATQPIATEANVPFIGPFTGAGFLRDASHGNIYNVRASYFAETEAWIEY LVDQQGMKSIAILYQDDGFGRVGLNGVTAALEKRGMSLAAEGTYTRNTTAVKKALLAI RKAKPDAVVMVGAYKPVAEFIKLARKMKLDSEFVNISFVGSDALAQELGEHGEGVIIS QVVPFPWDMSIPVVAQYTEALKAVDAAAKPGFVSLEGYIVGRLAIAGLEAAGKELTRD SYLAALAGLSTVDLGGVSMVFGADDNQGMDDVFLTRITADGQFEPIVSGGGS" /product="probable leucine/isoleucine/valine-binding protein precursor" /transl_table=11 /note="Extracellular ligand-binding receptor, Receptor family ligand binding region, belas" /note="Hypothetical protein" CDS complement(1460321..1462570) /locus_tag="Silicibacter_1360" /function="COG: Methyl-accepting chemotaxis protein" /gene="mcp" /translation="MSDLLKTVAGKLVLATGIAITVILAGYISISGWRASHQADQQVM ELATQQAGEIAQTIAVQVTQATSAGAAVSGALSGYMAGGNANTADAIELLRGVPTQYE TIFSSWMAGMPDGSTDAFLTGAEGRNESGVFTPYWTKADQGGLDFSTFDIDPTSQWFA APIETSASIITEPYLSSEGRLLTSVSVPVVVEGQTVGVAGVDIVLTDLTTMLGTLETF EGGRVMLVDSNGKWLANPDVADLTQPYDETGAELVEAALADGAPRVITGLPDGATRLV YPFTAPGMNTTWATILDVPAAVFTIPVRDAVLSSVSGGVLILLMSLGTIYFTARALVG RPLSEMLSSVNKLASGQYDEAVQGTERKDDVGTMAASVEALRERLLEKEHLEQEQDKQ QAEQARVVDTLAQSLRSLAKGDLSRTIDEEFSGSYEALREDFNLTVNTLNDMMATLSE SIMEIRARSDEISLGSDELARRTESQAATLEETVAALDEMTTSVRSAADTAANVERNI SETRKNAETSGGIVRDAVVAMSEIEKSSEKINHIINVIEDIAFQTNLLALNAGVEAAR AGEVGRGFAVVASEVRGLAQRSSEAAMDIKQLIESSSAQVASGVGLVNRAGESLTDIV DRVARVADEMSEIAAGANEQSVGLGEINTGATQLDQVTQHNAAMVEETSAAAVTLQRE AASLERQVGRFTLRARSSKPQGAAKPSAQTIKRADAVADHSAPEADMADFDIQPDVPK VANAGWTDF" /product="Methyl-accepting chemotaxis protein mcpB (H3)." /transl_table=11 /note="Bacterial chemotaxis sensory transducer, Methyl-accepting chemotaxis protein (MCP) signaling domain, belas" /note="Conserved hypothetical protein" CDS complement(1462753..1463544) /locus_tag="Silicibacter_1361" /function="COG: ABC-type polar amino acid transport system, ATPase component" /gene="xylG" /transl_table=11 /note="Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase)., ABC transporter related, ABC transporter, 3a0106s01: sulfate ABC transporter, ATP-binding protein, belas" /note="High confidence in function and specificity" /product="Sulfate/thiosulfate import ATP-binding protein cysA" /translation="MTTPKELRAQGVTPMVEMNNISISFGGIKAVDDVSVDLHPGEVV GLLGHNGAGKSTLIKVLSGAYKMDSGEIRINGNKVEITNPRDARSHNIETIYQTLALA DNLDAASNLFLGRELVTPLGLVNDAAMEAECRKIMGRLNPNFRKFNEPVSALSGGQRQ SVAIARAVYFNAKILIMDEPTAALGPHETQMVAELIQQLKAQGIGIFLIDHDVHAVME LCDRASVMKNGQLVGTVDIDDVTDDDLLSMIILGKKPGEAASEGR" /EC_number="3.6.3.25" CDS complement(1463544..1464842) /locus_tag="Silicibacter_1362" /function="COG: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components" /gene="xylH" /translation="MTDTTSQPITPQNKRNLFQQLELDVRLLGMIGAFIILCIGFNLV TDGRFLTPRNIFNLTIQTVSVAIMASGMVFVIVTRHIDLSVGALLATCSAVMAMTQTE FVPHVLGLGLNHPITWIVAVVVGLVTGTLIGAFHGWMVGYLTIPAFIVTLGGFLVWRN VAWYLTDGQTIGPLDSTFMMFGGTNGTLGTSLSWILGLVATALALLTLWNSRRAKLAH EFPVKPLWAEGALALIISGSILGFVAILNAYEIPSRRLARMFEARGEVMPEGFTQGYG LPISVLILIAVAVVMTLIARRTRLGRYIFATGGNPDAAELSGINTRMLTVKIFAIMGF LCALSAVVASARLANHSNDIGTLDELRVIAAAVIGGTALSGGFGTIYGAILGALIMQS LQSGMAMVGVDAPFQNIVVGTVLVAAVFIDIIYRKRVGAK" /product="xylose ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO0862 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1464928..1465956) /locus_tag="Silicibacter_1363" /function="COG: Transcriptional regulators" /gene="xylF" /translation="MKFLNGLSVIALSAFAASSAFAADLTVGVSWSNFQEERWKTDEA AIVAALEEAGAEYISADAQSSSAKQLSDIESLIAQGVDALIILAQDAQAIGPAVQAAA DEGIPVVAYDRLIEDNRAFYLTFDNVEVGRMQARAVLEAMPKGNYVMIKGSPTDPNAD FLRGGQQEVIQAAVDAGDIKIVGEAYTDGWLPANAQRNMEQILTANDNKVDAVVASND GTAGGVVAALTAQGMDGIPVSGQDGDHAALNRVAKGTQTVSVWKDARDLGNAAGEIAV ALAGGTAMEEISGATSWTSPAGTTMTARFLAPMPVTKENLSAVVDAGWITQEALCQGV ENGPAPCN" /product="xylose ABC transporter, periplasmic xylose-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0861 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1466049..1467356 /locus_tag="Silicibacter_1364" /function="COG: Transcriptional regulator/sugar kinase" /translation="MYPFSQGEIAAACPRWHKRAPFGGRRGRSFELARSGRLTPSSEQ RESGRQQILDVIRAQESIARIDIAQATGMSPATVTAITAELLAAGLIEEIAPELAPGA RRGRPRVALRLRGAARLIAGLKVSHHVISTVITDFVGQELASHEMPLVQGTMPVPELC AQIRRALDLTCEKGGFSIEDLSGVGLGMAGMMDADRGFIYWSSSLEERNVAFTAAISA ELPCPVFLDNDANLVAKAEHLFGEGRTCDNFIVITIEHGVGMGIVIDQQIYRGTRGCG AELGHTKVHLEGALCQCGQRGCLEAYVGDYALLREANISSGSERHTTIASLFQSAENG DVVAKSILDRARRMFAMGLANVVNIFDPSKIILAGARLSFDYLYSDKLIEEMRQWVVQ VDAPLPEVMVHDWGDLMWAKGAAAYALEEVTARTVRELANAAA" /product="xylose repressor, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0860 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1467343..1468908 /locus_tag="Silicibacter_1365" /translation="MRRPETCVWPVAALFASVAQADPQIPRFTPIEMGEHIYSGGWEH YVGGGLAVFDCNGDALPELYAAGGETPAQLFLNTSGADGALSFQPATPEALALTGVTG AYPIDIDGDGHLDLAVMRAGTDLLLQGQGGCAFHPFQGLGFQSGDHWTTGFSATWEGE NTLPTLAFGTYVDRANPEGPFGTCDDTLLYRPSGDKYGPPEALSPGYCALSVLFSDWN RTGRADLRLSNDRHYYVRGGQEQMWAMEATPRLYTEAEGWKPYALWGMGIASRDMNGD GFADVYLTSMGDQKFQLRNPEAEGPVWEDVTYGFGTTAHRPYTGGDGRPSTGWHAAFG DVNNDGLDDIFVTKGNVEQMPDAAQKDPNNLMLQQQDGLFTEAGAEAGIASLQRGRGG ALVDLNRDGLLDMAVVNRRAPLEVWQNRGPADATGGNWLLLRLGAEGPNRDAIGAFVE VTAGDRTYLREVTIGGGHAGGDLGDLHFGLGGVETVDLRVTWPDGQVSDWSTVKANQR LLLRPGRLPTPED" /product="FG-GAP repeat domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO0859 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1468928..1469911) /locus_tag="Silicibacter_1366" /function="COG: Ca2+/Na+ antiporter" /translation="MLEIGLLLVVGLALLMVGGDLLVRGAVQAAARLGVSPLVIGLTL VGFGTSTPELVTSVQAGLSGAPGIAYGNVVGSNIANILLIAGISALLCPIIVARAALR RDAVVMLLAALVFSGLAAVWPMGRLSGAALIIAMIGYITFVVRQERQNADTGALHDKG EALAGAAPGLDPAQTKSGRGLAVSLLLALGGLVLVVVGGAALVNGAVALARSFEISET VIGLTIVAVGTSMPELVTSVIAALKRQGDVAFGNVVGSNIYNILGIGGTTALIAPSDL PGDILRFDAPVMILVSAGFVLFAATGFRVGRREGAILLAGYGLYIWMIWPQ" /product="K+-dependent Na+/Ca+ exchanger related-protein" /transl_table=11 /note="identified by match to putative ortholog SPO0535 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1470095..1470427 /locus_tag="Silicibacter_1367" /translation="MTQPDLDAQTQIELEAAAFRRLRQHLMQDRTDVQNIDMMNLTGF CRNCLSRWYQEAANEKGIEMDKGQAREIFYGMTMDDWKANYQTEAGADKQEAFQKAFA ENVGTEKG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3602 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1470612..1471406 /locus_tag="Silicibacter_1368" /translation="MTRMPTFFISHGGGPWPWMPEWRAQFAPLEASLKAMPDQLPERP KAVLMISGHWETEGFAVMSSPQPPMVYDYSGFPPETYEITYAAPGAPILAARTQDLLA QAGLPTRLDPEIGFDHGTFAPMAVIYPEADVPLYQVSLQKAYDPAAHFAMGRALAPLR DEGVVIIGSGLSYHNLRAFGPGARVPSEAFDAWLNDALALDPSARTEALMNWEQAPYA RDCHAQEDHLAPIFAALGAAEQDETTRIYHQTEIFGGVTASGFRFG" /product="4,5-DOPA dioxygenase extradiol (EC 1.13.-.-)." /transl_table=11 /EC_number="1.13.-.-" /note=", Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B, Catalytic LigB subunit of aromatic ring-opening dioxygenase" /note="Conserved hypothetical protein" CDS complement(1471471..1472331) /locus_tag="Silicibacter_1369" /function="COG: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase" /translation="MTRTVYVNGDYLPETEAKVSIFDRGFLMADAVYEVTSVLGGKLI DFEGHAVRLKRSLDELDMAEPCTKEELLEIHRKLVELNDIDEGLVYLQVTRGSDGDRD FVFPSEDTKPTIVLFTQNKPGLADSPAAKKGAKIISIEDIRWGRRDIKTVQLLYPSMG KMMAKKAGADDAWMIEDGHVTEGTSNNAYFVKDGVIVTRPLSNDILHGITRKAVLRMA EEAQLKVEERLFTIDEAKAADEAFTTSASAFVMPVVEIDGVALGDGTPGPIAKRLREI YLEESIKAAV" /product="D-amino acid aminotransferase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3604 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1472342..1473307) /locus_tag="Silicibacter_1370" /function="COG: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily" /translation="MKITVTPDVFKLAQVFTISRGSRTEAKVLTVRIEDGDHVGWGEC VPYARYDETLESVTAQIEALPATFTRAELQSLLPAGAARNAVDCALWDLEAKKAGKPV WELAGLDQPGPEITAYTLSLASPEEMQKQAAENAHRPLLKIKLGTPEDMPRLEAVRAG APDARIIIDANEGWSAEVYAELAPHLLRLGVELVEQPLPAGEDEALIGMERPVPVCAD ESAHDCASLPKLKGKYDVVNIKLDKTGGLTEALKLRDAALAEGYQVMVGCMVGSSLAM APATLVAQGALVTDLDGPLLLAEDRPEPLTFDAEGVHPPRPALWG" /product="mandelate racemase/muconate lactonizing enzyme family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3606 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1473413..1474414) /locus_tag="Silicibacter_1371" /function="COG: Uncharacterized conserved protein" /translation="MIETPYLLFLGDAPDMLAAKVAIGIRDWRPDHAVGQISLPGCGA DLGLTEMTLEDAKAAGAKTLVIGVANRGGKISQEWKKVLVQALEEGFDLASGLHNLLR DEPDLAAVAEATGRTLHDVRVPSVQYPIADGVKRRGKRCLAVGTDCSVGKMYTALAMD KEMQARGMKSTFRATGQTGILITGDGVPLDAVIADFMAGSIEYLTPDNDDDHWDLIEG QGSLFHVSYSGVTMALVHGGQPDALILCHEPTRTHMRGLPDYDVPTLEELRDVALPLA QRANKNCKIVGISVNTQHLGEEEAVAYLKEVEGRMGLPAVDPYRHGAGRLVDALAAV" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3607 from Silicibacter pomeroyi DSS-3" /note="Specificity unclear" CDS 1474722..1475684 /locus_tag="Silicibacter_1372" /function="COG: Citrate lyase beta subunit" /gene="mclA" /transl_table=11 /note="identified by match to putative ortholog SPO3608 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" /product="malyl-CoA lyase" /translation="MSFRPQPTPPARPNRCQLFGPGSNTKLFAKMAASAADVINLDLE DSVAPSDKDQARANVIDAINTVDWGRKTLSVRINSLDTPYWYRDVVDLLEQAGDRLDQ IMIPKVGCAEDVYAVDALVTAIERAKGRQKPISFEVIIESAAGIAHVEAIAASSPRLE AMSLGAADFAASMGMQTTGIGGTQENYYMLHEGAKHWSDPWHWAQAAIVAACRTHGVL PVDGPFGDFSDDEGFMAQAKRSATLGMVGKWAIHPKQIALANEVFTPSDAAVAEAREI LAAMEEAKATGAGATVYKGRLVDIASIKQAEVIVAQSDLIAQNS" /EC_number="4.1.3.24" CDS complement(1476792..1477244) /locus_tag="Silicibacter_1373" /function="COG: Transcriptional regulators" /translation="MAKTDKINQQILQELGRDGRISNLELADRVGLSPSACLRRVQEL ERAGVITGYRAVLDREAMGVGFVTYIGVGLGEHTKEAQEAFERAMRSAPEVVECHNIT GTIEYLLRVECADLKSYKQFHTEILGTSPFVTAITTYVVMGSPKDQRA" /product="transcriptional regulator, AsnC family" /transl_table=11 /note="identified by match to putative ortholog SPO3612 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1477318..1477923 /locus_tag="Silicibacter_1374" /function="COG: Putative threonine efflux protein" /translation="MMTYDLLAALALFAFVSSITPGPNNLMLMASGANFGFRRTIPHM LGVALGFVFMVLLVGAGLVQVFDAYPVSYTVLKVGSVVYLLYLAWKIANAGAAKTGAD GDAGTPMTFLQAAAFQWVNPKAWAMALTAISAYTPDHTLWAILVVGVVFGAINLPSVG SWTVLGQQMARFLTSPKRLTLFNWTMAVLLVASLYPVIWPN" /product="transporter, LysE family" /transl_table=11 /note="identified by match to putative ortholog SPO3613 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1478040..1478873) /locus_tag="Silicibacter_1375" /function="COG: AraC-type DNA-binding domain-containing proteins" /translation="MAQSYEDRILRVLRYIHDNPAGDLSLDRLADVAAMSRFHWHRVF RALTGETCGQSVRRIRLHRAAVALAHSDASIEEIAATVGYPSRHSFSRAFTAAYGDAP GAFRAKGLHLPPLALRDPKELSMHNVTLRDEPARHLVTVPHRGPYAEIGRAFEHFSAL ANSRNLWPQLGPVLGVYLDAPGEMPEDQLRSYAGAEYRGDGTPEGLEPFALPGGKAAV LTFKGPYAGLAAAYDSLFGGWLPQSGETPADQPCYEIYLNDPRATAPEELLTEIVLPL R" /product="transcriptional regulator, AraC family" /transl_table=11 /note="identified by match to putative ortholog SPO3615 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1479094..1480056 /locus_tag="Silicibacter_1376" /function="COG: Acetyl-CoA carboxylase alpha subunit" /gene="accA" /transl_table=11 /note="identified by match to putative ortholog SPO3616 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="acetyl-CoA carboxylase, carboxyl transferase, alpha subunit" /translation="MTQYLEFEKPLAEIEGKAEELRALARTNEEMDVVDEAAALDKKA AQLLKDLYADLTAWRKCQVARHPERPHCKDYIEKLFTEYTPLAGDRNFADDLAVMGGL ARFNDQPVVVIGHEKGSDTKSRITHNFGMARPEGYRKAVRLMEMAGRFGLPVVTLVDT TGAYPGKGAEERGQSEAIARSTEMSLKIGVPVISVIIGEGGSGGAVAFATANRVAMLE HSVYSVISPEGCASILWKDAEKMREAAEALRLTAQDLKALEVVDRVIPEPLGGAHRDP EASYRAVGAAISEMLAEMKDMDAKALIKDRRQKFLDIGSKGLAA" /EC_number="6.4.1.2" CDS complement(1480131..1481099) /locus_tag="Silicibacter_1377" /translation="MAQYTVTAFRWSGTGYNAQYNTSYTAVITDDDAFLNGNGDSNET VSIDGGPSYVTNGAPYDINVSFTDTSGTPHVETFYFFNVNNSWYFIPGPGSAFTEGAT LGSYQSHTTAPTLYSTITCFVRGTLIETQNGLMPVEMLRPGTMVRTSDGSFKPLRLPM SRKIRPAELRANPKLAPVRIVAGALGNGLPKRDLLVSRQHRMLVSSKICERMFGQTDV LLAAHQLTVLPGIFEDNTQEDVEYFHLVFDRHEVIFAEGAPTESFFPGPEAIKAMPAE ARAEILAIFPQIQTWGFVPEPAFQIPTGKLQRKLVARHLKNNRPLL" /product="hypothetical protein" /transl_table=11 /note="Hypothetical protein" CDS complement(1481298..1481906) /locus_tag="Silicibacter_1378" /function="COG: Transcriptional regulator" /gene="betI" /translation="MSKRHQTQETAMPKLGMEPKRRAALVSAVIDEIGETRSIDVTVA KIARRAGMSSGLAHHYFGSKEQMLIAAMRFILAEFSADVRAELAKAKDPRGRLEAIIR ANFAAHVFDPRKMSAWLSFYALAQSNPQAAHLMKLYQRRLHSNLMYDLRALTPDASAV ATKLAALIDGVYLRAALNVTGDRKEAAQQVSEALESFLNAKD" /product="HTH-type transcriptional regulator BetI" /transl_table=11 /note="identified by match to putative ortholog SPO1082 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1482020..1483015) /locus_tag="Silicibacter_1379" /function="COG: ABC-type sugar transport systems, ATPase components" /translation="MTALTLTNVNKSFGNVHVLKDINIEVDEGEFVVFVGPSGCGKST LLRTIAGLEDVTSGEVCIAGEVVNQTPPSKRGIAMVFQSYALYPHLNVRNNMSLALKQ AKESKETIEERVAEASRMLSLGDYLDRFPSELSGGQRQRVAIGRAIVRHPKLFLFDEP LSNLDAALRMNTRLEIANLHEQLGATMIYVTHDQTEAMTLADKIVVLRDGRVEQIGSP MELYNNPANQFVAGFLGSPAMNFLPAALLEDGNPNTLGVRPEDLRLDDAGLLEVTSKH VEHLGGDTNVIADCHGHQITLRLFGQHAIRTGQGLRLSIAEGKSYVFDPSGARLS" /product="sugar ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO1835 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1483012..1484046) /locus_tag="Silicibacter_1380" /function="COG: Predicted dehydrogenases and related proteins" /translation="MTRVLIAGLGNMGLSHALAHHTQDGAEIVGLVNRSGQVDHPDLQ GYPVFTDFHAALEDTKPDLVVVATYSDSHADYAVAAMEAGAHVFVEKPLATTVKDARR VVATAKAKNRKLVVGYILRHHPSWVRLIEESRALGGPYVFRMNLNQQSKGAEWETHKA LMQTTAPIVDCGVHYVDVWCQITDAKPVQVNAMGLRLSDEIAPDMYNYGQFQVTFDDG SVGWYEAGWGPMMSETAFFVKDVISPKGSVSITEADKSGSSDVDGHTRVGGLLVHRPE GDQLIDLPDEPGHQALCDAEQAYMLRAIREDLDLSRHAQDAVQSLAICLAADESVRSG APVKLNEVTP" /product="oxidoreductase, Gfo/Idh/MocA family" /transl_table=11 /note="identified by match to putative ortholog SPO1836 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1484126..1484965) /locus_tag="Silicibacter_1381" /function="COG: ABC-type sugar transport system, permease component" /translation="MSSARSNPINTAAMHGALIIYTLIALFPVFVILINSFKTRKKIF REPLALPDADSFSLVGYQTVMKQGDFFLYFQNSFIVTVGSLTLILLFGAMAAFALSEY RFRGNMLMGLYLALGIMIPIRIGTVAILEMMVSTGLVNTLWALILVYTAQGLPLAVFI LSEFMRQVSDDLKNAGRIDGLSEFTIFFKLVLPLVRPALATVAVFNMIPIWNDLWFPL ILAPAEETKTLTLGSQVFIGQFVTDWNAVLSALSMAILPVLILYVIFSRQLIRGITSG AVK" /product="sugar ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO1837 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1484978..1485892) /locus_tag="Silicibacter_1382" /function="COG: ABC-type sugar transport systems, permease components" /translation="MQKPRIRWHIAIFLAPAVLIYTSVMIFPLFNTLRLALFQEIDQE RVYVGLENFRTLFFDPIWSEQFWNALGNNFWFFLIHMLVQNPIGIALAALLSHPRLRF AALYRSAIFIPTILSFVIVGFAWKLILSPIWGIAPSMLDAVGLKSLFAPWLGKEEYAL TTLALISVWQFVGIPMMLIYAALLSIPEEMLEAGEIDGVTGMSAFWKIKLPLILPSIG IISILTFVGNFNAFDLIYASQGALAGPDFSTDILGTFMYRTFFGFQLQLGDPHMGSAI AGAMFAIILVGVCLYLFGIQTRMRRYQL" /product="sugar ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO1838 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1485977..1487230) /locus_tag="Silicibacter_1383" /function="COG: ABC-type sugar transport system, periplasmic component" /translation="MKSKFMMAALTGTALVATSALAEDVTLTVESWRNDDLTLWQDKI IPAFEAANPGIKVKFTPSAPTEYNAVLNSKLDAGSAGDLITCRPFDASLALYEAGHLA ALDDMDAMSNFSDVAKSAWQTDDGSASFCVPMASVIHGFIYNKEAFEELGLEVPTTED EFFAALETIKEDGSYIPMAMGTNDQWEAATMGYNNIGPNYWKGEEGRRALIAGEQKLT DEQWVAPYATLAKWADYLGDGYEAQTYPDSQNLFTLGRAAIYPAGSWEISGFNAQADF EMGAFKAPVKSAGDTCYISDHTDIGIGMNASTEHPEAAKAFLAWVASPEFADIFGNAL PGFFPLSNAPVELEDPLAKEFVSWRGECESTIRSTYQILSRGTPNLENETWGASVAAI KGTETPEALGEKLQSGLATWYEPQQ" /product="sugar ABC transporter, periplasmic sugar-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO1839 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1487255..1488160) /locus_tag="Silicibacter_1384" /function="COG: Predicted sugar phosphate isomerase" /translation="MSTAATEQLHNQAEGLDARPLHEVAEILAEAQQEASGAARAATD PICSGATAMAQAIRAGGTLHYAAAGSSGLMAAADALELGGTFSIPAEQLRIHMAGGMP TGVEMPGGTEDETADLERALSSIGPNDVLIGVSASGTTPYTVAGAERAKAQGACVIGI ANNPNSALLGIADHAILLPTPPEVVSGSTRMGAGTAQKIALNMLSTLMAIDLGHVHDG MMINLRADNIKLRIRARQIVTRITGADEDTATAAIEAANGNVKSAILIAAGASDLADA NARLETTGGKLRPALLSLNTQEKQQ" /product="glucokinase regulator-related protein" /transl_table=11 /note="identified by match to putative ortholog SPO1840 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1488351..1489238 /locus_tag="Silicibacter_1385" /function="COG: Predicted N-acetylglucosamine kinase" /translation="MTDALKTSVLALDGGGTRCRLALCDGHSVIAVETGSANISTDMV GAVAQVRDGLEQLAVKSGAPVEALAMCPIYIGIAGVTGPEIAGRFAEALPFERVRVTD DRPTALAGALGGADGLIAHCGTGSFFAAQIDGRSRFAGGWGSVLGDPASAQWVGRRAL ACTLEEVDQLREVSELGAHLLARFGGSAEIVAFAVTARPADFGRVAPDVTAFAAKGDP LAVEILTDAAHEIAITLHKMGWKAGLPLCLTGGIAPQFRAYLPPAMQEACIAPRGTPL DGAIALAHDFAREVRDDDH" /product="BadF/BadG/BcrA/BcrD ATPase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1841 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1489225..1489980 /locus_tag="Silicibacter_1386" /function="COG: Transcriptional regulators" /translation="MTITEFLKPESWFDQGAGPRYVQLRRRLEDAIQSGVLPPNSSLP PEREIAEITDMSRVTVRKAMQELVQQGAIEQRQGSGSFVRESTARVEQSLRHLTSFTE DMQKRGMETTSKWLERGVFMPTEEEISVLGLGAEESVARIYRLREAGGQPMALERAAL PLSVLPNPLEVTSSLYATLGQIGHRPVRAVQKISALNLDSNDAKLLNVAEGTAGLRIQ RVSFLEDGRVAELTRSLYRGDAYDFVAELQLSG" /product="transcriptional regulator, GntR family" /transl_table=11 /note="identified by match to putative ortholog SPO1842 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1490055..1491083 /locus_tag="Silicibacter_1387" /function="COG: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains" /translation="MNATQTQMRREINEIPDAVERLLTEGAGAVAATAADIRDLQPSY LLSVARGSSDHASTYLKYASELLLGLPMASVGPSVKSIYGVDLHCKGALSISVSQSGK SPDIVQLTSAFRDKGAYTVAITNDAGSPLAETAAAVLPIHAGPELSVAATKTFVTSLV AGLWVLAEVKQDAALLEAILRLPGHLAKAKDCDWSAAIEAIDGQSLYTLGRGPSWAIS NEAALKFKETCQIHAESYSAAEVLHGPVSIVGENFPVIAFAAADAAEESVGEMVAALG DKGARVFATTHKAKGAEVLPHVRTDHWITDPIASIVSFYGMVEAVAARRGVNPDAPRH LNKVTETV" /product="SIS domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1843 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1491080..1492222 /locus_tag="Silicibacter_1388" /function="COG: N-acetylglucosamine-6-phosphate deacetylase" /gene="nagA" /transl_table=11 /note="identified by match to putative ortholog SPO1844 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="N-acetylglucosamine-6-phosphate deacetylase" /translation="MMHPLTTYLGGPIFDGKHVLQGFGAQFREGALVALAPVAELQEQ GEVIDLGGDLLSPGYVDLQVNGGGGVMLGDAPNVETIRKICAAHRSLGATTILPTLIT DTAEKTRATLEAGIAAHEAGVRGFGGLHLEGPHLSVARKGAHDANLIRAMDDSDLAAI CTAAARLPKLKVTVAAESVTPEQVMRMVEAGVLVSLGHTDAPFDTCVDYVRAGARCAT HLFNAMSQLGNRAPGLVGAVLDTAELSAGVIADGIHVHPASLRAAWQAKRRGPGHLFL VSDAMAVAGTEDREFLLEGRRITRSDGRLCLSDGTLAGADLDLTTALRVLVSQCDVPL AEGLEAATSVPAALIGKSVDLTQPGQKQVDMIRIKPELSAAAPVLP" /EC_number="3.5.1.25" CDS 1492383..1492841 /locus_tag="Silicibacter_1389" /function="COG: Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs" /gene="iorA" /transl_table=11 /note="identified by match to putative ortholog SPO2826 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="isoquinoline 1-oxidoreductase, alpha subunit" /translation="MKLTVNGTEYEVDVEPEMPLLWVLRDELHIKGPKYGCGIAQCGA CTVHVDGMAVRSCQLPVGALEGEVTTIEGLGTPESLHAVQAAWVAHQVAQCGYCQSGQ IMQAAALLDLNPAPTDEEIDAVMSANLCRCGTYPRIRAAIHDAAQKLSEA" /EC_number="1.3.99.16" CDS 1492845..1495109 /locus_tag="Silicibacter_1390" /function="COG: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs" /translation="MSRAGTIARRTFLIGSAAIAGGVAFGVYMAKKPIPNPLLDDLKE GEAAITPFVKIDASGITLITPRADKGQGAYSIQAYLIAEELDIDPATATLSPGIPGQA YYNGTVLSEGAPVPAYQEGFVAETLRDFMAVPAKLFSIQITGGSSTVPDGFERMRLAG ATARETLKEAAARRTGLSRAALKTREGAVILPDGTEIAYTDLAAEAAEIDPITDVALR PASEWRYLGKRDLPRLDILRKSTGTEVYGIDLDFPDMLHATVRANPAVGAGVARYDAS AAEALRGVEKIHPVTSGVGVIANNTWRAFQAAEALEIEWRKPDYPGNSEGIFTALEEA LGDPDHYDHRQRNEGDVDAALGTDGTTGDIVEARYRVPYLAHAPLEPMNAVVRVREGQ VEIWTGTQIPVFVRDRAAKIAGVSTEAVKVYVLPMGGSFGHRLEMTHVEQAVELALAV PGRHLKLTWSREEDMSHDYPRPASVAAARGKVAAGKVVAFDLSVSQSAMAPEWFGRLS GMRLPGPDATITTGAWDQPFDIPDYRVTGYRAPSMVPVSSWRSVGASSNGFYHDCFLD ELIHAAGADPLAERIRLCLHDPSRRVLEAVGEMSGWDGPSLGAGRGRGVGFCMSFGVP CAQVVEVTQTEAGIRIDRVHVAVDVGEVLDPTNLEAQVFGGVIFGLGHAMNCALTYED HAPLETNYHAYEGMRLYQAPKIEVRALSTGSRIRGIGEPGVPPAAPALANAIFAATGQ RIRELPLNKHIDFV" /product="isoquinoline 1-oxidoreductase, beta subunit, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2827 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1495122..1495739 /locus_tag="Silicibacter_1391" /translation="MQKGFAIVALASIAGTALAEGSVTLPEEGSISRSEGQAAFERIY EVVTHPRCANCHVGDDNIPMWSGPSYGAPQPHGMNINAGESRIGAEFLPCQTCHVVSD DFNTAPHAAPRFGIAWQLAPVEFEWFGKSRAEICAQLKDPERNGGRDWRGMVEHLEHD ASLNGPVAWGWSPGAGREPAPYSLDGHINDMALWGAAGQPCPSGG" /product="unknown protein" /transl_table=11 /note=", Cytochrome c" /note="Hypothetical protein" CDS 1495972..1497684 /locus_tag="Silicibacter_1392" /function="COG: ABC-type dipeptide transport system, periplasmic component" /translation="MKFIPKIARSRLVKLRVFANTAAIGLAAYVPNSSKNREKTRGGP MKTTTVLTLTSLLLASAAPLSAETLRWARSGDALTLDPHAQNEGPTHTVRHQMYEPLI IRDVTGAFEPALATEWAPKEGDPNVWVFKLREGVKFHGGEDFTAEDVVFSFERAKQAN SDMKELIGSITEVRAVDDLTVEIVTDGPNPILPSNLTNLFIMDKGWTEANNTVNVQDF EGGEITYATTNANGTGPYVLQSREPDVKTVMTLNENYWGKDQFPLEVTEIVYTPIQNP ATRVAALLSGEIDFLQDMPVQDLDRVSGADGLMVRKAPQNRVIFFGMNMGADDIEADN VDGKNPLADVRVRKAMSMAINRDAIQKVVMRGQSQPAGMIAPPFVNGWTEEMDSESKT DIEGAKALMAEAGYADGFSIRLDCPNDRYVNDEPICQAAVGMLGQIGITVNLDAKPKA QHFPLITDGKTDFYMLGWGVPTYDSEYIFNFLVHGRESDIGTWNGTGFDNDELDAKIK SLASNTDLEARNQDIADIWRVVQDEQLYIPIHHQVLNWGMSEKVDIAVDPEDQPKVKY FKMN" /product="Periplasmic oligopeptide-binding protein precursor." /transl_table=11 /note=", Bacterial extracellular solute-binding protein, family 5, Bacterial extracellular solute-binding proteins, family 5 Middle, nickel_nikA: nickel ABC transporter, periplasmic nickel-binding protein" /note="Conserved hypothetical protein" CDS 1497794..1499368 /locus_tag="Silicibacter_1393" /function="COG: ABC-type dipeptide transport system, periplasmic component" /translation="MLRLLCTAACATALVSQLPASAVAKEFSWAVTTDPQTMDPHAVN SSPVLGFLNNVYEGLVRRGKDMSIEPALATGWEPIGEGEGWRFFLREGVTFQDGSAFD AEDVIFSYERASSPESDTASWFAPVSDVVKVDDYTVDFLTNSPNPIFPDSIANWMIMD SGWAEANAASRPDKESGNYATLNANGTGAFRVTAREPGLRTVLEPYEGWWGEAEHNIT RAEMTPIQNPATALAALLSGDVDMINPVPIQDVERLQGNPDVNVVQGIEARVIMLGFG HQAEALKYSAETEDNPFGDPRVRKAVAHAVNVPAILRTIMRGNAEPVNQLVSSAMRGY SEALPGQMAYDPEAAKALLAEAGYPDGFSFGLKCPNNRYLNDEAVCQAVTAMLAQVGL KATLDAMPVQNYWPELRAGNFDMYLLGWSPGTFDAEHPIRFLAATPNTEKKLGSWNFG GYSNARVDALLPKIQSEIDDSTRQGMLDEVAQVLQDETAYVPLYVQPLVWGTRSNVTL TQRPDNFFILRWVSVK" /product="oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3774 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1499432..1500412 /locus_tag="Silicibacter_1394" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /translation="MLAYIIRRVAQSALVLLIVGLVAFAMFRFVGDPIDNMLGQERTA EDIERLRAQLGLDQPFVVQYYRFLENAVQGNFGVSYRQGRPVIDILMERAPATLELAA VSGILAIIFGIALGVFTAIKRNGIAANLIMSGSLIGVSLPTFLIGILLIYLFSVELGW LPSFGRGDVVDLGGWSTGFLTVSGLKALILPSITLGLYQMTLIMRLVRSEMLEVLRQD YIRFARARGLRDRAVHFRHALKNTMVPVITVIGLQVGAIIAFAIITETVFQWPGVGLL FINAIQFVDIPVMAAYLMLISVMFVGINLIVDILYFFIDPRLRVDRKGGH" /product="oligopeptide/dipeptide ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO3775 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1500412..1501353 /locus_tag="Silicibacter_1395" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /translation="MSETSTPAQKSRLRTALESDLFYTFKRSPVAVVSTIVVLVLVLS AVFAPLIAPTNPFDPASLNLMNGFTAPMSPNDFTGEVFLMGTDDQGRDVFSTILYGMR ISLFVGVAAVLFAMVLGITLGLLSGYLGGWVETVIMRIADVQLTFPSILVAMLIFGVA KGITPVEYRDQMAIWVLILAIGLSDWVQFARVVRGATLVEKNKEYVEAARLIGRRSGA IMLRHILPNVLSPVLVIATISLALAIIAEATLSFLGVGAPPTQPSLGTLIRIGQGFLF SGEWWILLFPAITLLGLALSVNLLGDWLRDALNPRLR" /product="oligopeptide/dipeptide ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO3776 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1501353..1502327 /locus_tag="Silicibacter_1396" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component" /translation="MADPVLSIRNLCVEIPTRHGILKPVDGVSYDIAKGEILGIVGES GAGKSMAGNAVIGLLNPPAHVSSGEIWLNGKRIDTLKGDALRRLRGKEIGMVFQDPLT SINPLLRIGDQLVETMLTHLPISKSEAEKRAVAALEEVGIPGAAKRVNSYPHEFSGGM RQRVVIALALCAEPSLVIADEPTTALDVSVQAQIIALLKRLCRERGTAVMLITHDMGV IAEAADRVAVMYAGRLAELGPVRDVITAPEHPYTHGLMASTPLASRGQKRLHQIPGAM PRLDAVPDGCAFNPRCPHAADKCRAAPAPKVDGGSAACWFPLQHEEAS" /product="oligopeptide/dipeptide ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3777 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1502327..1503292 /locus_tag="Silicibacter_1397" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component" /translation="MALVSVKNLSRVFDVSKPWLNRVIEREPKAFLTAVSDVDFEVEP QTTYALVGESGSGKSTIGRMLVGLLNPSDGNVEIEGVDLANEKDAAKVDAIRSDIQMI FQDPYASLNPRWRVRDIIVEPVAARGGKTEGLAEKLLEQVGLSVKDAGKFPHEFSGGQ RQRICIARALASEPRLIVCDEPTSALDVSVQSQVLNLMSDLKDNFGLTYVLITHDLTV VQHMADRIGVLYLGRLVEEGAPDELFERPKHPYTQMLLEAAPRMDGFGREVTPPEGEI PDPINPPSGCAFHPRCPLATDICKQQRPEMRRLGTTRVACHMAEG" /product="Probable peptide ABC transporter ATP-binding protein y4tS." /transl_table=11 /note=", ABC transporter related, ABC transporter, CP_lyasePhnK: phosphonate C-P lyase system protein PhnK" /note="Conserved hypothetical protein" CDS complement(1503329..1503952) /locus_tag="Silicibacter_1398" /function="COG: Transcriptional regulator" /translation="MSKPTSPRPRGSRDLWLDAALDLLVSSGIDAVKIMPLARAVDQT RTGFYWYFKDIGALHEAMIDTWEARNTGQIQARCEAPAQSIGAALFNLMDCWLNPALF DARLDLAIRNWARNDTRLAARLESADNARIKSVRDMFLRYGYSKEQADVRSLTTIYTQ VGYISMEVEEDPLQRLNRVPHYVEMFSGQPPTEEEIAEFMGRHQTPQ" /product="transcriptional regulator, TetR family" /transl_table=11 /note="identified by match to putative ortholog SPO0168 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1504046..1506091 /locus_tag="Silicibacter_1399" /function="COG: NADH:flavin oxidoreductases, Old Yellow Enzyme family" /translation="MSHDPLLQPFQLKHLTLRNRIMTTSHEPAYPEDGMPKARYRAYH AERAKAGVALAMTAGSAAVSKDSPPVFNNILAYKDEVVPWIRDLTEGCHEHGCAVMIQ LTHLGRRTTWNKGDWLPSVSSSRHREPAHRAFPKLVEDWDIERIITDFADAAERMKAG GMDGIELQAYGHLIDQFWSPLTNDLNGPYGADTLENRLRFPMDVLQAIRKRVGPDFIV GMRFTADEVQKGGITEEEGLEITRILSATGQVDFLNVIRGRIHTDPAMTDVIPVQGMR SAPHLDFAGRVKHETDLPVFHAARIPDVATARHAVQAGLLDMVGMTRAHMADPHVVQK LKEGREEDIRPCVGATYCLDRIYQAGDALCIHNAATGRELTMPHEIAPAEKQRKVAIV GAGPAGLEAARVAAERGHRVVVFEAQPDPGGQIRLTAQSPRRREMISIVDWRMAQCAA RDVQFHFNTWAEEEDVLAQNPDLVIIATGGLPNLELFETGQEAAHVVSAWDLIAGDVK PAGRVLIYDESGDHPGLQAAEIAAEAGAEVEVMTPDRTFAPEIMAMNLVPYMRALQEK DVTFTVTRRLLGVARQGNELVATIGTDYSNFTTQKSYDQVVLNYGALPNDDLYQALRP ASINHGEVDHDALICGQPQAITRNPRGAFQLFRIGDAVSARNTHAAIYDALRLMKDL" /product="N-methylproline demethylase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0166 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1506106..1508208) /locus_tag="Silicibacter_1400" /function="COG: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain" /translation="MSIKRRILGPIILLIVIGIVGAIWVARAAIKTQDLIQDADSAAV RTLQATERAQRIRAEIESRLSEFLEFNTIAPPDRIRRNHQRYVDAFQNVWNDLRAAPG SEAQKRMVAQVEEQFKSWNTEASIALGLIYDTHIPSRNRLDTLARRLELALVALEQEV RLSAEQVNQDARRRYAKQVVIVLVTMIGIFLVAGSAFIGFGGQLVRSLTQLAAAMERI RAGDFDTPLSDLQRRDEVGKIARGVADFSSTLRDLSEAKTHIEHLALHDQLTDLPNRR ALQDYLERSVEQARDSNARHAVLHVDLDRFKQINDLMGHAAGDQILLHAAEAMQRQIG PDDMTARVGGDEFVIVLRGHGTDSKTKAIAKRVIEEISKPVEIEGEFVNVGASIGIAY LAAGETDPARILSNADIALYIAKSEGRGRVSFYNDATRARFEGNMALLRDLRIGLDNG EITAFFQPQVDGITNEVLGFEALARWHHPKRGMLDPGVFITLAFEHGLGDRLTERIVS DAISALLEWRALGLPAPSVSVNFSAKQLRDGGLVEYLDDALFAANLQPKDIAIEVLES VLFSDGVDPALNTIAKLQDRGYKIELDDFGTGHASISNLRRFKVDGIKLDKDFVAGVD QDAEQEVILRTMIDLCRNLNIECLAEGVETEAEIAKLISLGCSRFQGYGIARPMARDA VTSWLETHYGRKPDAKVS" /product="Hypothetical signaling protein PA3311." /transl_table=11 /note="EAL, EAL domain, GGDEF: diguanylate cyclase (GGDEF) domain, belas" /note="Conserved hypothetical protein" CDS complement(1508221..1509129) /locus_tag="Silicibacter_1401" /function="COG: Cytochrome c peroxidase" /gene="ccpA" /transl_table=11 /note="identified by match to putative ortholog SPO0330 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="cytochrome c peroxidase" /translation="MFERPTRIEFPTTEPYSPQRAALGKMLFFDARLSGAINMSCATC HNPSFGWETPASRAIGAMNQPLARHTPTIENLTESEHFYWDGRIASLKEQIRGPITHP LKMNSSMRQVQRRLENISGYRRYFEIAFPDTGLTEDTILVALATYQRTLRSGWSPFDD WVEGDEDAISSSAQRGFDVFTGRGQCVSCHQGWAFTDHDFHNVSLGDDDIGRGVLDPT MRYRFKTPGLRNIALRAPYMHNGSLNSLRAVVEHYRRGGAPNTTASDIEPLTEMSDRD VNDLIAFLETLTAYAPHVSAPALPVD" /EC_number="1.11.1.5" CDS 1509313..1509429 /locus_tag="Silicibacter_1402" /translation="MSEKQRKYQIQFDFTPSLFLSPRPENAGAARPQRYGRS" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1509787..1510632 /locus_tag="Silicibacter_1403" /function="COG: Flagellin and related hook-associated proteins" /gene="fliC" /translation="MSSILTNNGAMVALQTLKVVNTNLTDTQNAISTGKEIGVAKDNA AVWAISKTMESDIASFEAIEEGLSMGEATVAVASAGAEQIVEKLVEIKELIVSAQAEN VSHDKIQTDIESKIDQIESIIGAAQFNGANLLANTIDGTATQMGVLASLDRVGAGGTV TGVDITIEAQGFESTLDLANSLTAITDTATAASALGEIEDFLQVAISGAAELGAAAAR IDDQASFVSKLVDSMTMGVSTMTDTDMEEASARLSALQTQQELAVQSLGIANQAPQAL LQLFN" /product="Flagellar filament 33 kDa core protein (Class B)." /transl_table=11 /note="Flagellin, N-terminal, Bacterial flagellin N-terminus, belas" /note="Conserved hypothetical protein" CDS complement(1510775..1512397) /locus_tag="Silicibacter_1404" /function="COG: Arylsulfatase A and related enzymes" /gene="betC" /transl_table=11 /note="[EC:3.1.6.6], Sulfatase, Sulfatase, belas" /note="High confidence in function and specificity" /product="choline sulfatase" /translation="MLLLTDESIKTSLRQSTPSAHGLHAAARPETPRTPAMTLPNILI FMVDQLNGTLFPDGPAEWLHAPNMKKLAARSTRFRNCYTASPLCAPGRASFMSGQLPS ATGVYDNAAEFASSIPTYAHHLRRAGYYTCLSGKMHFVGPDQLHGFEERLTTDIYPPD FGWTPDYRKPGERIDWWYHNMGSVTGAGVAEISNQMEFDDEVAFHATQKIYDLARGKD ARPWCLTVSFTHPHDPYVTRKKYWDLYEDCPHLMPEVADLGYENQDPHSKRIFDANDW RNFDITEEDIRRSRRAYFGNISYLDDKIGEVMEALEGTRQDKDTIILFVSDHGDMLGE RGLWFKMSFYEGSSRVPMMISAPNMTPGLVCDPVSNIDVCPTLCDLAGVSMSEVMPWT AGESLVPLGQGGTRSTPVAMEYAAEASYAPMVSLRSGRYKLNLCALDPDQLFDLDADP HERVNLAKDPTHHEAYQALKAIAAERWDLDRFDADVRASQARRWVVYEALRQGGYFPW DYQPLQKASERYMRNHMDLNVVEDQARYPRGE" /EC_number="3.1.6.6" CDS 1512572..1514605 /locus_tag="Silicibacter_1405" /function="COG: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain" /translation="MLCGRKQQGTKRSSGADLYTFAISLLLSVLPVSSAAQSSDGVEP GVAFRSGLRGPDAIEPSQVHLPTSVGDALALPTSPFAYVLYGLSAIAVLAIVLAEVLR RVRRTRDTAQAQPVAPKAPETRPKGDSLALLDGEARVIDANRRFEYEAGMPLAQIRGR PIWSIHAKGFGKCFWDGAIQEALTEGAWQGEARTLSDDLHPETETLSLRAFNVSGADP TYEFRSRRSFRPKSDRAGLLDSGLRDALTGLPSRRAMKTQVEFAIVRAKAATAELAII LIDLDRFRDINSIFGDDIGDRVIERLADAVRSVMRPGITIGRIGGDEFILLIEQASSP EVVLQVAHDIGAALGDEVVVDGLTCRLSASMGIAQYPKDGSDQRNLMQAAGVSLCHAK AKGRGQICFYSENMEQRSEESLQMEHDLKRAISDGELLMFYQPQIDLRTGQCIGAEAL LRWQHPKKGLLLPGGFVPLALDTGLTTAIDQFVTDEVCRQIRAWNTEGYAPAKISVNM SAMTLLSPDFARDLRSTARHHQVDLTQLEIEVLETTLFPRMRSSLNTVDDLRTMGVKL AIDDFGTGYSSLAMLKDLPIDRIKLDRRFITSLPENVKDDRIVAAVVAMGRSLGVSVI AEGVETREQRDRLISLGCAEAQGYLFSRPVPAAQFAETWLRYARPKPYVGSDA" /product="Hypothetical signaling protein CC0091." /transl_table=11 /note="EAL, EAL domain, GGDEF: diguanylate cyclase (GGDEF) domain, belas" /note="Conserved hypothetical protein" CDS 1514815..1515861 /locus_tag="Silicibacter_1406" /function="COG: TRAP-type C4-dicarboxylate transport system, periplasmic component" /translation="MTTRRALLGAATALAFSAMGAVPAFAQEVTLKLHQFLPAQANVP KLILDVWADKIEDASGDRIKIDRYPSMQLGGKPPELIDQVQDGVADIVWTVVGYTPGR FPSTEVFELPFMMTNARAASHAYWDMMEDHWLDTEFKDFKILAGWVHGPGIFHTSDPV EVPKDLEGMKIRGGGRSVNALLTELGATPVGMPVPSIPEALSKGVIDGTTIPWEVTTA LKVPELVENHTEFSGRALYTLTFVLAMNKEKYDSLPDDLKKVIDDNSGVEMSVFAGGT MADSDMPARENALDLGNNVITLDADQTAVWRERSQPIYDKWLADMSERGIDGQALLDE ATMLIDKYTPQYEN" /product="TRAP dicarboxylate transporter, DctP subunit" /transl_table=11 /note="identified by match to putative ortholog SPO3693 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1516402..1518036 /locus_tag="Silicibacter_1407" /function="COG: TRAP-type C4-dicarboxylate transport system, large permease component" /translation="MGLRAEPDRGRRGRCCRDLHGGDPQHRSNDRPDPDLGRRGGTVV SALEIGIWSFPVLMGLIFLRVPIGLSMFLVGLGGLVLVTGDTIVAFGRLKNETYSTFS SYSLSIIPMFFLMGQFATLGGMSTALFKAAEGFIGHRKGGVAMAAIGACAGFGAICGS SLATAATMGRVALPELKNYGYASGFSTATLAAGGTLGILIPPSVVLVIYAILTEQNIA KLFLAAFIPGLLAAIGYVIAISVYVRLFPESAGTREPIPWRERFSLLFAVWPVLLVFG LVVGGIYAGWFTPTEGAAVGALGTGLIALANGGLTRQTLTDSFMITARSTAMIFFIVL GAGFYNGFLALTQVPQELANFVVAQGLSPWMVLALILVFYLLLGCLMDSLSMILLTIP IFYPVISAMDFGLVSLPAMQADAAMEVLRAGVPDGMGQEMLASIKDAIANGTELTREQ MKELGIRVTQGIANRLETEYVAIWFGILTLIVVEVGLITPPVGMNLFVINAMDPKSRM VDTYKAVLFFVGSDLIRVVILVLFPVITLLPLMLLY" /product="TRAP dicarboxylate transporter, DctM subunit, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3695 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1518107..1519132) /locus_tag="Silicibacter_1408" /function="COG: Transcriptional regulators" /translation="MTNDSKRPLTLRDVSDATGVSEMTVSRVLRNRGDVSEKTRQKVL EAAKELGYVPNKIAGALASKRVNLVAVIIPSLSNMVFPEVLTGINRVLEDTELQPVVG VTDYQPEKEEKVLYEMLSWRPSGVIIAGLEHTEPARAMLAAAGIPVVEIMDTDGNPVD SMVGISHRRAGREMAKAILKAGYSHIGFMGTKMPLDHRARKRFEGFTEALAKEGVEIE DREFYSGGSALAKGREMTQAMLERSPELDFLYYSNDMIGAGGLLHLIDQGIDVPGQIG LAGFNGVELLAGLPRQLATMDACRQEIGMKAAQIIAAQLEDSNAEIEKHVTLTPTITY GDTLKRR" /product="transcriptional regulator, LacI family" /transl_table=11 /note="identified by match to putative ortholog SPO3684 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" tRNA 1519257..1519330 /locus_tag="Silicibacter_63" /gene="Silicibacter_63" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS 1519450..1519551 /locus_tag="Silicibacter_1409" /translation="MQKACSLKAVFVAKVWLVGAFVDVIPENAPVFD" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1519596..1519862 /locus_tag="Silicibacter_1410" /function="COG: Transposase and inactivated derivatives" /translation="MKASKFTDAQKAFIIKQAEDGTSVAEVCRKAGISTATFFNWKKK YAGLMPSEMKRLRELEQENARLKKIVADLALDKEMLQDVIKRKL" /product="Insertion element ISR1 hypothetical 10 kDa protein A3." /transl_table=11 /note=", Transposase IS3/IS911, Transposase" /note="Conserved hypothetical protein" CDS 1519895..1520692 /locus_tag="Silicibacter_1411" /function="COG: Transposase and inactivated derivatives" /translation="MRADWQVSIRRACEVIRFDPRTYRYKSRRPGQAALEQRIREICQ TRVRFGYRRVHVLLRREGWEINAKKTYRIYKELGMQLRSKTPKRRVKAKLRDDRKEAV SPNDVWAMDFVHDQLATGWKLRVLTVVDTFSRYVPVLDARFTYRGEDVVATLEQVCKR TGYPATIRVDQGSEFISKDMDLWAYANDVTLDFSRPGKPTDNAFIEAFNGRFRAECLN AHWFMSLEDAAEKLEAWRRDYNEERPHGAIGNKVPADLMKSVHDTSP" /product="Insertion element IS476 hypothetical 39.2 kDa protein." /transl_table=11 /note=", Integrase, catalytic region, Integrase core domain" /note="Conserved hypothetical protein" CDS 1520803..1520970 /locus_tag="Silicibacter_1412" /translation="MTEQTYYCWKKKYGGVGTEQLRELKRFQKENEQLCKAVSDRTLN KLILVEAAKGV" /product="Insertion element ISR1 hypothetical 10 kDa protein A3." /transl_table=11 /note="Conserved hypothetical protein" CDS 1521006..1521263 /locus_tag="Silicibacter_1413" /translation="MQAPKRAEPPWLNDGSCLRLRPERRDHVLSYDFVHCRTEDGKAF RTLNIADEYSRECLAIRVDRKLNSGNVIGVMNNLFTLRGLS" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1521614..1522138) /locus_tag="Silicibacter_1414" /function="COG: FOG: CBS domain" /translation="MPASFTPKTRGSETSDKKTSSQTLDTNMSAARATVGDVLASKNG ELYWINPEDTVAKAVEVLRDRGIGALLVKNAQGDLVGILSERDIVRRLADTPGATLPQ TVEGLMSRDVITATTDQSVVEVLRLMTDGRFRHMPVLEQEQLVGMITIGDVVNFRLTA LEYEALQLKQLIVG" /product="CBS domain protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0034 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1522217..1522399 /locus_tag="Silicibacter_1415" /translation="MTDLTLSPAGATVLFVIACLAGYRYRTVWKAEGPRLQLWIFGLI AAFCLLTLGFVPLKAQ" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1522454..1523464) /locus_tag="Silicibacter_1416" /function="COG: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components" /gene="rbsC" /translation="MTTQILPLNPFGVIRKIFVRVGVLPFFLLAALVVFSLLSPKFLT GQNIVNVMRQSVYLVLVSLGQMLVLISGGFDLSVGTAIALTSVVSATAMVWLAGIFPD AIFLVILLGALAGLLAAACVGLLNGIGVAYFDVSPFIMTLGASSLAGGAALLLTGGVP VSGLPFAFADVFGFGRLWGVPVPVIVAMICIAVMWVFMSRTSLGTQVYAVGGNIKAAH LSAINTKRTLMMTYVGCALIAALTGLLLTARVESGEANLGGSLTLESIAACVIAGVSL RGGIGRVENVVLGGFFIVLVQNGMNLAQVSSYMQMVLLGALLILAVIFDQLRYRMIMG TN" /product="Ribose transport system permease protein rbsC." /transl_table=11 /note=", Bacterial inner-membrane translocator, Branched-chain amino acid transport system / permease component" /note="Conserved hypothetical protein" CDS complement(1523461..1524963) /locus_tag="Silicibacter_1417" /function="COG: ABC-type sugar transport system, ATPase component" /gene="rbsA" /translation="MSKLIETRGLTKKYPGVVALDHVDFDLEPGEVHVLFGENGAGKS TLISMLAGANAPSEGRLLLNGEEVQFESVADAQAKGIYTVFQEFSLIPTLTVAQNIFL GWELRFGPFLDHRAMRARAREMLAELGFDIDPAAIVAQLSRAQQQMVEITKAFHGDLN VLILDEPTASLTDREVDHLFEFVAKLKAQGVGIVYISHRIQEFERIAERVTVLRDGAV IGTVAMAETDEDALVEMMTGRAFDQIYPSITFSPGETLLEVSDLTAPGISGACFQVRR GEVLGVAGLVGSGKSRLFRAVMGLTPVQSGSIRFKGADITNAPTRKIITRGMYYLSPD RKAEGLDLAKNARDNLAVNIISGQRHSGHGPFIPWGAVNARIDQISDHVELHAGYRSK PTSQLSGGNQQKVLFGKCFGQDADLIIFDEPTVGVDMGTRAALYLLIKELAEAGKAIV VISSDLPEAMNIAHRLLVLAHGTITARLSADEMSEDTVLKYFFDETGASQ" /product="ABC transporter protein, ATP binding component" /transl_table=11 /note=", ABC transporter related, ABC transporter, ABC_phnC: phosphonate ABC transporter, ATP-binding protein" /note="Hypothetical protein" CDS complement(1525025..1526095) /locus_tag="Silicibacter_1418" /function="COG: ABC-type sugar transport system, periplasmic component" /gene="torT" /translation="MKLFLNTASALLLSVALPATAQEAWFPYPAEEVTPAFSADGSVA EITYEPLAAAEKPWNICVSFPHMKDAYWLGVDYGVVAEAERLGVNLNVVEAGGYTELN TQISQIEDCVASGADAVIVGAISYDGLNNVISEVAGKGIPVIDVINGVSSTEIAAKSL VSFRTMGFETGKYLAEKHPAGADPVTVGWFPGPAGAGWVEAANTGFMAAVEGSAVKVL EPRYGDTGKEAQLKLVEDVLQANPEISYIAGTAVTAEAAQGVIRERGLKGEVDILAFY MTPGVYSGIQRGFITGAPADSMVIQGRVAVDQAVRVLEGKDYLKHVGPKIFVVDQDNV KDVARENILPPDGFSPVFSVTQ" /product="D-ribose-binding protein precursor." /transl_table=11 /note=", Periplasmic binding protein/LacI transcriptional regulator" /note="Conserved hypothetical protein" CDS complement(1526187..1527158) /locus_tag="Silicibacter_1419" /function="COG: Allophanate hydrolase subunit 2" /gene="dur1" /transl_table=11 /note=", Urea amidolyase [Includes: Urea carboxylase (EC 6.3.4.6); Allophanate hydrolase (EC 3.5.1.54)]., Urea amidolyase-related protein, Allophanate hydrolase subunit 2, urea_amlyse_rel: urea amidolyase-related protein" /note="High confidence in function and specificity" /product="Urea amidolyase" /translation="MTLEIVKPGLATTVQDLGRPGYFHLGIPEGGAMDRLALRAANML VGNEDGAACLEAVFMGPEVKFGADMTVAVTGAELPVLLDGMPRNTWSSISVKAGQVLS FGFLKEGARIYIAVSGGIDTPPALGSRSTYAIGALGGFEGRPVAAGDVIPLGRGAGMP EGRIVPDALRRRPAKPAALRVLPGLYWHRLTEKSQAAFFEDDWTVAPEADRMGYRFRG GQAMEFVDRDQPFGAGSDPSNIVDGCYSYGSIQVPGGLEPIVLHRDAVSGGGYFTLGA VISADMDLIGQLQPNTPVKFMRVDMDQALAARKARKETIEQIRQALS" /EC_number="3.5.1.54" CDS complement(1527148..1528023) /locus_tag="Silicibacter_1420" /function="COG: Allophanate hydrolase subunit 1" /translation="MKTRYTYGGDEHVYVEIDDEMSLDAFFIALSLSKLVREANIPGV TEICPANASFEVRFDPDVIAPDEMMARIRELEGAAKAQEKRLDTRIIEIPVFYEDPWT HETLMRFRERHQDPSGTDLDYAARINGYDDAAAFIEAHHSQPWFVSMVGFVSGLPFLY QLVERQKQLEVPKYLRPRTDTPKLTVGYGGCFSCIYSVRGAGGYQMFGITPMPIFDPE QKISYLKDFMVFFRPGDIVKWKPIDRAEYDAITAQVEAGSYVPKIAEVAFDLDAFNKD MTGFNAKLMEALNDA" /product="Urea amidolyase" /transl_table=11 /EC_number="3.5.1.54" /note=", Urea amidolyase [Includes: Urea carboxylase (EC 6.3.4.6); Allophanate hydrolase (EC 3.5.1.54)]., Protein of unknown function DUF213, TIGR00370: conserved hypothetical protein TIGR00370" /note="High confidence in function and specificity" CDS complement(1528020..1529396) /locus_tag="Silicibacter_1421" /function="COG: Biotin carboxylase" /gene="accC" /transl_table=11 /note=", [EC:6.3.4.14] , Pyruvate carboxylase subunit A (EC 6.4.1.1) (Pyruvic carboxylase A)., Carbamoyl-phosphate synthase L chain, ATP-binding, Carbamoyl-phosphate synthase L chain, ATP binding domain, accC: acetyl-CoA carboxylase, biotin carboxylase" /note="High confidence in function and specificity" /product="biotin carboxylase" /translation="MTIQRLFIANRGEIAVRIIRAAQALGIHTIQAHSEADADMLAVK LADEAVLIGPAPAKDSYLNIAAILNAAKDTGADAIHPGYGFLSESPTFVRAVEDAGLI FVGPSADTIERMGDKVAARQAAEAAGVPVVPGSKGRVDTVAEAVAIAEEIGFPVMIKA AAGGGGRGIRVATTAQELKSLAPQAKAEAEAAFGDGGLYVERAILSPRHIEVQILGDG ENAVHCFERECSLQRRRQKVWEEAGADCLDEQTRAALCASAVALAKAVNYRGAGTLEY LYDAASNEFFFIEMNTRIQVEHPVTEMITGVDLVAEMIKVCAGAKLSMTQDQITRTGH AIEVRLCAEDPFMDFMPWPGQVKSLKIPTGEGVRFDHFLSEGYQIPPFYDSLLGKVIV HAETREAAIDKLVVALTELDIDGTKTTAPLHLALAADPDVRAGAFHTQWLEPWLEAGN LTAKGDAA" /EC_number="6.3.4.14" CDS complement(1529400..1529633) /locus_tag="Silicibacter_1422" /translation="MSDIQSPLPGTFYHQASPEEPPFKVKGDAVAVGDVIGLVEVMKT FIQVNAEEAGTFVQYRVGNATPVTAGDVVAELE" /product="Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor" /transl_table=11 /note=", Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplast precursor (BCCP)., Single hybrid motif, Biotin-requiring enzyme" /note="Specificity unclear" CDS complement(1529670..1530449) /locus_tag="Silicibacter_1423" /function="COG: Uncharacterized proteins, homologs of lactam utilization protein B" /translation="MRKIVDLNCDMGEGFGHWVLGEAPDDQLMELISSANIAAGFHAG DPNSMDRVIKLANHYGVGLGAHPGYRDLQGFGRRYIDTTPEELVNDIIYQVGAVREFG RRHGIRLQHVKPHGALYMEAARNEDLSRLMIESLAAISGDLIVYCMDISKTCAIAQRL GHPVVREFYADRDYGKDGSIVFTRKVGRLSPEAIAQKCLRACLEGKVTTVEGHDIDIA FESICFHSDTPGAVEIGRAIRRVLTENNITIAPSSAVLQAA" /product="Hypothetical UPF0271 protein PYRAB09930." /transl_table=11 /note=", LamB/YcsF, LamB/YcsF family" /note="Conserved hypothetical protein" CDS 1530729..1531646 /locus_tag="Silicibacter_1424" /function="COG: Transcriptional regulator" /translation="MNLRQLKYFLATAELGQVSRAASELSISQSSVTTAIRELEQSMG TTLFNRTAHGMDLTPTGRDLMSAARDVMEKVQIAQDIGQNHSDVTGTINIAATYTVCG YFLPYHLDRLSHRFPNLTINISELNRESIEEGLISNRFDVAVILTSNTSNPELATQTL MRSHRRLWVPQNHPLAGREFASFEDVAAQDYIMLTVDEAANTSMKYWGPTGLMPRVRM RTSSTEAVRSMVANGLGVTILSDMVYRPWSLEGRRISTVVMDREIPSMDVGLAWRRNQ EMPNAARHFVDYFRNAYLSPQMAHTAWRG" /product="transcriptional regulator, LysR family" /transl_table=11 /note="identified by match to putative ortholog SPO0659 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1531643..1532215) /locus_tag="Silicibacter_1425" /function="COG: Predicted transcriptional regulators" /translation="MNISNAQGADEDLGPRLRSVREKANLSQRALAKKTGVPNSTISL IESGKMNPSVGALRRILDGIPISLSDFFAFEPETEKASFYAAEDLTEIGKGKVSLKQV GANLFGRQMMILYETYEIGADTGRVMYGHEGEEGGIVLSGRIEITVGAQRKILGPGDA YYFDSRAPHRFRQVGPEKCVLVSACTPPTF" /product="DNA-binding protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPOA0273 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1532362..1533639 /locus_tag="Silicibacter_1426" /function="COG: 4-aminobutyrate aminotransferase and related aminotransferases" /gene="gabT" /transl_table=11 /note="identified by match to putative ortholog SPOA0274 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="4-aminobutyrate aminotransferase" /translation="MLNAEISIRRNAAISRGVGMQTQVYVSRAEGAEVWDVEGHRYID FAAGIAVVNTGHCHPKVMEAVRSQSAAFTHTCHQVLPYESYIRLAERLNDKVPGNFDK KTAFVTTGAEAVENAIKIARAATGRSAILAFGGGFHGRTFMGMSLTGKVAPYKKGFGA MMPDVYHVPFPVDLHGISTADALGAIDRLFKADLDPDRLAAIILEPVQGEGGFYPAPK ELMHALRELCDAHGILLIADEIQTGFARTGHLFAMEGYDVAPDLTTMAKGLAGGLPLA AVTGRAEVMDAAAPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLCTRANALGARLKQRL SAIQERVPEIADIRGPGFMVAAEFNTTDGSAPNPEMANAIRTEALERGLVLLTCGVYG NVIRFLAPITIPDAVFSEALEILEASILAAKDA" /EC_number="2.6.1.19" CDS 1533641..1535110 /locus_tag="Silicibacter_1427" /function="COG: NAD-dependent aldehyde dehydrogenases" /gene="gabD-3" /transl_table=11 /note="identified by match to putative ortholog SPOA0275 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="succinate-semialdehyde dehydrogenase" /translation="MSTPTSLSLRDPSLLETRAYVNGQWINGATTFDVIDPATGRLVA EVADLDVAAAAKAVDAAHAAGPSWAALAGKERSSILRRWHDLLVENADDLATILTAEM GKPWAEARGEILYGASFIEWFAEEAKRIYGDVIPGPQRDKRIMVLKQPIGVVGSITPW NFPNAMIARKVGPALAAGCTFVARPAELTPLSALAMAVLAERAGIPAGVFNVIPSNDA PGVGRELCTNPKVRKITFTGSTRVGRILMEQASGTIKKMSLELGGNAPFIVFDDADLD AAVEGAMIAKFRNNGQTCVCANRIYVQASVYDAFAEKLAGEVKSLQVGNGFDDATTAG PLINEAALRKVEAHISDAVGKGARIVTGGHRSDLGGTFFEPTVLRDVNPHMVVCHEET FGPLAALVRFDSEEEVIALANDSEFGLAAYFYARDLSRVWRVAESLESGMVGANTGLI STEVAPFGGIKQSGLGREGSKYGIDDFVELKNICLGGMS" /EC_number="1.2.1.16" CDS 1535266..1536480 /locus_tag="Silicibacter_1428" /function="COG: Transcriptional regulator/sugar kinase" /gene="xylR" /translation="MADPLNLSRRMTLSNIVQAITTYGPVSRASVAKMTGYSKQTVSE VVSSLEDDGWVQTVGRTEGNVGRRAVVYEIVPNAALVASVDLGGTKVRVALCNLSGAV VEELAEPTCQDGGEAVVDQIARIVGLAARAHGIAQEKVRVVVVGVPGAPDAETGSIQM APNIAGIDEIDFPTLLNQRLGIEVLVENDVNLAALGEHWMTHQGETDDLVYLSIGTGI GAGVVIGGQLVRGARGAAGEVGFIPFGADPTEPESRQIGALERMAATSAIVNGYLAET GAQKTVPEIFEAHLAGEAAASRVLQTTAAYIARAIGTIAAVIDPKCIVIGGSIGARPE LIQMIEREIARSFPRDIPIETSVLGNHAALAGGASVALSRLHIALFSSGLPNANIVIP PPEISAFREGVA" /product="transcriptional repressor of the xylose operon" /transl_table=11 /note=", ROK, ROK family" /note="Hypothetical protein" CDS 1536477..1537727 /locus_tag="Silicibacter_1429" /function="COG: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases" /gene="argE" /transl_table=11 /note=", Acetylornithine deacetylase (EC 3.5.1.16) (Acetylornithinase) (AO) (N- acetylornithinase) (NAO)., Peptidase M20, Peptidase family M20/M25/M40, DapE-ArgE: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase" /note="High confidence in function and specificity" /product="Acetylornithine deacetylase" /translation="MSCDLSKRLLDLQDRDADIALLQQALGCESVTGNEANFAPFLMS QMGELGLAPKRADFLPGRPNVWGRKPGSGDGPTLMFAGHTDTVHVRGWSEKWAGTVKE DPFAAPLINGEIWGRGACDLKGGICASLAAMRLLERAGVTLRGDVTYAFIGDEESGES GTGVSAGAADLVTRIQSGEITTPDFAVYVEPTCLDVYTAQIGFFIADVKITGTSAYFG TPEKGVDALRATHALLAAIWRHQEELALGPKHDLVGTSNILVTEIKGGGYIAVPGECE LSLIRKLRPGEDLDAAVAAFEAVIDAVAVEEGIKIRISYPAGRDHPYGGSPVEIAPDH GDALSLGRCIQDTHKARGKIAGAPYWSETPFLVNQIGCPAVYCAPGDISVAHTFEERI NVEEYLAAIRAYALFMTRYCGTNE" /EC_number="3.5.1.16" CDS 1537743..1538795 /locus_tag="Silicibacter_1430" /function="COG: Transcriptional regulators" /translation="MKHYLSTVALGAALALATSSAFAQTVGPKGEAATPTASIMVEDG DLETIRSGNHTAALLWHDQSDFVNAVTAGATDELARAGIEVVATASAGFDAAKQRSDI ETALSKDPSIILSLPLDPVTSAAAFEEAKENGVKLVFLSNVPSDYEHAKDYAAIVTDD LFQMGKQAADALAASMGGAGTVGWIYHDADYYVTNQRDNAFKTTIENDYPEISIVAEQ GISDPARAEDIANAMLLRNPDIGGIYVTWAGPAEGVLAALRANGNDTTKVVTLDLSEP VALDMVRGGNVAAIVADEAYELGRAMAAAAILDLLGKDVPPFVVAPAVTVTAENVAEG WMRSLHIDAPKSVTGN" /product="HTH-type transcriptional repressor purR" /transl_table=11 /note=", HTH-type transcriptional repressor purR (Purine nucleotide synthesis repressor)., Periplasmic binding protein/LacI transcriptional regulator" /note="High confidence in function and specificity" CDS 1538977..1539930 /locus_tag="Silicibacter_1431" /function="COG: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components" /gene="rbsC" /translation="MTAIKQRFSGFDFQQTVVYFGFVAIFLFFAITLHDDGFLTQRNL TNIVLQTAPATIMAIGLVFALSAGEIDLSFGSIVAVSALTVAVVLREHPMIVGVAAGL GVGILIGALNGALVAYLKLPSFLVTLATMGLFAGIARSMTDLRSVPVMNDSFTGLFGS GKLFSVPSLLIWTVIAVGLGHIVYRHTRFGAHVLATGDNPRAAQVTGIKVPRVRLYVM MICGGTAGLAGLLYAGRLQAAKYTLGESDLMTVIAAVIVGGTALKGGKGSVIGALLGS LLMGMLNNGLILMNLKVSDQMIVRGLIILLAVAISLRDTSR" /product="Ribose transport system permease protein rbsC." /transl_table=11 /note=", Bacterial inner-membrane translocator, Branched-chain amino acid transport system / permease component" /note="Conserved hypothetical protein" CDS 1539944..1541155 /locus_tag="Silicibacter_1432" /function="COG: Predicted amino acid racemase" /gene="yhfX" /translation="MFLDVLIRRNPSFIEAAQALHQQGLIPPNSYVLDLDKVESNARY FASEAGKLGLKTFAMTKQVGRHSGFCQAVMRGGIEKSVAVDLDCAVSCDRAGMKTGHL GHLVQVPRVHVDLAARDLRPDYWTVFSNDKAREAAAAAHRAGREQNLLARIQTSGDVF YRGHEGGFAAEDICAVADMLEALEGGAFAGITTFPALLFDQDTRKVKPTPNLQTLAKA REALAAAGRDRIEVNAPGTNSAVVLSALAEAGATQCEPGNALHGTTPLHAVEDLPEDP AVLYLTEVSHNHGGNAFCFGGGLYIDPVFPKYDVKALVSSEPTTAASALASVEIPDYS AIDYYGMIDATGRVKPKTGDTVVFGFRGQAFVTRANIVGLSGVSRGTPKVTTIENIFG QAAGWPEKAIS" /product="Hypothetical protein yhfX." /transl_table=11 /note="Conserved hypothetical protein" CDS 1541152..1541895 /locus_tag="Silicibacter_1433" /function="COG: ABC-type polar amino acid transport system, ATPase component" /translation="MSNEPAVLSLKNIHKAFGGVIAIQDFSLDLRAGEIVALVGDNGA GKSTLIKIISGVYTPTSGKIELDGEETSFGDASSARSKGIEVVYQDLALADQQPVFMN MFLGRELTKPPFGLLDKARMRQESQDLVDELDVRIPSASSTISDLSGGQRQGIAIARA THWASKLVLLDEPTAALGVAETGKVETLIESLKRKNLAILIISHSLDQVFKLSDRICV LRRGEQIGIRNTAETDKNEIVSMITGVAG" /product="sugar ABC transporter, ATP binding protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0255 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1541929..1542732) /locus_tag="Silicibacter_1434" /function="COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /translation="MTDLRGKTALVTGSVQGIGLAIAEALAGAGARIAVHGLADAAQA QAAVDALRAAGAPEARFFDADMRDVAAIEAMMDDINAWGGLDILVNNAGIQKTARLAD LDTETWDAIIGVNLSGAFHTMRLALPKMAEKGYGRVINIASVHGIVASVAKVPYCASK FGLVGMSKVAALEYAAAGSKREGGITVNCIGPGWTETAIIKPQVEARAAQFDGDRDKG IADLLAEKQPSRRTSDPSEIGALALWLCAPVAHNVTGTVIPVDGGWTAQ" /product="3-hydroxybutyrate dehydrogenase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1015 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1542729..1544561) /locus_tag="Silicibacter_1435" /function="COG: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /translation="MLHDRRVDDLRGDGTGRARPWRGSCRERCDAAGRAAAGQPVGRI EGQGASRRGHRRIDACSGRAAGLGAGRRPAGGRRRTGLCLQHGRLRRRQLLLDPGSQD MNPAEWLKRTATRYPDRPALYAGETLRATYAAFDNSAAAIGAALEARGVGPGARVAIF MSNRTEYLETLYGVWYAGAAAVPINAKLHPKEVMWIVADTDAALVISDDALGVGLAPL LEGRQMLSVDSADFATMRKGARMPAPVGLVPSDVAWLFYTSGTTGKPKGVALTCGNLA TMTFTYFADVDDVRAEDAILYAAPMSHGAGIYNFMHILRGARHLVPESGGFDPAEILT LGKSMGPISMFAAPTMVRRLVDVAKAKGETGAGLRTIVYAGGPMYEADILDAVDVMGA RFIQIYGQGECPMGITVLPRSTVADRAHPRWRERLNSVGTAQSAVQVRIVDQDGAELP RGEIGEIVVQGATVMPGYWQKPEATAKAIREGWLWTGDMGRMDADGYVTLQDRSKDMI ISGGSNIYPREVEEVLLSHPDVHEVAVVGAADPEWGEVVVAFVVACAGRAVTSGALDA LCLDRIARFKRPKAYRFVEGLPKNNYGKVLKTELREELKKDIAT" /product="AMP-binding enzyme" /transl_table=11 /note="identified by match to putative ortholog SPO1014 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1545496..1546053 /locus_tag="Silicibacter_1436" /function="COG: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain" /gene="tcs2" /translation="MEPLSTLAFESAPVGLIYAEDRVIKLCNTRFSEMFGYRKAELEG HSLSKLYPSSDEFQRIGQIGVEKMRGLGRYADERIMRRKDESLFWCRVRGQSLAPQDP FAQSVWSFADISEKRPVTEMTRRERQVAKMLAEGLTSKEIARGLEISPRTVEVHRARL MDKFGARNGLELVAHLAGLPLGGTS" /product="Fimbriae Z protein." /transl_table=11 /note=", PAS, Bacterial regulatory proteins, luxR family" /note="Conserved hypothetical protein" CDS 1547033..1547263 /locus_tag="Silicibacter_1437" /translation="MAIRVDRKLDSGNVIDALSDLFIPRGVPSIIRSDNGPLATGLEP MAPLMARFVAQAVQDWIKAVVAKTAYIEPGSP" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1547312..1547440) /locus_tag="Silicibacter_1438" /translation="MSRISAMQKKSMQTRFRVVVVVFPPFFDQDLGFSQALEDFAI" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1547672..1549897) /locus_tag="Silicibacter_1439" /function="COG: Signal transduction histidine kinase" /translation="MNCLANLDVNLASGAAASLWVVCSIVLIRIARNIPFSGQLSFVL TLAAMLWWLFTVIFDLASQSEACKVAWSLAAWPGIVLVPVAWSFFVFDYTMNSCRTRR PFRLLIYIGLPSLVSAIAVTNHWTHLLYGPDTRLVIEGGDSFVIFDHGPLFFAVAATL YVFLMIALGLLGFAFLKAKKIFRPFMGALIIITAAPVVANLAYIGWGVTVFGFDPTPF TFAVSLIALSWLLVNNSMMDTAAQGRTLMFYATQDPVILVDAGGQFVSANPAARQLIG DRIPDYGEPIEQLPEVGPLVKDLVKAGGLGKPGPIRLAGRAFDPRAVPIDSPIQAQIP LLGWCISLVDITERERAAEALREALSLAEAANRAKTQFLANVSHEIRTPLNGVLGMAS VLGETKLDEEQQEFLQVIEDSGQVLLTTIGDVLDLSKVEAGKMTLETKPFTLRNALEG ARALFSARAKEKGIGLHLEMHDDLPRVILGDDHRFRQVVHNLVSNAIKFTETGAVTIS AAPAENGSILLVRVSDTGPGIPAEARDMIFQPFQQVEGGDARKFGGTGLGLSISRQLC HLMGGSLQVADDEPQGATFEIRLPLLPANEAQELLSQPASGAVSVPHGPALDVLVVDD NRTNRLILEKFLSSTPYRVKSVSNGQEAIGLVHSFSFDVILMDIQMPRMDGVETTQKI RSIEQAKGREPSFIVAVTGNAMPEQLSHYLSVGMDDVLAKPVSKTLLLSLIREIRREV A" /product="Autoinducer 2 sensor kinase/phosphatase luxQ" /transl_table=11 /EC_number="3.1.3.-" /note=", Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.3.-) (EC 3.1.3.-)., Histidine kinase, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase" /note="High confidence in function and specificity" CDS complement(1550174..1550947) /locus_tag="Silicibacter_1440" /translation="MIRRLLHLFICLLVVVFLLGPRTPASAETPVGFNIDHRVIVAID APAAGVQHLLPKGWVSMPFPAGPVTGANILFVFADSKLQLDGEGQPLSPATRHAIVLV GMARKVEGDEVRLFVLRIYSTTPEVDPYGVSVAAEMSRQTQLIGAENGARTSIYTWKM HVAEAQSLDFRLGYTVGTPMWGPDEVFPHSATTPEFSRIYRIEQMVDLVKSVPLEMDR VSEMTLTSSVPALAGILDGSEEIVAVMDVPVYLRHIWLP" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1551087..1551758 /locus_tag="Silicibacter_1441" /translation="MDGFDADQRPHKVYLITLTLSRARFAQRALGTQNYQSGFLNEEI SPTTVSEPRPSHVRQTGCATAPEAHRLTGFNAAHRYCMQKKWNSHMKHILLAVLASIF LVFAPGKIMADSAEIEITAGYRERIALPPDAILEVELLDVSRADAPSIRLSSQRFKMD RVPLSVTLHYDADIIDARMSYTISARILSGDTVLFRTTSAYPVLTRDFPAQAELVLHK MPRTP" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2951 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1551914..1552831) /locus_tag="Silicibacter_1442" /translation="MSKLRRIISRLQPMGRATLAGCAWMSLAVLIWASWLVLTSSGRT TALSVVDLAAFRAVIPAVLLAPLLWRSRDQIVQLGVKRGLILSAYGAPFTLLVGHGLG YAPVTHAGAMVPGLMPVFAAVLAYVFLGQRLRKRTALALMLVLAGATTILIGAGRPLP AQGMGTGHLLFLLGALCWACFTVTLRAYEIPAVLATAIVGAVSAVWLLPLWIALDLSN IGAAHWVDIAFQAVFQGTISGLISMYAFSRALRLIGGRASVLSALTPGVATLLAIPVL GQVPQPSDLLALVLVVAGLVIWNLGPKTT" /product="Hypothetical transport protein yyaM." /transl_table=11 /note=", Protein of unknown function DUF6" /note="Conserved hypothetical protein" CDS complement(1552904..1553125) /locus_tag="Silicibacter_1443" /translation="MPYVNIKVTQEGGPNGTGPSTEEKQKLVAGVTDLLASVLGKNPA TTFVVIDEVPLENWGLEGRQVSTIRAEQG" /product="4-oxalocrotonate tautomerase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1193 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1553130..1553510) /locus_tag="Silicibacter_1444" /translation="MSNSPDAEVQDLMTRYFEGLYHSDSDVLRTVFHPDLAYVNATEG TYEHMGLEAYMARIDARTPPASRGDAREEVIERITFKGARIGIIEARMTMMGRNYQDL LTIIHSDQGWRVLTKVFSFVERRD" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1192 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1553507..1553623) /locus_tag="Silicibacter_1445" /translation="MTLNSKCLDQGRASADPKARLKDSVVSPPLSDQRGVAG" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1553885..1554775) /locus_tag="Silicibacter_1446" /function="COG: Transcriptional regulator" /translation="MTLDQLIALDAIVASGTFRAAADRLNKAQSAVSHQIKKLEDELG FDLFSRDTYRPRLSPEGEVFYREVTRVLEQVNGLKTVAAGLRSEQEPLVSIVITATMS LDPILTLLGEVGRAFPATHIKLVTEMMGGPLARLMSGEADLIIAGLDDVPIDEVETRP VGTITIRPVASPAFPAADPARVKSRREMQSYTQVVVSGTGGKEYDQSRDLLSGGQRWT VSDFQAKISIIKAGLGWGGIPEHLIRDELKTGALVPLAIEGYPPRHTEIFAIRRRDRP MGKVMSRIWDDLGRGGIQDG" /product="Putative HTH-type transcriptional regulator yahB." /transl_table=11 /note=", LysR, substrate-binding, LysR substrate binding domain" /note="Conserved hypothetical protein" CDS 1554964..1555542 /locus_tag="Silicibacter_1447" /function="COG: Multimeric flavodoxin WrbA" /translation="MVKIAIVYHSGYGHTAVQAKAVYRGANEVAGAEVSLIPVEDYAQ NWEIIDAADAIVFGSPTYFGSASAQFKSFLDETSGRWLEGRWVNKLAAGFTNSAGMSG DKLATLQQINHFAMQHGMIWVGLGLPPGNNTSTGSPEDLNRLGGFMGAMSQADADVGP EVAPAGSDLRTAEYLGRRVAETALRWQAGAAT" /product="Flavoprotein wrbA." /transl_table=11 /note=", Flavodoxin/nitric oxide synthase, flav_wrbA: flavoprotein WrbA" /note="Conserved hypothetical protein" CDS complement(1555988..1561675) /locus_tag="Silicibacter_1448" /function="COG: PPE-repeat proteins" /translation="MIEFLCECVVRDKRCAMTPPVSGYKTGRGPIVKRLSGVFFFIMV SLFVAPQAAQASFTSCPANTSGGDPLTMNLTVDECTLQSGAAVSALSDDLIQIQIAGG SSTNFFIFDPSANDLRDLIFSVNNGSPQGTLDADGGSLSGIDCAAGCTVSGTHGGSPF TFTYTASGGGGSLSSPAEIDDLVSSTGNTVADGGTDTIAAAIDSGTPTTITYDVSNSG SGTLSLSGLTQGTPTNASFGATSIDAASVASGGTETDAISITFTPSSTTDGASFSVPF SFTTNDADDGTDETTFNVTISGTINAEAEISDLTSSTTNTVADGGSDAQGTVASGSAQ ALIYTITNSGTADLSVATASSSSASNVTVNSIGAPGSTTVSAGGGTTQFTVQYTPSAA GAFSFDLSFVNSDADEDPFNFTVSGTATAAPGFSQAIAPGTILADGTATVTFTIDNSA NATAATSLDFSNSLPAGVEVAATPNASTTCTGGTLTAVAGSGTLSYTGGTVGAGASCT VQADVTAGTDGSYSNTSGDLTSSLGNSGSASASLTVASPEIDLQRPAATSLADGDTDA QGNVAVGVQQVLTYTVENTGNATLTLSGTPSSSAASNVSVDSISAPGSSSLAASASTT FTVAYTPTAAGAFSFELDVSSDDADEGTYDLTVSGTATAAPGFSQAIAPGTILADGTA TVTFTIDNSANATAATSLDFSNSLPAGVEVAATPNAATSCTGGTLTAVAGSGTLSYTG GTVGAGASCTVQADVTAGTDGSYSNTSGDLTSSLGNSGSASASLTVASPEIDLQRPAA TSLADGDTDAQGNVAVGVQQVLTYTVENTGNATLTLSGTPSSAAASNVSVDSISAPGS SSLAASASTTFTVAYTPTAAGAFSFELDVSSDDADEGTYDLTVSGTATAAPGFSQAIA PGTILADGTATVTFTIDNSANATAATSLDFSNSLPAGVEVAATPNAATSCTGGTLTAV AGSGTLSYTGGTVGAGASCTVQADVTAGTDGSYSNTSGDLTSSLGNSGSASASLTVAS PEIDLQRPAATSLADGDTDAQGNVAVGVQQVLTYTVENTGTATLTLSGTPSSAAASNV SVDSISAPGSSSLAASASTTFTVAYTPTAAGAFSFELDVSSDDADEGTYDLTVSGTAD GSAEIGVGSATGGSLEDGDTDTIPGTPSAGSPTVIIYTFTNSGSGTLNITTPTVAGNI SNETNVVVNSLTLASNTVAGGGGTTTLEISYTPQVSGAYRFDLQVANDDADESLFNIT VAGSASGLPEIEVSSSASGALSDGDTDSIATVATPGVTASVTYTITNSGTDVLTLDAP SVASNIRNQSNVTVDRLSLASTTVASGGGTTTLRVDYTATAGGAYGFDLSLGSDDADE DPFDIVVSGTAQSVASALAAQSGSGQVSEVGAQFPAPLVVLVTDSTGTGVAGVDVTFA APASGASVVFASTGTHTETVTTGSDGTASTSAMTANGTPSSYAGGSTLQSYDVTASAT GLASVTFALTNDRDSEADIQKTQEVIAAFVSNRANAIVSNQPDLVSRLRQGALAGQQG RNGFDLRATSGGRSANFSFSLRALLEEARRRNDGARWRETLRHADASAGPGADSAADR AMASQAYALRFRGTDPAQAAPVVTPVISSGWDFWAEGTYAITESGNFESRSGLFFAGA DYRWSDQVLLGVMGQLDIADEDNVAAGTSASGTGWMVGPYVVVRLDQNLYLDVAATYG RSSNTVNALGLFEDDFDTERFLLQGGLTGDFKLNARTTISPFARLTYYYEKQESYTDT LGRVIPSQDFELGRFEFGPKISWEMYLQEGTQFSPYVSFSGIYDFNKLQGATPTDATL ASSQSDLRGRLEAGATFLVPDRGIKVAVEGFYDGIGTSDFESYGASLSVLIPF" /product="Vegetatible incompatibility protein HET-E-1." /transl_table=11 /note=", Outer membrane autotransporter barrel, Autotransporter beta-domain, autotrans_barl: outer membrane autotransporter barrel domain" /note="Conserved hypothetical protein" CDS 1562220..1562726 /locus_tag="Silicibacter_1449" /translation="MSEPFLAEIRIVGFNFAPRGWAFCDGQILPINQNQSLYSLLGTT YGGDGRTSFALPDLRGRTPLHRGPGHSLGQKSGAETVTLGIGEMPAHTHAAHASSQVG NSRTPASHLLAAEISPDAAYHAPTPGTLVGIRAITNAGGSQAHENMQPYIAVNFCIAL QGLFPSRN" /product="conserved hypothetical protein" /transl_table=11 /note=", Phage Tail Collar, Phage Tail Collar Domain" /note="Hypothetical protein" CDS 1562744..1563262 /locus_tag="Silicibacter_1450" /function="COG: Microcystin-dependent protein" /translation="MSEPFVGEIRMFAGNFAPRGWAFCDGQLLAVSQNDALFSLFGTI YGGDGRTTFGLPDMRGRLPLHAGAGPGLSPRRLGARGGAEKVTLTVNQMPSHTHPLQA STELAQDQDPGGRVLAAGSGINHYTPSSPTSPMASNMVTHTGGSRSHTNLMPFLCVNF IVALFGIYPSRH" /product="microcystin dependent protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0483 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1563272..1563799 /locus_tag="Silicibacter_1451" /translation="MSEPFIAEIRIFAGNFAPRSWAFCDGQLLPVSQNTALFSLIGTT YGGDGRTTTALPNLQGRAPMHPGRGPGLTDRRLGQRGGSENVTLSEAQLPNHTHSGIA SLDTSSTGTPSDTTTLGDTGFDNLYQTATGTNLVDLAPEALPNTGGGAAHQNMQPYLT LNFIIALQGLYPSRS" /product="conserved hypothetical protein" /transl_table=11 /note=", Phage Tail Collar, Phage Tail Collar Domain" /note="Hypothetical protein" CDS 1563869..1565086 /locus_tag="Silicibacter_1452" /translation="MSVEDATHEDFSGNLLTDPSYFRIFFTALTSEGSLGYNDQTIEN GSFSASFTPLTQTTYEPSLLNASVTQGGYVSVLAVDASTGHVTYIRERRDETGSRFAA PQDLGKPDNVANLGETLLLNGLNGRPNVFLISADPTGEIWWKYENPNTVVEETITVVP PGTDTPIEVTVLVEVPPAQPWSDWQQLPGALSSLTATQNADGRILLAGINSDGIPYMN LQSSDRPFLPEGWDGWEEISDGLTGFEQLVCGLDMNALVHIFARIGDKIYMKAQQQVS ASSFGAWVLFGTFPSSVHSMALSSACNDGLYLVAQLSTGTNCPLYAKYQTGPTSENWS TWDVIGHVAQDCDLVLQPNANAMLSLFSCDPNGDAAYLNQQTLDHWAAVWTALGSGYA TIATTQDITPNPE" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1565083..1565664 /locus_tag="Silicibacter_1453" /translation="MTLPEAPPTSFEIRPPSGAEAPLARRAATLGARYRWITPKDQAF LVALYRSTREVELDRTPWQETEKQAFITMQFMAQHAHYQAHYPDALWLVIEQYNKAVG RLYLERWEREHRIIDIALLPQTRGQGLGSAILGDLLEEATRAQKSVSIHVEKANPAQT LYRRLGFITKEDKGVYDLMRWDLPADQVNTASY" /product="acetyltransferase" /transl_table=11 /note=", GCN5-related N-acetyltransferase" /note="Hypothetical protein" CDS complement(1565640..1565933) /locus_tag="Silicibacter_1454" /translation="MSTLRTLTSADFEALLNRTFAVRSEPEDVYLSLIEVKVMGSGER EGGAFSTLWQGPKSPFLEQAIYSLSEEEFGEQEVFLVPVAEKDAGIQYEAVFT" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1566235..1567128) /locus_tag="Silicibacter_1455" /translation="MPDYAKIFTYEVEGLSYTVSLYEEDGKILADITLTEGSMDVNAL YYGDDEFSGTSENLSGPLNLNGTSLEGEKIQWDDAVALSDPGLGAEGDEKETYLHEGD TLTVELGAESLDEVDIFGIRATSTTTEDGSIKAVSDDPEEPVDPVEPTYEKVFFGWEF SETGEPLSGTWILDQEPDPNPYGVTALPEGTEPTFENYLSYYASDTVWGDVDLLEGVA FYETDENGTLQEVFRFDAPEAGFQSTEEVLDAYYAALDAYEAESGTDGADLLAALSID MDPEAEATAEEFSEADDYEFV" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(1567365..1568336) /locus_tag="Silicibacter_1456" /function="COG: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain" /translation="MPPKSPPIFEFLLFEGFSNMVLASAMEPLRDVRMNSGQEVSGWR VTTLDGAPVRSSSGLQITPDGSFDEGETNRTLVLVAGYHVRDQVTPTLLAKLRTATRQ AERVLALDTAAWLLAAAGVLEGQAATIHWQELEAFSETFPKTEVSTARFVRSGAFLTC GGASTALDMMLSLIQELYGSAAAFGASTMFVYDPSRQSELNRGAARLEQRGSPKVLEA VNLMAERIESPLSTAELAKQVSLSERTLARAFQRELGMTPGKYYKILRLQHARYLSEE THLSLEQIAHRCGFSSASSLGRSFVGLYGRTLRDTRTQERPWVKSAR" /product="transcriptional regulator, AraC family" /transl_table=11 /note="identified by match to putative ortholog SPO1704 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1568381..1570411 /locus_tag="Silicibacter_1457" /function="COG: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases" /translation="MRYAVCKSSRLAQSEPLAGTRSLDPDAPMTTAPPLWQPDLSACR KPLLSDFLTLAAKTSDTTIRSFADLHAWSATEPQKFWPLAWDFCRLVGEAGPVPLLPH QDPMQVRFFPEARLNIVETFPKNADTREAIVFIGEDGRRTVWSRADLKREVEMLAAAL RDAGIEAGDHVAGIVPNMPQAVAAMLATASLGAIWSSCAPEGGPDVVVDRLGQIAPKL LFAADGYFYGGKRFETRAAIAEIADRLPSIQQIVVWPYAYDAADLPACMTSYDAFKLQ DAPELDCRPMAFGDPLYVMFSSGTTGKPKCIEHCGGGTLLRMLVEHKLHCDLKPSDRM FYDTTCNWMMWNWQVAALASEAAIVLFDGNPMYPNRERLFDIAEAEDVTHLGVSAKYI DTSLKRQHKPAQSYTLDCLRVVLSTGSPLSPKGFAHVYTDWKADVQLASICGGTDILG CFIGGCPLLPVHQGEIQAPMLGLDVATLNRQGEPVEGEAGELVCRNAHPSMPTRFLND PGNARYRARYFETFPNVWRQGDFTIRTKQGGYVVLGRSDATLNPGGVRIGTAEIYRQL DKIDAIADAVVVGQSVDNDVRVILFVVLAEGVALDDGLSARIKTAIRKNASPRHVPAK ILFVADIPRTKSGKTAELAVRDVVNKHPVRNLSGLANPQALALFTDHPELQA" /product="acetoacetyl-CoA synthase" /transl_table=11 /EC_number="6.2.1.16" /note="identified by match to putative ortholog SPO1959 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1570431..1571348 /locus_tag="Silicibacter_1458" /function="COG: Uncharacterized conserved protein" /translation="MPLNMNRDVFITAAVTGSGGTQDKSPHVPRSPKEIAASAIEAAR AGAAVVHCHVRDPETGAPSRRLELYRELTDRIRDSEVDVVLNLTAGMGGDIVFGSTEA PLPVNEAATDMIGATERMAHIAECLPEICTLDCGTMNFAEADYVMTNTPGMLRAMGQM MTDLGVKPEIEAFDTGHLWFAKQLVKEGILEPNALVQLCMGVPWGAPNDLNTFMAMVN NVPSDWTWSAFSLGRDQMPFAAASVLAGGNVRVGLEDNLFLDKGVLATNAQLVERAVS VIEGMGAKIVGPDAVREKLGLTKRAPVAA" /product="conserved hypothetical protein" /transl_table=11 /note=", Prokaryotic protein of unknown function DUF849, Prokaryotic protein of unknown function (DUF849)" /note="Hypothetical protein" CDS 1571404..1572399 /locus_tag="Silicibacter_1459" /function="COG: 3-hydroxyacyl-CoA dehydrogenase" /translation="MKTAAIIGGGVIGGGWAARFLLNGWDVRVFDPDPEAVRKINEVL ANARRSLPSLYDKALPAEGALTFHSVMAEAVAEAAWIQESVPERLDLKHKIHAQIEEH APKSAIIGSSTSGFKPSELNAKGARAVVAHPFNPVYLLPLVELVGDADSCAQASDLLR EVGMYPLTVRKEIDAHIADRLLEAVWREGLWLIKDGICTTEELDESIRMGFGLRWAQM GLFETYRIAGGEAGMKHFMAQFGPALVWPWTKLMDVPEFTEELVDLIAGQSDAQSGHL SIRALERLRDDNLVGMMRALKKSGSGAGGVINTHEATLPVPAPVELPITVSRPVP" /product="3-hydroxyacyl-CoA dehydrogenase" /transl_table=11 /EC_number="1.1.1.35" /note=", [EC:1.1.1.35] , 3-hydroxyacyl-CoA dehydrogenase, NAD-binding, 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain" /note="High confidence in function and specificity" CDS 1572424..1572825 /locus_tag="Silicibacter_1460" /function="COG: Predicted thioesterase" /translation="MNEAHYTEASAQATDRFMELIGADADYIAAGQSYFTVENHVRFL DELHEGDALTVTTQVLQGTGKKMHLFHRLFGPAGKLAATVETLLLHMDLNARATSLPS PEVADKLTSYAAAHAGLPLPEGAGRHVGQRG" /product="hypothetical protein" /transl_table=11 /EC_number="1.1.1.35" /note=", [EC:1.1.1.35]" /note="High confidence in function and specificity" CDS 1573011..1574486 /locus_tag="Silicibacter_1461" /function="COG: Choline-glycine betaine transporter" /translation="MSDNNSKSHLVAKSGFFAGLHPGMGTAAKGMIAFFVIFTVLNVD LASGLYASVRAWIEGWFSWYYISLLIGVMFFCFWLMGSRFGKLRLGEDDSRPEFGKFS WFAMLFSAGIGVGILFFGVAEPIFYFDNSGAFGYPNNPHADMAGHMDMDMLRARDAMR VAFFHWGFHGWALYVLVGLCLAYFGFRKRLPLTMRSTLYPILGERIYGPWGHLVDLLA VFGSVFGIATSLGLGSTQIATGLNVLFGLEVTLTLKIVLIVIVSVIATASTVSGVARG IRFISEWNIWLSIALLLGFLVLGPAKWLMAFFITSVGDYLWHFIPMGYWTATEEPNVA WQGGWTIFYWGWWIAWAPLVGMFIARISYGRTIREFMVGVLCVPTIAVFFWLCIFGGT AIWQEMHMAGGPAAEGGAGIIATVRNWELPGALYGTIANIGETSWMGDMSWTAWPMSL LANLSMFERGAKDLVVFMDDLESVVGSGRKLTANELRKRIQ" /product="High-affinity choline transport protein." /transl_table=11 /note=", BCCT transporter, BCCT family transporter, bcct: choline/carnitine/betaine transport" /note="Conserved hypothetical protein" CDS 1574577..1576850 /locus_tag="Silicibacter_1462" /function="COG: Signal transduction histidine kinase" /gene="stuC" /transl_table=11 /note=", [EC:2.7.3.-], Histidine kinase, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase" /note="High confidence in function and specificity" /product="sensor histidine kinase" /translation="MSPKRLPIKLKVALVIFIVSGAAFSAFFFLNYRDTVSRIHTHTE QLLERDHKTHARYIQDTLTTMRQDAETLIGFPPISGILRTRQSDELTDPLDGSSLQDW LVRLETLFKSVLTNRSGYSQIRLLLPENNWSEIVRVNFVAGEVSHVDPTDLQQKGDEP YIRLLQAVETDDSLFSNVTRNREKGSVVGPPTLRSIKRLVNDDGAVIGAVVINAVLSE LLSVPEYEGELGRTYYVIQNHVEPAFPLATDDQSFVLSPEETPRVLDFKVVAQQSVGQ LIDLGSDENLYLSSVPISDAHVPFDFFIATDIDAGALFQQARHELWRNFAHALVLTLL ASGLGYVFAARLLSPLEHLIDEIKKSAGLRGDQAGSLSKGGDEVTLIANNFKQLTSDL VRETQRLDMVLTNVAEGIVTLLPDGTIEDANPASCRILDEDSVHLTGRNLFEMLGFDE EHGKEILCETISARGDQPPQQREISLKKQAGEPIVINLVMRHTSYAEGSRFVALIRDV TERAAATARSEALIAALRRSNAELDQFAYIASHDLKAPLRVIENAVSWLEEDLRPHLT DDTRESMDLLRNRARRMEALLSDLLKHSRIGRVADSVEKVTGVQLSESILELLDVPEN IRIVFSDDFYHLTVQKMPLETVLVNLIGNSIKHHDRGSGYVSIDVKHSDGFMRFRVED DGPGIEPAYHDRIFDIFRTLRSRDQLESSGMGLAIVKKHIEVVGGKIDVLSDGERGTV FEFSWPDEIVQEEDKAA" /EC_number="2.7.3.-" CDS 1576995..1578152 /locus_tag="Silicibacter_1463" /function="COG: Signal transduction histidine kinase" /gene="aphA" /transl_table=11 /note=", Histidine kinase, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase" /note="High confidence in function and specificity" /product="two-component hybrid sensor and regulator" /translation="MDEKKMLIVDDDAGDRKMMRRHLSKLYPTNSILEAESGETARSF VDEEVEVIFLDYQLPDISGIDLMSSFFRRWPHCVIFIMTGQGDEEIAKSAILSGAADY ISKSAITPGALQRMIANGLQVARMKWRIEEHQKELQQFSDVLVHDLRAPIRAIKFLSD QILEDFAAGDMDEVTREFDLMKKSVSKMSDLIERLASHINPHSEGAPEMIAAESLVES ACLAISQDIANSDAIISTEHNDISVSCFPPDISQLLQNLISNSIKYRSKEQPQIDISV KQLSSGVQFAIQDNGIGVPEEYRKRIFEPFKRLQRSSDLPGSGLGLATCAKIAKRHDG EIWCDPNVSSGTLIRFSLKLPPPMTLPDQEDDEEETVVPAAFRDTQARARH" /EC_number="2.7.3.-" CDS complement(1578438..1578614) /locus_tag="Silicibacter_1464" /translation="MLQAIVWLADMADFAEMNEVWDAWVPEGHAPARACGEAKLARAE LKVEIIVTAAYPVD" /product="Hypothetical UPF0076 protein slr0709." /transl_table=11 /note="Conserved hypothetical protein" CDS complement(1578667..1578762) /locus_tag="Silicibacter_1465" /translation="MRTEITAGQTSDYLGFIDITSIRLWVRHLST" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1578759..1578944) /locus_tag="Silicibacter_1466" /translation="MDALNESGVVPHALQMIDSTVVRAHHQAAGAKGGFRDRVLAVRV AASRPRSISSSMQQGCP" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1579056..1579190) /locus_tag="Silicibacter_1467" /translation="METNLARDLMSDEEWAFFGRFIRTVRAPNGRKPSNHRLVLDGVF " /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" tRNA complement(1579693..1579766) /locus_tag="Silicibacter_38" /gene="Silicibacter_38" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS complement(1579918..1581015) /locus_tag="Silicibacter_1468" /function="COG: ABC-type sugar transport systems, ATPase components" /gene="aglK" /translation="MANLKLTGVEKTYAGAVNVLRDINLDIKQGELIVFVGPSGCGKS TLLRMIAGLERITGGTLEIDGAVMNDIPPAQRGIAMVFQSYALYPHMTVRDNMGFALK IAGKSASEIEEAITRAAKILQLEDYLDRLPKALSGGQRQRVAIGRAIVRDPKVYLFDE PLSNLDAALRVATRIEIAQLKEAMPDSTMIYVTHDQVEAMTLASRIVVLANKGIAQVG TPLELYERPENEFVAQFIGSPAMNLLPGEVIATGDLTRIRLENGEEVASTVPTRTSDM GLKVNVGVRPEDLFEEGEGGAMIDATVDIVEALGEVTVLYFKAQAGQDAPVAKLSGIH KGLRGSQVRLYADPKKVHLFHNGHSLLYREG" /product="Alpha-glucoside transport ATP-binding protein aglK." /transl_table=11 /note=", ABC transporter related, ABC transporter, 3a0106s01: sulfate ABC transporter, ATP-binding protein" /note="Conserved hypothetical protein" CDS complement(1581035..1582687) /locus_tag="Silicibacter_1469" /function="COG: Glycosidases" /gene="aglA" /transl_table=11 /note=", [EC:3.2.1.20] , Oligo-1,6-glucosidase (EC 3.2.1.10) (Oligosaccharide alpha-1,6- glucosidase) (Sucrase-isomaltase) (Isomaltase) (Dextrin 6-alpha-D- glucanohydrolase)., Alpha amylase, catalytic region, Alpha amylase, catalytic domain, trehalose_treC: alpha,alpha-phosphotrehalase" /note="High confidence in function and specificity" /product="alpha-glucosidase" /translation="MNAQTTINPASVLSNDPDWWRGAVIYQIYPRSYQDSNGDGIGDL QGITSRLDHIASLGVDAIWISPFFTSPMKDYGYDVSDYCDVDPMFGNLADFDALVARA HDLGLRVMIDLVLSHSSDQHPWFAESRQSRDNPKADWYVWADPQEDGTPPNNWLSIFG GSAWHWDARREQYYLHNFLVSQPDLNFHCPDVQNALLDVTRFWLERGVDGFRLDTINF YIHDKELRSNPALPKDQRNANIAPSVNPYNHQEHLYSKNQPENLDFLARFRALLDEYP AKTAVGEVGDAQRGLELLGQYTAGNTGVHMCYAFEFLAKDPLTAARVAEVFERTDEVA ADGWACWAFSNHDVQRHVSRWGLSDAALRLHATLIMCLRGSVCIYQGEELGLPEADIS FEDLQDPYGIEFWPEFKGRDGCRTPMVWRSDNTHGGFSEARPWLPVSLEHAALSVAEQ EANPDALLHHYRRVIALRRAHAALSHGTHDKVVASGSVVHFLRSAESEDIFCAFNLGE AAAEVSLPAGTWEQLGADIGTAEINGDLVKLGPWQACLVRRV" /EC_number="3.2.1.20" CDS complement(1582733..1583881) /locus_tag="Silicibacter_1470" /function="COG: ABC-type sugar transport system, permease component" /gene="aglG" /translation="MNAIAGQKPGLMWALRISVIVLVGLWLFPTLGLLVSSFRTGDQI ATSGWWKALFPTEQNQTLRTAAPETQVQVGDLWVIEGNLFEGETSAEISVWGTNAREI DAYSAGETATLRGGEELTVEADGSYRMTSSTEMEGRRGARVFVTAVVPPEFTVENYET ILISGGSTDNMARAFFNTLTVTIPATIIPILVAAFAAYALAWMEFPGRALLIAAIVGL LVVPLQLALIPLLKFHNEIGIGKGYLGVWMAHTGFGLPLAIYLLRNYMVGIPRDIIEN ARVDGATDFQIFTRIILPLSFPALASFAIFQFLWTWNDLLVAMVFLIDATGETTVMTK QIVELLGTRGGNWEILATSAFVSIAVPLAVFFAMQKYLVRGLLAGSVK" /product="Alpha-glucoside transport system permease protein aglG." /transl_table=11 /note=", Binding-protein-dependent transport systems inner membrane component, Binding-protein-dependent transport system inner membrane component" /note="Conserved hypothetical protein" CDS complement(1583895..1584902) /locus_tag="Silicibacter_1471" /function="COG: ABC-type sugar transport systems, permease components" /gene="aglF" /translation="MHPAIQGLLTIAFGVGGCVGYFYLSNIILDTFVFPARGKDIAKN IRRANMVRPWLFLLPALLALGLYLAYPVFETIRLSLTERVPGGGSEFVGLDNYKQMLA EAKFWEALQNNFLWLLVVPAASTAFGLLAAQLTDRLAWGNIAKSLIFMPMAISFVGAA VIWKLVYDARPPGTEQIGILNAIYIWLGGVEPQQWLTIPFWNNFFLMMVLVWIQTGFA MVILSAALRGIPEETVEAAIVDGAGPFQIFFKIKVPQIMGTIVVVWTTITIVVLKVFD IVFALTNGQWETQVLANYMYDKLFRANDWGVGSASAMVIMLLVMPILVWNVYNARREM R" /product="Maltose transport system permease protein malF." /transl_table=11 /note=", Binding-protein-dependent transport systems inner membrane component" /note="Conserved hypothetical protein" CDS complement(1585047..1586396) /locus_tag="Silicibacter_1472" /function="COG: ABC-type sugar transport system, periplasmic component" /gene="aglE" /translation="MKRVLMSAAAITALMAGTASAQDLIFPVGEGAFNWDSYAELEKI DLNGEQVTVFGPWLGPDQEVVENVLAYFAAATGADVRYAGSDSFEQQIVVDAEAGSAP NVAVFPQPGLVSDMAKRGFITPLGEETADWVRDNYAAGQSWVDLGTYPGADGNDGLFG LFYKVDVKSLVWYNPENFEDFGYETPQSMEELKALTEQMVADGNTPWCIGLGSGGATG WPATDWVEDMMLRTQEPAVYDKWVSNELKFDDPAVIGAIEEFGWFAKNDDFVSGGAGA VASTDFRDSPKGLFASPPQCMMHRQASFIPAFFPEGTEMGLDADFFYFPAYEGKELGN PVLGAGTIWSITNDSPGAQALMEFLKAPIAHEVWMAQQGFLTPLKSVNTDLYATDTLK KMGEILLSADTFRFDASDLMPGGVGAGSFWTGMVDYAGGKPAEEVATEIQSSWDALK" /product="Alpha-glucosides-binding periplasmic protein aglE precursor." /transl_table=11 /note=", Bacterial extracellular solute-binding protein, family 1" /note="Conserved hypothetical protein" CDS 1586663..1587703 /locus_tag="Silicibacter_1473" /function="COG: Transcriptional regulators" /gene="thuR" /translation="MNLKELSAVLGLSQTTVSRALNGYPEVSEATRKRVMQAAQDHNY RPNTRAKALATGRAMAIGHVIPLSTQHEMMNPIFSDFIAGAGESYSQAGYDMVLSLVA DEDQSRAYHEMAAKRNVDGIVLHAPKMRDSRITMLQEIGLPFAVHGRATDISRPYSWL DVNNTSAFRRATDFLLDLGHRRICLVNGQESMDFAHRRRQGYEAALQARGIPVDPALM TAGEMTEVYGYDTVQRTQALEDPPTAYLVSSIIAAFGVRRAIEESGLKMGRDISVITH DDDLSYLRNGADVPVFTATRSSVRDAGRRLAKLLISQIEDPGDAPLTELLEAELTVGR STGPAPNRTSKT" /product="HTH-type transcriptional repressor purR" /transl_table=11 /note=", HTH-type transcriptional repressor purR (Purine nucleotide synthesis repressor)., Periplasmic binding protein/LacI transcriptional regulator" /note="High confidence in function and specificity" CDS 1587700..1589034 /locus_tag="Silicibacter_1474" /function="COG: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase" /gene="bgl" /transl_table=11 /note=", [EC:3.2.1.21] , Beta-glucosidase (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D- glucoside glucohydrolase) (Amygdalase)., Glycoside hydrolase, family 1, Glycosyl hydrolase family 1, lacG: 6-phospho-beta-galactosidase" /note="High confidence in function and specificity" /product="beta-glucosidase" /translation="MTDFTFTRRDFPGDFLFGCATSSYQIEGHQYGGAGPTHWDSFAA TPGNVVRSEDGARACDHYHRFEEDLDLAAAAGFECYRFSTSWARVLPEGRGTPNAEGL DFYDRLTDAMLERGLKPCATLYHWELPQPLADMGGWRNRDVSNWFAEFTEVIMSRIGD RMYSVAPINEPWCVGWLSHFLGHHAPGLRDIRATARAMHHVLLSHGRAIEVMRGLGMN NLGAVFNFEWAEPLDQSAQAQAAAETYDAIYNRFFLGGVFKGAYPEAALRGLEPHLPQ GWQDDFATITQKVDWCGLNYYTRKVIGPDNGPWPHYAELVGELPTTQMGWEIYPDGLY KFLKRTAEDYTGGLPLIVTENGMANPDVLLEGEVPDAARIAYVEAHLARVRQAIAEGV PVKGYFLWSLLDNYEWALGYEKRFGLVHVDFETLKRTPKASYRALQRALTAS" /EC_number="3.2.1.21" CDS complement(1589085..1589576) /locus_tag="Silicibacter_1475" /function="COG: Riboflavin synthase beta-chain" /translation="MLKGSRAMTKSPKFAFIKAQWHADIVDQALIGFQDQLADFGLDA AVDVFDVPGAFEMPLLAQKLAATGEYDAIAAAALVVDGGIYRHDFVAQAVVSGLMEAG LKTGVPVLSVSLTPHHFQPSEEHQTFYHAHFVKKGREAAQAAVRMANLYRDLTPTPVE AVA" /product="6,7-dimethyl-8-ribityllumazine synthase" /transl_table=11 /EC_number="2.5.1.9" /note=", 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) (Riboflavin synthase beta chain)., 6,7-dimethyl-8-ribityllumazine synthase, 6,7-dimethyl-8-ribityllumazine synthase, lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase" /note="High confidence in function and specificity" CDS 1589928..1591016 /locus_tag="Silicibacter_1476" /function="COG: Transcriptional regulators" /translation="MTDRTRITIKDVALAAGCGVATASRVLNKSGPASAETRARVEDA ARRMGFVFSATGRALQSRKSMTVGCLIPSLANPVFAEAVQGAQEELRSHGYQLLVASS NYDDETDNDILTTLLSKDVDGLLVTMAAPQESVPLAQARARDIPVCLMFHDPLPDWPS AHVSNAQAAAEVARQFALYGHERTGFLALRFSTSDRSRNRFDGFRAQCAALNLAPPKL IEITETEANTPSILAQRLSDHPDLTAIFASNDFLAIAVQKAAPLMGRHVPQDLSVVGF DGIEVGRLLDRSLATIETTPEAMGRQAAQTLLTGLQGGAMTELAPLPFTFRAGATLSG PRAKSPDDDRGAAQSPSVPPFTSNDKQG" /product="transcriptional regulator, LacI family" /transl_table=11 /note="identified by match to putative ortholog SPO0590 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1591021..1592040 /locus_tag="Silicibacter_1477" /function="COG: ABC-type Fe3+ transport system, periplasmic component" /translation="MKHIALTVLAATALAAPLTASFASSAQAEDAICYNCPPQWADWA SMLEAIETEIGVSLPHDNKNSGQTFAQLVAEKDSPVADVAYYGVTTGIKAGKEGLVEA YKPAGFDEIPEGLKDPEGKWFAVHYGTIGFFVNVDALGGAPVPQCFADLKKPAYQGMV GYLDPSSAFVGYAGAVAVNLSFGGDLQDFDPAIEYFSELAENAPIVPKQTSYARVVSG EIPILFDYDFNAYRAKYEEDGNFEFVLPCEGSVRVPYVMSLVGNAPHGETGKKVLDFI LSDKGQAIWTNAYLQPARPVELPAEVAEKFLPASDYARAQAVNYAEMEKAQAGFGERY LNEVK" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1592098..1592901 /locus_tag="Silicibacter_1478" /function="COG: ABC-type spermidine/putrescine transport system, permease component I" /gene="cysW" /translation="MTARSFGVLCLLPLLIFTLAFLALPLVRLVLSSSEGAEGWSVYV RMLQTPRYLSALLQTLLVSGAVTLAALAVSTTAGLFLTRNRFWGRSALLSILTLPLAF PGVVVGFMIILLGGRQGLVNQITPSHVVIAYSTFGLFLGYLYFSIPRVLLTVMAAAEK IDPALEEAARSLGAPAHRVLWDVLLPALRPAMVAAGAIAFATAMGAFGTAFTLATDID VLPMVIYTEFTLSANFAMASALSIALGIVTWGVLLIARSFSGGAIAAGG" /product="Sulfate transport system permease protein cysW." /transl_table=11 /note=", Binding-protein-dependent transport systems inner membrane component, Binding-protein-dependent transport system inner membrane component, 3a0106s02: sulfate ABC transporter, permease protein" /note="Conserved hypothetical protein" CDS 1592905..1593693 /locus_tag="Silicibacter_1479" /function="COG: ABC-type spermidine/putrescine transport system, permease component II" /translation="MRRLPHLLSLMVTLLACAFLLVPTVQSVLAGLTANYFRGLSSGL TLKWVAEVWTLYADSIFLSIWLAVACLVMTLILGVPAAYALARNPGRLSRILEEFISL PLAVPGLALALALLQLYGAQQGFRAHWSFILVGHVLYTLPFMVRAVQAVLAAIDLKTL EEGAASLGAGPARRFVDIVVPNALPGILAGSLTVVTLSIGEFNLTWMLHTPLLKTLPV GLADSYASMRLEIASAYTLVFFVMIVPLLMAMQWASARAQRILS" /product="Probable sulfate transport system permease protein cysT." /transl_table=11 /note=", Binding-protein-dependent transport systems inner membrane component, Binding-protein-dependent transport system inner membrane component, modB_ABC: molybdate ABC transporter, permease protein" /note="Conserved hypothetical protein" CDS 1593690..1594718 /locus_tag="Silicibacter_1480" /function="COG: ABC-type sugar transport systems, ATPase components" /translation="MTLTLCRVAKTYDDGTRALNPTDLEIDPGEIISLLGPSGCGKTT LLRLIAGLEVPDTGAEIRFGDKDVTHLPVEKRNIGMVFQSYALFPNMSVRDNIGYGLK MQRLPRAEIQRRVDEVITLCRLEPYAHRAITALSGGQRQRVALARAFAPRPRLMLLDE PLSALDAALRLELRDELAALLRQFGTTVIFVTHDQDEALAIADRVAVMEGGHIRQIGT PEELYRNPKSAFVAEFVGHAMPLRGEISDRTLRLPGGALPLPLPDNAANGAVYVRAED LRVDPKGPLRAQVETVTFLGTHYRLGLTGLTDQRLFALHHGTSAPVVGDTLHLSIPPE ALICLPQH" /product="probable ABC transporter, ATP-binding protein" /transl_table=11 /EC_number="3.6.3.30" /note=", ABC transporter related, ABC transporter, potA: polyamine ABC transporter, ATP-binding protein" /note="High confidence in function and specificity" CDS 1594728..1595540 /locus_tag="Silicibacter_1481" /function="COG: Predicted phosphohydrolases" /translation="MTSFIQLTDTHIVSEGSLAYGRSDTATALARAVDTINSRLPVLD PVDCVVVTGDLTDHGSAEEYAHLRQLLAPLNVPVRAIPGNHDTREAMRAAFATEDWMP ASGPIQWHHDFGPFAMVGLDTLVEGAPYGMVCEAGLGFLARSLKTTPDKPLVVATHHP WIPSGMADMDRNNLRNGPAMLDLLREHDAPVHVISGHLHRAMSALVDGVLHQVAPAPC HAVHLDQRADAVNSLVLEPGQVTVYNWHDVTGGLVSDLLPIGDYPGPWPFYD" /product="Ser/Thr protein phosphatase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1176 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1595584..1596867) /locus_tag="Silicibacter_1482" /function="COG: TRAP-type C4-dicarboxylate transport system, large permease component" /gene="dctM" /translation="MAEILFPALFVLLALGLPVAFAMMIAVFLALSLGSSYPHLVVVK EMFSGLDSFPLLAVPFFILAAEIMTGGAVTMALLRLAQSFVGHLRGGLGHANVVSSAM FAGISGSALADAAGPGSMMIRMMEKGGYDRSYAGALTIASAVVGPIIPPSITMIIYAM QDQNVSVGSLFMAGVLPGVLITCMVLVANAYVSRKRGYMSGDVMPTLLEIGRIFVYAL PALSLIVLIVGGIRFGAFTPTEASVIAVFYALIVGMFVYRSLRIRDLPNISLKAAMTS GAVLLILGAARAFAWVLIIEGIPQQLAETIISWELSPVAFLLAVNLLLLAFGLFMDPL PGVMILVPILAPISFALGIDPNHFAIIVIVNLTMGLTTPPVGSLIFVVSSTVHLKPSA LIRELPPFFLALAAALLLITFVPNLSTWLPEVSGF" /product="Hypothetical protein HI0147." /transl_table=11 /note=", TRAP dicarboxylate transporter, DctM subunit, TRAP C4-dicarboxylate transport (Dct) system permease DctM subunit, dctM: TRAP transporter, DctM subunit" /note="Conserved hypothetical protein" CDS complement(1596860..1597387) /locus_tag="Silicibacter_1483" /function="COG: TRAP-type C4-dicarboxylate transport system, small permease component" /translation="MKKLEHYFVALNGGLLMVLMAAMTSVVGANIALRYFTGHSLPWA DEAARYLMIWMTFSGAGLVLRAGGHVAITNLQDALPSLGQRLLRGAIVLGLLLFFGFM VHVGLQYTQRMQYQVTPALRLPFLYIYAAMPVGFLLLMVHLLLVAHPFITAGRFKPTG KPSDAPTALPGGANG" /product="Hypothetical protein HI0147." /transl_table=11 /note=", Tripartite ATP-independent periplasmic transporter, DctQ component, Tripartite ATP-independent periplasmic transporters, DctQ component" /note="Conserved hypothetical protein" CDS complement(1597444..1598424) /locus_tag="Silicibacter_1484" /function="COG: TRAP-type C4-dicarboxylate transport system, periplasmic component" /translation="MTVFSRSLLAAGASFAFAVPLAAQTEIKIGYALAEDSHYGVAAK TFEEVVLEQTGEDFSFTHFPSSGLGGERDVIEGLQLGTVEVTIVSSGTLANFVPETGV FDIPFLFRDLGHARSVLDGPIGQDILEKFDAVGLHALAWGEQGFRHITNNRNAINTPA DVQGLKLRTMENPVHLAAFNAMGAAPTPMAWPEVISSMQQGVIDGQENPLSVIVSVKL DEVQKYLTLSGHVYSPAMLLVSKPFWEGLNDEQKAAFEAAAAEAVGAMRGYVDGIEAS GVETLKERGMEVNALSADEKAAFQASIQSAYEGYYKTYGEDLVKSIVAAE" /product="TRAP dicarboxylate transporter, DctP subunit" /transl_table=11 /note="identified by match to putative ortholog SPOA0249 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1598541..1599419) /locus_tag="Silicibacter_1485" /function="COG: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases" /translation="MHVGIIGVGLMGHGIARNVLSRGGFALSFLDHPGNQPVDEIVSL GAVACATPAEVAAMSDVVILCVTGSPQVEAIVAGDQGVATALRQNAVIVDCSTALPES TLRMAEIVRAAGGDYLDAPMTRTARHAHEGTLNLLVGGATDTLERVRPVLSTFTEDVA HVGPLSHGHRLKLLHNYVSVGFMTLLAEAAAQSADAGVDPAVFVDVLASGGGASVALE RLAPFITEGDREGLPFFVSNAQKDIDYYRAMSEQAGAKQTVADGVSQALADAVADGHG QAYVPELCALFKNSSS" /product="6-phosphogluconate dehydrogenase domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO2428 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1599507..1600994) /locus_tag="Silicibacter_1486" /function="COG: NAD-dependent aldehyde dehydrogenases" /gene="feaB" /transl_table=11 /note="identified by match to putative ortholog SPOA0112 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="phenylacetaldehyde dehydrogenase" /translation="MTDWKAAASALYDGGFRPMFINGKWCESQSGEVIEARNPASGAL LATVPKGGAADVDAAVAAARAAFEGPWSKWTPFERQALLLRIADRFEAEWETLCLSDT LDMGMPIQRTLANSRRVLGMLRFYAGQAVTIHGHTIPNSFPGEIHSSTVREPVGVVGA IIPWNAPIAGSIWKIAPAIATGCTVVLKPSEEASLTVLMIARIMQEAGLPDGVLNIVT GYGAAAGAALAAHSGVDKIVFTGSTATGQAIARAATGNLKRVSLELGGKSPVIVCRDA DIEKAVPVAAMAVFANSGQICIAGSRLFVAREIHDEFVRRVAEFAANLRIGHGIEEST DVGPIISARQAERIAGYLAAGPSEGAEILTGGARVKGAGFEGGHFIEPTVFGGVTDEM SIAREEIFGPVISALPFDSLDEVVERANATPYGLAAGVFSTHLGTAHKLAHRLKAGSV WVNMYHAIDPAVPFGGVKMSGYGREGGTEHMEEYLDTKAIWINTD" /EC_number="1.2.1.39" CDS 1601264..1601887 /locus_tag="Silicibacter_1487" /translation="MASKILILSTRENGSGRISLTHKAEGASGISRISADLSRDDLLQ LVLFCEGCDLRRIYGSPAPAELTLDGLSVAYDPRQDELLLSRQVGFSEKSARVGYAAF LAEMAGVVETVIDQAETSKHGLTLKTLLKDTELPDAAVTHLTTDQIAEVRHRLHEMAL LMLYDRAMEKGSRFAKLLRTKKFRPEAQACADDLVAALAQSLLARGD" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1602949..1603872 /locus_tag="Silicibacter_1489" /function="COG: Transcriptional regulators" /translation="MCQDSLGKCAHLVQRQLRCGIFSLSHPHPLDLHDGYRIHHASRH DYPRRVRTWGFQLERIGKFRNVSKIPTNREKCILMAGKRAVSRNTLPDVIANDLRERI LSGELAEGEIIRQESLADEYDVSRMPIREALKRLDAEGLVQFTNNRGASVTKHSLPEI AEIFDLRILIEVDLFRRAIPAMTSTDFALCNQLLEEMDASYDANDVGKWGTLNHQYHS ALYAAADRKLTNDVLQGISLHSDRFVRMHLSVMEQREPAKKEHRDLLRYAEARDVEKA CAALRDHITRTKDALLRLVAENRALAGDQAN" /product="Putative HTH-type transcriptional regulator ydfH." /transl_table=11 /note=", GntR, C-terminal, Bacterial regulatory proteins, gntR family" /note="Conserved hypothetical protein" CDS complement(1601980..1603026) /locus_tag="Silicibacter_1488" /function="COG: Malate/L-lactate dehydrogenases" /gene="mdh" /transl_table=11 /note=", [EC:1.1.1.37] , Malate/L-lactate dehydrogenase, Malate/L-lactate dehydrogenase" /note="High confidence in function and specificity" /product="probable L-malate dehydrogenase" /translation="MTQTEDATTQLTLDEVRALAERVLTHCGYASAHVAAISEMLYRC QLDDCQSHGLFRLFMCANTMKDGKIDAAASPQIHSEDTAIIRADAREGMSLLAVQEAM PTLIEKARRYGMAALAVNNCFHFSALWPEVEALSTAGLAGLSMVPSHSWVAPAGGTKG TLGTNPIAFSWPRKGQDPFTFDFATSGFARGEIELYKRAGKPLPEGVAIDERGQPTCD PDAALNGAMLTFGGHKGSALSIMIELMAGPLIDDLISLESEAAAGRPGCAPYHGQIIL AFDPEKFSGGRVAQNDARAERLFADIIAQGARLPSQRRYAARARNLERGYLEIPSALY RDLEALMESPIGSS" /EC_number="1.1.1.37" CDS 1603763..1605508 /locus_tag="Silicibacter_1490" /function="COG: NAD-dependent aldehyde dehydrogenases" /translation="MSKKPAPRCAITSRAPRMPCCVLLPKTALWQAIKPTDRTLLSTR DRAATGNGLHHPKYVYIILHQILPSQTRGKTMFHPHGNHLIAGQWVTGSDHFASSPAH GESYAFSVGRVSDVDAAVEAAEEAFAAYSATSRAERAAFLNAIADEIEARADDITAIG TQETGLPEARLQGERGRTTGQLRLFADHILAGDYLDRRHDEALPDRAPLPRPDLRMVQ RPIGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIIAEAVLAAI LRCKMPSGVFSLIQGGNRQVGAALVQHPLIKAVGFTGSLRGGRALFDLCAQRPEPIPF FGELGSVNPMFIFDAALNARGEALAEGWAGSLTMGAGQFCTNPGIAVLRAGADADRFV DAAAAALAQTAAQTMLTDGIAHAYRDGQRRMAGVEGVREVLATESDARNATPFLYMTD AQNWLQNESLSEEVFGPLGLVVTVADMDEMRAVARSLQGQLTCTLHLDDGDSDTAATF VPILERKAGRVLANGFPTGVEVADTMVHGGPYPASTNFGATSVGTLSIRRFLRPVCYQ NIPEALLPADLRDAG" /product="aldehyde dehydrogenase family protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0260 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1606213..1606830 /locus_tag="Silicibacter_1491" /gene="yebS" /translation="MNLDQIIACPMCDALHLDQEVQKQSVAQCARCGTVLAAPKSGAM TRIAMLSITALILLMAAASFPFLSLRVQGFSHQASVLDTILAFATGPMLPLSLATGFL ILLVPAARYCALIYTLAPMAIGYRPAPHAATVYIWAERLRPWAMAEIFIIGVAVALVK VSGLARVELGPAFWAFAALLVVTILTDSSICRLTVWKTLKTRSTI" /product="Hypothetical protein yebS." /transl_table=11 /note=", Paraquat-inducible protein A, Paraquat-inducible protein A" /note="Conserved hypothetical protein" CDS 1606797..1607432 /locus_tag="Silicibacter_1492" /function="COG: Uncharacterized paraquat-inducible protein A" /gene="pqiA" /translation="MEDSQNTQHYLTATEAGLSGCRTCGSVAPSGSQVCPHCRSRLEL SETASLQRVWAWLTAGLIAYVPANIYPMLRTKTFGQTSENTLMGGIIELFHHGSYGVA FIVFFASILIPIAKFLAIGFLAISVRKPVTLDHHRRLVLFEVVEFIGRWSMIDVFVVA ILTALVQLDYAAAISPGIAAVSFALSVAFTMLAAQSFDPRLMWLADNEKTS" /product="Paraquat-inducible protein A." /transl_table=11 /note=", Paraquat-inducible protein A, Paraquat-inducible protein A" /note="Conserved hypothetical protein" CDS 1607429..1609513 /locus_tag="Silicibacter_1493" /function="COG: Paraquat-inducible protein B" /translation="MNPKEPAQLKISDQRPSMWRNLSLVWLVPLLALIVSLGIAWKSY SERGELIHIAFDNGSGVVANETTLRYRDVVIGRVEQVGFSEDLSRVSVAVRVDTDIAP FLDEDATFWVVRPEVSSRGISGLSTVLSGVYIEGAWDETAGSAQTEFVGRDRPPLVQP GRAGRRITLRTEDGRMITEGAPVLFRGIEVGRLEHPRLTVSGNSIVVDAFIEAPHDRR INSATRFWDTSGFTVSFGAEGLSLDVDSLASLVSGGIEFDSVFDGGSPANPGAVFDIY PDEATARRTAFARSMAGGVAISVAFDDSVAGLSSGAPVELGGIKVGEVGSLTAAIQNE TDTADVKLVAKLLLQPGLLGLAPGANEEDVLDFLETAVEGGMRARLASAGLLSSELMV ELVRLDDVPPARFDRTAEPFPEMPSAPSDLPDFSATAEGAMERISQLPVEELMAQAIN TLASIEALAAAESTRQAPAAAVALLEETRALLNDPSTRALPGELRATVSDLRAILQEL QQGRAVANLTAALQDGARAADEIATASENLPALVDDLRDLAAKANNLEAEELIQSVNT LMTSADALIGTEAARALPSSLSAALEEIRTTLATLREGGLVDNANATMVSARDATQSV AQAAEGLPALSARLERLMTRSESLVAAYGDRSNFNMETLDMLREIKSAARAVSQLARK IERDPNSLVFGR" /product="paraquat-inducible protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1249 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1609383..1610072 /locus_tag="Silicibacter_1494" /translation="MGIAPISIWKRSICSAKSNPQRARSRSLPARSNGIRTHWYLVDD MKKLVLSLCVAGALSACSSANDPRYLIAATPAERVKNLSARTVEVQLVSLPSYASASD IVSEGDGGALYSQERAQWADDPARGMSVAIARGLSDRTGAAVAVEPWPLNTPADARLD VRIDQSYARADGLFELSGQYAVSSPDGRVREFVKRFHIETPVTESGPAAAARALSAAL AELSRQVAVSM" /product="lipoprotein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1250 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1610101..1610826) /locus_tag="Silicibacter_1495" /function="COG: ABC-type sugar transport systems, ATPase components" /gene="cysA" /transl_table=11 /note=", [EC:3.6.3.25] , Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase)., ABC transporter related, ABC transporter, 3a0106s01: sulfate ABC transporter, ATP-binding protein" /note="High confidence in function and specificity" /product="sulphate transport ATP-binding protein CysA" /translation="MTFEASNIHKSFNGTEVLKGVSLAMKKGEFIALLGASGSGKTTL LNIIAGLQQADRGQLHLDGRDITGLAAGKRRFGMVFQNYALFRHMTVADNIAFGLRVL PRRARPGRAARDAKVSELLEMIGLQDLGDRFPQQLSGGQRQRVAMARALAINPQLLLM DEPFSALDAQVRRSLRSSVRTLQQKVGVGAIMVTHDQAEAWDLADRVAVMDQGQIVQF DTPDALRDRPATGAVRELLQGAA" /EC_number="3.6.3.25" CDS complement(1610823..1611626) /locus_tag="Silicibacter_1496" /function="COG: ABC-type sulfate transport system, permease component" /translation="MTRFILIALSFLFVTVVIAVPVAAVFHRAFSEGWGTYIANILDQ ETLLAIRLTVVTALIVLPLNVMFGVAAAWLIARYRFFGRRALLILIEAPFAISPIVAG LCFLLVYGAYGPVGGVLAPQGIQLMFNLTGIVLVSLFVTCPFVVRELIPVLMVSGEDE EKAAITLGANGWHLFRFVVLPNISWALVYGVVLTAARAMGEFGAVSVVAGSIRGETMT LPLQIELLYNDYNATGAFAAATVLTALALLTLVLRGLLNRFGPEKGHAR" /product="Sulfate transport system permease protein cysW." /transl_table=11 /note=", Sulfate ABC transporter, permease protein CysW, Binding-protein-dependent transport system inner membrane component, permease_CysW: sulfate ABC transporter, permease protein CysW" /note="Conserved hypothetical protein" CDS complement(1611630..1612520) /locus_tag="Silicibacter_1497" /function="COG: ABC-type sulfate transport system, permease component" /gene="cysU" /translation="MFGPEGAGRNPYRSITVVSLTRTAPRVLPGFSLSLGVTLLFVTL IILLPLSGLMWQLAQLSPADYIKVMTSRRVLVALKVTLSAAALATLINAVFGLLLAWV LVRYRFWGRGVLDALVDIPFALPTAVAGIALVALYDKSGWIGGMLAEFDIKIAYTWWG IVIAMVFTSVPFAVRAIQPAIEELDPDEEAAALTLGASGLQRFVRVILRPLLPAILTG VALSFVRSLGEFGAVIFIAGNLPFKTEIASLLILIRLDEFDYPAAAAIAGSLLGLSLL LLIVVNLVQTRLYRYLRTEG" /product="Probable sulfate transport system permease protein cysT." /transl_table=11 /note=", Sulphate transport system permease protein 2, Binding-protein-dependent transport system inner membrane component, permease_CysT: sulfate ABC transporter, permease protein CysT" /note="Conserved hypothetical protein" CDS complement(1612539..1613576) /locus_tag="Silicibacter_1498" /function="COG: ABC-type sulfate transport system, periplasmic component" /gene="cysP" /translation="MPLSSKPFLRSSRVLVRSLGAAAIALAGFASSAEAEEQEILNVS YDIARELYAALNPVFAENWQAETGETLTIKQSHAGSSKQARAILQGLQADLVTFNQVL DVQILADKGFVAQDWQQKLPNNASPYYSLPAFLVRGGNPKGIEDWDDLTRDDVELVFP NPKTSGNARYTYLAAYAYALDKFGGDEAAAQEFVGKILSNVVVFDTGGRGATTSFVER ELGDVLITFEAEVENIRASEDEGAFDRVVPAISLLAEFPVALVDKVADARGSRAVGEA YLDFLYSKDAQEVIAGFNNRVHHPEVVAATADKFPDVRLITVEEVFGSWAEAQETHFG EGGTLDRVFTN" /product="Sulfate-binding protein precursor" /transl_table=11 /note=", Sulfate-binding protein precursor (Sulfate starvation-induced protein 2) (SSI2)., Thiosulphate-binding protein, 3a0106s03: sulfate ABC transporter, sulfate-binding protein" /note="High confidence in function and specificity" CDS complement(1613743..1613901) /locus_tag="Silicibacter_1499" /translation="MFHWRQSGRLPCSFVGAVAQVSRGFCAGIVQALTDDLHLNPVLM SSRLISSG" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1613919..1615445 /locus_tag="Silicibacter_1500" /translation="MAQDLILHGVPDRIRLDGWWLETTETPEPDIAPPMRANGSLMAS LRMRQVIPLLGALVALADWLFWHQPVGLSLAIFAVVVSAAILAVKPERPSLRSWGLAM GFALLCNLPVVIELQFLSLLFSLGGLITLAAWAFAGSSLTTGLILRMALRLPAFGLVH LVKDTADALPPATYSSRLRYMAATLLLPLLMGAVFLGLLANANPVLQAALDSIDLRHL LRAEFWTRFLFWGCVASLLWPLLNLSESWIGAQARRARVTKAGPHRSSFLINPLSVRN SLWLFNLMFGIQTLMDLSILTGGVSLPEGMSYASYAHRGAYPLVATALLAGLFTLLTR NMIGQDKVLRSLVYLWLAQNMILVATAAIRLQHYVEAYALTYLRVAAFIWMALVLTGL LLTIWQIHRGFGTSWLLRRCLAALAITLYLSSLTNFADIVARYNLTHGSALRGPDTYY ICSLGPGAYRTILDHEASTGQDICTRMIERDLERISIRNWREWGYRMWRLEAYDRAQN " /product="hypothetical protein" /transl_table=11 /note="Hypothetical protein" CDS 1615460..1616152 /locus_tag="Silicibacter_1501" /function="COG: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /gene="creB" /translation="MSARILVVDDDPDILEVTRFAIEKAGFETCFASDGLAAIAAQRR DAPDLVVLDIGLPEKDGLEVCRDIRKSSDVPILFLTARDEEIDRIVGLELGADDYLTK PFSPRELVARIKAILKRSTPSITQLPTALTHGALELDAERHQCAFAGVPVSLTGSEFR LLKVLMTRPDLVLTRAQLVEALYGFNIHVSDRTIDSHIRNIRAKMSEVGCTEAVVTVH GVGLRMGACQQT" /product="Phosphate regulon transcriptional regulatory protein phoB." /transl_table=11 /note=", CheY-like, Response regulator receiver domain, PhoB: phosphate regulon transcriptional regulatory protein PhoB" /note="Conserved hypothetical protein" CDS 1616137..1617711 /locus_tag="Silicibacter_1502" /function="COG: Signal transduction histidine kinase" /gene="batS" /transl_table=11 /note=", Histidine kinase, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase" /note="High confidence in function and specificity" /product="two-component hybrid sensor and regulator" /translation="MPADMIRKWRPRLWTVVLLVLAIVLCLPIAGLILFRFYDNQLVQ QTEESVLAQAAVMAATYADLYSEAAGLAPPKPKPVSAQDAIFPSLSINSATVLPPRPD AANPSTSVTATYQRLAPQLSRIASSAQAQTLAGYRFLDTQGNVIAGTAEIGRDLGHVS EVRAALDGHVVSVARTRVRDSSPPALYTLSRGARVRVFVAMPVHVNEALIGAVYVSRT PSHIFRFLYGERFNLLKAAAFVALSTTLIGYVFWRFITRPIRLLKERSQLATQGNHAF EAPDHLGTREIEDLSLSFKSLTERLQNNRDALKTYTAHVTHELKSPLTALKGAAELLR DDDLSQSQRHRLLDTIEKGGTRIEDLLAHMRAFSLADQQAMSGRCSLEQIQDQITQAF PALSIMIENGSLGLPSEATTLSILLTHLLQNAQQHGAKTVKLRTAHTNGSITLRISDD GAGISAGNADKILQPFFTTRRDSGGTGMGLNIVKSTVEALGGHLYILPQDTGAGFELE WPNATPSLDRTQAPGA" /EC_number="2.7.3.-" CDS complement(1617693..1618793) /locus_tag="Silicibacter_1503" /function="COG: NADH:flavin oxidoreductases, Old Yellow Enzyme family" /translation="MTTLFDPIKVGALSLPSRIAMAPMTRSRTDQPGNLPNDMMAAYY AQRASAGLIITEATQISRQGQGYSFTPGIHSDDQVAGWRVVTQAVHEAGGRIVNQLWH VGRMGHGMFHADGLPVAPSAIAPDASVWVVDPKTNRAGMVECPVPRALKTTEIAEVVA DYAAAARNAKVAGFDGVEIHAANGYLIDAFLRSSSNKRQDRYGGSVQNRIRFAIEVVE AVAAEIGADRVGLRISPFITQRGMDDPSAPETILEMAKALARIGIAYIHIAEADWDDA PETPRAFRAALREVFSGSILVAGGYDKERAKVILDAGLADVVAFGRAFVANPDLPHRF AQDLPLSAFDSETLFGGDHQGYTTYGPYAPGA" /product="NADH-dependent flavin oxidoreductase, Oye family" /transl_table=11 /note="identified by match to putative ortholog SPO2615 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1618914..1619813 /locus_tag="Silicibacter_1504" /function="COG: Transcriptional regulator" /gene="lysR" /translation="MLLDNLSLFLRIVEKGGLAAGGRELGLSPATVSERLAALEAHFG ARLLNRTTRSISLTVEGRELVHGAQRLLAETEELESRIRLGTQQIAGPIRVSAPSDLG RNRLAPILDRFLEQNPEVSIDLHLSDGFVDMATMGLDMAIRYGELADSSLIMRRLADN ARIVCAAPSYLEANGTPGDPLDLAHHNCLLMRFGSDVDRAWPFDIDGRRKRVVVRGNR IANDGDLIRQWALEGRGIMRKSQWDVQQDLAEGRLVPLLRNFEVEPIHLQVVMSAGRP QPRRVRALLDTIVAEFQPSRSDS" /product="Putative HTH-type transcriptional regulator ycaN." /transl_table=11 /note=", LysR, substrate-binding, LysR substrate binding domain" /note="Conserved hypothetical protein" CDS complement(1619888..1620784) /locus_tag="Silicibacter_1505" /function="COG: Transcriptional regulator" /translation="MNIELADLRLFVMIAECGNLTHGAARAFLSPPAASARIKAMEQE IGQQLLVRKNKGVELTPSGDALLRHARLVLRQFDFLTDDMTNAQMGHLRIYANTTGVT EFLPAILARFLADHPGVRVDLQERLTQEIIRAVADGTADIGIISGTEGRDGLERLRFA TDRLMLAVPSGHHLAHHDQVSLEQTLAFEHIALHDGSTLLDFLRRQLRRSAFDRQLRI QVRSFEAMCRLIEAGVGIGVVPESAALRHLQTMDITLLALADDWAVRDRSILVRRWAD LPQSAQRLIDLLVEKEAGGAEV" /product="Hydrogen peroxide-inducible genes activator" /transl_table=11 /note=", Hydrogen peroxide-inducible genes activator (Morphology and auto- aggregation control protein)., LysR, substrate-binding, LysR substrate binding domain" /note="High confidence in function and specificity" CDS 1620892..1621734 /locus_tag="Silicibacter_1506" /function="COG: Uncharacterized conserved protein" /translation="MDRLADWIGRTETRTEWIAPFPANALAATLDCSGTEYGEDSELP PLWHWMHFLPIYKLSEAGYDGHAALGGFLPPVPLPRRMWAGSRLQFHAPLRIGHVLTK KSTVQSVIAKKGRSGPLVFITVRHLIFDQDTLGIDEEHDIVYRQEPSPDAPVQKPLPA PETSDFSREITPDPVLLFRYSALTFNGHRIHYDRPFCTVSEGYSGLVVHGPLLATLLL DLLRRERPSATVTGFEFRALSPVFDNDPFSVHGAIGEDAKTYSLWVRRADGALAIKAE ARVI" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1598 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1621887..1622675) /locus_tag="Silicibacter_1507" /function="COG: ABC-type spermidine/putrescine transport systems, ATPase components" /translation="MASEHAPIIEMKNIEKHFGSVIALAGVSLEVFPGECHCLLGDNG AGKSTFIKTMSGVHKPTHGEIYFEGKPMSFGDPRDAISAGIATVHQHLAMIPLMSVSR NFFMGNEPTKKIGPLNFFDHDYANQVTMDEMRKMGINLRGPDQAVGTLSGGERQTVAI ARAVHFGAKVLILDEPTSALGVRQTANVLATIDKVRKQGIAVVFITHNVRHALAVGDR FTVLNRGQTLGTAQRGQITPEELQDLMAGGQELVALEGSLGGTV" /product="Sulfate/thiosulfate import ATP-binding protein cysA" /transl_table=11 /EC_number="3.6.3.25" /note=", Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase)., ABC transporter related, ABC transporter, CP_lyasePhnK: phosphonate C-P lyase system protein PhnK" /note="High confidence in function and specificity" CDS complement(1622677..1623798) /locus_tag="Silicibacter_1508" /function="COG: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components" /translation="MSNASTDTAVDERIKSRSRLREALIRPELGGMVGTVAVFTFFLL FAFDSGMFNSQGMMNWATVSAQFMIIAVGACLLMIAGEFDLSVGSMIGFAGMLIAIFS VTLGWPVWMAIMLTFVLCVAIGALNGFIVIRTGLPSFIVTLAFLFILRGFAIFLPQVI ERKTIIGGIKDAAEGDWLAPIFGGKVLTGLFQWMGEAGLIATFERGTRQGQPVVDGVP MLIIWAIVLILFGHILLTKTKFGNWIFAAGGDAEAARNSGVPVNKVKILMFMFTAFCA TVFAVCQVMEFGSAGADRGLLKEFEAIIAVVIGGALLTGGYGSVLGAALGALIFGVVQ QGLFFAGVESSLFRVFLGVILLGAVILNTYIRRIITGER" /product="Ribose transport system permease protein rbsC." /transl_table=11 /note=", Bacterial inner-membrane translocator, Branched-chain amino acid transport system / permease component" /note="Conserved hypothetical protein" CDS complement(1623872..1624822) /locus_tag="Silicibacter_1509" /function="COG: ABC-type sugar transport system, periplasmic component" /translation="MTSLTKKFALAAVVAAAPLMVATTVSAEGEKYILVSHAPDSDSW WNTIKNGIALAGEQMDVEVEYRNPPTGDLADMARIIEQAAASGPNGIITTLADYDVLS GPIKTAVDSGVDVIIMNTGTPDQARSVGALMYVGQPEYDAGYAAGLRAKGDGVESFLC VNHYIVQPSSQDRCQGFADGLGVELGTQMIDAGQDPAEIKNRVLAYLSANPDTDAVLT LGPTSADPTLLALEENGMAGDIYFGTFDLGGEIVKGIQSGVIQWGIDQQPFLQAYLPV VVMTNYHRYGVLPGNNINSGPGFVTADGLEKIEQFAGEYR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Periplasmic binding protein/LacI transcriptional regulator" /note="Hypothetical protein" CDS 1625009..1626013 /locus_tag="Silicibacter_1510" /function="COG: Transcriptional regulators" /gene="rbsR" /translation="MAVTLKEVAERAGVSRSAVSRTFTDGASVSDKMRRKVEKAAREL GYSPNALASSLTTGRTKLIGLVSNNFHNPIFLEVFDLFTRGLQDRGLRPLLVNLTDET DPEHSVNMLRQYSVDGVVVASSTLPPGFAKAFRDAGVPVVHSFGRSSSAPQVHVVGID NVESGRMAARALIARNYTHVAFMGGPETATSTQDRHAGFMSEMSKHPNIRATYSFAEA YSFQAGRSEMMRLLQAGPAEAYFCGDDVLSIGALSAISDSGLSVPKDIGIIGLNDMEM AGWESIDLTTVHQPIRQIVSSSIELMVAMLDEPDRYPEARIFPCSIVERGTLRPAPKT " /product="HTH-type transcriptional repressor purR" /transl_table=11 /note=", HTH-type transcriptional repressor purR (Purine nucleotide synthesis repressor)., Periplasmic binding protein/LacI transcriptional regulator, ccpA: catabolite control protein A" /note="High confidence in function and specificity" CDS complement(1626010..1627143) /locus_tag="Silicibacter_1511" /function="COG: Predicted dehydrogenases and related proteins" /translation="MTKLKWGMIGGGEGSQIGPAHRLGALADGRFEFAAGALDHRADV GRAYAQSLGIAADRAYGDWSEMLDGERGREDRVDLVTVATPNATHFEITKNFLEAGFN VLCEKPMTMTVEEGEEIVKIAQKSGKICAVNYCYSAYPMVRQARAMVRAGEIGKIRLV VTNFSHGHHGDATDADNPRVRWRYDPEMAGVSGQFADCGIHALHMASFICCDEVERLS ADFASTISSRVLEDDAMVNFRLEGGTVGRLWTSSVAIGRQHGFDIQVFGETGGLRWAS EQPNQLIYTPVGGRTQVIEKGEAGLHEEAQRLSRVAIAHPEGFPLAVANIYCDLADAI SGAARDGLPNAADGVRSMAAVHTAVSSAKAGGEWMDARPPMFR" /product="hypothetical protein" /transl_table=11 /EC_number="1.1.1.-" /note=", Oxidoreductase, N-terminal, Oxidoreductase family, NAD-binding Rossmann fold" /note="High confidence in function and specificity" CDS complement(1627156..1628049) /locus_tag="Silicibacter_1512" /function="COG: Sugar phosphate isomerases/epimerases" /translation="MSIRIGNAPCSWGVEFADDPRNPTWRSVLKDCAEAGYKGIELGP VGFMPEDPVELGEALAEHDLDLIGGVVFRAYHDPAAWEDVVDATHRTARALRAHGAQH LVLIDSISPRRAPTAGRAAEAEQMDKAEWTAYRNRIAESARIGAEEYGLTVGIHAHAA GFMDFEPELERLLSEVDESLLKICFDTGHHSYAGFDPVAFMKRHVGRISYMHFKDIDP KVKAEVIANRTGFYEACGQGIFCNLGLGDVDFPAVRQVLLEAGFAGWCTVEQDCDPTL DPDPVGDALKNREYLETIGFN" /product="Rhizopine catabolism protein mocC." /transl_table=11 /note=", AP endonuclease, family 2, Xylose isomerase-like TIM barrel" /note="Conserved hypothetical protein" CDS complement(1628069..1629172) /locus_tag="Silicibacter_1513" /function="COG: Predicted dehydrogenases and related proteins" /translation="MSEIGIGILGGGYMGKAHAVAMAAVGAVFNTALRPRLEMVCASS PDSAERYRQAYGFARATADWRELVHDPRVEAVVIATPQEVHRQIAEACFALGKPVLCE KPMGASLADSAAMVAAAEASGVANMVGFNYIRTPASQFARALVAAGDIGEITWFRGEH TEDFYANPETPASWRTSGMANGTMGDLAPHMVNAALALIGPIARVMAEVETVHKERPG GQVTNDDHAQMMCRFENGAMGQMYFSRIATGRKMGYAYEITGTKGAIRFDQEDQNALW LYRMEGPEAERGFRKILTGPAHPDYEPFCQGPGHGTGYQDQIIIEARDFLRAIETGEA QWPTFRDGHDVNRVIAAGLAASESKTWKDIKDF" /product="conserved hypothetical protein" /transl_table=11 /EC_number="1.1.1.18" /note=", Oxidoreductase, N-terminal, Oxidoreductase family, NAD-binding Rossmann fold" /note="High confidence in function and specificity" CDS 1629296..1631164 /locus_tag="Silicibacter_1514" /function="COG: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]" /gene="iolD" /transl_table=11 /note=", Acetolactate synthase large subunit (EC 2.2.1.6) (AHAS) (Acetohydroxy- acid synthase large subunit) (ALS)., Pyruvate decarboxylase, Thiamine pyrophosphate enzyme, central domain, acolac_lg: acetolactate synthase, large subunit, biosynthetic type" /note="High confidence in function and specificity" /product="Acetolactate synthase large subunit" /translation="MSAQDDTIRLTTAQAIIRWLCNQYIEIDGEEMRLCGGGFGIFGH GNVTCLGEALNTVRDALPLYRGQNEQSMGFAAAGYAKTWLRQRFMFCTASAGPGTANL VTAAGLAHANRLPMLMLCGDTFLTRLPDPVLQQMENFNDPTFGVNDAFKPVSRFWDRI CHPAQVIQSLPAAIATMLDPADCGPAFIGLPQDVQGWTYDYPTKFFDKKVHRIRRQAP DADEIADAVAALAAAERPILIAGGGVQYSRAAETLREFAETHQIPVVETIAGRANMRA THPLNIGPIGVTGSDSANAIAEKADVIVAVGTRLQDFTTGSWTAFSKDAQFISINAAR HDAGKHMSLPVVGDAKLSLAAIEAATDYNAPLDWVAYAQDQRSKWDRYVVENTAHGNR PNSYAQAIGVVNDLCDPRDRVVAAAGGLPAEVTANWRTLDIGTVDVEFGFSCMGYEIA GAWGARIAQSQMEPDQDVITFCGDGSYMMLNSDIYSSVLSGKKMIVLVLDNGGFAVIN KLQNNTGNQSFNNLLADCPTIAEPFGVDFVAHAASMGAMAEKVANPAELGEAFKRAKA ADKTYVIVMDVDPYEGWTTQGHAWWEVGTPHITEDEAVRTAHLDWESSRSKQRKGI" /EC_number="2.2.1.6" CDS 1632252..1633094 /locus_tag="Silicibacter_1515" /function="COG: Uncharacterized enzyme involved in inositol metabolism" /gene="iolB" /transl_table=11 /note=", 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) (5- keto-4-deoxyuronate isomerase) (DKI isomerase)., Myo-inositol catabolism IolB, Myo-inositol catabolism protein IolB" /note="High confidence in function and specificity" /product="4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase" /translation="MHIAPHDNQNKPIVDAEHDLVPLNYFNIVKLRRGEVFEYAVPGY ETCVVPATGTVDIDVEGAIYPDLGNRTEDVWDGEPEGVYVPVGAKVRITCKTDVTETF IAGAKYDKVLEPFDVRADALDVVQYGSDDTKTHRKIKHILGANHHDKVGRLLVSELYT VGEGGWSGFPSHKHDTDRLPDETRHDETYNFRFKPNYGSGVQMLQREDNQPGDAYHIM DGSTVLIDKGYHPCAVLPGYQMYYFTILGGLSQRSLKQYFQPTHAEQLHTIPGIMDMV AKFK" /EC_number="5.3.1.17" CDS 1633091..1633921 /locus_tag="Silicibacter_1516" /function="COG: Fructose/tagatose bisphosphate aldolase" /translation="MSLATLRDVLQPALKDGYAVAGLVTLGWEDMRAYVAAAEAEHVP IILQAGPSCREHTPLPVLGKMFRHLAEAASIPVVAHLDHGYTAEDCRIALESGFTSVM YDGSRKALQQNIDETAAIAEMAHSAGASCEGEIGFVGYSGGEGSAGTDPEEAARFARE SGVDAMAISVGNVHLQQDKEGGLDELRIRAIEALTDVPLVIHGGSGVPVAQRQALARG SKICKFNIGTELRMAFGQALRAAVNADDARFDRVQILKETHDPVVTATRRVLQAFKGA " /product="Fructose-bisphosphate aldolase (EC 4.1.2.13)." /transl_table=11 /EC_number="4.1.2.13" /note=", Ketose-bisphosphate aldolase, class-II, Fructose-bisphosphate aldolase class-II, cbbA: ketose-bisphosphate aldolases" /note="Conserved hypothetical protein" CDS 1633923..1634912 /locus_tag="Silicibacter_1517" /function="COG: Predicted dehydrogenases and related proteins" /gene="idhA" /transl_table=11 /note=", [EC:1.1.1.18] , Oxidoreductase, N-terminal, Oxidoreductase family, NAD-binding Rossmann fold" /note="High confidence in function and specificity" /product="myo-inositol 2-dehydrogenase" /translation="MARIGLLGCGRIGQVHARSISQIEGATVTAVADAFAEPAQALAD STGAQVLDPLALIESTEVDAVVIGTPTDTHYDLIHAAARAGKAIFCEKPVDLSSDRIR DCIAAVERAGVPFLTAFNRRFDPNFADLQTRLRQKQIGEVEIVTIQSRDPSPPPVNYI QSSGGLFRDMMIHDLDMARFLLGEEMVRVYAVGSALIDPEIGKAGDVDTAAVTLTTAS GKICQITNSRRASYGYDQRIEVHGSGGMLRAENVHETTVEIATQSGFTRAPVQHFFLE RYKAAYHAEMSHFVAAIETGSAPTPSLFDGLQAQLLADAATRSWVEGGPVDLT" /EC_number="1.1.1.18" CDS complement(1635056..1636081) /locus_tag="Silicibacter_1518" /function="COG: Predicted membrane protein" /translation="METQSIAPRGRFVARAFLLKARDIGPGLALAAMIAMAAQFISDH YGAPVMLMAILLGIPFQFLSQEPRTGPGIQFAARVVLRVGVALLGLRVSVEMIHGLGM EFILVVFAGVFLTIICSIVLAPMLGKDRLFGFLTGGAVAICGASAALAISSVLPKTQD SERNLSFTVIAVTLMSTVAMIFYPILAESLGLDARHAGVFLGGTIHDVAQVVGAGYSI DTETGDFSTVVKLFRVTLLAPIVFLGALVLRNQVPAGAKRPPLIPGFVLAFLIFAALN SMHLIPEVLVQPSDTLSRAALVTAVAAVGMKTSIGELRSLGGSSVAMIVAQTIGLAVF VLAFVVM" /product="Hypothetical UPF0324 membrane protein plu2856." /transl_table=11 /note=", Conserved hypothetical protein 698, Conserved hypothetical protein 698, TIGR00698: conserved hypothetical protein" /note="Conserved hypothetical protein" CDS complement(1636088..1637863) /locus_tag="Silicibacter_1519" /function="COG: Cytochrome c peroxidase" /gene="mauG" /transl_table=11 /note=", Di-haem cytochrome c peroxidase, Di-haem cytochrome c peroxidase" /note="High confidence in function and specificity" /product="methylamine utilization protein MauG, putative" /translation="MRFFNLRWGHLFDHFFKTDRSVGVSTDGGQGVPHVGAHQVRGGH AAPNLIVPANAGLRAGMSFHGAAQVPFKGAGVVTFNAQTHGIHDADQFLGISIAGSRS WPKFLLGVLKVARLHQVPRLFDFSKTGGCDHPSQRGCNDPVRCKLHHLVSLLLTVFIA VSAPHWAAAAPDVPPALTPDDFMATDPAKAELGRLLFYDKILSGNRNISCGTCHHPRH GTSDGLSLGLGEGGHGLGSERQSDTGQNRVQKRVPRNAPALWNLGAHALEHVMHDGRV SRDPIYANGFNTPAEEWLPQGLQSLLAAQALFPMTSSIEMAGNVGENEVIGAARDRID AAWPILAKRVRVIPEYSERFISAFEDIRTAPDVNITHVAEALAHFMVQDFTSYDSPFD AYLSGDNTALSASQKRGADLFFGTAGCSGCHAGSLLTDQGFHALGLPAFGPGRTRKFD PYARDVGRAGESDALEDFYRFRTPMLRNVALTAPYGHNGAFPTLELMVRHHLDPVRSR EAWSPELLVLPDVTWLREIDFVIRQDRLEMARQAAARDIDIPPRTDAEVADLVAFLHS LTGARAEAQTSEIPKTVPSGLPVDR" /EC_number="1.11.1.5" CDS complement(1637976..1638290) /locus_tag="Silicibacter_1520" /translation="MILHCVFCNFSDEARAVEQHAVLSELRDFALSIRRCMSAEFGPN RDFEQKTQDYSYGFVLQFKDKDALDEYAKHPTHMALAARLVDLCVGGADSILVYDLEV ED" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Dimeric alpha-beta barrel, Stress responsive A/B Barrel Domain" /note="Hypothetical protein" CDS complement(1638379..1639437) /locus_tag="Silicibacter_1521" /function="COG: TRAP-type C4-dicarboxylate transport system, periplasmic component" /gene="yiaO" /translation="MLKTLVKTAALSVLLAGTALTASAADYTLRATANSNENDEDYDG LVVFKNYVEAASNGAIEVELFIGTQLCSNGAECLQGVADGSIDIYISTSGGASGLFPY VQVLDLPYLMADDRIAEHVLSGDFTRTMRDMALEDSGDTIRLMTIGNTGGWRNFANTK RRIAEPADMEGLKIRTVVADLPQELVKALGASPTPIPWPELFTSFQTGVVEGSKNGIT DIMGMKFPDAGLQYVTLDGHAYMGALWWMSNQSFQAMPEDMRRVVVDGFYALQQATFA SPKRKSIAAYEEFVAGGGDLYVPTPDQKAAFKEAASPVYDWFKSNVTRGDEIFTALTD AVAAAEAEIDADRAKDLK" /product="Putative ABC transporter periplasmic binding protein yiaO precursor." /transl_table=11 /note="TRAP dicarboxylate transporter- DctP subunit, Bacterial extracellular solute-binding protein, family 7, dctP: TRAP transporter solute receptor, DctP family, unique gene to TM1040, belas" /note="Conserved hypothetical protein" CDS complement(1639474..1640949) /locus_tag="Silicibacter_1522" /function="COG: TRAP-type C4-dicarboxylate transport system, large permease component" /gene="dctM" /translation="MLIWFLPVFLVLLMIGLPVFFSLLAAPGALLILNGQERDLTLLY RNLYNGMDSFPLMAIPFFMLAGELMNRGGITQRLVEFSQALMGHLRGGLAQVNILSSI LFAGLSGSAVADTSALGSMLIPAMEKEGYSRRFAAAITAASSVIGPIIPPSGIMIIYA YVMGESVAALFLAGIVPGVLVGVGLMVAVRLMANRYQLPEAKRVVFEKVEIGRMESVV SFLLVRLNLGLILSQFVPSGADATATTHWLIFLASLLAAHGLMLGLRRQVSHEFRLIC KRAVVPLQTPVLILGGILAGVFTPTEAAAVAVAYAIFIGFGVLRTMTLADLPDVLTRA GITSSVVLLLVGAAMSFKTVVSLSHAPEQLASFILTLSENPLILLFLINLLLFIVGMF LDAGPAIIILGPILGPVFADLGVESVHFAIIMCVNLTVGLATPPMGLVLFVAAAVSHE RVTTIARAILPFLAIEIAVIFLITFVPAISLTVPRLTGFLN" /product="Hypothetical protein HI0147." /transl_table=11 /note=", TRAP dicarboxylate transporter, DctM subunit, TRAP C4-dicarboxylate transport (Dct) system permease DctM subunit, dctM: TRAP transporter, DctM subunit" /note="Conserved hypothetical protein" CDS complement(1640949..1641539) /locus_tag="Silicibacter_1523" /function="COG: TRAP-type C4-dicarboxylate transport system, small permease component" /translation="MKPILALLAVLRPLNSGLLAVGRWIGVCAVAAMVIAILIQVFFR YVLGNALPWPDEAARFCMLWMTGLMAPTAFRRGGFVAIDVFEVLLRGVAVHLLQLVLL GIAMSVLILAFQIGYKEVGGIGGRFATASLYVPTSFAFDEWYRVPRSWMMMSLLIGVG LLILVCIELMLERVVHIFGQGDLLPARDKFTMGGAE" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Tripartite ATP-independent periplasmic transporter, DctQ component" /note="Hypothetical protein" CDS complement(1641597..1642115) /locus_tag="Silicibacter_1524" /function="COG: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family" /translation="MSIDGPTLTQSFEPDPSNTRLLRDAFGRFATGVTIVTAATEEGP VAITANSFSSVSLTPPLVLWSPDRNSRRFPYFERAEHYAIHVLAAEQGDLCWHVAKDA FGLKEMDLAVNDEGVPVLEGCLARFECRRTAIYDGGDHAIVLGEVRRATMREDGEALT FFKGQMGQFAAR" /product="flavin reductase domain protein" /transl_table=11 /EC_number="1.14.13.-" /note=", Diflavin flavoprotein A 1 (EC 1.-.-.-) (SsATF573) (NADH:oxygen oxidoreductase)., FMN-binding split barrel, Flavin reductase like domain" /note="High confidence in function and specificity" CDS complement(1642115..1643005) /locus_tag="Silicibacter_1525" /function="COG: Aldo/keto reductases, related to diketogulonate reductase" /translation="MDRVNLTSDLSFSRLVYGMWRIGDVKDTSPAHVEAKIAACLEQG ITTFDQADIYGDYGAEAILGGALKANPSLRDQMEIVTKCDIVAPIGRYADKSVKYYDT SRAHIMHSVETSLSEMGIEQIDLLLIHRPDPLMDHNETGAALDELVTSGKVRAVGVSN FRPWDWSLLQSAMKTPLSTNQIEISLGEVSPFTNGDLAFHQQHNHPVMAWSPLGGGGL MTATSELTKRMDAIAAAQGVDRAAVAVAFLLRHPAQILPVLGTNNLDRIKTISDATKV ELDRETWFKLYEAALGKEVP" /product="oxidoreductase, aldo/keto reductase family" /transl_table=11 /note=", Aldo/keto reductase, Aldo/keto reductase family" /note="Hypothetical protein" CDS complement(1643005..1644159) /locus_tag="Silicibacter_1526" /function="COG: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases" /translation="MTVVPVTSADLDAVEVSWFAALCSDDYQFLGVPDGNLRSSWAHC SNIVKEAEQQGFRNILCPSSYQVGQDTLSFVAGCAPITDKINLLAAVRCGEMQPIMLA RTIATLDHMLEGRLTVNIISSDFPGEKADSDYRYQRSREVVEILKQAWTRDEINYQGE VYSFSGLTTDPARPYQTGGPLLYFGGYSPAALELCGQHCDVYLMWPEKMEELQGRMQA VNAVAEKYNRTLDYGLRVHTIVRDTEAEAREYADYIVSKLEDERGSAIRERALDAKSL GVSHQAKNREIADSHGFIEPNLWTGVGRARSGCGAALVGSTDQVMSKLEDYQKMGIRA FIFSGYPHLEEAKHFGARIMPHLKTCSLPEAHGRVPSTAPATPLAVGERR" /product="Alkanesulfonate monooxygenase" /transl_table=11 /EC_number="1.14.14.5" /note=", Alkanesulfonate monooxygenase (EC 1.14.14.5) (FMNH2-dependent aliphatic sulfonate monooxygenase)., Bacterial luciferase-like" /note="High confidence in function and specificity" CDS 1644223..1644972 /locus_tag="Silicibacter_1527" /function="COG: Transcriptional regulators" /translation="MVYQFFLQGKLLPMTDAPISATSIPLYLQISESLIREIAAGRLV DGERLPPERQLAAQYGTTVRTLRKALLELEKQSLLERVQGSGNYVRSSQSAQSIYSMF RLELHQGGGLPHADILSVDYVKKPDDLPAFGTSAHGNRIRRLRYLDGVKIAIEEIWLD GDSGRVDPAQMSDSLYRYYRLNLGFWITRAEDRVSIARVPEWTPESFTKPAGEITGYI ERFSWAQTPDAVEFSRTWFDTDKALYVQRLT" /product="Putative HTH-type transcriptional regulator yegW." /transl_table=11 /note=", UbiC transcription regulator-associated, Bacterial regulatory proteins, gntR family" /note="Conserved hypothetical protein" CDS 1644981..1646087 /locus_tag="Silicibacter_1528" /function="COG: Predicted dehydrogenases and related proteins" /gene="yrbE" /transl_table=11 /note=", Oxidoreductase, N-terminal, Oxidoreductase family, NAD-binding Rossmann fold" /note="High confidence in function and specificity" /product="oxidoreductase, NAD-binding" /translation="MSKPTQYGIIGCGMMGQEHLRNIALLPDARVAAIFEPNALMQAE AAKFAPDAQFVDSVEALLAIAELDCIMIASPNFRHVEQLETLASQNPLPVLVEKPLFT TLDDLNRIEEFAAHYPAPVWVAMEYRYMPPITAFLNEADTATGGIKMLTVREHRFPFL SKVDDWNRFNAQSGGTFVEKCCHFFDLMRLALKSEPVRIMASGGQDVNHLDERYDGSV PDILDNGYVIVEFESGARAMLELCMFAEGSKYQEDVSAVGPNGKVEAFVPGPGRFWPS HLGDAPVPKLVLSPRNPKGPEERDIPVDPTILDAGDHNGSTFYQHQKFLELVRGERST PEVSLNDGKMAVLMGLAAQMSIAENRTVEISELL" /EC_number="1.1.1.18" CDS complement(1646189..1646893) /locus_tag="Silicibacter_1529" /translation="MNDASAHPDDPHYVNRSGWLRAAVLGANDGIVSVSSLVVGVAAA DPGPRPVLIAGIAGLVAGAMSMAAGEYVSVSSQSDVEQADIERERRALSETPEAELEE LIEIYEGRGLSRPTAEAVAKELTEKDALGAHIRDELGLSEVHTANPLQAALASGATFS VAAAIPVLAAILSPASAIIPVVLIVTIFALAILGALGAIAGAAPIAPAVIRVVGWGVF AMVVTAVIGWLFGVSV" /product="Nodulin 21 (N-21)." /transl_table=11 /note=", Protein of unknown function DUF125, Integral membrane protein DUF125" /note="Conserved hypothetical protein" CDS complement(1647084..1647929) /locus_tag="Silicibacter_1530" /function="COG: Response regulator of the LytR/AlgR family" /translation="MKTELTTRQVFSYVFRDATPRKTLVICLAGTLVCAVLLALFEPR ASRDLPFLWALFHWAAHLAGGLGVLIAVYLTAQRAGLSDRWRVALAVAALPFGVAFLS VGIETLIAAAIGEPQFRADGYWEELQHVALPAISLTSVALLAVFKAVEMAFARQSEIL SRFAKKPSLRTLFPELPAALGEDLVSASANDHYVHLRTTEGSAMLSRRFSDCVEQLSA FDGVQVHRSHWVHLAHVSHVRTNGSSYLCSMLDGTEIPVSRRKHADLKLSLQHFTKTA RRDTI" /product="Sensory transduction protein lytR." /transl_table=11 /note=", LytTr DNA-binding region, LytTr DNA-binding domain" /note="Conserved hypothetical protein" CDS 1648175..1648951 /locus_tag="Silicibacter_1532" /function="COG: Outer membrane protein V" /translation="MQSKSNLAALGAALCVLLSTPAHAENKLVSGAVGLGFGTGPTFP GADENDSGLFPVVDLKIGQYVVVNQRGLGLEHSRSLGHGELSYGLGVGYDFTSRSVED DLRLAGLSDVDAGAMATLFLEYQTGPFSYGLEVMRGLNSDGHEGTRAKLSGGYDIQLS ERAGLSVSPYLIWADDNWMDSFFSVSNAQSVASGLAAYDANAGMSQAGLNLTASYALR EQVIVFASVDYATLLGDAADSSVSFDDNAASLSAGVMFRF" /product="Putative outer membrane protein yiaT precursor." /transl_table=11 /note=", MltA-interacting MipA, MltA-interacting protein MipA" /note="Conserved hypothetical protein" CDS complement(1648071..1648202) /locus_tag="Silicibacter_1531" /translation="MLPGSICFAFFETFQSQNSHRGEHIGAVGKNLSETLGQDSEST" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1648962..1650173 /locus_tag="Silicibacter_1533" /function="COG: Fumarylacetoacetate (FAA) hydrolase family protein" /translation="MRYSVLLLCAGLSLAATIWLTLDEDPKRRNHFNAESTPLKMGVL TPEDGITLALTRTASGDTPHILLITEANREGVAAIDLTAGNWTGATDFFEVLDEIGAG NLAKIALRANRGELSIERFEYDRLLPAAGSATRHVASGTNFPEHQEEANAQGVFNFPK FGAATPPVTSVETSPQTLLDYEVEICARFDRDIKTVEDFDAARKGFFLCGDFTDRAVL SRLVDPDNLDSGTGFSDAKSGPGQFPSGGLFVVPNTWQDFVAEERLVTWVNEELRQDT RAGDMILSFRDLIENVLADTQRQRFLYRNRYWHLVNDGTIGRGQVLMSGTAEGVIFMP PTLRQILRGALKYVTEGDVFKGTSPYTSVVASFIKEELASGRYLQPDDRVTHLSSHMG LISTQIVEGER" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(1650260..1651633) /locus_tag="Silicibacter_1534" /function="COG: Predicted unusual protein kinase" /gene="ABC1" /translation="MSRRDEGNMVADAGALLPNGDTVSTDAIKVPAGRVNRLMRLGGL AAGIAGGATLQAIAGIARGTRPDARSLLASPANVRRVADELARMRGAAMKIGQLLSMD AGEVLPPELAQILARLRDRAHIMPPSQLGQVLEREWGAGWRRQFKRFDVRPIAAASIG QVHRARTRDGRDLAIKVQYPGVARSIDSDVSNVGALLRLSGLLPKGFDISPYLAEARR QLHEETDYAREGAQLKRFAEWLTDSDTFVVPQYHADLSTAQILAMSYVAGQPIETLAD ADAATRNRVMTALVDLSLREVFHFGAMQSDPNFANYRYVPQSGRIVLLDFGAARDLHP LVTKSYADMLRSGLVGDDHGIWDAARALGLISDGPDIGSSEARLLALIAGVFEVLRAQ EFDFADQTLIRALNEEGMALAQSGYHPPSLPMDVLYLQRKFGGLFLLGNRLRTKLCLR DIIDPYL" /product="Probable ubiquinone biosynthesis protein ubiB" /transl_table=11 /note=", Probable ubiquinone biosynthesis protein ubiB (Aminoglycoside acetyltransferase regulator)., Protein kinase-like, ABC1 family, UbiB: 2-polyprenylphenol 6-hydroxylase" /note="High confidence in function and specificity" CDS complement(1651630..1652862) /locus_tag="Silicibacter_1535" /function="COG: Deoxyribodipyrimidine photolyase" /gene="phrB" /transl_table=11 /note=", Cryptochrome 2 apoprotein (Blue light photoreceptor)., DNA photolyase, FAD- binding N-terminal" /note="High confidence in function and specificity" /product="similar to deoxyribodipyrimidine photolyase" /translation="MATQEPQIGPATRAEALLRMEAFTPRMGLNYATFRNHDYGPQRQ SAVSMLSPYLRRRLLTEPEVIAAALAAHGPQEADKFVQEVLWRGYFKGWMERRPEVWA NYITGRDADFVALEEDPGLAIRVNAAETGETGLAYFDTWAKELVRTGYLHNHARMWFA SLWIFTLKLPWRLGADFFLRHLLDGDPASNTCSWRWVAGLHTRGKPYVAQASNIARFS GGRFAPQESELATEVTGLMDEEPEGLPHVNPLRSVLSPEEAKPTAVLLTEEDCMPASA DLASLDIRGAARLYCSHLRSPRRVAAAVSTFEEDALADTVARIGLDAQPWAASEPEAL ADWVQSIGAQQIFMPYATVGPLGDWIARALPLLRARGVAVAEWQRDWDGLVWPHATAG FFKVKKRLPDILTKAGLT" /EC_number="4.1.99.3" CDS 1653075..1655738 /locus_tag="Silicibacter_1536" /function="COG: FOG: PAS/PAC domain" /gene="atoS" /transl_table=11 /note=", Histidine kinase, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase" /note="High confidence in function and specificity" /product="sensor histidine kinase" /translation="MHAHRTSKETPDVSVTRERPGPVLCNALDILDEGFVLFDRDRKL VFANKSYAAMLGPHAHLLEPGRAMQEIISQAVASGHIRILRGAEQGMPAFLAALGTLD SATIEISVKDGTQREINLTCLEDGHLVAKVKDVTEQRTAEARARTLLNKAIDAVDFGI ALTDENDRLVFANQKYREVADPDGALLEPGRHIVEAYSQAIETGVFQLPEGSTAAEIL SELQDLIGSAAKGFSLTSSTGREIVGNIYETDLGGKLLTLEDVTDQLRAERLYTDAVG RLPVGVAIEEASGTLSHCNNAFAEPFGHSAEDLMKLSDTERFLSLAPMIQSIAGQDVG TRGVEIFSAAIKKQRDTLQPMEVCFRNGRHFLVERAITEGDGRVVVVTETTALKEAER RSLETLTDTIQSLEEGLVVFDSDAGFLLGNRRWRDLFFGDTSEPAPGERVSMLWQRLV CAGAICTPAGTTPEAYAQQLDQFTQSLGQNETLFLRDGKTLLVSAHRTEQQGFLLTFV DVTEQRRAEAEQREADLLLRKIVDACPANFLVSRVDDGKIIYCPPPSRERFGNITSTL SFFLNAEDRQTYLDALLPTGALDDYRVQFRRADGSIMQGITAARVTEYKGEQVIVSST RDISDLLAMQEELQQQRDAAHQAEKLSALGELLAGVAHELNNPLSIIVGYAQMLEGRL QDKVLSKRVDRIAEAADRSARIVRAFLAMARQRPTKIEPCSLNDIVLAALDVAGYGMR SSGTEILSELDDDLPLVSGDADQLVQVFSNLIINAEQALAPLGQAGRLTIRSSFDPAQ NQSVVEIRDNGPGIPAAIRARIFEPFFTTKDVGKGTGIGLAFSHRIVDAHGGQLDLET TEGEGTRFFVRLGVHDTGRPLKNDPEDDTTP" /EC_number="2.7.3.-" CDS 1655799..1656119 /locus_tag="Silicibacter_1537" /function="COG: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain" /translation="MLEDLRCVPTLATDARAALGVLEQDGFDMIVSDFKMPGMNGAEF YDALLNRHPQYADRVGFVTGDALSEDIFRFLSKVGRPHIEKPILRDDLSALLERLTCK GVNG" /product="Putative transcription factor SKN7 (POS9 protein)." /transl_table=11 /note=", Response regulator receiver" /note="Conserved hypothetical protein" CDS 1656116..1656832 /locus_tag="Silicibacter_1538" /function="COG: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /gene="risA" /translation="MTHAAEAKRILVCDDEHHLREMLSEYLCERGYEVMEAENADAML AVFNDDTPDVVVLDINMPGTDGLTALRTLRVNSTIPVIMLSAAGEVVDRIVGLEMGAD DYLAKPVDLRELEARIKAALRRQGFAGEESAQRDRMTGTVPFGMCRLDLDGAKLFGES GEEIAITSMEFSLLRVFAQNRGRVLNRDQLLEQAHDRGWEHFDRSIDLRISRLRRKIE QNPTKPETIRTVRGIGYIFD" /product="tresponse regulator protein" /transl_table=11 /note=", CheY-like, Response regulator receiver domain, PhoB: phosphate regulon transcriptional regulatory protein PhoB" /note="Hypothetical protein" CDS complement(1656936..1658411) /locus_tag="Silicibacter_1539" /function="COG: RTX toxins and related Ca2+-binding proteins" /translation="MTIKLLKPFSNVLGWNAKKGLVEPSDSSDPSRGDAETQRDPVEE TDPISRGDTQPDTETNDGRDTGGSDTPDRGDDRDPDRGGNDGPPSMSVSANIFTRFDT NLAEPGFLTPGLANGLNITPGNIWIDWNGENAFEGTHGVDKAWGLWGDDDIYLYDGND VAYGGAGNDLLHGGRGNDALYGGIGNDFIIGDVGSDTIDGGSGNDRLQGGRGNDMING GDGNDRILGEEGRDVVRAGDGDDFIEGGDDNDLMWGDEGRDTMLGGDGDDQVFGGIGN DLLQGGLGNDHMEGGGGADVLVGDQGNDLINGGSGNDMMTGDLGNDELNGGTGNDTME GGAGNDIMRGGEGSDFIYGDGGNDYIQGGGGNDHIYGGTNSAGDIGDYLFGGEGYDLF YFDFGDSGANGGPRDVIQDFSAGGGDLMVFQGFGATTWRGGDGFSGGVGAEAYFEQTV SDEFGAVTHVYLRDDIGHEADLSLTLLGYIDLTESDVFVIA" /product="hypothetical calcium binding protein" /transl_table=11 /note=", Serralysin-like metalloprotease, C-terminal" /note="Hypothetical protein" CDS 1658862..1660112 /locus_tag="Silicibacter_1540" /function="COG: Glycine/D-amino acid oxidases (deaminating)" /translation="MRYSALRLIKESLTGHRGWGPQWRDPDPQASYDYVIIGGGGHGL ATAYYLAKEFQGRRIAVLEKGWIGGGNVGRNTTIIRSNYLLDGNEPFYEFSLKLWEGL EQDLNYNAMVSQRGILNLVHTDAQRDAARRRGNAMILNGSDAELLDTDGVRALYPFLN FENARFPIKGGLLHRRGGTVRHDAVAWGYARGADQLGVDIIQNCEVTGFRVENGRVTG VETSRGLIRAAKVGVSVAGSSSRVMAMAGMRLPIESHVLQAFVSEGLKPFIRGVITYG AGHFYCSQSDKGGLVFGGDIDGYNSYAQRGNLPVVEDVVESGMSLIPGLGRARLLRSW GGIMDMSMDGSPFIDKTHIEGLYFNGGWCYGGFKATPAAGFCFAHLLKTDRPHETAKA YRLDRFMTGHMIDEKGQGAQPNLH" /product="sarcosine oxidase, beta subunit family" /transl_table=11 /note="identified by match to putative ortholog SPO1588 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1660141..1660437 /locus_tag="Silicibacter_1541" /function="COG: Sarcosine oxidase delta subunit" /translation="MIINHPLLGPRDAQEFTYLGDAGLINRPYWLSENAMRAFHDYLH LRENPAGLHRELWFHEQGDRSWLVVTRDTTTHEITKVELARDVARASRSAEVSQ" /product="sarcosine oxidase, delta subunit family" /transl_table=11 /note="identified by match to putative ortholog SPO1587 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1660434..1663388 /locus_tag="Silicibacter_1542" /function="COG: Uncharacterized NAD(FAD)-dependent dehydrogenases" /translation="MTQVNRISGGLIDRSTELNFTFDGKNYQGYAGDTLASALLANGV RLMGRSFKYHRPRGVLAAGSEEPNALVELRSGGRQEPNTRATVAEIYEGLSANSQNRW PSLKHDVMAINDRFSAFLSAGFYYKTFMWPRAFWEKLYEPVIRKAAGLGSLSGEGDPD AYDKGYLHCDLLVIGAGPAGLSAALTAGRGGAQVILADEDFQLGGRLLSDAQSLCNQS NAEWVAATQAELIALPNVRVMPRTTVFGAYDHGVYGAVERNADHLVAPEENKPRQTLW RIYSRRAVVAIGAIERPIAFENNDRPGVMLAGATRAYANRWAVTPARSVVVFANNDDA HQTAKDLIAKGIEVHAVVDTRSDAPGIEGTELLAGAQIIGTKGRLGLTSVTVRLLDGR TRDITCGALAMSGGWNPNLGLTCHQRGRPVWREDIHAFVPGSDLPAGQSVVGAAMGEM STHAALRTGAETAREALSDLGFTAPGVETPKAEDAPISLTPFWHVADAKRAWLDFQND VTVKDVKLAHQENFTSVEHLKRYTTLGMATDQGKTSNVGALAVMAELTGKPIPETGTT IFRPPYTPVSMGALAGRAVGKDFHPTRLTPSHKWAEEQGAVFVEVGNWLRAQWFPKAG ETHWRQSVDREVLATRNSVGICDVTTLGKIDVQGTDAAEFLNKIYANGFAKLPVGKVR YGLMLREDGVAYDDGTAARLAEDHFVVTTTTANAVLVYRNMEFARQCLWPDLDVQLIS TTEAWAQYAVAGPNSRKLLQKIVDPEFDISNAAFPFMGCREITVCGGLRARLFRISFS GELAYEIAVPTRYGDALMREMMTAGAEFDVTPYGTEALGVMRIEKGHAAGNELNGTTT ALNLGLDRMVSTKKDFIGNVLSRREGMNAKDALNLVGVRPVDPSHSLPAGGHLMRRSG PVDATQDQGYVTSAAYSPTLKSAIGLGFVKSGFERMGEQLRLVNPLEGQEILVEIVSP HFVDPEGEKLRA" /product="sarcosine oxidase, alpha subunit family" /transl_table=11 /note="identified by match to putative ortholog SPO1586 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1663381..1663932 /locus_tag="Silicibacter_1543" /translation="MHRLKPLTPMGAVTPRVDTIGTLTITEIVHQALASIAAREGQME ALQQKLPLPLPDVGKTRTQGAFSAFWTGPAQWMIVANHDQHEALAYEIKQMVGQTASV VEQTDGWCRFDVSGAALYDLFERLSSAPVRRMTKGDVIRGTVERLGAFLWRLDQDHMA VIAPRSSAASLHHALIAAARSIA" /product="sarcosine oxidase, gamma subunit family" /transl_table=11 /note="identified by match to putative ortholog SPO1585 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1663944..1664891) /locus_tag="Silicibacter_1544" /function="COG: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain" /translation="MACLTSCIEPLRAANEISGREAFQWKVVAEDAGPVVSSAGVSFA PDCTLSDTTELDLLLFTASPSARFAEPSRANAALQRLQRRKARLGAISGGVFALARTG LTRENPLSVHWCYEAAFHAEFPEIPAQSTVICEQGDYTTISGASAAFDHMLTLIETHL GGDIMAEVACWFQHPYIRSAAAAQKTPVHDTAKSQNLLPKQVARAIEHFAEHIESPIQ ISKVAEAVGVSTRSLERSFKQATGQGPLKYYRKMRMKQARQLVLYSNTPVTEIAFMVG YATPGAFLRHYRESFGMTPIADRRAKNSMRVKGSDALPS" /product="HTH-type transcriptional regulator glxA." /transl_table=11 /note=", ThiJ/PfpI" /note="Conserved hypothetical protein" CDS complement(1664957..1665862) /locus_tag="Silicibacter_1545" /function="COG: Transcriptional regulator" /translation="MALKIEMLRGFATVARSGNLSDAAQVLGRTPSAVSMMLKQLETH LGEPLFETDRKSKLTALGAFVLEQAERELQQFDNMVRAIEGFAKATHGHVRIATVPSV AGTIIPQVFSRHINDYVNVDIELRDMDSHSILHELSRDRIDIGIATLGQQGAGLSSQH LLSDTFGVICAPSHELADSTGPVTWEALADERLIANSLSAGISAAASVALHDRAMLSA HNLTSILGMVQANIGITILPEMAVRASNSAGLVFRPLTEPHAKREIHMLRRADSNQSP AARLLERHILQIAKEISRDTVMRHS" /product="transcriptional regulator, LysR family" /transl_table=11 /note="identified by match to putative ortholog SPO3192 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1665974..1667422 /locus_tag="Silicibacter_1547" /function="COG: NAD-dependent aldehyde dehydrogenases" /translation="MTDIQKNLIAGEWLTGEGEIENRNPSDLSDLVGIFAQASSDQLE ATLDQAKVAQREWAAYGLERKQAVLMAIGNELIARSEELGTLLSREEGKPFAEGKGEV YRAGQFFTYYAAECLRQIGENADSVRPDIEIDVRREAVGTVAIISPWNFPTATASWKI APALCYGNAVVWKPANVTPASAVALAEIINRQDIPKGLFSLVMGAGRTVGQRLVESPK VNAISFTGSVPVGKGIAAAAIQNLTKVQMEMGSKNALAVMDDADLNLAVSLALGGAFG GTGQKCTASSRLVVHAAVHDAFVEKLVAGAQAMKVGHALHDGTQMGPVVSAQQLEENL AYVDLGRSEGAELACGGTRLEMPHDGFYMSPGVFLNTSNDMRINREEMFAPLTSVIKV DSYDEALATVNDTNFGLTSGIVTKSLARATHFRRNAQTGVVTVNLPTAGTDYHVPFGG RGDSSYGPREQGKAAAEFYTTVKTAYISAGPV" /product="aldehyde dehydrogenase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3191 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1665896..1665988) /locus_tag="Silicibacter_1546" /translation="MNIGHDVSPHTEVSFLGYGLFAMLQSNSNN" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1667422..1668402 /locus_tag="Silicibacter_1548" /function="COG: Zn-dependent dipeptidase, microsomal dipeptidase homolog" /translation="MRIDGLQYANWSEKIFRQLREGGVDAIHVTIAYHENFRETVLNF EKWNRWFEQYPDLIMKGQWAQDIDIARETGRTAVFFGFQNPSPIEDDIGLVEILHSLG ARFMQLTYNNQSLLATGCYEAEDMGLTRMGKQVVKEMNRVGLVIDMSHSSDRSTIEAA EYSTRPIAITHANPHAWSPALRNKKDAVIRAVTENGGMFGFSVYPHHLRDKSDCTLES FCEMIARTADTYGVEHLGIGTDLCQDQPDSVVEWMRVGRWTKEIDYGEGSKSAPGFPR MPSWFEDNRDFENIEQGLRSVGMTTGEVAAIMGGNWYRFFAESFGPKAGG" /product="renal dipeptidase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3190 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1668471..1670015 /locus_tag="Silicibacter_1549" /function="COG: Choline-glycine betaine transporter" /gene="opuD" /translation="MSDTSLETHLKKSRLNTPLFLISGGFIALFCIAALIDLEGLSAA VDWGFNVSATYFGLYWQVLLLATFLIGLVLCVLPGGKAIMGNLAAPEFTLFQWGSMIM CTLLAGGGVFWAAGEPIAHFLYSPPLYGAEGGTEAAVNPAIAQSFMHWGFLAWAILGS LSTVMLMHYHYEKGLPLAPRTLLYPLFGDKAINGPIGLIADASSIIAVVAGTVGPIGF LGLQVSYGLSDLFGLPDVFATQFMVIGGLVAIYTISAMTGLSRGIQLLSKINVILAAA LLIFVLVAGPTGFIFGSFFSGFGTYLGNFFQMALFRGDAGVFGEPGWLGWWTVFFWGW FMGYGPLMAMFIARVSRGRSIRSIIIMLSIIAPIVTNFWFTIIGGTGISMELAAPGTI STAFEGFNLPAALLAITSNLPMGFLISLLFLILTTIFVATTGDSMSYVISATMSDGEN PPTMVRIFWGVAMGIMAIILISVGSGGVSKLQSFIVVTAVPVSLILLPSLWDALRITI AKGREQ" /product="L-carnitine/gamma-butyrobetaine antiporter." /transl_table=11 /note=", BCCT transporter, BCCT family transporter, bcct: choline/carnitine/betaine transport" /note="Conserved hypothetical protein" CDS 1670128..1671831 /locus_tag="Silicibacter_1550" /translation="MTTIPRRDPNLVMRLARLGSIHQSRLSFMRVLTRRLAREGWQFE RTAFDVNSAGEGHAVYTAYGPERAYSLIAFAHDLPPEKRSDRVIADAWDTTFTLFDGV PSAEDIKRLSQNIPLQEAGRVTGSELSVSRANRSVRLWEHVVSSLAQGRQPDPNRINA VGYLMRTTAVYGSGKLGAADREMIADRPEFSAPFQVEMLSVYLTRWFVLDLVQHMANQ RAAAMGQDAAQLCPAIARSTGIGNSTGLGMAPFLLNHPVLFNNWIAAREAAIQTVRQI ETASASAIALFRSLIARGRVTIDTWQSEHPIQITKINALRADLLKLEEYLSETDLSAR FPWDALYRWAEGTLSLEGQEWIASLILEPYGARVDKFADEMSADNTATFRIAGAMSVK DLRALLTDIYAWAIETDWQAPENRARAWYVSEEKLEPRLGERFEEPIEAFEQPLAPGR DAAQLFNALAHWPDEAQVADFLLRHPEHRHVLRRAQIVGRAPYAEIRDNTISAQVLPI DMLRCKLAFFGATQFDPRSDRWVRICMYGGAPLPTELTPENADFWVFPETDPVLEEGA A" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3189 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1671828..1672478 /locus_tag="Silicibacter_1551" /translation="MSHSLNEIEAMAKRAGRGAGLSWGLAEEAAKGTRWLSSFGFPGT EMLAELLELNDQIPPIDVSPVSLSAALWHAPARRMSPLIAGASLSDCAVRLLDRGTIT MQDVSLPLLAVPFMGGAALRLGVPVAAEWEGARLATDGKQLCVQGEPDALRAGHAGLL VFSAPADMTGKREPVMRADVSEQSWETLGEFAHRTFAPATEESRLRGAGAGTNDNS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3188 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1672512..1673546 /locus_tag="Silicibacter_1552" /function="COG: Malate/L-lactate dehydrogenases" /translation="MSDRQERTEMTATETLTLSEIESLAFDALVAAGTSPANARPLAV ATAMTEADGVASHGLAYIPIYAQHVECGKVDGQANPKVAHPRPAVITVDAATGFAHRA IDLGFEQLIPLAKEMGVAVLAVNNSYNCGVLGVHTQRLAQAGLMGFGFTNAPASIAPS GGAKPVVGTNPFSISAPGSDGTAALLIDQSASTIAKSEVMKHAREGKPVPQGWVLDAD GQPTIDPDAGLKGSMVPSGGYKGVGIALTVELLAAAMTGATLGAVASPFSGTAGGPPK TGQFFIAIDPDATSGGLFQEKLADLISAFRDQDGARLPGDGRQSARLRAATEGVRVNA ALLERVRALI" /product="malate/L-lactate dehydrogenase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3187 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" tRNA complement(1673779..1673851) /locus_tag="Silicibacter_43" /gene="Silicibacter_43" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS 1674227..1677238 /locus_tag="Silicibacter_1553" /function="COG: Putative homoserine kinase type II (protein kinase fold)" /translation="MDHWASAMEQHWGIQAELRQLDGEYDLNFLAETPEGTGYVVKAM RPDCEDWLVDMQIRTLDHISAADADLPCPRVIPARSGQKMLRLEDAHGNARLVWVIER LAGKCYAEAAPKTDALIAQVGQILARTTVSLQDFDHPHLARDFKWDLMQADWVNGALD CLEDGARRALIADIGDQFTALKPALAKLPQQAIHNDANDYNILVNGGAGTGIEPKISG LIDFGDMCRAPRICDLAIAAAYVVLDHPKPEAALTALVSGYHAENPLSAPELDLLWPL LRMRLAVSVVNSTLMATENPHDPYVTISQAPAWRFLEGHDLNGDLMAARLRAACGLPV VEGADRVMAWLDEARGSFAPLMGQDLTDVPMGSLSVEKSLWPQNPFDMPLAEAARVGE EFNTEDQIWLGYYHEPRLIYTAPAFRNGPWKASDRRTVHLAVDGFAPAGTTLHAPLEG EVWVVENRDSHLDYGGVIILRHKTPEGDPFYTLYGHLDPEVVTRLQPGDPITKGEAFC RLGTAEENGGWAPHVHFQLALSCDGIETDWPGVGSPDDMYLWRALCPNPAALLNLPDD KTCYRPTDKSTVLEKRRAHFGGNLSLTYSDPVMLVRGWKHHLFDEWGRPYLDAYNNVP HVGHAHPRIQAVAADQLRRMNSNTRYLHPAQTAFADKVLSKLPDHFEVCFFVNSGTEA NELALRLARAHTGAKGMVTPDHGYHGNTTGAIDLSAYKFNKPGGVGQADWVELVEVAD DYRGSFRRDDPDRAQKFADLVDPAIATLNSKGHGIAGFIAETFPSVGGQIIPPKGYLP AVYEKIRAAGGVCIADEVQTGLGRLGEYYFGFEHQGALPDIVVMGKPIGNGHPLGVLV TTKAIAESFDNGIEFFSTFGGSTLSCRIGKEVLDIVDDEGLQENARARGAELISGLRA LERKYACVGDVRGVGLFLGLELIHADGSEATEICSYVKNRMRDHRILIGSEGPKDNIL KIRPPLTIEAEDVEMLVSVLDEVLAEINPAE" /product="M23/M37 peptidase/aminotransferase, class III" /transl_table=11 /note="identified by match to putative ortholog SPO0791 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1677329..1678246) /locus_tag="Silicibacter_1554" /function="COG: Transcriptional regulator" /translation="MERFSNPNSILAFVIVAREGSVSRAADVLNLTQPAVSHQIRRLS EDIGVTLFTRTPRGLDLTPDAQHLLPKAEEVLRVMAEFRRAASQHSDHISGTLRLGTI IDPEFIRLGRLLSQLGASNPRITTELVHGVSGEILERILRRQVDAGYYLAAPDQLEAL PSETELHAQKLADFAYRIIAPPGWDARVAGAGWAELARLPWIGTPEVSVHNRLLSRIF AEHDCQQNTVAQVDHEASMLEMVRSGVGLSLCRESIALHQRQSNGVVICETLSVPASL GVLTLKDRLEDPLIAAFFDQLSAVWSPIS" /product="LysR-family transcriptional regulator" /transl_table=11 /note=", LysR, substrate-binding, LysR substrate binding domain" /note="Hypothetical protein" CDS 1678327..1680054 /locus_tag="Silicibacter_1555" /function="COG: Choline dehydrogenase and related flavoproteins" /translation="MPTSSKAMSGELVGQKIKGDSIVSDMETHFDFIVIGGGSAGCLL ANRLSADPSHRVLLLEAGKADTYPWIHVPVGYLYCIGNPRTDWLYNTEADKGLNGRVL KYPRGKTLGGCSSINGMIYMRGQARDYDNWARLTNEPDWTWERSLEDFKAHEDHHKLD DGADPVTGDNSRFSDMHGHGGEWRVEKQRLRWDVLDSFAEAATQTGIERTEDFNSGDN AGVAYFDVNQRSGWRWNTSKAFLKPAKSRRNLTVWTEAQVEKLTFETTDGALRCTGAL LHHKGQARQVTARRETILSAGAVNSPQILQLSGIGPAALLKKHGIDVLKDAAVGENLQ DHLQIRAVFKVNGTRTLNTLANSLFGKAMIGAEYLLKRTGPMSMAPSQLGAFTRSDPS RSHANLEYHVQPLSLDAFGEPLHDFPAMTVSVCNLNPTSRGTIKIRSGDFRDAPLISP NYLATDEDRKVAADSLRQVREIMSQPAMQPYAPTEFKPGTQYQSDEELAKLAGDIAST IFHPVGTVKMGKDEDPTAVLDPHLRLKGVASLRVVDASIMPEITSGNTNAPTLMIAEK AARWILAEA" /product="oxidoreductase, GMC family" /transl_table=11 /note="identified by match to putative ortholog SPO0971 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1680087..1681055) /locus_tag="Silicibacter_1556" /function="COG: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)" /gene="fdh" /transl_table=11 /note=", [EC:1.1.1.122] , Aldo/keto reductase, Aldo/keto reductase family" /note="High confidence in function and specificity" /product="D-threo-aldose 1-dehydrogenase" /translation="MKRNRIGTTDVWVSDVSFGCASIGNLYREISDAQAQEVLQTAWE AGIRYFDTAPHYGRGLSEMRLGQFLYNKPRDTYVISTKVGRVLSPGSPLDEADGFINP LPNAVRYDYSGDGIEASLDSSRSRLGTDYVDIVYVHDIGTLTHGAANVGHMEDFWGSG YERLVTLKERGKIGAFGLGVNENQICLDVLAQGKLDVILLAGRLTLLDRSGEEELVAT CARAGTSLVLGGIFNSGILATGPIEGATFDYVPAEPEVLARVEALQRRAAELGLSLPA AALHFGRDHPASASLLLGTAKAQQLQRNLDLMAQEAPQDMLAAFDR" /EC_number="1.1.1.122" CDS complement(1681072..1682349) /locus_tag="Silicibacter_1557" /function="COG: Enolase" /translation="MTKITGLRTYDLRFPTSEGLDGSDAMNPDPDYSAAYVILETEGT HEGHGLTFTIGRGNEICIAAIKALGALVVGLDLDWIREDMGRFWRHVTGDSQLRWIGP DKGAIHLAAGAVVNAVWDLWAKDTGKPVWRLVADMSPAEILRLIDFRYLTDVLAPEEA LDLLKAAEPGKEERIARLIEEGYPCYTTSAGWLGYSDEKLRRLCREARAAGFTHTKFK VGRDLSDDIRRLTIAREELGEDMNIMIDANQVWEVDEAIDWVNRLAFARPLFIEEPTS PDDVLGHKAIREGVAPIKVATGEMCQNRIMFKQFIASGALDIVQIDSCRMGGLNEVLA VMLVAAKYDLPVWPHAGGVGLCEYVQHMSMIDYVAICGEKDSKRIEYVDHLHEHFKHP CIVTGGAYQAPHAPGFSIEMKEDTLDAFLFSDG" /product="putative racemase" /transl_table=11 /EC_number="5.1.2.2" /note=", [EC:5.1.2.2] , Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D- glycerate hydro-lyase)., Mandelate racemase/muconate lactonizing enzyme" /note="High confidence in function and specificity" CDS complement(1682346..1683191) /locus_tag="Silicibacter_1558" /function="COG: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)" /translation="MKLLRYGPLGQEKPGLLDQDGNIRDLSGQVADIGAATLGDAGLD ALRALDPQSLPLVEGTPRIGACVGQVGKFICIGLNYADHAAESGMSLPEEPVIFFKAT SAICGPNDAVEIPRTSVKTDWEVELGVVIGKTAKYIGRDEALDHVAGYCVVNDLSERD FQLHRSGQWVKGKSADTFGPIGPWLVTRDEVPDPQNLAMWLEVNGHRYQDGSTRTMHF DVATVISHLSQFMSLQPGDVISTGTPPGVGMGQTPETYLKPGDVMELGIAGLGVQRQV TEAAE" /product="fumarylacetoacetate hydrolase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO2435 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1683210..1684001) /locus_tag="Silicibacter_1559" /function="COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /translation="MGDDGRSFSHGLNTMTQNTGRLAEKTALITAAGQGIGRASAELF AAEGAKVIACDINAESLAELAEVDGITALALDVTDASAVARAIQDAGPLNVLFNCAGY VASGSILDCDENDWDFSFDLNVKAMYRLTKLVLPGMLENGGGSIINMSSVASSLKGVP NRFAYCASKAAVIGMTKSIAADFVTQGIRCNAICPGTVDSPSLHDRLRATGDYEQARK DFIARQPMGRIGKAEEIAALALYLASDESGFTTGQTHAIDGGWAI" /product="oxidoreductase, short chain dehydrogenase/reductase family" /transl_table=11 /note="identified by match to putative ortholog SPO2427 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1683965..1684294) /locus_tag="Silicibacter_1560" /translation="MQRMGMVIGIKPERLDEYKRLHAAVWPDVLAQIRQSNIRNYTIF LREPENLLFGYWEYHGSDFAADMARMAQDPRTQEWWAFTDPCQSPLPSRNAGEQWAMM EEVFHTD" /product="Hypothetical protein yiiL." /transl_table=11 /note=", Protein of unknown function DUF718, Protein of unknown function (DUF718)" /note="Conserved hypothetical protein" CDS complement(1684294..1685403) /locus_tag="Silicibacter_1561" /function="COG: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily" /gene="manR" /transl_table=11 /note=", [EC:5.1.2.2] , Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D- glycerate hydro-lyase)., Mandelate racemase/muconate lactonizing enzyme, Mandelate racemase / muconate lactonizing enzyme, C-terminal domain" /note="High confidence in function and specificity" /product="mandelate racemase" /translation="MARITRVELRMIDLKPKVERVDAIQSFVSQETPIVTIHDSDGAS GTGYSYTIGTGGPSVMALLEQTLVPALIGKDADRIDGIWRDLLFLTHATAVGPITSLA LAAIDIALWDLRCKKMGLPLWKAAGGSRDRIPLYSTEGGWLHLETAALVEDALAMKEQ GFRGSKIKIGRAHLSEDRARLGAIRAAVGDSYEIMTDANQGFTLSEAIRRAKVLEEFG IGWFEEPLPADDVLSHQELSRRTHVPIAVGESMYSLSQFKDYLQVGAAQIVQVDVARI GGITPWLKVAHLAEAHSVMVCPHFLMELHLPLVCAVPNAKWLEYIPQLDGVTRQNMQI SNGDAVPSDEPGLGIDWDWDAITAQEIGARSIGGA" /EC_number="5.1.2.2" CDS complement(1685408..1686502) /locus_tag="Silicibacter_1562" /function="COG: ABC-type sugar transport systems, ATPase components" /translation="MTEVTLTDVIKRYGQHQAVHGINLDIQDGEFVVLVGPSGCGKST TLRMIAGLEDISGGEVKIGGRVVNDLPPRERNISMVFQNYALYPHMTVRENLGFSLKI AKRPEAEIERAVTEAAQILGLDELMERKPAALSGGQRQRVAMGRAIVRQPDVFLFDEP LSNLDAKLRTQMRVEIKKLHQKVGNTVIYVTHDQVEAMTLADRIVLMRDGHIVQTGTP LDLFNAPVDTFVATFIGSPPMNLVDGIVTETGALRLGDHITLPMPSEARGAVRPGQEI SFGFRADNLMPDGHSVEESGQMAPLELEVALTEPLGTETLLFAEFAGREVQAKMLNPR PVQPGERLPFHLMLDKCHVFDRKSGKALRG" /product="putative ATP-binding ABC transporter protein" /transl_table=11 /note=", ABC transporter related, ABC transporter, 3a0106s01: sulfate ABC transporter, ATP-binding protein" /note="Hypothetical protein" CDS complement(1686506..1687369) /locus_tag="Silicibacter_1563" /function="COG: ABC-type sugar transport system, permease component" /translation="MDRNLNHRNRRRMLKALHFTGLFLTMAVICIPGLWIVLNSFRPT VEIMAKPPVWTPSFTLEHYRAMFGGAGEGGVPVFQYFRNSLIVSVTSTLIAILIGMAG GYAFARYRFKGKSGYFVGLMLFRAVPGVALSLPLFIVFARVGIIDTHFGLILAYVAMN VPFTIWLTDGFFRQIPKELHEAAEIDGCTRWQAFWRVEFPVARSGVASAAIFAFLTSW NEFALASQLTRSVGSKTMPVGLLDFTAEFTINWGGMCALAVLMIVPALILTFIVQKHL IAGLTFGGVKG" /product="sugar ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO3786 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1687375..1688271) /locus_tag="Silicibacter_1564" /function="COG: ABC-type sugar transport systems, permease components" /translation="MRPKRLPEWFVLLLPAFIVMAAVVLIPLLFSLYSSFTPYKLTRP STLWRWVGTYNYEKILSDWKFWSAFGRTVLFLTIVLNLELLLGLGIALMMNKVTWGQR TLRTVLMFPMMFSPILVGFQFKFIFNDNIGLVNNALQSLGISDAALPWLVDGKLAMFS IIFAEIWMSTSVFAILILAGLFAMPRDPLEAAKVDGCTAWQTFRHITLPFLMPFIYIA MTIRSLDVARAYDIVQIMTGGGPARRTELLWTLMSRTGYVDARMGLANAMGYVSILLS IVFTIYFFRKLSAARAELGMAG" /product="sugar ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO3785 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1688350..1689672) /locus_tag="Silicibacter_1565" /function="COG: ABC-type sugar transport system, periplasmic component" /translation="MKKSKFTKGLLASCAVLASAESALSSDWGSFEGVTIEAKLIGGQ QYEGLYGRIADWEAATGAKVEIISKKSHFEIDREIKSDMAAGTTDWCIGSNHSSFAPQ YEGLYVDLNDYVDASVIEGFVPGTITASTVGGDLLMLPRAQFDVSVLYYLKSNYEDAQ KAEAFEAQFGYPLAVPQTWEQVKDQAIFFADPPNFYGTQYAGKDEAIVGRFYEMVVAE GGNFLDEDNRPIFNSDAGQRALQWFVDLYEAKAVPAGTTSYVWDDLGQGFASGTVALN LDWPGWAGFFNNPDSSKAAGNVGVAVQPMGSVTRTGWSGHHGFSVTDDCANKEAAASL VAFLTSEESQLAESAGGSLPTRTAVWEANIAKARAGDDPFRTEALEAFAEGAKYAFAV PPIPEWGESTNLVFPELQAAIVGDKTVEEALDDAAEAVDELMRESGYY" /product="Probable amino-acid ABC transporter periplasmic binding protein y4oP precursor." /transl_table=11 /note=", Bacterial extracellular solute-binding protein, family 1, Bacterial extracellular solute-binding protein" /note="Conserved hypothetical protein" CDS 1689817..1690623 /locus_tag="Silicibacter_1566" /function="COG: Transcriptional regulator" /gene="kdgR" /translation="MTQTADKYRAPALEKGLDIIELLADYGDGLAQGDIARALDRSQS EIYRMLTTLVRRGYVVRSPGDDLYTLSLKMFALSQRHPPIGRLLETAAPQMRMLTRKA WQSCHLGMESNGDVVIVASAESPGNWGLALRVGTVIGLGNTGTGRVLAAFRPEDELSD LVAQHRLAVGEPPIDAFELRDHIARIRELGYERMPSATAVGVTNLSYPVLNQDGRAIA VLTCPFLERIDDMKPPSQDEVHRMCKALAEDLTAFYCGTGDRTLFEGLEP" /product="Pectin degradation repressor protein kdgR." /transl_table=11 /note=", Bacterial regulatory proteins, IclR" /note="Conserved hypothetical protein" CDS 1690620..1691480 /locus_tag="Silicibacter_1567" /function="COG: Predicted metal-dependent hydrolase of the TIM-barrel fold" /translation="MIDTHQHFWRLSRGGYAWMPEDLPALNRDYEPKDLRDILNDTGI TGTIAVQADDSVAETEFLLSLSDAHPWILGVVGWVDLEHADATRILTALAEHPKFLGI RPMIQDISDPEWMLRPTLAAGLNRLVELDLTFDALVLPHHLKTLARFMERYPELRVVV DHCAKPNLRSGALDEWRDGLAAVAAHPNSFCKLSGLLTEAPPGAGLAELRDCLDHVSQ LFGPNRLLFGSDWPVLNLATDYAKWQRIICQYIDETPGLAQDTIGQLNPHFAYTRLSQ HCTNPNGAGA" /product="Hypothetical 33.9 kDa protein y4MH." /transl_table=11 /note=", Amidohydrolase 2, Amidohydrolase" /note="Conserved hypothetical protein" CDS complement(1691483..1692073) /locus_tag="Silicibacter_1568" /function="COG: Predicted transcriptional regulator containing the HTH domain" /gene="scpB" /translation="MRKTPEPQLDRELKALPPDQRWYEWLRRIEAVLFASATPVSREA LARVVGQGVSVELLIDDLSAELESRSFQVAHVKDGWFLRTRSAYASAIRDAQSAGHQV MDLNAFDVAVLAAIAYHQPITREGLKDIFGKDISRDLIGRLHDRGLIGNGPRAPRRGA PYTFVTTDQFLLAFDLETLQDLPDRERLEDAGLARG" /product="Segregation and condensation protein B." /transl_table=11 /note=", Prokaryotic chromosome segregation and condensation protein ScpB, Putative transcriptional regulators (Ypuh-like)" /note="Conserved hypothetical protein" CDS complement(1692076..1692960) /locus_tag="Silicibacter_1569" /translation="MYAPDRESLTDQNRIPFLPSWVTSARAEAPEYVSFLSGAALSHL HHAISLDEVPMNLVRDRLALRAAEVTVAFAGRHETAAELRDAVHFLEPGDLPGPAGEI YLSWQRAVRRPVQANALHKGLGSVSSQLIAQSLAPKGRAPVEHAVSVLEECVSDDSIP VVAALILADAALARSLGWARILPVFALGLTTADLRKRDQSLRLACHQALQVAIIEILR HISECTRGVRNLAAVVPKLRAKGAAGAVEVFLTQDAAAASALPLPDRAARRLCDRLTS LGVLRELSGRDSFRLYGV" /product="hypothetical protein" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1693150..1694013 /locus_tag="Silicibacter_1570" /function="COG: Site-specific recombinase XerD" /translation="MGPTESTISEHTRKAYATDWAHYTRWCRLNGHPTLPPSVAHIEN YLTDLSRSSQLASSSLRRRRAGIVWNYRQRGFDLEIQSTPLPDTVTALPTHQVQRPAT KEAITPQEMRAMLATLPYDLRGLRDRAMLLVGYIGGLRRSEIIGLDASPDRSDDSMGG LEFRDNFLRVTIEARTEVRTVTLHRGTSAQTCPVHSVQQWLHFAKIEAGPVFVRTSRD GKRALSARLNDRHIPRLIKSTVLRSGIRADLPENERLALFSGQSLRVASAKLATADNR VDLNLTRALGF" /product="Tyrosine recombinase xerD." /transl_table=11 /note=", DNA breaking-rejoining enzyme, catalytic core" /note="Conserved hypothetical protein" CDS complement(1694019..1695101) /locus_tag="Silicibacter_1571" /function="COG: Predicted transcriptional regulators" /translation="MAKRRRLIAPDASEIEALDEGFAAKPSVNPFETGQKSAPPIAKV SAETAKLRGMAAVTDRVELARDKADANKWRDAENAGQAVRQIPLAEIDRDYLRRDRMQ VDEEELQELIASIQSHGLRSPVEVVALEDGRYGLVSGFRRLEAFARLNLNRDGFSEIP AFLRQGTDSATAYVSMIEENELRANLTPYERGRIAVLVAGQGVFASVEEAVDTLFAAA SKAKRSKVRSFAAVHEGLGDLLRHPNAMSEKAGLKIAAALRAGGQAVLRRALGTADPD NERDEWRVIEAALAELEATPKDKARGGRPRQVTQLQTRSLASGGELGAEVSPKGVRID LKRANLDVDDVERLLEAIEKHLLAEG" /product="Probable chromosome partitioning protein parB." /transl_table=11 /note=", ParB-like nuclease, ParB-like nuclease domain" /note="Conserved hypothetical protein" CDS complement(1695103..1696566) /locus_tag="Silicibacter_1572" /function="COG: ATPases involved in chromosome partitioning" /gene="repA" /translation="MPLMGYASPKMFSILPYITTIHIHSSRSSNLMSTPPLPPYFNLD PEKAASKLPDPIQTTRFAKAAALCTKGREDLARRGYAPDGEKRLRKFSTWEITRYLIP VAPQHLRRVLKANPELPQGDGDGGSKWFTLEEVLILRQHFASEGISTKEYLPYRPEGL PAKVTAVANFKGGVGKTSTAAHLAMSAALDGYKVLVIDLDSQGSMTSILGGQIEDEWS TVFPLIAKDYAKAMVEENAVRAAAGEPELPLDETLNEALRVSPRNVIQKTHWPNIDLI GAQLNLYWAEFQIPVWRMGLRSWPLWDALSNFLQDEGILDEYDIVFLDTPPALGYLTI NALAAADILLVPLGASFLEFDSTGRFFDMLYSTFASIEEGENVAQRAAGLPEIKFEWD VVRALITRFDASQQTDMANVIQAYFGDFMNAYRQDVTALVGQAGEQVNGIYEADYRDF NRDTYVRGRETFDRTYAEFKELLIGSWWRDTQMKEAE" /product="replication protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0304 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1697155..1698447 /locus_tag="Silicibacter_1573" /translation="MADQSFDGDRLSGALSRETVKKNVAAIHISGKLTLLQRKLSNVL LLNAYDSLTSARSHTIDARTLAMMVGYNSNDVDSLRASLRALAETVAEWDMLDEQGHQ EWGVSALLSFAKLKNGVCEYAYSPALAQKLHDPKIYALINVKIQRNFTSGHGLALYEN CYRFVRTGSTGWWSLDIFRKLMGVDGSSYYESYKHLNAKIIKPAVAEVNKSSDIIIEP QTRKKGRSVSDIRFIIKENPQMAMFQIDDSEGLRNLAVYKALRGQGVSDRLARQWITE HGQDYVQEKLDYVAGQGEVKSSVGYLRAAILGDYSAPETTKGTVQKKVDPETQAKLDE LQRAREAEKAAEDAAFKARAAERRERAKHLDIVETLVSRRNPTQKDADKRLFVSRLES DLDREHFRQHGWRSALNAAAIISFWQELEPDAFAEDVE" /product="Replication initiation protein" /transl_table=11 /note=", Replication initiation protein (REP protein) (Protein E)., Initiator RepB protein" /note="High confidence in function and specificity" CDS complement(1698521..1700035) /locus_tag="Silicibacter_1574" /function="COG: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /translation="MANPLFDRLFGVYAGKTTPFLYLADGQVWTHARFLDQVAQIAHV LIKAGLTPGDRVAVQVEKSPEALALYGACVQAGLIFLPLNTAYTADELSYFIENSGAS LVICDGQNQSTLATIAEGLNASVETLNADGSGSLIERAAAMATDFETVDRSGDDLAAF LYTSGTTGRSKGAMLTQDNLLSNAETLVKEWRFTDKDVLLHALPIFHTHGLFVASNVT LLAGGAMIFLPKFDLDRVIAQLPKATSMMGVPTFYTRLLSDPRFTKELTQHMRLFISG SAPLLAETHIQFEERTGHRILERYGMTETNMNTSNPYDGERRAGTVGFPLPGVELKIT NPETGTSLPRGDIGQIEVRGPNVFQGYWQMPEKTAAELREDGFFITGDLGMIDEDGYV HIVGRNKDLIISGGYNIYPKEIELVLDEQSGVLESAVIGVPHPDFGETVLGIIVPETG TSPDLESIMTSVQGQLARFKHPRKLMVVDELPRNTMGKVQKNILRDSYKDMFSD" /product="long-chain-fatty-acid--CoA ligase, putative" /transl_table=11 /note="identified by match to putative ortholog SPOA0282 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1700096..1700299) /locus_tag="Silicibacter_1575" /translation="MALSRALGDVVNRDKQITFEQHKQLRARRKRQRPGRFERLGAWM HFTLLEKLPTTKGISRSQGRMPL" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1700674..1701693 /locus_tag="Silicibacter_1576" /function="COG: AraC-type DNA-binding domain-containing proteins" /translation="MGWISTVFVHKALDAAVSLASADEDARGKLFKSVGLDPSAPVDP GAMISDGDFFGLLERIAKLDDRGRFVPVQMGASMCCDDYGAFGLAFKSAPDLLSSYAR VERFGKVVTSIANFRVKQVGPSVFMEVVQGGDPRLGLRMTNELALAATMSLSQEVSSE DFSPVAVHLMTERPEVDDVYHAHFRCPVHFGADHDALEVATTAAVRSNRLSDNGMSRF FETHLDNQLSQISDRSELEQGILDQIGEALSEGVPTLAEIAGCMGMSSRTLQRRLSAE GLAYQDLVSSARKSLSEQLLRRTDYALAEIAFLTGFSDQSTFTRAFKRWHQQTPANYR RGTPV" /product="transcriptional regulator, AraC family" /transl_table=11 /note="identified by match to putative ortholog SPO1057 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1701818..1702675 /locus_tag="Silicibacter_1577" /function="COG: Predicted nucleoside-diphosphate-sugar epimerases" /translation="MASKPILITGATGKTGSRVMGRLKSLGFDARSGSRKAPVPFDWD NPATWEKALRGIGAVYVNYHPDYAFPGAIANLTRFTRVAASCGIERLVILTGRGEHHA QLGEAVVAKSGLDYTIVRSAWFAQNFSEGALWEPVMEGVVPMPGANLAEPIIDIDDLA DVIAVSLTGEGHSGQTYDCTGPRLLDFAEVADILSGAMGRRVNYLPISFDDFHAELAA TSGTVFADIVTGIARETFDGRNAVLGDGVMRALGRQPRDFTEFAQSAALAGKWANAAW EMKTNRSTS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1056 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1702672..1703100 /locus_tag="Silicibacter_1578" /translation="MKLNRFQQIILGISGVTACAIGTLIALAPHAFYASYGITLGQDP NLLNELRAPGAGLAVFGALMLAGMFRAAMVPISLGVALTVYLAFPAGRIVGIVLDGMP AGSVIGALGFEILIAGLLLVAFRPMRKVDASAERFVDLSR" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO1055 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1703157..1703324 /locus_tag="Silicibacter_1579" /translation="MFDEMNEDACSVRYATQEDHALGIVRFVAAGIYETSGNKPSTLH ARVSQEPSPPL" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1703394..1704617) /locus_tag="Silicibacter_1580" /function="COG: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF" /gene="nqrF" /transl_table=11 /note="identified by match to putative ortholog SPOA0033 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit" /translation="MTTFGLGVLLFTLIVVALVTIILAARSKLVSSGNVNITINGEKT ISVPAGGKLLQTLAAEKMFVPSACGGGGTCAQCRVRVHSGGGSILPTEESHITKREAS CGDRLSCQVAVKQDMDIEVPEEVFGVKKWECTVRSNENVATFIKNLVLELPEGEDVNF RAGGYIQIEAPAHKLSYKDFDVEEEYRPDWDKFNLWQYESTVTEPIERAYSMANYPDE KGLIMLNVRVASPPPGSTGIPPGQMSSYIFNLKPGDKVTISGPFGEFFARDTQKEMVF IGGGAGMAPMRSHIFDQLKRLENRDRKITFWYGARSKREMFFVEDFDQLAEEFDNFEW HVALSDALPEDDWKGYTGFIHNVLYEEYLKNHPAPEDCEFYMCGPPIMNQSVINMLLE LGVDREDIMLDDFGG" /EC_number="1.6.5.-" CDS complement(1704631..1705239) /locus_tag="Silicibacter_1581" /function="COG: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD" /gene="nqrE" /transl_table=11 /note="identified by match to putative ortholog SPOA0032 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit" /translation="MEGLLSLAVKAIFVENLALSFFLGMCTFLAVSKKISTAIGLGVS VMLVQGITVPANNLILTYLLAPGALAWAGFGDVDLTFLGLISYIGVIAAMVQILEMLL DKYFPPLYNALGVFLPLITVNCAILGGSLFMVERNYDFAEAATYGLSSGFGWALAITA MAGVREKLKYSDIPDGLQGLGITFITAGLMALAFMSFSGVKL" /EC_number="1.6.5.-" CDS complement(1705239..1705892) /locus_tag="Silicibacter_1582" /function="COG: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE" /gene="nqrD" /transl_table=11 /note="identified by match to putative ortholog SPOA0031 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit" /translation="MAQTYRSQLVDPLIDNNPITLQVLGICSALAVTSSMQVAFVMAL AVTFVTGFSSMFISMLRNQIPSSIRIIVQMVIIASLVILVDQLLKAYAYEISKTLSVF VGLIITNCIVMGRAEAFAMKNPPVASFIDGVGNGLGYGLLLLIVAFFRELFGAGSLFG VTILETVNNGGWYVPNGMMLLPPSAFFVIGLLIWGIRTWKPAQVEEREYKIQTVEAH" /EC_number="1.6.5.-" CDS complement(1705892..1706704) /locus_tag="Silicibacter_1583" /function="COG: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC" /gene="nqrC" /transl_table=11 /note="identified by match to putative ortholog SPOA0030 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit" /translation="MSDANENKGLIRRFIDAPPDSVGKTIFVAVALCLVASMVVSAAA VALRPVQEENKLRDKRINVLQVAGVYEEGVSVTEAFAAFEPHVLDLSTGAYTDQFDIE TFDALAAAGDPAIVRALDEDPAGLGGSMQAYRMIYLLRDEAGAIDKVILPIEGYGLWS TLYGFIALEENGNDIFGLQFYQHGETPGLGAEVDNPRWKALWNGKKLFAEDGQLAITV AKAAPPEGKEYHVDALAGATLTSVGVDNLVKFWMGEAGYGGFLERLKAGEID" /EC_number="1.6.5.-" CDS complement(1706697..1707956) /locus_tag="Silicibacter_1584" /function="COG: Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB" /gene="nqrB" /transl_table=11 /note="identified by match to putative ortholog SPOA0029 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit" /translation="MNMASPCATASARSKERDKTLGLRNFFDRIEPQFLKGGRYEKFF PVYEMVESFIYTPKTVTTVAPHARSYIDMKRIMTYVVIATIPCILFGMYNTGLQTNMA IAEYGASGWRAAILETLGIGFDPNNPFANIMHGLLYFLPIYIVTLVAGGIFEVIFAVV RGHEVNEGFLVTSMLYTLIVPATTPLWQVALGIIFGVVIGKEVFGGTGKNFLNPALVG RAFLYFAYPAYMSGETVWTPVDGFSGATALAIGASEGHAALPERGIEWMDAFIGTIQG SFGETSTLAAMIGLAFLLIVKIANWRLVVGCLAGMIAFSTLLNWIGSDTNPMFAMPWY WHLVLGGYAFGLAFMVTEPVSASHTNMGRYIYGALIGFMVVMIRVINPAFPEGMMLAI LFGNVFAPLIDYFVVQANIKRRAKRNV" /EC_number="1.6.5.-" CDS complement(1707901..1710201) /locus_tag="Silicibacter_1585" /function="COG: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC" /gene="nqrA" /transl_table=11 /note="identified by match to putative ortholog SPOA0028 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit" /translation="MRVALAIDVKEVAVIARGGHAHVRKPNHLGHATVKSLGRLNPDL PGLTIGVAPSGVEIATDLDHVVGDAIALEDSGQLINTEPFSDGGQIDLGASVKLLEAT GLKLDRLRLTAAPHGSRNLGLGGKIAAGLTRAKAPKIDETTHGHVKRTVACKMHVLRS LHHMMQLARDRQALASGQRVELRHLGRGIPVGHLHVDLRQRLVDSRLQLCFLDGFAVI DRNDRVACPHRQPAEFQQRPPFLAGHQGKRHDHKATARKEKRVRHRPTPLVLLGVQRL VPCASGTETGRVQQEIIKFPSKELSNRAAVTHKAAGKWTGHEDVQQHTLKKGLDVPVL GAPDTKIEDAAKVRTVAIIGQDYIGLKPRLSVQEGDVIAAGAPVLAHKDTPEVQVTAP VSGRVKAINRGARRVLVSVEIEVDEAAAEPVDFSTIGDDSSAEGLRTRLCASGLWTSF RTRPYSKVPAPDTAPAAIYVTAMDSEPLSGDAATIINDQAEAFARGLQAVTLLTEGKT YLCQDSGATIPGADLASVTAVGFAGPHPAGLAGTHMHFLEPPTAEKTVWTIGYHDVIA IGHLLLTGRINSERVIALSGPKCSRPRLVRTLNGASMTDLCAEDLGGEDPIRVISGSI LSGRAGEGTTAYLGRYARQITLIKEDREQIPMGWIRPMPSKYAVQPVLGSAFSKKLHA LTSNLNGGRRAMVPIGTFEQLMPQDFLPTQLLRALLVMDTDQAQALGALELDEEDLGL CGFACPAKYEYGLALRDSLSKIEREG" /EC_number="1.6.5.-" CDS 1710475..1710714 /locus_tag="Silicibacter_1586" /translation="MSTFLLTFGLFLIVMVGMAFGVMFSGRTIKGSCGGLNAIADADK CLVCKKDIDPDSPLRERLACPRARKMLEEMEREQG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0037 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1710839..1713967) /locus_tag="Silicibacter_1587" /function="COG: Cation/multidrug efflux pump" /translation="MISEVFVRRPRLAMVISIVITIAGLIAMSAIPVAQYPEIAPPTV QVSASYSGADTATVEEAIAVPIESQVNGVSGMRYMRSNSNNAGEYSLTVSFELGEDPD LATVNVQNRVKLAEPRLPQAVRDQGLQIKKASTDILQVFTFHSDDPAHDQLFLANFVA INIIDELKRIDGVGDVFNYGVRDYAMRIWLDPQKMSDREMSVDDIVSAIRSQHLQASA GRIGAAPLVEDGAGLQMTIVTKGKLTSADEFENIILRSETDGSFVRVKDVARVELGAA TYDVETRFEGTPSAPIAVFLSPGANAVAVAETVRHKLEELQERFPDGVSYSFIYDTAE FVEAMIKKVEHTLIEAFVLVGIVVFVFLGRLRPTLIPLIAVPVSIVGTFAVLLALGYS ANTISLLAMILAIGIVVDDAIVVVENVEKVMHEEPHLSPADATRKAMKEITGPIIAIT LVLLSVFVPVAFLPGSSGVLFRQFAVTISAAMVISAINALTLSPALCAILMKPGEPIR FMRRVSDGIDAFSRGYGNLIRRLARLAVLSLALTALFGFATFRLGSITPSGFLPAEDK GFILAVATLPPGASLDRTTAVLEAGDALIRQEEGVESIVTIAGFSLIDGGLASNAGIV FIRLADFADREDPAMHSTEIVRRITGRLQQIGGANFIALNPPALPGAGATGGFEMMLE ALQGQSPREMAAVMNGVVVSANQDPRLSAVYSTFEAATPQVRLDIDRDRLYTLGLTLP QVFSSLQGTLGGVYVNDITLFGKGFTVWVNGDADYRGNIGAINNIRIRNASGEMVPVS SFATARLESGTRSQVRYNNYRAVAINGSPAAGVGDGDAITAMEEIGAATIPDGFAYEW TGMASEVKSSAGQTGIVLGFALLFAYLFLVALYESWNVPVGVMLSVVAAVMVAIFGVW VAGSSLDVYVQIGIVVLIALAAKNAILIVEFALLRLGEGKSIEDAAALGAQERFRPVM MTSFAFIAGLVPLVTASGPGADSMFAVGVPVFAGMIGSAVIGVILIPLLFIVFEHMRS WSRRASPAADSQ" /product="hydrophobe/amphiphile efflux-1 family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1397 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1713979..1715124) /locus_tag="Silicibacter_1588" /function="COG: Membrane-fusion protein" /translation="MASSIDRRTDQFCAWIRLNCLLICALTALPLSAAAQDQNAAPPP PAVTVAIIEERNFQEAETFSGRIEAIQSVDLIARVQGYLSARHFEEGAFVEKGQPLYT LDQDIYRNTVHQAEAALAVAQATETLAQQKFDRQEELTRRDVQSRALLEEAQANLAVS QANVAAAQSQVEAARINLAYTEISAPISGLIGRSAVATGDLISPQSGPMATLVQFDPI YASFPVPQRSMIDFRKRGARNEDVFVSLTLADGSVYPHHGVITFTDVSAASSSDAVIV RATVPNPDNLLINNGLVDVHLVANADSRALALPAQALLLDQQGAYVLVVDGDDRVQAQ RVEVGTQRAGYLEVKDGLEAGARVIVEGIQKARPGNRVTVSLVNTDN" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Secretion protein HlyD, HlyD family secretion protein, RND_mfp: efflux transporter, RND family, MFP subunit" /note="Hypothetical protein" CDS 1715359..1715769 /locus_tag="Silicibacter_1589" /gene="wblP" /translation="MSISKCRIIDLPRIADARGNLTFIEGQNHIPFDIKRVYYLYDVP GGSDRGEHAHKNLHQFMVCMSGSFDVCLDDGFESKRIQLNRSYFGIYICPMIWRYLDN FSSGAVCMVLASEPYDEADYIRDRDEYLRAVRAS" /product="conserved hypothetical protein" /transl_table=11 /note=", WxcM-like, C-terminal, WxcM-like, C-terminal" /note="Hypothetical protein" CDS 1715766..1716866 /locus_tag="Silicibacter_1590" /function="COG: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis" /gene="wblQ" /translation="MSVSFLDLSAAYAEVSAELEAAAQRAMRSGWYIGGPEVTAFETA FAKFCDAKDAIGVANGLEAIEIALHAFEIGAGDEVIVPANTFIATWLAVARRGAVIVP VEPDPETYNITPEAVAEAITPRTRAVIPVHLYGQPADIDGIMRVASERDLIVIEDAAQ CHGARCHGARIGSVGHAATWSFYPSKNLGALGDGGAITTNHAEAAARMRLLSNYGSSQ KYIHDLPGTNSRLDPLQAAMLSVKLPLLDEWNRRRQAVAAEYLDALAETALVLPKIAD WAEPVWHLFVVRHPDRDDLMTALRERGVETLIHYPIPPHRQNAFKDLGFGEGAFPITE QMSQECFSLPMGPHLSTDDTQRVIAALKELLA" /product="Daunorubicin biosynthesis sensory transduction protein dnrJ." /transl_table=11 /note=", DegT/DnrJ/EryC1/StrS aminotransferase, DegT/DnrJ/EryC1/StrS aminotransferase family, ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase" /note="Conserved hypothetical protein" CDS 1716863..1717828 /locus_tag="Silicibacter_1591" /function="COG: Glycosyltransferases involved in cell wall biogenesis" /translation="MTSPSGEASACPRCSVICLTYNHAAYSAAAIASVAEQTYPNIEI IVVDDGSTDGNADIVEAALKSCGRPYKFLRQENTGNIAMNMNRGIAAATGDYMSMFSL DDLLLPDCIATKMELLIADPKLVFVANTCNMEVDGAGRVTDPLYKSGLYELEIATAEA LLELEFEHIGLLYMQGVVISAHVVRAIKGYDEDLKGDDLIIRTKIFRHMQAHPELGFC LLHRPGVQYRKHSENIHRNSWRQVKLALEWRDRFFPDRSMPHLWRVWVVRALKTSIAE GDMDTVTTMTSEHSEISEVYNGYRGSWKFWRNMAKNKIRQLFARA" /product="Polypeptide N-acetylgalactosaminyltransferase 5" /transl_table=11 /EC_number="2.4.1.41" /note=", Polypeptide N-acetylgalactosaminyltransferase 5 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 5) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 5) (pp-GaNTase 5)., Glycosyl transferase, family 2, Glycosyl transferase" /note="High confidence in function and specificity" CDS complement(1717889..1718830) /locus_tag="Silicibacter_1592" /translation="MTDLTVKPYDASEADAWNAFVAASRNGTFLHDRRFMEYHADRFH DASLVVKRAGKVLALLPANRSETQVVSHGGLTYGGVIVGNDMRTGLMLETMAAISAYL RQTGATQLIYKPTPHFYHSAPVEEDLYALSRLGGRLIQTDASAAIPLSRRPKESQSRR QAAKRAAKEGFVVSETQDWSAFWGILTDVLAERHEAAPTHSLAEIEQLAQSFPSRIRL FGAMQGNTMQAGVVSFDCGRCIHIQYIAGNPEGRAAGAIDAIILHLIQSVFADRDWFD FGISTTEGGAVLNPGLAQQKEMFGARCVIYQRYALDL" /product="conserved hypothetical protein" /transl_table=11 /note="Hypothetical protein" CDS complement(1718827..1719756) /locus_tag="Silicibacter_1593" /translation="MAWHKLGRVYCADGFADWAQHSFMTPVPVQMSADVIRLYGGMRD DAGISRIGWVDLDAHNPLRVIAVCDAPALDLGEPGMFDDNGVILGDVIRTSEAELRMY YVGFQLVEKAKFLAFTGVAISDASGTRFDRVFPTPVLDRAPEALFINALHSIAQTETG FRAWISCGQRWQDINGRIYPQYNCWTVPSEDGLHFDMRDAVKIMDVNEAEYRIGRPRA NRLADGSFELRVTSDTFDKHYSSHLAHSKDGIVFQRSDEVELPRGAPGDWDAEMTCYP ARIDTPTGRSYLFYNGNNMGETGVGVAEWQAEA" /product="Hypothetical protein Rv1502/MT1551." /transl_table=11 /note="Conserved hypothetical protein" CDS complement(1719758..1720432) /locus_tag="Silicibacter_1594" /function="COG: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase" /gene="pglB" /transl_table=11 /note=", UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) (FirA protein) (Rifampicin resistance protein)., Trimeric LpxA-like" /note="High confidence in function and specificity" /product="UDP-3-O-" /translation="MTTPLLIVGAGEFADIAYEYFTYDSDYDVVGFAVEAAFREGDTH CGLPLIDLETVEDHFDPLEVKAHVAVTNTQLNRVRERLVGVMREKGYGLANYISSHAF VWRTAELGENVFIFENNVVQHGVKIGDGVVLWSGNHIGHQTEIGEFCFLSSHVVVSGY CKIGRRCFVGVNASFADNIEIGEDCFVGLATVVNKSFKEPGQLLTGHPAEPSRVSTYR YFKLKN" /EC_number="2.3.1.-" CDS 1720669..1722351 /locus_tag="Silicibacter_1595" /function="COG: Predicted O-linked N-acetylglucosamine transferase, SPINDLY family" /translation="MTIAFSPRDLTPLYASAVALLNAGNLAAAREQLLRSLHEEGETA LSYHYLAQILERAGGPGTEVLAAQANALKCAPNHPVFLAALGVRLVDAGRDQDALVLL RKALEIDPQNPLALPWVMRLNRRYLQWTSYEEEAAACEMLLKSAHKVDPLLSLTFVDD PAQQLKIAARSAPDVAVQPLEPHAPHEKIRVGYFSADFSEHATMHLIEGLIEAHDKGV FEFHVYDFKPDPTSRQHQIIRDFADCYHDVSALSAAETAALARQEQLDIAVDLKGITT DSRPMIFALRVAPVQVSFLGFPGTTAIAEMDYMIADRITIPDGDERFYSEKILRLPGC YQPNTNSRILPEGAGGRAAFGLPDDRFVFASFNHPHKVGPSEFATWMEILREVPQAVL LFYSGKADLGAALAERAQAHGVEPSRVLACGPLPQTAHLERIAQVDLCLDCFAYNAHT TASDAVWAGVPLLTLAGRQFAARVATSILSTAGVPELSTVSTKDYVAKAVHLATHPED LLALRQKISAARHGSPLFDTKRWTRDYEALLQMCYQRHRAGEAPDHMSLSDG" /product="UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit" /transl_table=11 /EC_number="2.4.1.-" /note=", UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit (EC 2.4.1.-) (O-GlcNAc transferase p110 subunit)., TPR repeat" /note="High confidence in function and specificity" CDS complement(1722356..1723255) /locus_tag="Silicibacter_1596" /function="COG: Predicted sulfurtransferase" /translation="MYTIAALYQFSRFPDPAALKPALLALCLEHDVKGSLLLAHEGIN GTIAGPRAGIDAVLAHIKSLPGCADLDWKEATADHPPFGKMKVRLKKEIVTMGQPDVD PRASVGHYVEPEDWNDLIRSDDVVVIDTRNDYEVAIGTFEGAIDPKTESFREFPQWWE ENKDRFHNKRVAMFCTGGIRCEKSTNFLLGQGVEDVYHLKGGILRYLEEVPQDQSSWQ GECFVFDNRVSVGHGLKEGPHELCHGCRRPILPEDKERPEFEAGVSCHNCINETSAQD KMRFRERQKQIRLARERGDIQEA" /product="rhodanese-like domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO0091 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1723448..1724053 /locus_tag="Silicibacter_1597" /function="COG: Amidases related to nicotinamidase" /gene="pncA" /transl_table=11 /note="identified by match to putative ortholog SPO0093 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="pyrazinamidase/nicotinamidase" /translation="MEAAVTQALLVIDVQNDFCPGGALAVTEGDEVVAPINAMMERFD TVILTQDWHPKGHSSFASSHPGHAPFDTMEMYYGQQVMWPDHCVQGSQGAEFHPRLRT DGDMIIRKGFRPEVDSYSAFFENDQTTPTGLEGYLRTRGISDLTLVGLATDFCVAFSA LDARRLGFSVEVELAACRAIDLDGSLATQLENMRQKGVKIS" /EC_number="3.5.1.19" CDS 1724137..1726407 /locus_tag="Silicibacter_1598" /function="COG: Signal transduction histidine kinase" /translation="MEQTQPDTDGPLSQHNARFSPRGLLIRYAVIRARMYYARMFAAA GLTSVLAVIFGPFWPLVFFVLYLITDKAETTYLRGLPERLENGTSLAKAKRIIFVFSV LYAGSVCGFAAIPYVQMHTEAGAHEILAEPFFALCIVLGPALSAALDLRYVPLAASVR LLMLSLLPFGLTAHILLQNQTHGADLQLMVAGLVAFFFTQIWFVVMVQKRHRNSRRNL RSQALQRQALEDAYMRLFDQKQEARRLAMIAEHANDGVMLIGRDGIVRWANDGFSRLT GYTFDELVGQNPGKILNSENTDPAALRVIEAGREKGEPFRAELINRRKDGKEIWIETN QVPVFDDTGQIETYIAVERDVTATKEYERQLKEARLAAEEGARIKEEFLATMSHEFRT PMNGVIGMAQMLQATDLSEDQRLYTDTILGSSRALLALINDVLDLSHMNAAGVSLFNV DFDLHACVGDIVRLLSGQADEKHLELSVEIDPDVPVWVTGDDRRLRQILVNLLGNAVK FTTSGSIFIRLRGVVTGDQVALKIEVEDTGIGIPADKLEKIFERFSQADNAISRKYGG SGLGLSISRGLAQAMGGDIDVTSVEGEGACFTLMLDMGVADCPSIVADEAEDADSLPA LDQLQGLRLLVAEDNRVNRLLIRKFLDDAPLELRFATNGAEAQELAKRFRPQVILMDM SMPEVNGLEATRAIRSFDITQPYIAALTANVDETSRQACVDAGMDTFLSKPLSRKELL NLLLTFSERARASERG" /product="sensory box sensor histidine kinase/response regulator" /transl_table=11 /EC_number="2.7.3.-" /note="identified by match to putative ortholog SPO0094 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1726404..1726514 /locus_tag="Silicibacter_1599" /translation="MNGLPKGGALSYQSVNNRERATLGYCNARLQSQVED" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1726471..1727760 /locus_tag="Silicibacter_1600" /function="COG: Nicotinic acid phosphoribosyltransferase" /gene="pncB" /transl_table=11 /note="identified by match to putative ortholog SPO0095 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="nicotinate phosphoribosyltransferase" /translation="MDIATRVYNHKWKIDPIVRSLIDTDFYKLLMCQSVFRNKPDTQV TFSLINRSDKVPLARLIDEGELREQLDHIRSLSLSRGESTWLRGNTFYGKRQMFRPDF MEWFENLRLPPYHLERKGDQYELTFEGSWPEVMLWEIPALAVLMELRSRAVLNDMGRF ELQVLYARAMTKVWEKIEQLRQIDGLGIADFGTRRRHSFLWQDWCVQAMMEGLGGSFT GTSNCLIAMRREVEAIGTNAHELPMVYSALAEDDAALARAPYDVLSDWHEEHEGNLRI ILPDTYGTKGFLENAPDWLAGWTGIRIDSGDPAAAAEIAIKWWQDRGEDPTEKRVIFS DGLDVGKIAELHRQFSGRVKASFGWGTLLTNDFRGLVPDDGLAPFSVVCKAVSANGRP TVKLSDNPEKAMGPKDEIARYKRVFGVGTQERIDVIV" /EC_number="2.4.2.11" CDS complement(1727761..1728234) /locus_tag="Silicibacter_1601" /function="COG: Predicted acetyltransferase" /translation="MTVTLSLILPRERGRLATLLAPYFAETAPTAGIDPSERAGQLLH RKDVTAFWIHADASRVGFAIVLNLPDDRREFSEFMILPQHRRKGLGMEAAALILNEFP GFWRMGISHHSKGAAAFWGTRLSLMPNIRGLRDGAPFTPHQVKSFTFEITDPAPE" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1728231..1729841) /locus_tag="Silicibacter_1602" /function="COG: ATPase components of various ABC-type transport systems, contain duplicated ATPase" /translation="MSLLDISNLSLSIGALPILRNVTLSIAAGEILAVTGESGSGKSM TAFSVMRLLPQAAKIDGAIYLEDENLCALSEDEMCQRRGRDIGMVFQEPMTALNPVMT IGAQVMETILLHTDTAEADAKAEAARVLTRVGLPPERFPMDRYPHELSGGQRQRVVIA MAIALRPKLLIADEPTTALDVTTQAQILDLLRDLVREYGMGLLIITHDLAVVADLADR IVVMRKGEVVERGPTLSVLTHQRHPYTRMLFEASAHKVALPAAPEAPAPLLEVRGAVR DYATPRKGWLGKPGTFRAVNDVSFTLHKGERLGLVGESGCGKSTLTRAILGLEGLQGG ELLLNGQPLSQQRSAAQRQAMQVVFQDPYGSFNPRHRVERLVTEPFHLSPDAATGQER RDLVGQVLEDVGLKASDANKYPHQFSGGQRQRIAIARALITRPELIIFDEAVSALDVS VRARILDLIAELCEAYGLTYLFISHDLSVVREVCDRVLVMQKGEIVEEGPVDDVFTAP QHSYTQKLLAAAPVLPDITPTEPVEAPA" /product="oligopeptide ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO1213 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1729838..1730653) /locus_tag="Silicibacter_1603" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /translation="MNRSLFLGGLLSGVMLLLAIVSFVWTPFDHAVMNIPEKLQTPNA THLLGTDHFGRDILSMVMVGARTSLAVALLAVGIGIGLGVPLGLAAAATRGSWLDEII MRGNDLVFAFPSLVIAILITAVFGPSAVNAIIAIGIFNIPVFARVARGGSLSLWAREF IMAARVAGKSRARISAEHILPNIANLLIVQGTIQFSLGILAEAGLSYVGLGAQPPTPS WGRMLAEAQTLVSLAPHLAIVPGCAIIVTVVGLNLLGDGLRDRFDPRLMEGRA" /product="peptide/opine/nickel uptake family ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO0099 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1730650..1731597) /locus_tag="Silicibacter_1604" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /translation="MLHYLAKRLLSLALSLTIASMVIFAVIEVAPGDPASFMLGTGAQ EETVAALRSELGLDQSKVSRYLDWVGGMLTGDFGTSYTYRTPVAKMVAERLWVSLPLA IYALTLSTLIALPAGIYAASRRGKAGDMAVMGATQLGVAVPNFWFAMLLVLVFAINLR WFSAGGFVGWDKGLWAGLHALTLPAIALALPQAAILARVMRSALLEVLGEDFMRSARA KGLSQKQAIRRHGLRNALIPVLTIIGLQFSFLLAGAIIIEQVFYLPGLGRLVFQAISA RDLIVVESVVMLLVFAVILVNFLVDMAYAVVDPRLRRTS" /product="peptide/opine/nickel uptake family ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO0100 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1731732..1733210) /locus_tag="Silicibacter_1605" /function="COG: ABC-type dipeptide transport system, periplasmic component" /translation="MNFKKPILAAVSALALLAGPALAKDTVTYATQLEPPHLDPTGGA AQAIDTVVYLNIFEGLTRFTPDGAVVPLLAKSWEISEDGRTYTFTLQEGVTFHDGSTL DAQDVKFSLDRARAEDSTNAQKALFADIADVTVSDAQTVVVTLSEPNGNFLFNLAWGD AVIVAEESVETLKTAPVGTGPYRFGEWVQGDRVEMVRNPNYWGEIPELTGATIKFISD PTAAFAAMMAEDIDAFDNFPAPENMIQFEADPRFQVIVGSTEGETILSTNNAQAPFDN PKVRQALAHAIDRQAIVDGAMFGYGTPIGTHFAPHNPAYVDLTGQSDFDPDKARALLA EAGLADGFTTTLHLPPPAYARRGGEIVAAQLAQVGITAEIINVEWAQWLETVFKGKTY GLTIVSHTEPMDIGIYGRPDYYFQYDNPEFQGVMSRLNATTDPDQRTALLQDAQRMIA DDYVNGYLFQLAKLGVAKAGLEGIWANAPAAAIEIGALSWAE" /product="peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0101 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1733440..1734282 /locus_tag="Silicibacter_1606" /function="COG: Ketopantoate hydroxymethyltransferase" /gene="panB" /transl_table=11 /note="identified by match to putative ortholog SPO0102 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="3-methyl-2-oxobutanoate hydroxymethyltransferase" /translation="MSASSQKTALTAEDIRAMKGRTPIVSLTAYTTPMAQLMDEHCDF VLVGDSVGMVLHGLPSTLGVTMEMMILHGAAVARGLKRAMMVIDMPFGSYEQSPAQAF ANAARLMAETGAAAVKLEGGEEMADTIRFLVKRGIPVMAHIGLTPQSINTLGGYKVQG RDDAAKPLIADARAVAEAGAFAVVLEKVPASLADQVTEIVDIPTIGIGASAGCDGQVL VVDDMLGFFGAFKPKFVKRYAELGPAAEEAIADYASEVRARRFPSAEHTFADHAPQKA PQQD" /EC_number="2.1.2.11" CDS 1734101..1735138 /locus_tag="Silicibacter_1607" /function="COG: Panthothenate synthetase" /gene="panC" /transl_table=11 /note="identified by match to putative ortholog SPO0103 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="pantoate--beta-alanine ligase" /translation="MTCLAFLAPSSRSSSNATPSLAPPPKKQSQTTPPRSARGVFPVQ NTPLRTTRRKKPLNKTEGLLPMTPPILRRLDDLRALRRDWMKKGDTLGLVPTMGALHA GHLSLVEAAKAACDHVVVTIFVNPKQFNSPEDLANYPRTEHEDAQKLAPYGVDAIYVP DPDQIYPEGYATTVSLTGVTDVMEGPNRPGHFEGVATVVAKLFLQSGADRAFFGEKDY QQLMVVRRMARDLDIPIEVIGCPTVREASGLAMSSRNMRLSAAATKTAGQLNPLMEAA ATRLRAGEDYAPLEAEMRAQLSDLGFAEIEYIDLRCAQDLTSLDRLDRPARMFVAAWL DGVRLIDNIAV" /EC_number="6.3.2.1" CDS 1735245..1736729 /locus_tag="Silicibacter_1608" /function="COG: Glycerol kinase" /gene="glpK" /transl_table=11 /note="identified by match to putative ortholog SPO0104 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="glycerol kinase" /translation="MTYILAIDQGTTSTRAILFDGDMQVAAVAQEEFTQHYPNAGWVE HDPEDLWSTTLATCRKVMADKGISASDIAGIGITNQRETTVVWDKATGRAIHNAIVWQ DRRTAEICEGLRDEGHEDMVRETTGLLLDPYFSGTKVKWILDTVEGARARAEAGDLLF GTIDSFLIWRLTNGQSHVTDATNAARTLMYDIKSGSWSTEICAMLEVPQAMLPDVLDS AADFGTTSPDHFGGAIPILGVAGDQQAATVGQTCFKPGMMKSTYGTGCFALLNTGDTP VLSKNRMLTTIAYQLDGKPTYALEGSIFIAGAAVQWLRDGLGIIGKASESGVLADKAD PTQDVILVPAFTGLGAPYWEPDCRGGMFGLTRNSGPAEFARAALQSVAYQTRDLWEAM RADWEGEANVTLRVDGGMSASDWAMQSLSDTLGAAVDRPVMQETTALGAAWLAGMKAG VYPDQEGFAATWALDREFKPKLDAARREEAYARWKRAVQAVIGV" /EC_number="2.7.1.30" CDS complement(1736823..1738076) /locus_tag="Silicibacter_1609" /function="COG: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases" /translation="MTILIAGGGIAGLALGLTLHQIGVPFKVFEATRRLKPMGVGINL QPNAVRELFDLGLEAELDAIGVRTQQLGFYSKLGNTIWEEPRGLNAGYAWPQFSVHRG ELQMLLYRSLLERAGPEVIETGARAQGWEDTAEGALLHLSDGRSVAGRLVVAADGIHS ALRACQYPDEGAPIWDGRILWRATTRAPVFKGEGAMAMIGHDHLRFVSYPISAPDADG LATLNWIAEKRFDPNQDFQREDWNRAVDINQFVGDFADWRFDWIDVPALIRGAEVVYE YPMVDRDPLPQWSFGHRTLMGDAAHPTYPIGSNGASQAILDARNIGAQILAHGVTTEA LQAYEAEMRPAATKIGLANRSGNGPDAVLQRVEDLCGGAFEEIDAVIARADLAAHAAK YKAISGFSIEALNAQPPTIPAGAQV" /product="monooxygenase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0105 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1738148..1738702) /locus_tag="Silicibacter_1610" /function="COG: NTP pyrophosphohydrolases including oxidative damage repair enzymes" /translation="MTERRPDLIPAWVDGTLTPVDKLRAHQEGMRHKAVSVFVVQGRE ILMQRRAMGKYHTPGLWANTCCTHPQWREASDRCAVRRLREELGLEGLHPEYRHTLEY RADVGGGLIEHEVVDVYLAHMLAPLGLAPNPAEVMETRWVDYHDLLAEVERHPDRFTP WLKIYLADYADVIFGPELIVSAKP" /product="isopentyl-diphosphate delta-isomerase" /transl_table=11 /EC_number="5.3.3.2" /note="identified by match to putative ortholog SPO0131 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1738851..1739318) /locus_tag="Silicibacter_1611" /function="COG: Cytochrome c2" /translation="MKSILSTAIVFALTLPVTAWAEGDPEAGQKAFNKCKSCHQIVSD TGETLSKGGRTGPNLWGIAGRQAGTVEDFRYGDDLVAAGEAGLVWDAETFAAYTADPR GFLREFLEDNKAKSKMAFRLKTGGEDVYAYLAQFGPAPAEAEAEASDNENASD" /product="cytochrome c family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0130 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1740359..1740811) /locus_tag="Silicibacter_1612" /translation="MSALYIDADACPVKAEAERVATRHKWRMFVVSNGGLRPSQNPLV ENVIVDAGADVADMWIAERCGPGDVVVTGDIPLAAKCIEAGARVLRHNGERFTEANIG QQLAMRDLMADLRAANPLGMQGGGKGFSKADRSRFLDALEREIRAAKG" /product="YaiI/YqxD family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3827 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1740808..1742313) /locus_tag="Silicibacter_1613" /function="COG: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes" /gene="sthA" /transl_table=11 /note="identified by match to putative ortholog SPO3828 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="soluble pyridine nucleotide transhydrogenase" /translation="MTETTPQYDYDLIVIGSGPSGRTAAIQAAKLKRRVLVIDRKDRL GGVSVHTGTVPSKTLRETVLNLTGWRERSFYGRAYRVKDQIKAEDLKARLHMTLDHEV DVLEHQFNRNHVDMLAGMAHFTGPNEVEVEVEAGDTTRVTGEKFLIATGTRTYRPDSV PFNGTTVVDGDEFLEMAEIPRSLIVVGAGVIGVEYATMFSALDVRVTLIEPRDTFLDF IDRTLIQEFTHQIRENGVDLRLGSAIESIEDEGSHIEVTLENGRHVRGEMLLFAAGRM GNTDRLNLKAVGLETDHRGRLEVERKTYQTKVSHIYATGDVIGHPSLASTSLQQGRVA ACHAMDVPTVPESPWFPYGIYSVPEMSTCGMSEEELKERGVPYEVGIARFRETSRGHI MGLEHGMLKMLFSLKTRRVLGVQIVGEGATELIHIAQAVLNLKGTVDYFVQNTFNYPT LAEAYKIAGLDAFNRMPIPDEYKDLRAPSKAKKAPAKKTETKSAAKDKAPE" /EC_number="1.6.1.1" CDS complement(1742318..1743163) /locus_tag="Silicibacter_1614" /function="COG: Predicted esterase" /translation="MEPSLETVSENRAFGGVQGVYRHKSSSTNCEMTFGLFLPEEAKD GPVPVLWYLSGLTCTHENAMTKASAQAWCAEQGIAIVFPDTSPRGEGVANDEAYDLGQ GAGFYVNATQDPWKPHFQMWDYVAEELPALLGANFNLDMSRQAITGHSMGGHGALTLA MNLPGRFRSVSAFAPICNPTNSDWGRKQLLAYLGDDETAWAKHDATLLMREAGFDGPV LIDTGTADQFGDLLKTESMAEAIATRRQEATLRMQKGYDHSYFFVSTFMEEHVSFHAD ALYRE" /product="S-formylglutathione hydrolase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3829 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1743380..1743721 /locus_tag="Silicibacter_1615" /function="COG: Predicted enzyme of the cupin superfamily" /translation="MTHFERLTPAAATPEEERPAPEKLLAGDPVFTTWNVEEVDGLYC GIWQSTPGKWRISYDEWEYCRILEGRSIITSEDGTEYPLSAGDSFILRPGFKGTWEVL ETTRKDYVIRL" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3326 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1743738..1744661) /locus_tag="Silicibacter_1616" /function="COG: Predicted permeases" /translation="MAEIFFRTLPFFAIIGLGYWAGRTRFFTDEATAYLTKFVFFFPL SAMIFRFAANLSVTEIFDPNLILGYLAGTLGVYLVATVVAVLRRQDMSTAAVEAQCAA IGNVGFLGIPMMVILFGEAAVGPMMLVLAVDLVVFSSLIVVLINAHRGAGLSLGTFKL VGMGLLRNPMILSIVAGLAWSAGEVPIPAPMNDFLAILGGAATPGALFAIGASLASKS AERVEVAGWLSFAKLVLHPLGVAAGVLWLMPVTPFSAAVAISAASLPVAGNVYMLAQH YGVAPQRASAAILISTVVSIVTVPLVIAWVS" /product="malonate transporter, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3843 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1744953..1745603 /locus_tag="Silicibacter_1617" /function="COG: Transcriptional regulator" /translation="MTNQHASAVRRGRKFDQVLDGARKVFLTDGFEGASVDDIAREAG VSKATLYSYFPDKRLLFMEVAHSECARHATQQLDIPAGSSPRQVLTQVARHILRVILS DVGQKIYRICVAETERFPDLGREFFASGPKVERERFKEYLQAATARGELRIEDFDLAA EQWAALLRMDLFPRMIFNLRDSVTDSEINRVAEGAVDMFLACYGVSQAGDAASDRP" /product="transcriptional regulator, TetR family" /transl_table=11 /note="identified by match to putative ortholog SPO3841 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1745600..1745719) /locus_tag="Silicibacter_1618" /translation="MPNANTSPSAEVFDAAEVTPAPWRPTARLSPVSDPSQAR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1745748..1746452 /locus_tag="Silicibacter_1619" /function="COG: Predicted transcriptional regulators" /translation="MVTPRFDIIGQAISDASRTRMLCELMEGRSFTNKELASAAGVTP QTATAHLRLLQDAGLVVAEKRGRCVFHRLAGPEIAQALEQLAAIAPRDSLYRAQKRKA GGLAQVRSCYDHLAGPLAVAMTDALIARGHLREEGGGFHPVAGEIWAALGVCLPEGST RAPFARPCMDWTERRLHIAGGMGRQILTHALEAGWLRRPVNGAERARGLEVTAPGQRA LHTRLGIGADVAGLLC" /product="transcriptional regulator, ArsR family" /transl_table=11 /note="identified by match to putative ortholog SPO3809 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1746503..1746841 /locus_tag="Silicibacter_1620" /translation="MNQQNTGAFPSSPEQVVFHRRELSVIMSLYGRMVAAGEWRDYGL SHLREMAVFSVFRRTAENPLYRIEKRPKLRNRQGQYSVVGMDGQILKRGNDLKTVLRV LERKLIRVVD" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3807 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1748253..1749806 /locus_tag="Silicibacter_1621" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MNIQLPSRNGYGILVEQLDGPVSAYHGNTLLAQSSRAKVMYETR LPPVVYFPKEDLQVDMDQACSKTTFCPFKGTAHYRDLILPGKKELCSAVWSYDETLPE ARQIKGHVGFMPDALDRLDLGNNRLQAPDDGNISGPLVDWLLREAAFLPSPETFTEVL VERLQQQGLPVSRLTILAWALHPRIAGHHYRWEKGGAGVETFSPSYEIHEKPEFKNSP LRHVSKGLGGLRYRLTGNVPSEDFPILRDLREKGMTDYVAMPLPFSDGRINVLTLASD APEGFSTADLGLIFECSAVIARFYEVFMQRENAQAVLETYVGKRSGARVLGGDIRRGD GDEIDAAIMFCDLRGSTQLEETLPRDKYVTLLNEFFETTSGLVHENGGEVLKFIGDAV LAVFPAGQNPAEARAQALKAAQDIVAALAEIAPCPSLPNLECAIGIASGSVLYGNIGS QERLDFTVIGQAANIAARLGDYGKTIGHRIVVSRDILTQTAEAKPLGLVKLHNVSQPV ESFAIAASS" /product="adenylate/guanylate cyclase" /transl_table=11 /note="identified by match to putative ortholog SPO3455 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1749925..1751433) /locus_tag="Silicibacter_1622" /function="COG: NAD-dependent aldehyde dehydrogenases" /translation="MARTADDILKNLGLTAAELSGGSRAVRSPIDGSTLAEVHDTPAG EMPAILDRAQSAFKAWRVVPAPRRGELIRLLGEELRAAKEDLGALVSWEAGKITSEGL GEVQEMIDICDFAVGLSRQLYGLTIASERPGHSMRETWHPAGPVGVISAFNFPVAVWS WNAALAIVCGDPVIWKPSEKTPLTALACTKIFERAVKRFGEDAPEGLLQILIGDAELG KELVASPSVPVISATGSTRMGRAVAPVVAERFGKCILELGGNNAMIVAPSADLEMAVR AIVFSAVGTAGQRCTSLRRLIVHNSIRADLVKRLKAAYAGLPIGDPQAAGTLVGPLVD EAAGDAMISALKAAESEGGTVHGGARVTEGVPAGGVYMAPAIVEMPGQSASVKEETFA PILYVMGYDDFEDAVEMQNDVPQGLSSCVFTLNMREAESFLTAAGSDCGIANVNIGPS GAEIGGAFGGEKETGGGRESGSDAWKSYMRRQTNTVNYSAELPLAQGVKFDI" /product="aldehyde dehydrogenase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0235 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1751442..1752563) /locus_tag="Silicibacter_1623" /function="COG: Saccharopine dehydrogenase and related proteins" /translation="MQWNICVVGAGKIGQAIATFLKTSANYQVTLADHDLNALGAVAE LGVPTRQIDAKDPVSLAKGLQGFDAVISAAPFFLTPMIAEAAKTAGAHYFDLTEDVAA TEAVRKLAEGSETVFMPQSGLAPGFVGIAGASLAAEFDELDSLHMRVGALPKFPTNAL KYNLTWSTDGLINEYCNPCDAIVNGARTKTAPLEDYERLSLDGVEYECFNTSGGLGTL PETLDGKARAVSYRSIRYPGHCDILKMLLHDLGLERRRDLMKEIFESALPRTDQDVVL VYCTARGRINGELREKSLINKSYARQIGGKTWSAIQVTTTAGVLGVVDLVRQGVLPAR GFVSQEQVKLQDFLETEFGQLYRAGDIDHMTDTTKLAAE" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0234 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1752691..1753119) /locus_tag="Silicibacter_1624" /function="COG: Transcriptional regulators" /translation="MDDLDRRIVAALQHNARESTTKLAAKLGVARTTVHERITRLEER GIIAGYTVVLRDPDEGNRVMVVVLLEVQQKETGRIIKRLEAYPEIRQCLSINGEYDLM VSAEAPRIEDLDILVDEVGRIPGVQRTNTLVVFGRRIDRV" /product="transcriptional regulator, AsnC family" /transl_table=11 /note="identified by match to putative ortholog SPO0233 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1753123..1753878) /locus_tag="Silicibacter_1625" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MIILVSPAKKLNEERARGQATTVPRFLDQAAELAGVARTWSEDE IAKLMGISATLAKLNKDRFAAWSGDGQCAAGLMFDGDVYKELEPATFDDVTKDAAQRR LRILSGLYGLLRPTDAIEAYRLEMGRKTPGHPAGTLYGFWGDKIAAAIVEEARELGVG SVLNLASEEYAKAVPPKALGDLTLISPRFEEERGGSRKVIGVAAKRARGAMARWVLEN GITEADDLKGFTVGGYAFDAETSAPQRPIFVRG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0106 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1753980..1756019) /locus_tag="Silicibacter_1626" /function="COG: Superfamily II DNA helicase" /gene="recQ" /transl_table=11 /note="identified by match to putative ortholog SPO0107 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ATP-dependent DNA helicase RecQ" /translation="MHDAIPLLRDIFGFDDFRPGQEEIVEAVSAGENVLAIMPTGGGK SLCYQLPALRRAGITVVISPLIALMRDQVRALQEAGVCAGALTSGNTEEETEAVWNAI EAGELKLLYMAPERLAAGSAMGMLRRIGVSLIAVDEAHCVSQWGHDFRPDYLRIGELR RALDVPLAAFTATADQETQAEIVQKLFDGEAPRAFLRGFDRPNIHLAFAAKDSPRKQI LEFADARRGQSGIVYCGTRAKTEDIARALEASGHVACHYHGGMEAEDRRIVETRFARE DGLIVVATVAFGMGIDKPDIRWVAHADLPKSIEAYYQEIGRAGRDGAPAETMTLFGPE DIRLRRNQIDEGLAPPERRGADHARLNALLGLAEAMSCRRQSLLSYFGENPEPCGHCD LCDTPVETFDGTTAVRKALSAILRTEETYGAGHLIDILIGNANDRVRQKGHDDLSVFA CGREHSKPEWQAIFRQMMGRDLVRPDPERHGALRMTEPALPILRGEDSITLRKDTIKS ATRRPAVKALVSDEDAPLLSALKAKRRALAEAQKVPAYVIFPDRTLIEMAENRPQSLD EMARISGVGAKKLERYGDAFLSVITGEAEALHPARRKLAGRAQGSIYDTLLEVQARLQ RGECGTQKPLTCSASQLAKVAQMRSDDESGMERLLGERRAQRFASAFLEVLRGAG" /EC_number="3.6.1.-" CDS complement(1756148..1756483) /locus_tag="Silicibacter_1627" /function="COG: Predicted integral membrane protein" /translation="MQMITSNAKSDEDLTPMMAIYGPLQLILSVVYFIMIVHIIMSWL INFQVLNLHQQFVAQIWYGINRLLEPIYTPLRRILPNTHPLDLAPLAALLIVISLRAY ILPTLFGYM" /product="Hypothetical protein Atu2659.1/AGR_C_4820." /transl_table=11 /note=", Protein of unknown function YGGT" /note="Conserved hypothetical protein" CDS 1756570..1757148 /locus_tag="Silicibacter_1628" /translation="MYPIVRLLKDAALASRQPRLGPLETHVSRHHCWPWDLDIWLELN NGRTLTLYDLGRTMLTLRTGLAGVLKREGWAVAVAGASVRYRRRIKAMERFEMKSRAI GWDDRFIYVEQGMWKANGECANHALLRTVVTDKNGIVPPERVIKAWGQDIQSPDLPEW VKAWCAAEDLRPWPPMAESSADKGDVALASAS" /product="hypothetical protein" /transl_table=11 /note="Hypothetical protein" CDS 1757199..1758581 /locus_tag="Silicibacter_1629" /function="COG: Permeases of the major facilitator superfamily" /translation="MTEQSLQSIPLRKRIWGWWFFDWASQPYHTLLVTFVFGPFFAAS ATQYFIGTGLEGEAAKAAAQSSWSLCLTITGLIIGLSAPFLGALADIAGRKLPWIIGF SIAYVLGAAGLWFMDPAGSNLWWMLISFGVGFIGAEFALIFVNAQLPSLGSKDEVGAL SGSGFAFGYLGGVVSLFIMLLLFVEQDSGKTLIGLDPILGLDASAREGTRAVGPFVAI WFVAFMIPYFAWVRDPRTPRRGTASLGRAVSMVVASVKGLKHRKSLTSYLVSSMLYRD ALNGLYGFGGVYAGLVLDWSITQIGIFGIIAAISAALFSWAGGLADARFGPKPVIVLA ILVLSLVCLIVVNMTRTEVFGVALAESSGLPDQIFFACGVLIGGFGGILQATSRTLMV RHTTPETATEAFGLYGLSGRATAFVAPALIGLMTTLTGSARLGITPVIALFALGLLLL LWVDGEGDQS" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0123 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1758578..1759501 /locus_tag="Silicibacter_1630" /gene="mepA" /translation="MRLLRHITLAAFVLAACAPAQDSPRPSAAAFANKAASSTVPAKQ LFGAKRGPSAQRPAPLGSYAKGCVAGAAQLPETGPTWQAMRLSRNRNWGHPETIDFIQ DLSRVAARQPGWQGLYVGDISQPRGGPMLSGHRSHQIGLDADIWMLPPDRLDLSREAR ENISSISLRRASGAYVNDNWSAQHHAILKAAASDPRVARIFVFPGAKVKMCDTETGDR SYLRKIRPWWGHHYHFHVRLNCPRGTRGCVEQDPPPRGDGCDDARQWVANILNPPPPK PVDPNAPKPKPRRDYTLSDLPQQCAAVLSSD" /product="murein endopeptidase" /transl_table=11 /EC_number="3.4.99.-" /note="identified by match to putative ortholog SPO0124 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1759474..1760400 /locus_tag="Silicibacter_1631" /function="COG: FOG: WD40 repeat" /translation="MRRRSFIRLASVAIGLLVALCAAALAASTVWSVTHADSNSARLV SSYRWHEDAPWFGGMSGLELSEDGTRFVAITDRSHLVKGEIIRQDGDITGLRMTEQHR LRNAGGARMPEDVEDSEGLVVQGAQMFVSFESPHRVLEYNATEVRQLPSPRGFRRFSF NASFEALAQSPEGDLVLIAESPPRNKNVSRVWRWSGAEGWQGLGPYPEADGFLPVGAD FGPDGALYVLERKFAKIGFRSRLRRFDLTAKGLGGGEILLNTPLARHDNLEGLSIWRT PSGNLRATMISDDNFFWVQRTELVEYDLPARP" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0125 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1760555..1761187 /locus_tag="Silicibacter_1632" /function="COG: Uncharacterized conserved protein" /translation="MTRTYLPGVLAMAAVVVASNILVQFLFGNWLTWGAFTYPIAFLV TDVTNRVYGAGPARKVVLAGFVVGVICSLIGTQIMGEFGPLVTLRIAVASGLAFLLAQ LTDVAIFASLRGGKWWRAPLASTLIGSSLDTAIFFTIAFSGALTFLEPANDVSWAGEM LPLLGAGPVAPLWVSLAVADWLVKLSLALIALIPFRLIVARLTQGQPSKA" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0126 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1761543..1762223 /locus_tag="Silicibacter_1633" /function="COG: Protein chain release factor B" /translation="MGLSRPCDAGGGSPARDTRAHPASCAQSPCSRAAPCLATPRHPR MAVKCARSAIQVPTFARHALGNAACLRSQNRFPLLRDMLYGPPMLRINDDITLQDWEL TESFMRASGPGGQNVNKVSSAVELRFEAERSPHLPGPVKTRLRRIAGRRWTNDGALIL QCDETRSQARNREIIRERLAELIRRALIKPKRRIATKPTRGSVERRLKAKKTRAEVKS LRGRVDGD" /product="peptidyl-tRNA hydrolase domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO0127 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1762364..1763386 /locus_tag="Silicibacter_1634" /function="COG: L-aminopeptidase/D-esterase" /translation="MKPGPRNLITDVTGLRVGNAADARLKSGTTVLTADQPFTAAVHV MGGAPGTRETDLLAPDKTVPAVDALVLSGGSAYGLDACSGVVDGLRAMGRGFRLGPAI VPICPGAIIFDLLNGGDKDWRDNPYPALGRAALRDASAEFALGTVGAGTGALTGMQKG GLGSASLVLENGLTVGALVVVNPIGSVTTPGERHFWAAPFEIDGEFGGLGPDPSAGIG RSLRSRKMEAMAELAGAAVSSEGSNTTIAIVATDAALTKAEATRMATTAHDGMARAIL PSHGPHDGDLVFAAATGAQSMTDPAADMLALCHAGSLCLARAIARAVHAATPAEGDIL PCWSDS" /product="peptidase, T4 family" /transl_table=11 /note="identified by match to putative ortholog SPO0129 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1763899..1764861 /locus_tag="Silicibacter_1635" /function="COG: Permeases of the drug/metabolite transporter (DMT) superfamily" /translation="MSATVVQSNVLGILAAIGAAVAFSVIDVTFKFLSDGYPLYQVVF IRSVVALVLLLAVIIPLEGGVKILRTQNIRLHGLRVTAVVFANITFFSGLAVLPLAEA VAIAFATPLIVTLLSVLFLKERVGPWRWGAVMVGFSGILVIVKPGMAAFQPYALLPFL GSCGYATLHILTRRAGGSDKAATLSFYPTLGFLIVSALAGLVFGHGQWATGVPLWDVV LKPWAWPKGIEWVIFAVAGVSGAVGGYLVGQAYRLCEAGLVAPFEYVAMPLAVVWGVL VFAEWPEPSVWLGSALIIGAGLVSLWRETRTPGPPPRPRPRSSG" /product="integral membrane protein" /transl_table=11 /note="identified by match to putative ortholog SPO3643 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1764877..1765497 /locus_tag="Silicibacter_1636" /function="COG: Predicted phosphatase/phosphohexomutase" /translation="MPITAVVFDIGRVLIEWEPERFFDRLIGEPRRHALFQEVDLHGA NLDVDRGYPFRETIYGLADKHPDWAAEIRHWHDSWIEMASPEIPHSVRLLRALKAKGV PVYALTNFGAETFVIAQTHYPFLREFDQAFVSAHLRCIKPDAEIYAHLEAGTGRRPDE LLFTDDRPENVTAAAVRGWHTHLFDRPETWAARLVDEGLLTQEEAQ" /product="HAD-superfamily hydrolase, subfamily IA, variant 1 family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3822 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1765494..1766411 /locus_tag="Silicibacter_1637" /function="COG: Predicted ornithine cyclodeaminase, mu-crystallin homolog" /translation="MSLTQIGFDEGEALLEWVALTDALAEGHRRPKAEVGDTFLYRGK DTLLSRSAWIDGLGIAVKTAMIFPDNPTREVPMINGAVSLFDDATGQPEALVDFHLVT KWKTAGDSLLGARRLAHPNAKEILIVGAGTVAASLIEAFSAVWGDAQIRVWNRTIAKA EMLATAYPGVAVAPDLEQAVTAADIILTSTMSTDPVIQGAWLRPGQHLNMIGAYRPDM READDLALSRARIYCDSFDTTLDHIGEFKIPLASGAMQRADVLADFYALDRFGRFDPE AITLFKNGGGAHLDLMTSRHVLDLWTQQT" /product="ornithine cyclodeaminase/mu-crystallin family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3821 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1766408..1767340 /locus_tag="Silicibacter_1638" /function="COG: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /translation="MIWFLSAVLCLGALLFLPALQETLRRPLTESMRRNAPGKFAELS QGQTHYRWIGPLRGPVVVCVHGITTPSESFLPLAQELAEMGYRVLLYDLYGRGYSDYV PGLQDRAFLLQQLDDLLAYEGIVEDFVLVGHSAGGAIATAFAAANIWRVRSLILVTTV GLHKPRTPMAEFRKHAHGIQDLILRWSYPIVARRYVKGVFSDPRTPDAVRQAQQAQLS RRGYMPSNLAAIRGILRDDFAEEQKLFNRQGLPVLAIWARDDVIIPPQTSGRLAELNR SAKQEVVEDAGHEVVYTHAGDVARLIAENQRRGL" /product="Lipase 1 precursor" /transl_table=11 /EC_number="3.1.1.3" /note=", Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)., Alpha/beta hydrolase fold, alpha/beta hydrolase fold" /note="High confidence in function and specificity" CDS complement(1767343..1768581) /locus_tag="Silicibacter_1639" /function="COG: Sugar phosphate permease" /translation="MDRSTPLFTPVLLVGCLIIMVSFAVRASFGVFQIPIADDFGWLR SEFSLAIAIQNLAWGIGQPIFGAIAEKIGDRKAIIIGAVVYAAGLVLSAGATTPFEMQ AYEWLVGFGVAGTGFGVVLAVVGRASSDENRSMSLAIVTAAGSAGQIFGAPTAEYMLG LMSWQSVFLVFAGVVLALILSLPLMRAPVSAGKAELEESMGAILKKAFRDPSYTLIFL GFFSCGYQLAFVTAHFPAFVTEMCGPIMPGGVLHGMGITTTSALGAVSISLIGLANVA GTLLAGWAGKHYSKKYLLAGIYTARTIVAGAFILLPITPLSVILFSVAMGSLWLATVP LTSGLVAHIYGLRYMGTLYGIVFLSHQIGGFLGVWLGGRMYDIYGDYTMVWWIGVGVG AFSAIVHLPVRERPLQAAAA" /product="transmembrane transporter, major facilitator family" /transl_table=11 /note="identified by match to putative ortholog SPO3820 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1768750..1769814 /locus_tag="Silicibacter_1640" /function="COG: Predicted ATPase" /translation="MTDLYQARVDAGQIQPDPAQQAVLPEFDRIADGLRAEPVKRGLF RKAVRPEVKGLYLWGGVGRGKSMLMDLFVESLDDIPSRRVHFHAFMQEIHAKMHLARE AGTEDALAPVVADVVASVRLLAFDEMQITDITDAMIVGRLFEALFEAGVVVVTTSNRV PDDLYKNGLNRQLFLPFIDLIKDKMQVHEMVSPKDYRQDRLTGSRVYFTPLNAEVRAE MDAIWRDLTGGAAEPLVLMVKGREVTLPAYRNGVGRATFYDLCGTMLGPGDYLAVADA VKVLVLENIPALGRNNFNEAKRFVTLIDALYEARVRLICSAAAEPEFLYMEGDGAFEF ERTASRLREMQDKDWGQPKA" /product="ATPase, AFG1 family" /transl_table=11 /note="identified by match to putative ortholog SPO3819 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1769942..1770703 /locus_tag="Silicibacter_1641" /function="COG: Transcriptional regulators of sugar metabolism" /gene="glpR" /translation="MNATDLSERQRDILRLLEQSGFATIEDLAGRFGVTTQTIRRDVN DLRDRALLMRVHRGVRPHEGARPYASRAVEQQREKAALAREVLRLIPAGASVSIGLGS TPAEVARLLAHAGGRDVITNNLVAASHLWDAEDITLSICGGAVRDRSVSGSAAAEFFA AYRVDFAIFGVAGVDDDGALLDFRTEEARARAAMQTHARQSVLVLDQVKFQRRAPARG GWLHDPDYVVTNAPPPKALAAGLCAGALVLISEAP" /product="Glycerol-3-phosphate regulon repressor." /transl_table=11 /note=", Bacterial regulatory protein, DeoR, Bacterial regulatory proteins, deoR family" /note="Conserved hypothetical protein" CDS complement(1770700..1771971) /locus_tag="Silicibacter_1642" /function="COG: Folylpolyglutamate synthase" /gene="folC" /translation="MTEQTSDAILARMMALHPKIIDLTLDRVWRLLAALENPQDKLPP VIHIAGTNGKGSTQAMIRAGLEGWGKSVHAYTSPHLARFHERIRLAGDLISEAHLTEV LDECYSANGDASITYFEITTVAGLLAFSRTPADYTLLEVGLGGRLDATNVITPEVSVI TPVSIDHEQFLGNTLAKIAGEKAGIIKRGVPVVVGPQAEEAMEVIEDTAMRLGAPLIA YGQHWHVHEERGRLVYQDERGLLDLPLPNLMGAHQIQNAGAALAVLRHLGADEAACEA AVVGAQWPARMQRLKTGPLVEIAGAAELWLDGGHNAAAGIALADVLAKLPKRPTHLIC GMLNTKDVTGYLRPLAAEAQSLTAVSIPGEAATLSAEETKAAASSVDLPATTAESVAE ALTAILARDPDSRVLICGSLYLAGNILRENG" /product="folC bifunctional protein" /transl_table=11 /note="identified by match to putative ortholog SPO3818 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1772126..1773088) /locus_tag="Silicibacter_1643" /function="COG: Acetyl-CoA carboxylase beta subunit" /gene="accD" /transl_table=11 /note="identified by match to putative ortholog SPO3817 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="acetyl-CoA carboxylase, carboxyl transferase, beta subunit" /translation="MNWITNYVRPTINSIFSRREVPENLWKKCDECGTMLFHRELSDN QNVCTNCGHHMHITPRDRFKALFDGGVFAEVKVPEPVVDPLKFRDQKRYPDRLKAAQK TTGEKEAMLVATGEIGRTPIVAAAQDFSFMAGSMGMYVGNAIIAAAEEAVKLGRPLVL FSAAGGARMQEGILSLMQMPRTTVAVEMLKEAGLPYIVVLTHPTTGGVTASYAMLGDV HISEPNALICFAGPRVIEQTIREKLPEGFQRAEYLLDHGMLDRVTPRTKLREELITII RMMMKLPPQVHGDLPAPAPEAQLEAPQKDEKAPAEDASGADKSA" /EC_number="6.4.1.2" CDS complement(1773151..1774035) /locus_tag="Silicibacter_1644" /function="COG: Predicted metal-dependent membrane protease" /translation="MRCYRPHEILLHQARPTAEVWRLALGMVLVVLTWFGLGLISDLV LLPGVLALTGEADLAGGSDPAGMAILLGHFIFMIIAVGLVLQMLHGRSLGGLLGPRAL VIPQGARVLRMLVILLVVLMLLPPYDMGAPLEPNLAFGPWLALLPVSLVLVLIQVSAE EILFRGYLQQGLAARFSSPLVWLVLPSLLFGMGHYMPEAAGENAWLIVAGATLYGMLM ADLTARAGSLGPAIAVHFVNNVWALLFVASPSNLSGLALYLHPYAMDDPLALRPWLWV DLMVMLVTWLAARLAIRA" /product="CAAX amino terminal protease family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3816 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1774161..1777214) /locus_tag="Silicibacter_1645" /function="COG: ABC-type multidrug transport system, ATPase and permease components" /translation="MEPSLFSFIWRYSKRQQFGLLLLTLMTFPFLYATLELPKRIIND AIGAPSAWIDLWGWRLSAQQYLLVLCFAFLGAVLASGMMKMRLNTLKGILSERLLRRL RYQMIARMMRFPTNHFRTTSQGEMVSLITSESEPMGGLMGDAVAQPVFQAGQMLTIVS FLFIQSVWFGLASVALIPLQAWLIPMLQRQINLLNKDRIAEVRALSAEIGETAAGLQD LRSNGGWRYRLAQVSDRLGRLFEIRRRIYMKKFFMKFLNNLIGHLTPFFFYSVGGVLA LRGEITVGALVAALAAYKDLSAPWKELLTYYNQVQDMSLRWQIMTEKFSPPGMIDPAL FEGVPQKVPHLRGDIELRDVTVRDAEGKPVLDGLTLTIPAGAQVAIQSSSAAERQALA QLLTREVLPTRGEVIVAGHPLAELHQGVIASRIGYAFNAPYLFDGTLGDNVLMPLRNQ PRATAAERQLLQRAEALKAGNSGDPVNADWVNPDLAGLRSEHDLRDWWFQLVEAMGID GQLFHRTLHARLQDRHRALEAQITALRPRIAERLEAQGLRDVVYRFLPDLYNPALPLA ENMMFAFPVEPVPPTLFTDPDGPFQRVLRAEGLESQTRDISLALIDTLQRTFGRGQTS HPLFRRLNLDEELYARIVKAADRYREGRVLDGTDRALLCTLPFLLTEEQLGAGLPRDY KLRILGIRNRRGDLLLADCGGVYRRLRAGEYARKLTVLENALFGRISIHAGGKAQAVE DVVADVMADNDLKARLALMIYDLPTGLGGALLEPVFRERAAFTRAAIKRPDILILDHV LASHDSDNRLKTRNRLQALLPKTTMIHLEDHFEHPSRYDLHLTLRDGRIDGQSGVATV LLDAPEEAEDDFDRKLSEIGSADLFARLDARHRRLLAFSASWVRVPTGAAVFRAGEAG DAVYLCLSGQAELQFPEDGSALDMIAPGRLIGDLAVITAAPRQLDLFAVEDCVFLRIG AEEFRTVIESDITVALHLLQTVSGHLSSAAVALQDARSAQGSAEP" /product="ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO3815 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1777571..1778350 /locus_tag="Silicibacter_1646" /translation="MNQTLINILGASRALLLKALRLPRLGLLLLVPLALAGCMEGNRL AFAPPGESVSRPVDSRGRSLTAVFGDGQLILAAPSGFCFDAEMEQHTGSGGFALLARC EKMGTFGRLRGKDGAMLTATVGAVSADTPAPSTEALRSAFTEARSAARVLETRGDGDI PLIKLHMASHSAKGASGTHWRGAFLVHGHLVSVALYAPEGSGYLGERGARLIREFVQA TRNATLLAETAAPTETAPQRTLRPQDRSGAVLAQAAAAPQE" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1778566..1779327 /locus_tag="Silicibacter_1647" /translation="MGKLLERVLNTGALRRWRRAARAAPSTPLARLRQQRNDARKLRM HLDQLIHTADNRLALPKIDSSYFPRPHGTDWSWRPELWRGPLPVAGVSSVPSKTRLGH EIQMFHDCAISELTLRQLRNTREEDLAPYGLRMDVFKFDGSFLSLVIDLPAEATQGLT RQHLVRLDCIAESEKPIEIFARLNIKHGPNTEQLVRELPPGEKTFSVEYDLAYSRLNE KRIEKAWIDLIFEAPDMNQVVLRDLTFARFLRANL" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3814 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1779363..1779740 /locus_tag="Silicibacter_1648" /translation="MSAMTLQKIRFRSGLWEGRIETAPRADARPQIVVRYLDREVGGV TLEAAEAPGSWALTIPVPSEAIGDGVQSFVIIDAETDTKIGDFTLIAGEPLADDLRAE VELLRAELDMLKRAFRRHCLETT" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3813 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1779936..1781000) /locus_tag="Silicibacter_1649" /function="COG: Adenosine deaminase" /translation="MMMFDLPDSKTLYDALVARDASYDGRAYVGVSSTGIFCRLTCPA RKPKYENCQFFATPGACIEAGFRACKRCHPLNAAAGNDPLVRRLLEALEARPFYRWRE EDLVAMGADPSTIRRAFKRQFGMTFLEMARQRRLREGFTTLSAGQPVISAQLEAGFES PSAFRAAFARLVGIAPGQFRKDAQLLADWIETPLGAMVAVACQHKLHLLEFADRKALP REVAKLQKRQPGGIGFGRPEVVDQAAEELGAYFTGRAARFDTPLAYHGTAFEADVWRA LREIPVGQTRSYGALAQSLGRPGSSRAVARANGANQIAVMIPCHRVLGADGALTGYGG GLWRKQRLIEIERDLSAATG" /product="ADA regulatory protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3311 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" tRNA complement(1781173..1781247) /locus_tag="Silicibacter_16" /gene="Silicibacter_16" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS complement(1781315..1782271) /locus_tag="Silicibacter_1650" /function="COG: ABC-type oligopeptide transport system, ATPase component" /translation="MSAALKLTNLSKTFPVGKRLFGGAKAGVKAVQPLSLTVEQGETL GIVGESGCGKSTLARMLVGLLPPTTGQIELEGAPLDNADPATFGQKIQYVFQDPISSL NPRKTIRQVMDAPLRHLHGMDAKARAARIAEIFAAVNLREEFLDRYPHEFSGGQAQRI GIARALAADARILILDEPVSALDVSVQAQVLNLLADLKRTFGLTYIFISHDLAVVEAV SDRVAVLYFGSVVEVGPANEVFAAPRHPYTRLLAQSAPVVGRALAAPEAKETELPDPL NPPKGCAFAARCALASDLCQSTAPTLEPQSDRVAVACHHPID" /product="peptide/opine/nickel uptake family ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO2551 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1782268..1784151) /locus_tag="Silicibacter_1651" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component" /translation="MSFLRLLSRNRLALAGLIVMSVVLLLAVLTPILPLPDPDVTNTA ERFKKPFSEGALLGTDHLGRDLASRLMWGTRLSLAVGFAAAVAAATIGAAIGVIAGFY GGRVDNVIMRGVDMLMGFPYILLALAIVAALGPGLMNALIAVAAVNIPFFARNIRGVT VGIAHKEFIDAARLCGMSNARIIITEVVPNVIPVIVIAMSTTVGWMILETAGLSFLGL GSQPPQADLGSMLGEARSALITNPHTSVVPGAMILVIVMAINLLGDGVRDALDPRLKS GALSRPMPTTMVRRTDPVPQPEGDGILSLCNLQTQFHIKDRIYKAVGGVDLSVRPGEC LGIIGESGSGKSVTALSIMGLVASPPGVITGGAVHYKGEDLIGAPYETLRRLRGDRVA YIFQDPLATLHPLYTVGAQLIEAIQSHHRTSTSEARARAIELLKSVRIPNAEARVDNY PHEMSGGMRQRVGIAMALANDPEVIIADEPTTALDVTVQAQILALLDDLRRERGLAII FITHDFGVVAQLCDRVAVMYAGRIVEEGPTDAILNAPAHPYTARLMACVPELGQGRRE LAAIPGLPPVVDKLPAGCAFADRCPKAAKACRSGDIALDGFGAGRKIRCIDPEIPVQE ATA" /product="peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO2552 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1784148..1785095) /locus_tag="Silicibacter_1652" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /translation="MTGYILKRLISAVPVLLGISVIVFLIMAMIPGDPATAILGSYAT PENVEKLNRDLGLDKPLVQRYFIWLGNMLQGDFGRSFSLNRAVLDEVLERFNATLVLA GTSFVICSILGVAAGVVSAARQYGLADKAITFAVLLGISIPSFFLGMMMILIFAVNLR WFPVSGMWPIYGARDLSALVSHLTLPAIALAVVATGVIARLSRSAMLEVLRQDFIRTA RAKGVHERSVIWRHGLRAAMVSIIPVLGIQAGFVLSGAVYIEMVFQWPGVGRMLVDAI LKRDILLVQGGVVFVAACYVLFNIAVDVAQSLLDPRIKA" /product="peptide/opine/nickel uptake family ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO2553 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1785213..1786799) /locus_tag="Silicibacter_1653" /function="COG: ABC-type oligopeptide transport system, periplasmic component" /translation="MKLLGMTRRGAMAAMLATTAMAGVAMGVAPAAAQTPPGVLIVGQ IAEPKALDPAAVTAVNDFRILMNVYDGLVRYKDGTLEVEPALATDWSISEDGTEYTFT LREGVSFHDGSAFDAEAVVFNFERMLNEDHPYHNTGPFPLAFFFSAVESVEAVDDLTV KFKLNAPYAPFLSNLAYPTGLIVSPEAVKTHGAEFGRNPSGTGAFKFAEWRSNEAVVV EKNPDYWDGAAELDAVVFRPITDANTRTAEMLAGGIDLMVEVPPVALSEFQGDAFTVH EQAGPHVWFLILNAKEGPFADKRVRQAANYAINKSAIVNDVLEGTAEVAAGPTPPAFA WAYNETLEPYPYDPDKARELLAEAGAEGAELTFYVTEGGSGMLDPIAMGTAIQADLNA VGLDVKIETYEWNTFLGEVNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKGGF NSGYYSNPKVDELLEAARVATDQDERAKLYQEMQTIVQEDAPWVFVANWKQNAVTSDR VGDFALQPSFFLLLDDVTKN" /product="peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO2554 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1786907..1787581 /locus_tag="Silicibacter_1654" /function="COG: Uncharacterized conserved protein" /translation="MTFSILMYDRETGCYAAAAATGSLCVGGWVLRGDIESGLVASQG TAPSTFWRDDVLRRMYDGALAHAAVDQVTGGDAGRGHRQLLALDRKGGTAGFTGAQSV GYADHIAEQDLAIAGNMLAGRQVLTAMRETARGEFATPSDRMLAVLDAAAAAGGDARG LLSAALLVLSPDRPPLDLRIDHSDDPLPALRALCLRAHRAPYYDWLTEVPVLKDRHRA VLPDAS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2555 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1787588..1788427) /locus_tag="Silicibacter_1655" /function="COG: Transcriptional regulators" /translation="MMNRGLYPCRFPVYVFIMIKERQVMSNKSRTPEQPKRSRPVRVA EEIKTWVVERDLQQGDKLPNETEMIAQFGVSKGTVREAMRILEAQGLIITRTGPGGGS FVDKVSAERARSLLANYFYFQNLSIADIYQMRRALEPELAASLAGQLDEAQLGEMESL AARYPEPAQSAEEEKEQHIASLEFHARLAEFSGNALLGFVISFMARVLTDMTIYRKLY DPPNLELWRRGRAHQMQLVQALRDGDAAAARRIMASHMQGAEEQMRSQEAQLARRFIG EQR" /product="transcriptional regulator, GntR family" /transl_table=11 /note="identified by match to putative ortholog SPO2550 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1788449..1789669 /locus_tag="Silicibacter_1656" /function="COG: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases" /translation="MDWGQEAQQRLAKIAACSAAGPGVTRLPYTPEHSAALEQISDWM RRAGLHPQLDAAATLVGRSSAPSNEAAVLIGSHQDSVIEGGRYDGIMGIVIGCLALER LASEGTRLPFPVEVLAFADEEGVRFPTALVGSRALAGRFDPSVLDMRDGEGVTLRTAL SEFGGRPDKIASEARNKNAVRAYLELHIEQGPMLEQDNAAVGIVTGICGIERNSVSFV GETGHAGTVPMQGRRDALVAASEFVVKIHDAARNIDGLRATIGTLALKPAAVNAIPRE AALTLEIRALSDAARQEFAGAAQVIGTEIAAKRDVSFDMAKTYEQLAVPCASGLIETL ELAARDAGQHAPLLPSGATHDASAMADLCDISMLFLRCKDGFSHRPEEYTSAEDMAAA IDVTCAFLRRLAAE" /product="N-carbamyl-L-amino acid amidohydrolase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2556 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1789686..1791989) /locus_tag="Silicibacter_1657" /function="COG: RTX toxins and related Ca2+-binding proteins" /translation="MLHSARKRQHRPGCSVLAVKALPVSIGKWYECKHEMTTYVVHGT NYNDPSFWASISEGSPGHTLDFTGLPPNYEININAEAKTISIWDGTSWYSVGESGNTG TNATLGSPTLVDDFTVILANNSDDYIEGSDNNDSLTGGTGNDTLSGDQGDDTLRGGDG DDYLTGGEGNDNIDGGTGNDTIRGDNAWTNTSSGASGASTTPTTLTVTNSADGPIELW WIDETGTAQYYATLQPGDTRNQSTFEEHNWILRHPDGWYLEYIEGAPNQTVNFGSAGL NDTVYAGAGNDLIDGMYGDDLLYGEGNNDTIYGDYGSDTIYGGAGDDLLYGGDGDDTL AGGTGSDTMYGGAGNDSMVGFDDADTFILEDGFGNDTIVGGEGGTDDDFVDLSNLTSG VTVTYTGDEAGTITDGSNTAEFSEIERIRLTDQADVLDASASLVGVDVDAGAGADTLT GSAGDDSLTGGTGDDRFVMTTSGGTDTVGDFDLGDADLDGFYNDQIDVSGLSGGSGAG GLVTRADVVVTDDGSGNALLTFPNGEQLVLQGVAPAQISSYQQLYAAGIPCFTPGIRI ATARGAVPVEHIRKGDLLQTADNGFQPVIWTGRRDLSAAELRARPHLTPLRLRPGGPL ANDRPLLVSPQHRFMLGRARLGDMDHLHEAFVRTRLLQSLAPEDVTPCRPAAGVSYIH LMTEAHQVIFAEGVATETFWPGPEALRGLSEGDRRELFDLFPELFLAGGLCGGTGRHF VARAYCPLARVDLKRRDLRALGARSAA" /product="Iron-regulated protein frpC." /transl_table=11 /note=", Serralysin-like metalloprotease, C-terminal" /note="Conserved hypothetical protein" CDS complement(1792157..1793530) /locus_tag="Silicibacter_1658" /function="COG: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase" /translation="MLKNDQLDQWDRDNFFHPSTHLAQHARGESANRVIKTASGVFIE DRDGTKLLDAFAGLYCVNVGYGRQEIAEAIADQARELAYYHSYVGHGTEASITLAKMI LDRAPKNMSKVYFGLGGSDANETNVKLIWYYNNILGRPEKKKIISRWRGYHGSGLVTG SLTGLELFHKKFDLPVEQVIHTEAPYYFRREDLNQTEEQFVAHCVAELEALIEREGAD TIAAFIGEPILGTGGIVPPPAGYWEAIQTVLNKHDILLVADEVVTGFGRLGTMFGSDH YGLEPDIITIAKGLTSAYAPLSGSIVSDKVWKVLEQGTDENGPIGHGWTYSAHPIGAA AGVANLKLLDELNLVSNAGEVGAYLNATMAEALSQHANVGDVRGEGLLCAVEFVKDRD SRTFFDAADKIGPQISAKLLEQDKIIARAMPQGDILGFAPPFCLTRAEADQVVEGTLR AVKAVLG" /product="aminotransferase, class III" /transl_table=11 /note="identified by match to putative ortholog SPO1136 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1793594..1795069) /locus_tag="Silicibacter_1659" /function="COG: NAD-dependent aldehyde dehydrogenases" /gene="gabD-1" /transl_table=11 /note="identified by match to putative ortholog SPO1137 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="succinate-semialdehyde dehydrogenase" /translation="MSLSALSARAEISDKALVRSFSYINGKWCASSNGEVVAVHDPAT GDFIGDVTAMTAEDSSAAVDAAHAAFTSWALMLPQDRCALLRRWFELMIEHKEDLARL MVLEQGKPLSEARGEIDYGAAFVEFYAEESKRPNIEGVTSHLPDAEVELWREPVGVAA LITPWNFPSAMLTRKAAAALAAGCTVVAHPSAETPFSALALAELAERAGIPKGVFNVI TGKAPVVVEPWTRDARVRALSFTGSTEVGKLLYRQSAETVKRLVMELGGHAPVIVFKN CDLDRAVAETIKAKFATSGQDCLGANRIFVERDIYDEFCTRFVAATQALSVGKGIDDP DIGPLMNEKAVQKQEEHVADALEKGATLACGGKRHALGPLFYEPTVLTDVPADALILH EETFGPVAPITPFDSEDEVIQRANDSEYGLVAYVHSHDPRRIYRLSRALQFGMVAVNR TKVTGAPIPFGGTKQSGMGREGARLGMEEFTEVKYVCRDWA" /EC_number="1.2.1.16" CDS complement(1795153..1795632) /locus_tag="Silicibacter_1660" /function="COG: Transcriptional regulators" /translation="MHLDQRDLDILRILSRDGRITKAALADQVGLSPTPCWERLKKLE KAGLIEGYNAQINLKKIAPHVTVFVAAELADHTAASFQSFEAAMQRYDEVVACWALGG GFDYLLQIVTCDIDAYQRLIDAMLDARIGLSRYFTYIVTKPVKGAGVPPLEILLRGS" /product="transcriptional regulator, AsnC family" /transl_table=11 /note="identified by match to putative ortholog SPO1138 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1795634..1796626) /locus_tag="Silicibacter_1661" /function="COG: Predicted deacylase" /translation="MKDNPISPTIPLDQDGVHHGFLKLPYSRDDSAWGSVMIPITVIQ NGAGKTALLTGANHGDEYEGPVALQELAATTRAEDVTGRLIIVPYFNYPAFRASARTS PIDRGNLNRAFPGRPDGTVTQKIADYFQRTLLPMADVAVDFHSGGKTLDFVPFAAAHI LEDKVLQDACFAAMQAFNAPYSVQLLEIDSEGMYDTAVEEMGKVLVTTELGGGGMSTA RSNAIAKKGLRNVLIHFGILQGEMQIDPSVTLDMPDGDCYLFSEHDGLFEIMIDLGEP VQEGDLVARVWSPDRTGEAPVEYRARRSGVLISRHFPGMIKSGDCAAVIGVVEG" /product="succinylglutamate desuccinylase/aspartoacylase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1139 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1796762..1797772) /locus_tag="Silicibacter_1662" /function="COG: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain" /translation="MDRNPASPAASDHSDDTPRLAVEIFVQPGFSQLELSLILAVFEA ANAMETGIWFSVRITSDSPGVVTGGAGMMVRAEPAIGLQYLQDLMFVVGGRNCSGGSW LARARAMQKLRRPVFLLSDAATAYIRRCAPLSGPATTHWQDLRALRETGEYPTLTDSL VAENAGILTSAGGGYTAEMVVRHLSQILAPQHCAELASVLMIETARGYSGEQPKGAAR NTNLLEARLVRAMAIMEECIEYPLSTAEVAERAGISVRHLERLFLTHLNTTPAKHYMQ LRLKLANKLITDTNLPIAEIAFASGFASSTSLSRAYRREYNMTPYQVRARDRAGAGLR AD" /product="transcriptional regulator, AraC family" /transl_table=11 /note=", Helix-turn-helix, AraC type" /note="Hypothetical protein" CDS 1797985..1798653 /locus_tag="Silicibacter_1664" /translation="MQGRALGDWRNLATGQQAYWHTRLFDRMLRRITNVTTTPECPLQ TIARTLRLNPILSGLLLISALALSACGEGPRSGNDQIDPARLAFAMREAESLRSRGAR VWCVPFARNLSGVEIRGNARTWWKQAQGRFEVGKTPEVGAVMAFSATRSMPLGHVAVV SEVVDDRTLRIDHANWHRNKVSLGMAVIDVSDRNDWSRVRVETNPGAFGSVYPINGFI HPNS" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", CHAP" /note="Hypothetical protein" CDS complement(1797904..1798032) /locus_tag="Silicibacter_1663" /translation="MPGGKISPITQGAPLHFGPDFPVRPCARRRDAAANRARVDGF" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1798769..1799671) /locus_tag="Silicibacter_1665" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MKTLLMSTALMAATSTVAVAETPKFMASADPLAIQASEFIGQQI YTTPSEVDAEGYEGLQQEWQKIGEVNDIVLSRDGNIQSVLVDIGGFLGIGERQIAVDM NVLQMVPDSATPEDSTDYFLVMQADVAEFETAPAYEHSGMSDFSDRAEQAVKTTSAAL KNTADDLGNTAQGVAERVGEAISNTMDDVKEITAEVTSDWQDKGYEPIEGANLSAERL TGTPAYGIKDDWIGEVSDLVMSESGDISHAIIDVGGFLGIGETPVKLELSQVTVLQEV GGDALRVYVPMSSDKLKGIGAYES" /product="unknown protein" /transl_table=11 /note=", Photosynthetic reaction centre, H-chain, cytoplasmic" /note="Hypothetical protein" CDS complement(1799794..1800636) /locus_tag="Silicibacter_1666" /function="COG: Transcriptional regulator" /translation="MDSQENASRATRRARGRPRDWHDKTAQNTIKSLDRAMEVFEYLS QAQGKPLTMIAEEMGQSPATVYRILVTLEGRGLVDFDAEEQLWHIGAQAFVIGARFLR RTSLVDRARPILRRLMEDTGETANLGVEKEGHVLFLSQVETHASIRAFFPPGTLSQMH ASGIGKALLAEMDGSRLDRLLAATRLEIFTDHTITDPEALKADLAAIRAQGFAVDNEE KNAGMRCIAAPVFDMNREAIAGISVSGPTSRISVESIAELSRPVIEAAQQLTVAIGGD PAAL" /product="transcriptional regulator, IclR family" /transl_table=11 /note="identified by match to putative ortholog SPOA0143 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1800804..1801994 /locus_tag="Silicibacter_1667" /function="COG: Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase" /translation="MSFQNPVFIPGPTNIPESLRKACDMPTIDHRSPLFGQILHPARE GVRKVLKSDSAEVFIFPSSGTGGWETALSNTLSPGDTVLAARNGMFSHRWIDMCQRHG LEVEIIETPWGEGLPADRYEEILTADTSHKIKAVLATHNETATGVKSDIAALRRALDA AAHPALLFVDGVSSIASMDFRMDEWGVDVAVTGSQKGFMLSAGLAIVGFSAKAMDATQ SARLPRTFFDVHDMAKGYANNAYPYTPAVGLMNGLNESCKMLLAEGLEDVFARHHRIA EGVRAAVGAWGLELCAATPEVYSDTVSAIRTPEGFNATDIVTHAAEKYGVAFGVGLGE VAGKVFRIGHLGSLTDVMALSGIATAEMCMVDLGLDIRLGSGVAAAQDYYRGHTAAAQ KDAA" /product="serine--glyoxylate transaminase, putative" /transl_table=11 /note="identified by match to putative ortholog SPOA0144 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1801994..1802959 /locus_tag="Silicibacter_1668" /function="COG: Threonine dehydratase" /translation="MKDTAMYIPTYEDMLAAHQRIAPHIHRTPVRQSAYLNELTGAQL FFKCENFQEPGAFKVRGATNAVFGLDAAQAAKGVATHSSGNHASCLSYAAMLRGIPCN VVMPRTAPQAKKDTVRRYGGKITECEPSTTSREETFARVQAETGGDFVHPYNDPRVIA GQGTCAKEFVEQTDGLDCVLAPIGGGGMISGTCLTLSTLAPETRIIAAEPEQADDAYR SFKAGYIIADDAPRTIADGLLVPLKDLTWHFVSNHVSDILTASDPEIIDAMKLIWKHL RVVMEPSSAVPLATILKNPETFRGKRVGIVLTGGNVDLDRLPWTI" /product="pyridoxal-phosphate dependent enzyme" /transl_table=11 /note="identified by match to putative ortholog SPOA0145 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1803025..1804188 /locus_tag="Silicibacter_1669" /function="COG: Diaminopimelate decarboxylase" /translation="MNAPANFDSLEVGFDVPALPGMDEADIQTPCLVLDLDALERNIK KMGDYARAHGMRHRVHGKMHKSVDVAKLQERLGGAIGVCCQKVSEAEVFARGGIKDVL VSNQVRDPAKIDRLARLPKLGARTIVCVDDPANVADLSAAAQKHDTEIECFVEIDCGA GRCGVTTTEDVVEIAQAIDAAPGLKFTGIQAYQGAMQHLDSYEARKEKLDVAIAQVRD AVEGLKAADLAPELVSGGGTGSYYFESNSGVYNELQCGSYAFMDADYGRILDQDGKRI DQGEWENAFFILTQVMSHAKADKAICDAGLKAQSVDSGLPFIFGRTDVEYVKCSDEHG VIADPDGVLKVGEKLKLVPGHCDPTANVHDWYVGVRNGKVETLWPVSARGKAY" /product="threonine aldolase, low-specificity" /transl_table=11 /EC_number="4.1.2.5" /note="identified by match to putative ortholog SPOA0146 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1804284..1805249 /locus_tag="Silicibacter_1670" /function="COG: Predicted ornithine cyclodeaminase, mu-crystallin homolog" /translation="MYIVPERVIADLMTREAAFDAVEKVFAAMAAEDAYNFPVVREAI GHEDALYGFKGGFDRAGLTLGLKAGGYWPHNLEKRGQINHQSTVFLFDPDTGKAHAMV GGNLLTALRTAAASSVSIKHLARDDAKVIGMIGAGHQATFQLRAALEQRNFEKVIGWN LHPEMLPNIEAVAAEAGLPFEAVELDGMRAADVIISITSSFEASLMADHVSPGTHIAC MGTDTKGKQEVDPALLVRAEVFTDEVAQSVGIGEAQHAVAQGLIEAADLTQLGAVING AHPGRSTDDQITLFDGTGVGLQDLAVAARVVELAVTQGIAMEVDF" /product="ornithine cyclodeaminase/mu-crystallin family protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0147 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1805302..1806213) /locus_tag="Silicibacter_1671" /function="COG: Transcriptional regulator" /translation="MAYMESLRLFCRVVELGSITSGGRDVRLTPAVASKRIKELEEHL GVRLFNRTTRSLTPTEAGKRFYREALRILDVVEEAESVVAQFSGRPRGTLKITAPLAA GRRIIAPLVPDFVDRHPEIDVQMRMSDRRVDILAEGLDLAFFVGTPSDSSLKMRKIAS VDRVLCASPRYLERHGIPHVPQDLMGKHNCLLLRYPRSPEYFWTLNTGSGFRKFEVSG KYDADDSEVLLNWALDHRGIVNKPRFEVAEHLRSGALVEILPEARPMAATFGCLYPHK KLQDPKVRLLVDFITERGQSLLDALVG" /product="Putative HTH-type transcriptional regulator yafC." /transl_table=11 /note=", LysR, substrate-binding, LysR substrate binding domain" /note="Conserved hypothetical protein" CDS 1806393..1807856 /locus_tag="Silicibacter_1672" /function="COG: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A" /gene="xdhA" /transl_table=11 /note=", [EC:1.17.1.4] , Xanthine dehydrogenase (EC 1.1.1.204) (XD) (Rosy locus protein)., Molybdopterin dehydrogenase, FAD-binding, FAD binding domain in molybdopterin dehydrogenase" /note="High confidence in function and specificity" /product="xanthine dehydrogenase" /translation="MAQGHDIRFLLNGVEKRVSDVKATLTLLDYLRLDQRLTGSKEGC AEGDCGACTVLVGRLHQGQLHYETVNACIRFLASLNGCHIVTIEHLSGPQGRLHPVQE AMVDYHGSQCGFCTPGFVMSLYALWMSNPEPSVQEVETAIQGNLCRCTGYEPIVKAAM AVTQYGSPAHDHLVRERTDVTARLMALQPSARIVTGPEDDRAILPLDVADLAQVLAEN PKATIVAGSTDVGLWVTKFMRPISPVVFITHLEELKSVEVTEEALTLGAGVTYSESEA AIRAAFPHLGDYWDRIAGWQVRNMGTIGGNIANGSPIGDTPPVLIALGAEVVLQSARG SRVLPLEDFFIDYGKQDREAGDFVAAIRIPRAKPGQMDAAYKISKRRDEDISSVAAGI SVCVTDGVITTARIAFGGMAATPKRAATAEAALVGQPFAAASFDAAAVALGQDFTPLS DWRASADYRMTVAANLLRRFYLEQDSTQGAPVRLAIA" /EC_number="1.17.1.4" CDS 1807871..1810204 /locus_tag="Silicibacter_1673" /function="COG: Xanthine dehydrogenase, molybdopterin-binding subunit B" /gene="xdhB" /transl_table=11 /note=", [EC:1.1.1.20], Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase (EC 1.1.1.204) (XD); Xanthine oxidase (EC 1.1.3.22) (XO) (Xanthine oxidoreductase)]., Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding, Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain" /note="High confidence in function and specificity" /product="xanthine dehydrogenase, C-terminal subunit" /translation="MKDLGNTTEIKGAAHQDLKHESAIKQVQGRADYTDDILEPAGTL HAYLGVSTVAHANIRGMDLSRVRAAPGVVDVLTADDIPGVNDVSPTGKHDEPVFPTEK VEFHGQPLFAVIAESRDAARRAAELADVDYEVLPHALDAISARDAGLPMVTDPLKLER GDVESGLAEAPHRLQGRVVVGGQDHMYLEGHIAFAIPGEDDDVVVHCSTQHPSEAQHM VSHVLGVPSNAVVVNVRRMGGGFGGKESQMNLFCAFAALGAKKLNRPVKIRPDRDQDM TATGKRHDFVIDYDLGFDNEGRIEAVESQFAARCGYSSDLSGPVTDRALFHADNAYFY PNVRLTSCPQKTNTVSNTAFRGFGGPQGVVAAERMIEEIAYALGKDPLEVRKANFYGQ PGDGRTLTPYHQEVEDNVIGRIVEELEESSDYQARRAAIIAENTKGGIIRRGIALTPV KFGISFTATWYNQAGALIHIYNDGSIHLNHGGTEMGQGLNTKVAQVVAEAFQVDFDRI KITKTTTEKVPNTSATAASSGSDLNGMAALDACEQIKARLVKFAAESRGVAESAVRFG PNQIRIGEEVVDFAAFIREAYMARVHLSAAGFYKTPKIHWDRAAGKGRPFYYYAYGAS CSEVSIDTLTGEYRVERTDILHDVGRSLNPILDKGQVEGAFIQGMGWLTTEELWWDKD GRLRTHAPSTYKIPLASDRPRSFNVKLADWSENREMTIKRSKAVGEPPFMLGISVLEA LSMAVASVADYRECPRLEAPATPERVLMAVERLKAGG" /EC_number="1.17.1.4" CDS 1810209..1811060 /locus_tag="Silicibacter_1674" /function="COG: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family" /translation="MQAEQLRAFLDAPGPVASLRLTRVRGSSPRNTGTEMYVRADALF GTIGGGQLEHLAIAEARKLLAAGNLSDHLDVPLGPEIGQCCGGRVEIAITRMSASDKD AALRATEAQDNALPAVYILGAGHVGRALADLLQHLPVRTVLIDQRQEELDQSSAQVER RQSAIPEIDVMNAPEGSAFIVLTHDHGLDFLLTSAALQRGDATYVGMIGSATKRAKFA SWTQDHCDGLSVADLICPIGAGGSRDKRPAVIAAQVAAEVITALTSETAADHPQTGGT ALHIAAQ" /product="Hypothetical protein yqeB." /transl_table=11 /note=", Protein of unknown function DUF182, XdhC and CoxI family" /note="Conserved hypothetical protein" CDS 1811129..1812712 /locus_tag="Silicibacter_1675" /function="COG: Permeases" /translation="MRDGSYTYKLFHRSDFSAFWALFTDNLVNLMVLAGICQFVFQMP ADIVYGRIVPGAGVAILAGIVAYVALAKRAAQAHGRDVTALPYGISTPVMFVYLFGVI GPIYWATNDPLLAWQVGIGAGFMGGIVAALGAVVGPWLKRVTPRAGMLGTLCGIALVF IGSVPLATVFENPFIGFASMIIILWGLVGRFRLPYNIPAGLLALIVGTLVALMLGTST LSLEGIGFYPPLPYLGDLIAGVQYLFANPELFLVLVPVQIYNFIETMNNVESAEAAGD HYPVATCQITDGVGTMIGAVFGSPFPTTAYIGHPAYKRMGAHAGYIIGVGAVIPLAAI FGLLAFLNNLIPVAAAAPVLVFVALSLITNTAHSVKTEHMAAVTIAMMPHVSAFLMVK WAALIGALGAVGVAGVPQLGDEALTSALLQQGAHFSGHLSLSQGAILTGLIWGAIVAY VIDGNFRAAGGFALAAAAMSALGIIHGASLHWPELTSVSGGYLIAAAFLFIYPLFHKS DDLVNANVVLEDAPPQAAE" /product="hypothetical protein" /transl_table=11 /note="Hypothetical protein" CDS complement(1812800..1813267) /locus_tag="Silicibacter_1676" /function="COG: Transcriptional regulators" /translation="MDRFDALILEAIQTDARITAEALSKQVGLSPDACRKRLARLRAS DVVESEITVLAPEQVGRGLLLIVEVTLQNERMEDLDRFKAQMRAAPEVMQCYYVTGNA DFVLIISARDMADYDDFTRRQFFADENVLRFRTSAVMDRVKTGFSMPVLDRAD" /product="transcriptional regulator, AsnC family" /transl_table=11 /note="identified by match to putative ortholog SPO2189 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1813443..1814501 /locus_tag="Silicibacter_1677" /function="COG: Tryptophan synthase beta chain" /translation="MPVTVSNPHRGQGLSLDAPFPCEDAGAVTRLLQRCPAHQETPLL SVPTLAAFCGVAKIHLKDERNRMGLGSFKALGAAHAIARAAQEVVEGDSWTTALKGRT FVTASAGNHGLSVAAGAALFGAQAVIYLSETVPEGFAARLRAKGAEVVRAGADYEASM VAAETAAEENGWTLLSDSSWPGYTELPYRVMEGYLQMAAEVAQQVPEPPTHILLQAGV GGLAAAVAAHARRVWGDAPQIIVVEPEAAPALVESIKAGAVVETKGPVSAMGRLDCKT PSMIALQGLARDADLFVTLTEAEAAAAVATLEAEGLATTPSGGAGIAALIAGLALPQD ARVFAILSEGPEEGTGDA" /product="diaminopropionate ammonia-lyase" /transl_table=11 /note="identified by match to putative ortholog SPO2196 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1814494..1815657 /locus_tag="Silicibacter_1678" /function="COG: Xaa-Pro aminopeptidase" /translation="MPETSLIFPAAEYRGRVARLQEHMTAEGVDALLLTTAADVFYVT GFLTRFWESPARPWFVIVPVLGDPVAVIPSIGAPLMQRTWIEQIRTWDAPDPEDDGRT LLIDTLTSLVPDHGNVALPMGLETHLRMALLDYHAVRSALAPRRVVDGTEILQRVREV KSEAEIAKIRSSCAIAGRAFDRVPEIAGAGRPLDQVFREFQALLLEEGADWVSYLAGG AGLEGYGDVISPAPSEPLVRGDILMLDTGAVREGYFCDFDRNYAIGPASDLAKRTHEA LWCATQTCLEALRPGMLARDVHHILCDALRAKGATPGGGRLGHGLGLTLTEWPSFTPK DTTPLRAGMVLTLEPGAITGADRILVQEENIVLRDSGAELLSPRAPAELPELL" /product="metallopeptidase, family M24" /transl_table=11 /note="identified by match to putative ortholog SPO2440 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1815654..1816412 /locus_tag="Silicibacter_1679" /function="COG: Glutamate racemase" /translation="MMTPFPYEIAEDPRPRLGLIALQVDETIEEDFRVMFPRQAARLH VSRVPSGAELTPETIAGMEDDLPAAARLLPPAARFEVIAYGCTSGTGQIGVERVAELI QTGATTKAVSNPLSAAIAALNALGVSRVGIVSPYIDAVAAPIRAAFVDAGLSVPDMLG FGEEVEARVARIAPRSICAAAHALGERSTLDAVFLSCTNLRTLDVIPLLEQQLGLPVL SSNQVLAWHMAALAGLELDDLEVPGQLGKKAAQP" /product="Asp/Glu/Hydantoin racemase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO2450 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1816463..1817566) /locus_tag="Silicibacter_1680" /function="COG: Xaa-Pro aminopeptidase" /translation="MTEFPLTAARLAALRTRMELTGTDLVALGPSSHMVWLSGVHPHG DERPVMLLVSQSYAGFLMPALNAAAARKDTDLPFHPWRDDEGPDAALAELLKACGATR PNLSVVLDETMRTDFSLRLLDALEAPRRRFADDTVSLLRASKDDSEYHAIKAAHLTND KAVKAAFAALKEGVTEREIVELIKSEYTAAGATLEFCSVCFGASGAFPHHTPGDTPLA RNSAVLIDTGCRLDGYPSDMTRSGYFGTPEEEYEEVFQTVEKAVQAALAVAKPGVVAS EIDKAARDVIAAAGYGDRFLHRTGHGLGIDIHEPPYIAANSDVVLREGNVFSIEPGIY LEGKFGVRLEEIVILREDGAEIFSEMPRDMVRV" /product="Xaa-Pro dipeptidase" /transl_table=11 /EC_number="3.4.13.9" /note=", Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase) (Proline dipeptidase) (Prolidase) (Imidodipeptidase)., Peptidase M24, metallopeptidase family M24, met_pdase_I: methionine aminopeptidase, type I" /note="High confidence in function and specificity" CDS complement(1817647..1819236) /locus_tag="Silicibacter_1681" /function="COG: ABC-type dipeptide transport system, periplasmic component" /translation="MKHLKTTLLASALMLPLAAPAVLADTPEGVLVVAQNIDDVVAID PAQAYEFTSGELVTNLYDRLVQYDAEDTTVLAAGLASEWVTDADAKTITFTLRDGATF ASGNPVTAEDVVYSFSRVVKLNLTPAFILTQLGWTADNIGEMVTGEGNTVTVKYAGDF SPAFVLNVLAARPASIVDSKLVQENEVDGDMGNAWLNANAAGSGPFTLQRYAAGQMVR MQANPTYFNGAPKIDSVIIRHVAESATQQLLLEQGDVDLARNMTPDQVASLESGEIKV ETYPQAAVHFLSFNQKTESLTPPAVWEAARYLVDYKGMTETIIKGQMEVHQAFWPKGF PGSYDETPFSYNPEKAKSILSEAGIETPITVSLDVINAAPFTDMAQSLQASFADAGIN FEILPGTGSQVITKYRERSHEAMLLYWGPDFMDPHSNAKAFAYNSNNADDSYAATTTW RNAWAVPDALNEKTMAALTESDAEARLNMYRELQKEVQAESPIVIMFQAAYQVAMNEA VSGYVNGATSDFVFYRLVEKQ" /product="Periplasmic oligopeptide-binding protein precursor." /transl_table=11 /note=", Bacterial extracellular solute-binding protein, family 5, Bacterial extracellular solute-binding proteins, family 5 Middle, nickel_nikA: nickel ABC transporter, periplasmic nickel-binding protein" /note="Conserved hypothetical protein" CDS complement(1819282..1819896) /locus_tag="Silicibacter_1682" /function="COG: Predicted transcriptional regulators" /translation="MQREKPSTEPNVGPAIRKRRKQLKLTLQALSDRSGVSVGYLSQV ERDNATPSLGTLAQISAALDVGLDYFISASKPSDGLTRSGSRPLFALDDSSLRYEALG ADFPGSEMSAYILHIPPGYVSETVHHEGEEIIFILEGEIQQTLGGQTFSMMPGDSLHY SGDTPHAWSNPTDQNARILWTGTLTVLNRKGAIELPELSHKQST" /product="DNA-binding protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3403 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1820035..1821186 /locus_tag="Silicibacter_1683" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /translation="MPETPTTASDAALTQSFHNARSPARRGFERKKGTRPLSTAAPSH AGLRKTASAFGGFVIVTFLTFVGLMAITFFIGRVIPIDPVLAVVGDRATQEQYDAARI AMGLDQPLVVQFITYVGDVFQGDLGHSVSTNRPVAEDLARVFPATLEMATLGIIIGVG MGVPLGVWAAARQGTWVDQLIRVFALLGYSVPAFWLGLVGLVVFYAGLGWVGGPGRVD IFYEGLVEPRTGLLLVDSLIVGDWEVFWSALDHLILPATILGFFSLAYIARMTRSFML DQLGQEYITTARVKGVSEWRVIWTHGFRPIRVPLITVIGLSYAALLEGSVMIETVFSW PGIGNYLTVALLNADMNAVLGATLVIGSVFILINKLSDVLYRILDPRSR" /product="Dipeptide transport system permease protein dppB." /transl_table=11 /note=", Binding-protein-dependent transport systems inner membrane component, Binding-protein-dependent transport system inner membrane component" /note="Conserved hypothetical protein" CDS 1821196..1822101 /locus_tag="Silicibacter_1684" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /gene="dppC" /translation="MTTMTNWLLDDSPSSRLQASLGHSYRVTRMLMRNPLAVVGAVIL LVLILAAIFAPWIAPHSPLGQNLGQRLLPPSAEHWMGTDELGRDIFSRVIYGARITLL IVALVAVISAPLGLLIGAVSGYFGGWTDKIIMGVTDVFLSMPKLILALAFVAALGPGI ENAIIAIAITSWPAYARIARAETLTFRNSEFISAMRLLGASHTRIITRHVLPLCTSSM IVRVTLDMAGIILTAAGLGFLGLGAQPPLPEWGAMISRGRAFILDQWWVATMPGFAII IVSLGFCFLGDGLRDVLDPKQGGKS" /product="Dipeptide transport system permease protein dppC." /transl_table=11 /note=", Binding-protein-dependent transport systems inner membrane component, Binding-protein-dependent transport system inner membrane component" /note="Conserved hypothetical protein" CDS 1822098..1822937 /locus_tag="Silicibacter_1685" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component" /gene="oppD" /translation="MSDMPLLELENLRVSFPTPQGRVEVVKGLSFTLGRERLGIVGES GSGKSMTGRAILRLVRKPGRQRADRMIFDGIDLQKLSEGKMRDLRGARISMIMQDPKF SLNPVMTIGAQIAEALKTHESLARSEVKSRVLEMLHSVRINDPERVVNLYPHEVSGGM GQRIMIAMMLIPRPDLLIADEPTSALDVSVQAQVLDLIDELVRDKGMGLILISHDLNL VARYCDRILVMHAGEVVESCAAEDLHKATHPYTQGLLAAVPRIEETREELPVLDRSAW SGT" /product="Dipeptide transport ATP-binding protein dppD." /transl_table=11 /note=", ABC transporter related, ABC transporter, CP_lyasePhnK: phosphonate C-P lyase system protein PhnK" /note="Conserved hypothetical protein" CDS 1822934..1823683 /locus_tag="Silicibacter_1686" /function="COG: ABC-type oligopeptide transport system, ATPase component" /translation="MSAIILKNLDISYGHTKVVEGVNIEVAEGESFALVGESGSGKST ILKAIAGLAPDWSGEISVLGQPRGRAVDQGFATRCQMVFQDPYGSLHPRKSVDTVLSE PLKIHGLGNRDTRVIEMLAAVGLDQRFRFRYPHQLSGGQRQRVAIARALMLEPKVMLL DEPTSALDVSVQAEILNLLKKLRREQGLTYLMVTHNLPVVSFMCDRMAVMNKGRIVEI APATALHDGSFTDPYTQSLYAASGGNPDRKD" /product="Sulfate/thiosulfate import ATP-binding protein cysA" /transl_table=11 /EC_number="3.6.3.25" /note=", Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase)., ABC transporter related, ABC transporter, CP_lyasePhnK: phosphonate C-P lyase system protein PhnK" /note="High confidence in function and specificity" CDS 1823687..1824175 /locus_tag="Silicibacter_1687" /translation="MTDTHTARLSFEKALSDATTQDQAYDALCALTKATVGAKLFTVM TADMDAMLARRVYTDDAENYPTTGTKEIEMNRWFEQVHGRHETFVSNTLADIDTVFPD AELIGKLGCGSVINLPVILGGKMVATINILHEEGYYTPERVALAQEVLTLPAMAVLAL AA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3802 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1824405..1824566 /locus_tag="Silicibacter_1688" /translation="MLSWALAFLVIALIAAVFGFGGIASASAGIAQILFFIFLVMFVV ALILRAVRG" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Protein of unknown function DUF1328, Protein of unknown function (DUF1328)" /note="Hypothetical protein" CDS 1824621..1825118 /locus_tag="Silicibacter_1689" /function="COG: DNA-binding ferritin-like protein (oxidative damage protectant)" /gene="dps" /translation="MSNALNVKPQLAPVETGVRDTKAIAEGLSDVLADTYRLTLKSHI YHWNVEGPLFFSLHNLTEEQYQNMFAAADELAERIRALGHLTPGKINGVLSDSIVDDL GQMPSAGEMCKDLEQDHMKLAHRLHALVELAEERKDMVTGDLATERAAFHEKAAWMLR ALSAS" /product="Hypothetical low temperature-induced protein all0458." /transl_table=11 /note=", Ferritin/ribonucleotide reductase-like, Ferritin-like domain" /note="Conserved hypothetical protein" CDS complement(1825274..1826095) /locus_tag="Silicibacter_1690" /function="COG: FOG: CheY-like receiver" /translation="MSTSTTGQALTLSDVITPHLPYLRRYARALTGAQQSGDAYAAST LEAILADPSCFDAQSAGGKVALFKVFHTLWSSSGQPVLEADEGPRARALQHLSSLTAN TREALLLNTVEAFSVGEVALIMDLSESEAAGLIQLARDEMQQSVSGKIMIIEDEAIIA MDLEGICSMMGHEVTGIARTRKAAVKLGLEEKPDLILADIQLADNSSGIDAVADLLEE LGDVPVIFITAFPERLLTGERHEPAFMIAKPYVPDQVISAISQAMFFASTDTLTS" /product="MrkE protein." /transl_table=11 /note=", Response regulator receiver" /note="Conserved hypothetical protein" CDS 1826208..1826405 /locus_tag="Silicibacter_1691" /translation="MANKFSQQPWDTLIDENLKRVFDEDANADLPPHLMDLLDRLDKI PVAEGSQGAPDASASSGEEAD" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1826406..1826963 /locus_tag="Silicibacter_1692" /function="COG: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog" /translation="MDRQSAKAELTSHMKVLRAFAMSLTRNDAAADDLVQDTVLKAWS NLDKFQEGTNMRAWLFTILRNTFYSGRRKAVREVEDSTGSITESLSVKPAHDGRLQLE EFRRALGELPVEQREILTLIGVLQYSYEEAAEVCGVKVGTVKSRLNRGREALAAKMQL DANEQLELTDAATHAVVAANNGTAA" /product="RNA polymerase sigma-70 factor, ECF family" /transl_table=11 /note="identified by match to putative ortholog SPO3125 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1826969..1828810 /locus_tag="Silicibacter_1693" /function="COG: Predicted signal transduction protein with a C-terminal ATPase domain" /translation="MNFPSLALLKGGDARTHETSLSEDPTAQNRAAGWTRSLSLRLAV MLSIAMVPLGLIAVDQTVRLQKEVNTSNNLSLQALTAEFAQEEREIIKSAFASAETLT LSVPEIAHDLSRCSSLMRRFISTTDARYSFAGFLPQDGVMACASSGGTIDYSENPDFP DWMRRPKREIRVNSYGPVAGSAVLIISEPVFASTGVFLGNQIIHVPHDRIDQQFQTKL GDRPLDLVTVSAEGEILSASGARETALERLPIDLTLSELISIHDGQIEAKNAAGEVRL FSIVPILSDTFYVIGSWDPEGISLAQETSALRYLFLTPALFPILMWLVSLVLIYVALD HQVVRHLRVIGLQMRQFASSRVLPDVQTNGLMPHELEVIQNQFTYVAEKLLHDEAHLF DAMHDKDVLLKELHHRVKNNLQLISSIISMQMRRTRNQVTAAALKTVNQRVTSMATVH QTLYQASELGQVQANDLLRDVVRPLTELAPTTAPVPKIDITLDPVVLYPDQAVPLALL TVEAATNALKYLGVDKAGNRWVRVSLTTIEDGRVCLMISNSTNDETDFEDEGTGLGSQ LIRGFARQLECSPEITEGEDSYAISVTFDTLPFDSEDTGKTGIEDED" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", ATP-binding region, ATPase-like, Histidine kinase" /note="Hypothetical protein" CDS complement(1828935..1829522) /locus_tag="Silicibacter_1694" /function="COG: Uncharacterized ABC-type transport system, permease components" /translation="MTQTSHPVEDVLDQTDALLREGADGLRVSDLMDELGVKSIAAVL LAPSLALVSPLSGIPLFSSACGVTIALISVQMLMGRNHLWMPEVLSKRSLPADKTQYA IRALRAFAAWLDRRFKRRLTSLLTPPFLRVIQGICLLCGLIMPFLEIVPFTSSILGGV VALLALSMLIGDGLIALVTVAGLGLALGGAALHLL" /product="ExoD protein." /transl_table=11 /note=", Exopolysaccharide synthesis, ExoD, Exopolysaccharide synthesis, ExoD" /note="Conserved hypothetical protein" CDS 1829736..1830224 /locus_tag="Silicibacter_1695" /translation="MKHLIRTTALVATMATAAGASTMVQDIDVTADVSALENRDAVSV WGALETDLERALAAQLVDQIASEGAEDAADIDIEIDTLALASSLETEMGLANSVLEGD VSVDLPGSQYDQRYSLTVRAEQAHVHYPQGTDVSALNVGSEVFYTAMVDAFAAHVAEK LK" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1830237..1830365 /locus_tag="Silicibacter_1696" /translation="MRMRYLSLLAILGLAACETAEGLGRDVSTLGAEIEQEAQEAQ" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(1830408..1831565) /locus_tag="Silicibacter_1697" /function="COG: Putative ammonia monooxygenase" /translation="MPRLWRGGCFACRVRWAFCPTHGSSSNRAGATRDRPRPNTDGRM TLTDVFGLVGALGVAVLGTLIFEAIGFPSAPLTGSAAAVSLAALFGLPIRMPVWLRTT AFVLLGINIGSSVTREMLASALAWPVTIAILAVSLFVSLQISRIGLERWMRFSPRDAA LAAAPGHLSYVLALSLSDGGQTSRIAVVQSIRVLFLTLCVPVLVSLVFGATGVELMPE YVLSNWHLAALVGVTLVVGAVFDRLNIPAAYLLAGIFCSAAGHIFAVTPGRPPEAATI LAFLVMGTLIGSRFVGQRLADLKVDFAAGLWVTGINVTVTLIAIGVAMQVMGLSPALL IVAFAPGGVEAMAAIAVTLGLDPAFVAAHHVMRLMILTVLMPLALRRAKAG" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0387 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1832187..1833374) /locus_tag="Silicibacter_1698" /function="COG: Predicted acyl-CoA transferases/carnitine dehydratase" /translation="MGIKPLSGVRVLDLTNVLAGPYCCYQLALLGAEVIKVERPGTGD LARQLGADPERNKSLMGVSFLAQNAQKKSVTLDMKHETGKALLKRLVRSSDVLVENFR PGVMDRLGLGYEVLKAENPNLIYCAISGFGQDGPWKNNPAYDQIVQGISGVMSITGDG ESAPLRVGYPLADTVGGMTAAFAISAALNDPERGAFLDISMTEAVISTMGWVVSNHLI AGQTPGAHGNENTTSAPSGTFACADGPINVAANRDEQWQSMARHLGRADLLDHPDYAT REDRKRNRHMLRAELECVLRTRPAANWVAELNALGVPSGPVLTVPQILEEPQIKDRGL IAEVETEGAPLSLAGAPVRFGTHRPVPDQAPPVLGADNTSIWQDLGLSAEEIETLRQE RVI" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", L-carnitine dehydratase/bile acid-inducible protein F, CoA-transferase family III" /note="Hypothetical protein" CDS complement(1833364..1834884) /locus_tag="Silicibacter_1699" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MLEGLMIGLSTAFSVTNILMVIGGCLIGTFIGMLPGLGPMSIIA IMIPVAITLGDPSAALILLAGVYYGAIFGGSTSSILLNAPGVAGTVASSFDGYPMARA GMAGKALTIAAISSFMGGTIGAILLMVFAPMLSTVALLFHSAEYFALMVVGLSAIAAF AGTGNVAKALMMTLLGLMMATVGEGALFNMPRFTMGLMDLQSGFSFITLAMAMFALPE AIFLVMNPKRAAQGGENGGKITGLRISGQEARKIAPVIGRQSIQGFFIGVLPGAGATI ASFLGYAVERNIATESEQKEFGKGSIKGLAAPETANNAACTGSFVPLLTLGIPGSGTT AILLGALIALNVTPGPRLMVDSPHIFWAVIISMYIGNLVLLVLNLPLIPYIAKVLSIP RNYLIPFILFFTLMGSYIGQNNATELLILVGFGICATVLRFADYPLAPLLIGFILGRM LEDNFARSMQIYDGVSFILDRPMTLGLLVLAILLVIVPSYRARRARARAAGVADGD" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0184 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1834897..1835382) /locus_tag="Silicibacter_1700" /translation="MALDRWIALIILGIALAYGYAAFFTMDQLLPPFMQRNPIWPSTF PKVLAVLSIITAAVIVLGLEKPSGETKTPDIDYRRLGDYNIGQAALLLGLMVAYALLL RPAGFLLSTSGFLIVGAMILGERKLWVLVPVAALATGIVWYLVEGVLGIFLRPLPFFL G" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0185 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1835469..1836449) /locus_tag="Silicibacter_1701" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MTSFALGRRTLMAAAAAALTFGSPVMAEQALDKLHFLIPGGAGG GWDGTARGTGEALTKSGLVGTASYENMSGGGGGKAIGYLIENAESLEDTLMVNSTPIV IRSLTGVFPHNFRDLTLVAGTIGDYAALVVAKDSPINNMEEFLAAYREDPRGTAVGGG SVPGGMDHLVAAMVMQSAGEDPTALKYIPYDAGGKAMAALLSGEIKALSTGFSEAIAL AEAGEVKILGVTADERVPAYDAAATMKEQGLDTTFVNWRGFFGAPGLSEDKVAAYQDV LAKMYDTPEWEDVRARNGWVNIHNSGDEFKAFLEGQEKVIGDLMKQLGFL" /product="bordetella uptake gene family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0186 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1836489..1837217 /locus_tag="Silicibacter_1702" /function="COG: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /translation="MNHGIPAQADTNLTRSRCFAAMRYLLVEDNDQLANAVLDRLTLD GHVVDRAPDLGTADDFMATTEYDMILLDIMLPDGDGRQFLQAHRAAQRDTPVIVLTAR SEVSDRVSVLDLGADDYIVKPFDFSELEARCRAVQRRRSGGASNIHSFGDVVFDPLAC TLTVNGREVRLRNRELRLFEIFIAAPDQVFSKSKLVDRLFSYDVDASENAIEVYVGRL RKHLEGARAQIVTVRGLGYRLSLS" /product="DNA-binding response regulator" /transl_table=11 /note="identified by match to putative ortholog SPO0187 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1837214..1838599 /locus_tag="Silicibacter_1703" /function="COG: Signal transduction histidine kinase" /translation="MSTPILLRGSIRRRLIIQLLTGAALLAGLMFLVVQNYARDLAGQ SQDEILSASVTAILDSASVRNGDLTVDIPYFAFSMLGNISEDRVFYAITRNGAFMTGY SDLPRPVASTGLSPRFQTAQYDGEEIRMATATRRLSVSGTPDFIEVTVAQTRYGLRQQ LAGISQTVAGFGIGFFAIAAFFGILAAQSAIQPLRALAGAVSRRGLSDLRPVSAPVPA EMESLVGALNGFMSRLKTSLSRSEDLIAEAAHRVRTPLTTVRTQAEITLRRVDKPENR QAVREMIRAIDESSRAAGQLLDHAMVSFRSDHLEMEDVELTRLARDAVSRLHPMAELR DIDIEITLPDAHMVVKGDPILMQSALLNLLDNAIKYAPPDSIVHVTVRPTESGAEITV RDEGSGFPKADMGRLTRRFVRGGNTETVVGSGLGLTIANEVARAHGGRLFLTNHSDKG GACASLSFPLA" /product="sensor histidine kinase" /transl_table=11 /EC_number="2.7.3.-" /note="identified by match to putative ortholog SPO0188 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1838569..1839606 /locus_tag="Silicibacter_1704" /function="COG: ABC-type Fe3+ transport system, periplasmic component" /translation="MRKLVFSLGLIFSGLISLALAAPLQAFEIEDQISVGPADARRVL RVISTGDAEFFEPTLREFLSDLPDVRIVYTVASSGEMMKALDEDGFDADLAISIATDL QTKLVNDGQAQPYSSATTERLPAWARWRDHLFAFTQEPAAVVLSRKALEGLPMPQNRQ DLIALIRDYPERFQDKVGTYDIRASGLGYLYATQDARTSETYWRLSEVMGSVGLRLYC CSSQMIDDVATGELAMVYNVLGSYAREKSNWDDVIVLLPQDYTVVALRTAFIPRDSQA PELAGLMIDHLIARGWQAAPGAFSVLDDDSWSDDAQALRRIRMGPGLLVYLDALKKAA FLEEWSSAVLR" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0189 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1839611..1841995) /locus_tag="Silicibacter_1705" /function="COG: Pyruvate dehydrogenase complex, dehydrogenase (E1) component" /translation="MSQNIEHLRTVEQRLLWLSHWMIHNANHLRAKEDGIKIGGHQAS SASMVSIMTALYFSALRPEDRVAVKPHASPIFHAMQYLMGHQTREKMENFRGYGGVQS YPSRTKDIDDVDFSTGSVGLGVGITALASMVQDFITAKDWGGDVTPGRMVALVGDAEL DEGNIYEVLQEGWKNDLRNTWWIIDYNRQSLDGIVREGLFGRIEKIFEAFGWDVVRVK YGALQRAAFEEPGGEALRDWIDACPNVEYSALTYMGGANWRKRLMEDLGDQGAVSALI DKRSDAELAALMENLGGNCVETMADTFAAIDHDRPTCFLAYTIKGWGTPIAGHKDNHG GLMTKAQMAEWQTHMGVAEGEEWELMATVSDTKGFQAYLDQVPFFAKGARRHSDARLS VPAVAVDTSREISTQMAFGKILDDLARGDSDLAARIMTTSPDVTGTTGLGPWVNRRKL FAREAQKDAFIEHRIPSTAKWNFDPKGQHLELGIAEMNLFLLLGAAGLSHSLWGKRVI PIGTVYDPFVHRGLDALNYACYQDARFMIVGTPSGVTLAPEGGAHQSVGTPLTGMAQD GLASFEPAFADELAVIMEWAFDYMQRDGEGDPDERTWLRDETGGSVYLRLTTKPLEQP GQRVDDAFRQGAIDGAYWLRKPGPNCSVVIAYQGAVADEAIAAAGLVGEHRRDVAVLA VTSADRLNAGWTAAQRERARGNPQAVSHVERLLGELPAHCTLITAIDGHPATLSWLGS VAGHRVVSHGVEHFGQTGTIGDLYRHFGLDRHSLARSVGELTTGARRIPGGQAG" /product="transketolase, putative" /transl_table=11 /note="identified by match to putative ortholog SPOA0319 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1842007..1843209) /locus_tag="Silicibacter_1706" /function="COG: Cystathionine beta-lyases/cystathionine gamma-synthases" /gene="megL" /transl_table=11 /note="identified by match to putative ortholog SPOA0318 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="methionine gamma-lyase" /translation="MSETKGFATRAIHHAYDPMQNEGALTPPLHLTSTFVFENAEAGG EMFAGEREGHIYSRISNPTCSLLEQRIATLEGAEAGLALASGMGAVTAILWTLLSPGD EVIVDKTLYGCTFAYMRHGLAKWGVTITHVDMTDPAALSAAVSEKTRVVYFETPANPN MRLVDIKRAAEIAHSVDARVVVDNTYATPYLTRPIELGADLVLHSATKYLGGHGDVVA GLVAGSAELLTEIRLVGMKDMTGAVMAPFNAMLIMRGLKTLALRMDRHCASAQTVAEW LEAQPGVAKVYFPGLKSSEQHEIAKAQMAQPGGMIAFELEGGMEAGISLMNRLQMIQR AVSLGDAETLIQHPASMTHSTYTPEERAEHGISDGLVRLSVGLEEVSDILDDLQQALS PQMRQAAE" /EC_number="4.4.1.11" CDS 1843323..1843781 /locus_tag="Silicibacter_1707" /function="COG: Transcriptional regulators" /translation="MDSKDRQIIRVLQAKGRMTNQDLAEAVNLSPSPCLRRVKNLETA GVIRGYSADVDARAYGLPITVFVRIKLERHNEEDVRSFERRVQMIDEVLECHILTGAT DYQLRVVVADLDAYEDFIRNRIHPIGGIASIDTSFVYSTVKNTSVFPRLG" /product="transcriptional regulator, AsnC family" /transl_table=11 /note="identified by match to putative ortholog SPOA0317 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1843838..1845721) /locus_tag="Silicibacter_1708" /function="COG: N-acetyl-beta-hexosaminidase" /gene="chb" /transl_table=11 /note=", [EC:3.2.1.52] , N,N'-diacetylchitobiase precursor (EC 3.2.1.52) (Chitobiase) (N- acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase)., Glycoside hydrolase, family 20, Glycosyl hydrolase family 20, catalytic domain" /note="High confidence in function and specificity" /product="beta-N-acetylhexosaminidase" /translation="MHFHLDSLWHAEEGAMEFALTNCGTTPVTNPRLVYATLTRCLRP SNCTGARLVRRQANFHEYASDEGFVLAPGETWRFTEHSLTRPALHSNEGPKSAGVLLE DDTLVLAFAGDLQASVVEGHATAVQNAALTCGILPEPKRVAISNWAETAPVHLALQSD DAAVMQLVSRVSELTRRLHPLAPTPFVLTAKEDVALLCITPDQTLPADGYRITWDEGK TTLHHGSGRGLFYGLVSLAQMLTHAHAEPQRYGVPLSGEIEDAPRHGWRGAHLDVSRQ FYPLDQVLRYVDIMAWHKMNRFHWHLTDDEGWRLEIKAYPQLTETAAHTGMDLPVLPQ LGPDMTGQSGFYTQDEARQVVKHAAQFGIEVMPEIDVPGHCACVLGALPDLVDPEEPE SYWSVQGFANNALNPAIEESYTFAETVLAEVCEIFPFEVVHVGGDEVAEGAWMQSPKA QAMMRETGLKDTPQLQAYFLRHIQTYLAGLGRKLGGWEEVAHGGGLDPEHSLLFAWTT IEKTAELAQEGYDVISTPGQAYYLDMALSDAWYAPGASWAGFTPLDKTYAFEADNGDP VLQGRLKGVQACVWSEHLTTMARRNHMIFPRLSAIAEAGWSAAENKAYDRFKSLAELM PRL" /EC_number="3.2.1.52" CDS complement(1845757..1846212) /locus_tag="Silicibacter_1709" /translation="MPDMLVPLYRLPRMPDLAPDIKIRPALPFESHVLLAFVGQHFSS KWVDECTVALAARPSRVLIATEGSRLLGFACFDVTCRGFFGPTGVDPEARGKGLGKAL LLAALHRLRDEGFAYGIIGQAGPVAFYEQACGAVVIPNSDDGVFDNALV" /product="acetyltransferase, GNAT family" /transl_table=11 /note=", GCN5-related N-acetyltransferase" /note="Hypothetical protein" CDS complement(1846205..1847134) /locus_tag="Silicibacter_1710" /function="COG: ABC-type oligopeptide transport system, ATPase component" /translation="MLSETPILSLENLSKTFTLRPAFGRATQVNALRNVSLDLMPGRA LALVGESGSGKSTVGRMIVGHHTPTSGRILFEGQDIAELTTRADQMRYRQAVQMVFQD PFSALNPAHTIRHHLLRALSLHQPDADPETALRMILEDVELDPVSTPAKFPHELSGGQ RQRVNFARALAVKARLIVADEPTSMLDVSIRKSILGLMQRLKDEHGLSLLYITHDIAT AEYLAEDTAVMFRGQVVERGPTARVVGAPQHGYTKLLRAAVPDPELRLTGSDAGFAAE ARRVRGQSAHDVQAFREVSPGHVIAEHAEVAHA" /product="Sulfate/thiosulfate import ATP-binding protein cysA" /transl_table=11 /EC_number="3.6.3.25" /note=", Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase)., ABC transporter related, ABC transporter, CP_lyasePhnK: phosphonate C-P lyase system protein PhnK" /note="High confidence in function and specificity" CDS complement(1847124..1847936) /locus_tag="Silicibacter_1711" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component" /translation="MSALLSVEGLRVDYLTAGAPFTAVRDISFEIQPNEILGLAGESG CGKSTVAYALMRLHKPPALVRRGRILFEGRDVLSFSDKDLRAWRWSEVSMVFQSAMNS LSPVMTIFRQFYDMLRAHGTITKADAMARTADMLEMVGIPADRMHAHPHQLSGGMRQR VALALALTLQPKLIIMDEPTTALDVVVQREILQEVLRLKDKLGFSVLFITHDIALMAQ ISDRIGIMRAGEIVEIGTAAQIVTNPSHDYTRSLWEAMPILAKRPEGARHAV" /product="Dipeptide transport ATP-binding protein dppD." /transl_table=11 /note=", ABC transporter related, ABC transporter, CP_lyasePhnK: phosphonate C-P lyase system protein PhnK" /note="Conserved hypothetical protein" CDS complement(1847933..1848841) /locus_tag="Silicibacter_1712" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /gene="dppC" /translation="MSDLLRTFLRNRKAAIGLTIVLIYVAIAIAAPLIAPFDPIARVG RPHQPPSVEHWLGTTRMGRDVFSQLVWGTRTSLMVGIVAGLIVTAIGTFIGITAAYFG GLVDDILNFFTNVVLVLPQLPLLLVLAAFLGQVGPWAIALIIGLTSWAWGARVTRAQA MSLKTRDFIQASAMIGEPTWRMILVEMLPNLLSIIGFNFIGSVIFTIITEATLEFLGL GSPLALSWGTMLYNAQTASAIMVGAWWEVLAPCAAIVLIGVGLSLMNFGVDEIANPRM RTLGNVAKALRIEKRLLRQRMQEAEQ" /product="Dipeptide transport system permease protein dppC." /transl_table=11 /note=", Binding-protein-dependent transport systems inner membrane component, Binding-protein-dependent transport system inner membrane component" /note="Conserved hypothetical protein" CDS complement(1848841..1849875) /locus_tag="Silicibacter_1713" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /translation="MSGPAFGAPHSPPDRWFDLMRFLLKRLGFYAVAFLVAATFNFMI PRLLPGNPADIMLANSGGMIAPEAREALMATFGFIDAPLHEQYFAYLGSIFTWDFGLS IKFYPMPVADVLTQALPWTLFLTGAALLISFSVGTLLGVLAAWRRGQLTDVIASPTAL ALQSVPAVVVALCGLYFLAVRNRFFPTSYAFDPKLDPSWSWEFISSVAYHGFLPVVTL SVVLIGGYLITMRNNMIGQLGEDYLAMAEAKGLSDARVRYAYAARNALLPSVTALALS FGALFGGSLITEVVFNYPGVGNLLYLGIVGRDFPLIQGQLLIMTLAMLLANLAVDLAY VFLDPRLKRA" /product="Oligopeptide transport system permease protein appB." /transl_table=11 /note=", Binding-protein-dependent transport systems inner membrane component, Binding-protein-dependent transport system inner membrane component" /note="Conserved hypothetical protein" CDS complement(1849907..1851562) /locus_tag="Silicibacter_1714" /function="COG: ABC-type dipeptide transport system, periplasmic component" /gene="dppA" /translation="MKFTATAGLLASVALWTTAAQAEETVLSALPEQVTAWVENFNPF NQTTAAPSVMHFMYEPLIIFNALDGGKPIYRLATAFEYSDDLSSITVTLRDGVQWSDG EAFTADDVVKSFDLALSDPALDSVGMAQMLSGVEKLDEMTVKFNLSTPSSQAMYQIVR VPIVPEHVWSNVSDPVTFTNPDPVGSGPLTEIRRFTPQEYIQCRNNNYWDAESLKVDC MRFPQIANNDQALAAAANGELDWMGSFLPDIDNTFVAKDPEHHSYWLPAGSLVAFYMN FEAKEAGDKEAVNNVAFRRAVSMAFDREAMVEIAGYGYPTINQYPSGLGRAYHAWNNP EVEDKFGAFTQYDIEGAKAQLAEAGFKDIDGDGFVETPSGEQIDIEVIVPNGWTDWVN SSQIAVEGLNAAGIKANVSTPESAIWTEKLIKGDYDMAINSVRVGATPFNQYLDSLHE INQAKSRFAASRYYNEELSDLLDAFTQTSDTDKQMAIMSDVQEIVGEDMPLAYVFNNP RWYQYNTKRFEGFFNADNPVANPVVHKTNPARLIHLLNLRPVE" /product="Periplasmic oligopeptide-binding protein precursor." /transl_table=11 /note=", Bacterial extracellular solute-binding protein, family 5, Bacterial extracellular solute-binding proteins, family 5 Middle, nickel_nikA: nickel ABC transporter, periplasmic nickel-binding protein" /note="Conserved hypothetical protein" CDS 1851914..1855204 /locus_tag="Silicibacter_1715" /function="COG: Signal transduction histidine kinase" /translation="MPLQGIRARLLFTFLLASVLPLTLGGMVFYRLVNQTIATETFQK VAFVRDAKASEIMQYMTYARRQAENLAQSANVRYSVGEFYGFSHALRQMQGTPEEAGA KLRNIFDIDGPAAPPSGIGSEDRLLREALEYSNTHRRFHAGFLDFLNEAEFDNLYLAD RHGQVVYSVHKDRYLGRVLQPQTPGLGQAYTRAVNQPGFDPVFQDYARDAVTGQLVAY LAVPVRLHGSNKGAMILRMPPNSLHRLMIESETALTVLSSQGTIIATSAPPPDNATES LPEAMRASEGVALLEAGLSGDPSLSAWRVLEPPFPAWTVVAEADRDAAFANSSQLRNA LFLIGAVAVTGLGLLSFVFANALTRPVRRLSEAASAVATGSLNEALPEYERPVEYARL SRAVNQMRRALRDQLDMIRDKNAELQENLRQIGEKNAKLEEADRMKDRFLANTSHELR TPLNGIIGILETLEGGAMGDMLPAQASQLRLITFSARRLSRLVDDLLDIYRIREGRMR LDLQPVDASHALRNVLQLLQPTFQVDPAKFHVDLPGDLPALTADPVRFEQILFNLLSN AVKYGGGSEVYITAEERPSGHVALAIRDHGPGIAADSMERIFHPLEQLMPDGSGQATG TGLGLTIARHLADLMAGSIEVSSTPGEGSEFRVVLPLSDLPAVAPLEEWLPNPPAPVP MMHTKPGEPSPIAPDGSPLILAVDDEPINLQVLQNVLLPQGYRITTARNGSEALRSVA QERPDLIVLDVMMAGLSGLDVARDLRRRHGLHELPIILLTARGRTSDMLAGFEAGAND YVVKPFVKDELLSRIRTLLEASRARSRAEENRELKEEIERRIQIEDALRLSQRRMTQL LDVLEDGLICINARGVVTYVNEAAQQVLKQRVTVNRSRLSDVLPQDVLAPLEQTEVED EPIHMEITLRGTSHQVSLFAMLPEAGGGRAVLFTQAQSSRDQFVHSLRDVVDTSLPSL IPGDVTEDASTTPGDTYRDTIVTLMSDSLDIWSAATGKGKIDFAETSGIWRVNLDKTS LQTRTLDKYLLIETLPDNPRWRDVLKTVSFVLSLKERETADPALAQRFEALETQLEAF RTLIAQRG" /product="Ethylene receptor (EC 2.7.3.-)." /transl_table=11 /EC_number="2.7.3.-" /note=", Histidine kinase, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, PhoB: phosphate regulon transcriptional regulatory protein PhoB" /note="Conserved hypothetical protein" CDS complement(1855210..1856112) /locus_tag="Silicibacter_1716" /function="COG: Transcriptional regulators" /translation="MAPENSPTQGAVDLISNLRELNGSFAAREQKVADFVSAHLEEIS NMTIAELAGAVGVSTPTVVRFCRSMGCDGFREFKLRLAQNLAVSLQYLAPSQREVPEG GAGAVDQVLGALYATVNVMRQQLVPERLDAAAAALAAAGQIVVAGVGGGSTMVAQEAA NRMFRLGIPAVSISDSYLLQMRAATLVKGDVLLLVSASGAADEIVSAAAIAGGYGATV VAIARPGSRLAQEATVAIEADLPEDPDILKPTASRYAHLVIVDALAMSVAQARTAATT ENLRRIRASLTAYHGRTGPQPLGD" /product="Putative HTH-type transcriptional regulator CAC0191." /transl_table=11 /note=", Sugar isomerase (SIS), Helix-turn-helix domain, rpiR family" /note="Conserved hypothetical protein" CDS 1856288..1856809 /locus_tag="Silicibacter_1717" /function="COG: TRAP-type C4-dicarboxylate transport system, small permease component" /translation="MIGDFAGRLSHQINRGTEVILAALMVALVLDVWIGVVDRYFFHW QLPWPEVLARYLMIWAAMLAVSSGIARREHIGLTAVLMILPAPLRRGMLILIDLMTFA LFFYVLWFGIGFAESGAKRQAMILGATLQPFYMAIPAAAALACVQVVLVMIRDAGGQL DLNDTDSKEGAGA" /product="Hypothetical protein HI0147." /transl_table=11 /note=", Tripartite ATP-independent periplasmic transporter, DctQ component, Tripartite ATP-independent periplasmic transporters, DctQ component" /note="Conserved hypothetical protein" CDS 1856806..1858092 /locus_tag="Silicibacter_1718" /function="COG: TRAP-type C4-dicarboxylate transport system, large permease component" /translation="MIVGICFVVLLAVGMPIGFAIGLAGVIGIFTMGGGSTFLAIGPS KIFNGLNIFPFLAMPFFILAGEIMNSTGITGRLVKLAEVLVGRFRGGLAHTNMLASVF FAGLTGSATADAAAFGRTLVPAMVKQGYKRDYACAVTAAGSIIGPTIPPSGLMVVYGS LMGVSIGGLFAAGLLPGLVICAVCMGVIAIGGKRENLPKAARGASLGEVWRTFLSSIT ALLMPIIILGGILGGIVTPTEAASIAVAYALFIGFFVYRTLTFPDLYGMLIRTARITG VIFVIIAFASILGWWMSFERIPQAIAGSVLGLSENPYAVIAIIICILLVIGMVMDITA ILIILGPVLVPLTEQIGLEPIHAGIIFVLALNISLMTPPVGACLFVLSSVTGEKLERI SVKLAPFLIAEVIILFLFAFWEDAALLLPRALGFAP" /product="Hypothetical protein HI0147." /transl_table=11 /note=", TRAP dicarboxylate transporter, DctM subunit, TRAP C4-dicarboxylate transport (Dct) system permease DctM subunit, dctM: TRAP transporter, DctM subunit" /note="Conserved hypothetical protein" CDS 1858142..1859185 /locus_tag="Silicibacter_1719" /function="COG: TRAP-type C4-dicarboxylate transport system, periplasmic component" /gene="yiaO" /translation="MKSVLKTAAVGAIAALTASSAMAGGTIRFGHDNKTDPFENPAHA CTAVFQNIVTADTNGSVTVEVFGSNQLGTAAEHVQQVRDGVIQATLTSTGALASYYPR IDVLNLPFAFANNASTYSVFDGEFGEALAADIEAELGDVVVLGFPDTGGFFAVTNSQR QIANLEDFDGIRIRTMTLPSHQKIVQALGAEAYPLSWGEVYSGLQTGVIDGQMNPVPI ISFANFAEVQKHMTLTNHLFSPYTFMVNKAFYDGLTEAEQNTLHTAAESCVTASRGLS RIIEASDRGLAGLMDKIEVTALSSEQRAAMAGATQPAFETHVAENLDAKAGELLALFK SEVGKANDASYLD" /product="Putative ABC transporter periplasmic binding protein yiaO precursor." /transl_table=11 /note=", TRAP dicarboxylate transporter- DctP subunit, Bacterial extracellular solute-binding protein, family 7, dctP: TRAP transporter solute receptor, DctP family" /note="Conserved hypothetical protein" CDS 1859249..1860715 /locus_tag="Silicibacter_1720" /function="COG: Uncharacterized conserved protein" /translation="MRVFCASLATETNTFSPLRTDFSDFAQSFYAPPGEHPETPTLCS AVFPALRRRAKAEGFTLIEGTATWAEPGGLVSAATWEHLRDEVLGQLKAALPVDAVVL GLHGAMIADGCVDCEGELIAAARALAGPEAKIGVSFDPHSHLSAKRVDNADVITVFKE FPHTDFVEAGEACVELTLRAVRGEITPRISVFDVRMMDVLPTSIQPMRGFVDKIVELE ARAEILSGSVIHGFMAGDSPDLGAKVIVISDDDASKGDRIARELGLELFGFRGRTKPD FLPAAEALRRADTSSNTPVVVADVWDNPGGGVAGDSTILLREVLKQNLDGVAFGTIWD PMAVRLCFAAGEGATLDLRFGGKTSAHAGAPVDATVTVMRLQRDAVQSFGTSVVPLGD CAVIRIGDLDIVLNTNRSQTFSPDLFTNLGIDIAQKRIVIVKSTNHFHGAFAPVAGEI LYAAVDGPYPNDPARTDYTRLKRAIWPRVETPHAEETA" /product="MlrC domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1209 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1860715..1861770 /locus_tag="Silicibacter_1721" /function="COG: Predicted amino acid aldolase or racemase" /translation="MTLPIDTPAVLVDLNVAEANVRAFQSYCDRHSLKMRPHIKTHKL PQLAEYQIAQGAIGITCQKITEAEAMVAGGDMRDILITYNILGAEKVARLRALSERVA LSVVADNLTVVEGLSAGFAGANKPLPVLVECNTGADRCGVETPEAALALAQAIDAAPG LKFAGLMTYPPVGGAAKVTTWLAEAKARIEATDLTVEVISSGGSPDMWQAHEMPLATE YRVGTYVYNDRSLVTRGICTWDDCALTVLATVVSTPSATRAVIDAGSKVLTSDLLGLE GYGHVLGYPDFMIDQLSEEHGRITSAQPTGLRVGDQVRIVPNHACVVANMLDHITLMR AEEVAGQETVAARGQVW" /product="Hypothetical UPF0001 protein in pilT-proC intergenic region" /transl_table=11 /note=", Hypothetical UPF0001 protein in pilT-proC intergenic region (ORF1)., Alanine racemase, N-terminal, Alanine racemase, N-terminal domain" /note="High confidence in function and specificity" CDS 1861767..1862693 /locus_tag="Silicibacter_1722" /function="COG: Sugar kinases, ribokinase family" /gene="kdgK" /transl_table=11 /note=", [EC:2.7.1.45] , PfkB, pfkB family carbohydrate kinase, D_ribokin_bact: ribokinase" /note="High confidence in function and specificity" /product="2-dehydro-3-deoxygluconokinase" /translation="MNTPQILCLGEPLVEFNQTPEGPFAMGFGGDVSNVAISAARHGA QTGLITRVGDDPFGAALCDLWANEGLVTDHAARAQGEETGVYFVTHDASGHHFTYRRK GSAASRLTPQDLPMNALQTCPIFYASGISLAVSSSMQDAVIEAAQQARAGGGIFAFDP NLRVALWPLEVARETTHRCMQICDVALPGLEDARQLTGLHDAKDIASFYHELGPRIVA LTLGAEGVLISVEGTQRVLSGHRVDAKDATGAGDCFNGAFLATLLATNDPFSAAEHAN MAAALSTTGYGAVTPIPTLSQTRSALETAQRA" /EC_number="2.7.1.45" CDS 1862720..1863109 /locus_tag="Silicibacter_1723" /function="COG: Putative translation initiation inhibitor, yjgF family" /translation="MTIERIGAERTGAGGQNLPFSPATRAGDFVFISGQVAMNERGEI EPGGIEAQTKRTMENVIAVLAQAGCTLDDVAKVNVWLDDPRDFWTFNRVYASYFPNGA PSRSTVRSQLMVDAKIEIDVTAYKPLG" /product="endoribonuclease L-PSP, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2709 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1863194..1864531) /locus_tag="Silicibacter_1724" /function="COG: Periplasmic protease" /translation="MKKFAMAALGGTLAGFVATTYVAAPLLAQESNNTTVYEQLDLFG DIFERIRAQYVEEVDEKELIEAAIGGMLQSLDPHSSYLSPDDASKMRVQTRGEFGGLG IEVTQEDGFVKVVSPMDGTPADEAGVEAGDFITHVDGESLLGLGLDEAVELMRGPVGS EIIITIVREGEDEPFDVSIIRDTIKLTAVRGRTEGDSVVLRVTTFNEQTTPNLEAKLE EQVEALGGMDNVNGIVLDLRNNPGGLLTQAISVADSFLESGEIVSTRGRNPEDGERFN ATPGDLVGGKPIVVLINGGSASASEIVAGALQDHRRAIVVGTKSFGKGSVQTVMPLRS DGAMRLTTARYYTPSGRSIQALGVSPDIVVAQPRRRPEAEEDEPASSAFGPRSEADLR GRLNNDSLSEDEVRQIEADREKAEKAAELREQDYQLAYAIDILKGLSALGPKD" /product="carboxyl-terminal protease family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3812 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1864539..1865642) /locus_tag="Silicibacter_1725" /function="COG: Membrane-bound metallopeptidase" /translation="MALPVPAVAQDPGDAALEAAVALEEASERLDAAKSANDRVKALT ETVRAYEAGLQAMREGLRRVARRETQLTTQLKAREDEVADLLGVITTIETSTPPVLML HPSGPLGAARSAMMLAEVTPGLQARADALRNDLQEVRDLRHLQQSAALQLEKGLQGVQ AARAALSTAIADRQDLPKRFIEDPVQTAILISSTETLTGFADGLTLIAEASGVEPNGA DISDLRGDLPLPVEGLLLRGYGEQDAAGVARAGILVATRPRALVSTPTAATIRYLGPL LDLGNVVILEPQPDTLFILSGLAEVFGEAGQVIPEGTPVGLMGGEVAASSAILSLSGE GGGTGRSETLYIEVRMENSPVDPETWFRTGQGG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3811 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1865681..1867201) /locus_tag="Silicibacter_1726" /function="COG: Phosphopentomutase" /gene="gpmI" /transl_table=11 /note="identified by match to putative ortholog SPO3810 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="2,3-bisphosphoglycerate-independent phosphoglycerate mutase" /translation="MTTPKPVVLCILDGWGSAEPGPANAPYLAKTPTLDAIMQSCPTA RLVTHGPDVGLPSGQMGNSEVGHTNIGAGRVVAMDLGQIDLAIEDGSFYDNDALQAFI AKLKETGGAAHLMGLVSDGGVHGHVTHILAAIKAIRDAGVPVWLHAITDGRDVAPKSA LTYLDQLEAGMAPGAQIATVTGRYFAMDRDNRWERVSEAYDAMVKGAGQFTAATARDA VENAYGRDELDEFVKATVVEGFDGIKEGDGFFCLNFRADRAREILRAIGEPGFAEFDT GPRPALAALLGMVEYSEGHNAYMTTAYPKRAIVNTLGEWVAKQGKRQFRLAETEKYPH VTFFLNGGKETPEVGEDRFMPKSPKVATYDLQPEMSAPEVTAKFVEAIRAGYDLIVTN YANPDMVGHTGDLDAAIKACEAVDQGLGEVVAALKDAGGAMIVTADHGNCELMVDPET GGAHTAHTTNLVPVALVGGPEGTALKDGRLADLAPTLLALMGLDQPEEMTGESLLV" /EC_number="5.4.2.1" CDS complement(1867892..1868365) /locus_tag="Silicibacter_1727" /gene="yafP" /translation="MLMQIRPFEPRDAVDWARIFHTAVHEVGARDYTPEQCAAWSPEP APVDRVLERAQDGRRIWVAADTQDVAQGFIELEPDGHIDCFYLAPDVAGAGIGASLYA RLEHEARSLALASLFVEASEAARRFFLRQGFAEDHRRDFERRGVRIHNYAMSKTL" /product="Hypothetical protein Rv2669/MT2743." /transl_table=11 /EC_number="2.3.1.-" /note=", [EC:2.3.1.-] , GCN5-related N-acetyltransferase" /note="Conserved hypothetical protein" CDS complement(1868365..1869321) /locus_tag="Silicibacter_1728" /function="COG: ABC-type sugar transport systems, ATPase components" /translation="MEIPGARAAMTDEAIRIEALRKTYKGRKGQPEKHALKGIDLTVP RGSVFGLLGPNGAGKSTLINILAGLVLKTSGKVTIWGFDQDANPRQSRASIGVMPQEL NLDPFFTPRGALEVQAGLYGVPKSERDSDGILKLIGLEDKAEAYARTLSGGMRRRLLL GKALVHRPNILVLDEPTAGVDIELRQMLWENVRKLNAQGMTIILTTHYLEEAQEMCDE IAIINQGEVVARDSTANLLGRLDARAMVVQPAAPVTTLPEGPGIEAELRGDGAVVLRY HSNETSAEAVLEAVRAAGISIRDVKTEEADLEDVFLALTKSR" /product="ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3847 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1869365..1869547 /locus_tag="Silicibacter_1729" /translation="MTIEAPETKIVDSYRVACDGGEGALGHPRVYLQIPEDEGFVECP YCDCKYIHRDFEGKVA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3846 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1869601..1870086 /locus_tag="Silicibacter_1730" /function="COG: Multimeric flavodoxin WrbA" /translation="MAELLIIYHSRTGGSRQMAEAAYAGASSEGSARLVHAEEAGPED LRAASGYLFCAPENLAALSGAMKEFFDRCYYPVLGQLEGRAYAQMICAGSDGESAARQ LARIAQGWRLKPVQEPLIICTHAQTPEAILADKVIPEEELQMCRGLGQAMAAGLVMGM F" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0221 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1870154..1870687) /locus_tag="Silicibacter_1731" /translation="MFLSALSPIRRVTAITLLGLSGLLITSCQREASSSEAAAFLSGC TSNPGRSDHCTPLLACFENGQSIRGATFGWLSGNIEGKTQDGVACRGKWEILSTADAS GSAQFICEDGSYGNASFSYDRAKPGTIWGRGELNASEAFQVWGGWDLIQRLQSAGGHF DQLCDALNGLKERRSAL" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 1870718..1873525 /locus_tag="Silicibacter_1732" /function="COG: DNA polymerase I - 3'-5' exonuclease and polymerase domains" /gene="polA" /transl_table=11 /note="identified by match to putative ortholog SPO3844 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="DNA polymerase I" /translation="MSTSNFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVS GFCNMLFKQVEDNKGPDAPTHVAVIFDHSGKSFRNDMYDQYKANRPPAPEDLVPQFPL TREATRAFNIACKEIEGFEADDIIATLACQAREAGGRVTIISSDKDLMQLVGDGVEML DAMKNKRIDSDGVREKFGVGPDRVVDVQALAGDSVDNVPGAPGIGIKTAALLINEFGS LEDLLDRAEEIKQPKRRQTLIEKRDQIEMSKRLVQLDCDMELDFTLDDLEVRDPDADT LLGFLAEMEFRTLSKRMADQLGREAPTIPEAPSAAAAALELPEAPGFDSAEYTTVRDA ETLQQWIDLIREHGYVAVDTETTGLNEMIADLVGISLCVVPGQACYVPLTHKTGNSDD LFGSDDLAEGQMPLKDALEMLKPVLEDDAILKIGQNMKYDAKIFARNGIDVTPIDDTM LLSYALHGGMHGHGMDTLSERYLDHQPIPIKSLLGSGKSAITFDRVSIEDATPYAAED ADITLRLWQQFKPQLHQKQVTTVYETLERPLVPVLAQMEQHGIKVDRDTLSRMSNAFS QKMAALEAEIHELAGETFNVGSPKQLGEILFDKMSLPGGKKGKTGAYATGADILEDLA TEHTLPARVLDWRQLSKLKSTYTDALQEHIHPETGRVHTSYLQTGANTGRLASSDPNL QNIPVRSEEGRRIREAFVADEGNVLLSLDYSQIELRILAHVAGIDALKQAFADGHDIH AMTASEVFDVPLEEMTPDIRRKAKAINFGVIYGISGFGLARNLRIPRGEAQGFIDRYF ERFPGIRQYMDDTVNFAKEHGYVQTLFGRKIHTPEIAAKGPRASFAKRAAINAPIQGT AADVIRRAMVRMPEAIAHLPARMLLQVHDELLFEVPEDHVEETISVAREIMEGAADPA VHMDVKLVVDAGRGQNWAEAH" /EC_number="2.7.7.7" CDS complement(1873694..1874461) /locus_tag="Silicibacter_1733" /function="COG: Hydroxypyruvate isomerase" /translation="MPKFAANLSMLFAELPYLDRFSAAAAAGFEAVEVLFPYEFAAKE TQRALLANGLELLLINAPPPNYTGGDPGYAAVPEQAERFQRDIRRVLRYADMLKAGRI HIMAGPAKGEAARRTFVQNLQAAAESAPQQQFTIEPLNSGDFPGYFLDDYNLAIDILD EVGRDNVTLQFDAYHAQLIHGDALKVWETFGSRASHVQFAAAPSRCEPGRGPVDFDAL FQAIDDSGYSGWVSAEYTPSTPRTEDSLRWMKALQTA" /product="hydroxypyruvate isomerase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2563 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1874680..1875273) /locus_tag="Silicibacter_1734" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MAKRMSGQKVVKPDADALEVSAKAAGDGGLPPVHLWNPPYCGDL DIRIHRDGRWSYLGSEIRRFELVKLFSSILKREADKFYLVTPVEKVGITVEDAPFVAV DFEAAGVGKEQILTFTTQVGDETLAGPENAIRVETDPETGEPAPYVHVRAGLEALVDR KSFYRLMELGETHDGWFGVWSQGAFFRIIKADALDLT" /product="hypothetical protein" /transl_table=11 /note=", Uncharacterised conserved protein UCP029557, Protein of unknown function (DUF1285)" /note="Hypothetical protein" CDS 1875326..1876333 /locus_tag="Silicibacter_1735" /function="COG: MoxR-like ATPases" /translation="MSEAQDLLTDIEALEVRLQDARASIKRRFIGQERVVDLTLATLL CGGHGLLIGLPGLGKTRLVEALSTVMGLNGNRVQFTPDLMPADILGSEVLDTAPDGTR AFRFVQGPIFCQLLMADEINRASPRTQSALLQAMQEKTVTVAGADRALDAPFHVLATQ NPIEQEGTYPLPEAQLDRFLMQIDIHYPDRETERDILIATTGVEEEAAHQVFTAEELI AAQTLLRRMPVGESVVEVILDLVRAFRPEDPAASERVAQTVAWGPGPRAAQALMLAVR ARALLQGRLAPNTEDVIDMARPILSHRMQLNFAARARGDSLAELIDETAASLVKAEAA A" /product="ATPase, MoxR family" /transl_table=11 /note="identified by match to putative ortholog SPO0139 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1876330..1877238 /locus_tag="Silicibacter_1736" /function="COG: Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)" /translation="MSLPLASPDRTARGPAGQIRSRAEEAASVLPPLLVQAQQLAGAV LLGEHGRRRSGVGDDFWQYRPVQQGDSRRMIDHRRSARGDQQFVREREWQIAQTVHLW VDQGQSMRFASDGKLPQKIDRARLLALASAVLMVRGGERVGLTGGLLPPRRGNMQILR LAEHFTTQDDATYAPPEHRALIPHARALFISDFLGPFEELEIALSKAADRGLRGVLLQ VLDPSEELFPFAGRTRFEGPHKAHVHETLKASALRDRYLERLAQRRDALETLCRAAGW TLGLHHTGDSAQSGLLWLYHALERRQ" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0138 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1877235..1880024 /locus_tag="Silicibacter_1737" /translation="MTMIAGIGFASPWLLLGLLVLPILWLLLRAIPPAPKRQPFPAVT LLLGLKDDESLSDRTPWWLLLLRMLAVAAAIVGLSGPVLNPAQEQSGDGPLLIVMDSG WGGAPHWEQNRSHIEAELSEAGRAGRPVALLRLTEPEPLQFRAAGYWGRQLPGMTPAP WVASPEQVRAAMDLIAEVEGGFDTLWLSDGLAMAARQDLVTALGERGNIEVYESGAPV IGLLPATYADGAITLSAQRSNTGLTQEITVQALGPDPNGTERALASTTITFDAAASAA ETQIALPMELRARISRFEILNTRSAGAVSLTDDRLRRREVALISAQSEDEGLALLSAL HYLRQALEPTAELLEGSLTDLLPANPDVVVLADVARLAPAQEEALIDWVESGGLLLRF AGPRLAASDTARDTEEPLMPVRLRIGGRSIGGAMSWGEPKALAPFAEGSPFYGLDIPQ DVAVSSQVMAQPDPELASRVVAELSDGTPLVTRKPLGQGQVILFHVTANAEWSSLPLS GLFVDMLERLAVSSASKPPSADDLEGTTWQAVEVLDGFGRLTDADTLSGVAGPDLIDA PSGPTLQPGLYTSGSGAYARNVLRDGDGIEPSIWPASVPVLTYEGAAERPLGGLLLSL ALVLLAVDIAAALWVSGLWSPAKVATIALGMGLAGSGFIALPPAAQAQMATPLNLPSE TELTSELTLGHVLTGDARVDQIAAEGLRGLSNVMTLRTSVEPAAPYGVDLETDELAFF PFLYWPVTEGQPLPSSEAYSKLNAYLRTGGMILFDTRDADLTQTGASSGAARRLQQLA LPLDIPPLEPIPADHVLTRAFYLLQDFPGRHPRGQIWVEAAPPDAKQVDGLPFRNLND GVTPVVIGGNDWAAAWAVDERNSPLYPVGRGFSGERQRELARRFGVNLLMHVLTGNYK SDQVHVPALLDRLGQ" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0137 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1880070..1882112 /locus_tag="Silicibacter_1738" /function="COG: Uncharacterized membrane protein" /translation="MTQTILFDPLVPLALLAVLAGLSVLAMALAIWRRLAGWALRAGA ALVLLAALSGPVIQVEDRSPLSDIVIVAEDRTASQTLSDRPDQMAAARTELEAALAKR ANTDVRWIAVEDSPDDGGTQLMDALTRALADEPRARVAGLIALSDGQVHDMERAPELP APLHLLMTGRDSDWDRRLIVRNAPSFGIIGEPITLTLRVEDQGAAPEGLQSTELQIAI DGGAAQSFRLPVGVDFDLPLTLPHGGRNVIEFRVPEAEGELTTRNNAALLQINGVRDR LRVLLVSGAPHPGGRTWRNLLKSDSAVDLVHFTILRPPEKQDGVPVDELSLIAFPTRE LFLEKIEDFDLIIFDRYKRRGILPSAYLENVANYVRRGGAVLVAAGPDFASADSIFRT PLAEVLPARPSARVLEEPYRPVISESGLQHPVTAELTGAESWGRWMRQVELDTTGGVT LMHGVGERPLLTLDRVEEGRVALLASDHAWLWSRGYDGGGPQLELLRRLAHWMMKEPE LEEEVLTAEATGQRMRIERRTLGETVGPVTITAPDGTTSEIALRQQRPGLWEGRYESD QIGLYHLEEGEERTVIGLGPAAPREFEQTIATADLVGPLVRSLRGGTVALEDGMPSLR NIREGRPAAGRGWIGLVPRGAYETTAVTQSPLLPSWFLLLLAATLMIGAWLREGRS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0136 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1882311..1883213) /locus_tag="Silicibacter_1739" /function="COG: 2-keto-4-pentenoate hydratase" /translation="MRWLEEKRGISLRTSGLVGILTMSVALTLGTDIARAECASEEEV AQFVSAYVDRQPATALGAGGSMVDALCTQARVAEALSEHFGPVIGYKAGLTSAAAQAR FEASEPVRGVLYRDMMLESGATIEMPWGTVPMVEADLVLEIGDSAVNWATTPEEVMQN IKSIRPFIELPDLALAPGEPMTVETITAMGVGARKGVLGAEVPVTDPTALTAALAEMT VTLRDGTGDTVVSASGTAVLGHPAETILWLHEVGVTFKAGDLVSVGSFGPLVPPADLR GGASVIYMGLPGDPEVSIRFAPTS" /product="hypothetical hydratase/decarboxylase" /transl_table=11 /EC_number="4.2.-.-" /note=", [EC:4.2.-.-], 4-oxalocrotonate decarboxylase (EC 4.1.1.77) (4-OD)., Hydratase/decarboxylase" /note="High confidence in function and specificity" CDS complement(1883213..1885393) /locus_tag="Silicibacter_1740" /function="COG: Membrane carboxypeptidase (penicillin-binding protein)" /gene="pbpC" /translation="MITPDWLRLQRAPAERRAHQTSAAPGRVLTDRSVGSVAGPHRRW RSPLRLPLLGLLIAAVIAGKALDQWVEDTRLPQTLAETSVEVRDRHGRLLRAFPVEDG IWRMAVRSEEVDPTYLRMLRAYEDKRFDTHFGVDPVAMLRAFGQAVWNGRTVSGGSTL TMQVARLLEDGPTGRWSGKLRQIRVALALERKLSKTEILNLYLIHAPFGGNLEGVRAA SLSWFGKEPHRLTAAEAALLVALPQSPETRRPDRSVSAAREARRRVLNRSQDAGVLTT EVAHLAAVAPLPDRRRAFPLLAPHLSDQLRATAPAQARFDTTLDAMLQARLQAVLSRR VKVSGARLSAAMIVADHQSGEILVRIGAPDYTDTARRSYVDMARAVRSPGSTLKPLVY GLAFDDGLAHPDTLIRDAPVSFGGYAPQNFDGAFRGDVRVRDALQMSLNTPVVTLTEA LGPSRLMAAMRQVGMRPQLPSGKPGLAVSLGGVGVSLHDLVQMYAVVAAGGTAPRLTS ETGAAREKTPRVMSPVAAWYLGDILRDAPAPAGARGGMLPYKTGTSYGHRDAWAVGWD GRHVIGVWLGRADGTPVPGVFGAELAAPVLFEAFAVLKPEIDPLSPPPSNALVLETAE LPAPLQRFRARSETFSEAGAGAPEVLFPPTHARLSLVEGRMALKLRGGRLPFTVLANG VPVAQGLRSRDLDLPSPGPGHATLVVIDADGQSARVTVEIEETG" /product="penicillin-binding protein 1C" /transl_table=11 /note="identified by match to putative ortholog SPO0135 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1885390..1890837) /locus_tag="Silicibacter_1741" /function="COG: FOG: TPR repeat" /translation="MQRLLILLVFLFSNVLGSVAIAQTSESKPLPAHRFVTQPDTDHF GADLQALFDTSLEACQRACATQGACVGFVYNLKSNACFPKSELSAPSTFVGALTVRKV PVDSDLAARAADRASRLPLRGGNDLSAARTLASDIGSRYPLSGRDLGVLVDGSQQFFA GNNATMAARWMGEAVALSDAPDLWVEYARFVRAIPTDRSSETRRNLAEAASAALNGYL RADAAPLQATALTEAALALEKLGRGRDMVSMLRLAQDIAPRQDIAALLDRAVAKYGFR VSDTRVEADSADPRICIVFSEELAQTGVTYGDYLKSDAKGLAAEASGQELCLTGLTHG QHLRVTLRRGLPAANGEALVKDVDLRHYIRDRSPSVRFPGRAYVLARSDVTALPVETV NVDMLDLKLSRVSDRNLLRSMQDDLFARPLNQWQSENFDATLAEVLWSGTAEVQQELN RDMTTRLPLNDVLADQPVGIYALSASIPGADPYDSPAAMQWFVLTDLGLSSMSGADGL HVQVQGLSDAKARAGVEVELISEANAVIARATSDVTGYARFAPGLTRGTGSAAPAMLL ARAGEEDFAFLSLRDAGFDLSDRGVEGRPAPGPVDVFLTTDRGAYRAGETINVTALSR DPRAQAIEGLPLIAVLKRPDGVEYSRHISDGGSAGGHVFALPVGDSVPRGSWSVEIYT DPKADPLARQTVLVEDFLPERIDFEQEIRDVARLRPGGQMVVDVKARFLFGAPGAGLS VEGDVSLSPVRQLSDWPGYRFGRYDAETTRQTRYFSADDTDAQGRAVATGDLPDIEAA GLPLEARLRLRLADGSARPVERAQTVPVRPATPVIGLKAQFADDVVAEGTEAGFELVA LGPDLSPMPMQVQWVMNRVETRYQWYQLYGDWQWEPITRRTRVASGEAMLGSEPVAIT APVDWGRYELVVERLDGEYVTAAQDFYAGWYVPASDAQTPDRLELSLDRESYAPGDTA RLRIVPQTAGTALISVMGSELIHRQAVAVKAGENVIPLEVTSEWGSGAYVSASVVQPV ASREGRTPTRALGIAHATVAQPGQELDVAITVPEITRPRQTIEATVKVAGADAGEEVW LTLAAVDVGILNLTGYQSPDPVGYFHGQRRLGMELRDIYGRLIDPGNGALGRVRSGGD AGLGGQFQSPPPTQDLMSVFHGAVKVDETGSLRLPITLPDFNGTVRLMAVAWTDRSVG QAEADMVVRDPVVLTASLPRFLAPGDQSRIRLDITHADGPAGEVGLAVDVRGAGVRLG AVPASVGLAEKGRVILEVPVTADAVGDPELRLSLTTPGGAVLEQMLRLPVRANDPEVS ETRRFSLASGDSFLFNADVFEGLRPGSARAVMSAGPLAKFDVPGLLAQLDGYPYGCTE QVTSKALPLLYLSSVADAAGLGDRPKVDARINSAIRKVLTRQAANGAFGLWRAESGDL WLDAYASDFLSRARAKGYVVPDQAFARAMDNLRNRLNYAPDFDNGGEEIAYALLVLAR EGAAAMGDLRYYADVKAEAFSTPMGAAQLGAALAAYGDQRRADKMFARAAQMIAGQGA EQPLWRVDYGTQLRDTAAVLALAVEAGSAAVNRDYLTARVADSDGLRSTQEAAWSLLA AQALVDAPEDSGLRVNGQPVAGAFVEVMAGGSPKELSVTAASGRSTDITLTRIGVPVV PPAARGYGFALTREYYTLEGAPVDLTEVDVGTRLVTVLRVLPQEDIGARLMVNDPLPA GLEIDNPNLLRSGDLRDLDWLSLWDADHAEFRSDRFLAAVTSRGTDPITLAYMVRAVS PGSFHHPAASVEDMYRPAYRANTAAGRLQVR" /product="PAN domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO0133 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1890989..1893274 /locus_tag="Silicibacter_1742" /function="COG: Signal transduction histidine kinase" /gene="pleC" /transl_table=11 /note="[EC:2.7.3.-], Aerobic respiration control sensor protein arcB (EC 2.7.3.-)., Histidine kinase, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, homology to pleC, belas" /note="High confidence in function and specificity" /product="hybrid sensory histidine kinase" /translation="MSLAEKLAQERRARLAAERLLELKQAELTDANRKLGRHALALTK RIGATQAEIATFKNENEKVKSDLNTANEKVEQAERRLWHSIQAFQDGFAFFDSDSKLI GANTAYLNIFEGVEEVSPGVSYVRILQILTDEGLIDTEELSADSWRAMMTERWMSPAP EPTVVRLWNDRYLKLIDQRGHDGDIVSLALDITATVHYEEELRSARERAEAANRAKSA FLANMSHEIRTPMNGVVGMAELLSDTTLTEEQRLYANTIKNSGEALLVIINDVLDYSK IEADKLALHPEAFDLEACMHEVVMLLQANARDKGLTLLVDYDLFMPTNFIGDPGRIRQ ILTNLIGNAIKFTNEGHVTARVTGVPHPEDNTVMLHISIEDSGIGIPDDKIQHIFGEF NQVEDETNRQFEGTGLGLAITERLIKLMDGEIWVESQLGKGSCFGFRLPLVVADGSQV NAPELPENLNCVMIVDDMDINREILNRQLQRLDLKVVAVTSGAEALDVLNAEIDLVIT DRNLPGMDGLKLARSLHHASPQTPVLLLSSDPADGSDPALSDLFAGILQKPIPRGALF RALSKLDAPSVHPARPQDVPPAAPAIEPPSDAPVQVPAPEAGVDFGSGATIASDLRRM RVLAAEDNRTNQLVFRKMVKDMNIDLRFAGNGLEAVELYQSFKPDMIFMDISMPKMDG KEATQAIRELEKENGRRVQIVALTAHAMDGDSEGILAAGLDDYLTKPLRKSVIHDRIM KNMPTAVAPLQGEGDDLQATG" /EC_number="2.7.3.-" CDS complement(1893319..1894677) /locus_tag="Silicibacter_1743" /function="COG: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes" /gene="lpdV" /transl_table=11 /note=", [EC:1.8.1.4] , Dihydrolipoyl dehydrogenase 3 (EC 1.8.1.4) (LPD-3) (Dihydrolipoamide dehydrogenase 3)., Dihydrolipoamide dehydrogenase, Pyridine nucleotide-disulphide oxidoreductase, lipoamide_DH: dihydrolipoamide dehydrogenase" /note="High confidence in function and specificity" /product="dihydrolipoamide dehydrogenase" /translation="MTDIKRKVLVIGAGPGGYVCAIRAGQLGLDTVIVDEARPGGTCL NIGCIPSKAMIHAADEFYKMTHAGAGPLGISAAGPTIDLEQTVAWKDGIVERLTGGVG GLLRKAGVKMISGRARFVDGKTVTVAGDEGEIQIRADYIVIATGSAPVELPFLPFGGA VMSSTEALSLTEVPESLAVVGGGYIGLELGTVFAKLGSKVTVVEAEDRILPLYDKALT RPVHKRLEELGVTVMTGTKAQSHEGGALQTDAGEIAAERVLVTVGRRPRTQGIGIDEL SLTMNGPFIRIDKVCQTSMRGIYAIGDVTGEPMLAHRAMAQGEMVAEYLAGQAVEWDK RAIPAVCFTDPEIVTCGVLPGEVEGTKSAEFPFVANGRAMTTERDEGFIRVVWREADN AVLGLQGVGVGISELSSAFSLAIEMGACLEDIAATIHAHPTQSEGLQEACLKALGHAL HI" /EC_number="1.8.1.4" CDS complement(1894678..1895943) /locus_tag="Silicibacter_1744" /function="COG: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes" /gene="bkdB" /transl_table=11 /note=", [EC:2.3.1.12] , Dihydrolipoyllysine-residue succinyltransferase component of 2- oxoglutarate dehydrogenase complex (EC 2.3.1.61) (E2) (Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex)., Catalytic domain of components of various dehydrogenase complexes, 2-oxoacid dehydrogenases acyltransferase (catalytic domain), PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase" /note="High confidence in function and specificity" /product="branched-chain alpha-keto acid dehydrogenase (lipoamide component)" /translation="MGIFAIRLPDVGEGIAEAELTEWHVKPGDIVKEDDVLAAVMTDK AAVEVPSSVEGKVVELGGEIGDMLAIGCVLVRIEVDGEGNEAASVAEPEPTPAPKEQK AEPEPERGDKPAEPARPVVKTGKPVARAKNTKPLAAPSVRARAREEGVDLRQVPGSGP GGRISHGDLENWIASGGIQQGSVKRGKNTGVEDVRVVGMRRKIAEKMAISKRQIPHIT IVEEIEMEALEDLRAALNRKYKDQRPKLTLLPFLMRAIVEAVREQPELNARYDDEKGI IHRHGGVHVGIATQTPNGLNVPVVHHAEAGSLWDNAAELARLAEAARDGSIKRDELTG GTITITSLGALGAIATTPIINHPEVAIVGVNKMQMRPVWDGQQFQPCKMMNISCSFDH RVIDGWDAAVFVQKLKLLLETPAMLFVEG" /EC_number="2.3.1.12" CDS complement(1895948..1896961) /locus_tag="Silicibacter_1745" /function="COG: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit" /translation="MAQMTMIEALRDAHDVAMEKDDRVVVYGEDVGYFGGVFRVTAGL QAKYGKSRCFDTPINEAGIVGTAIGMAAYGLRPVIEIQFADYVYPAIDQIVSEAARLR HRSAGDFTCPIVIRMPTGGGIFGGQTHSQSPEAFFTHSSGLKTVVPSNPSDAKGLLLA AIEDPDPVIFLEPKRLYNGPFDGYHDRPVTSWKKHPLGDVADGYNPIPLGKAAIRRKG NDVTVLAYGTMVYVAEAAAEESGVDAEVIDLRTLLPLDLETIVASVEKTGRCVIVHEA TKTSGFGAELMSIVQENCFYSLEAPIIRVTGWDTPYPHAQEWNYFPGPERVGEALKKC MED" /product="2-oxoisovalerate dehydrogenase beta subunit" /transl_table=11 /EC_number="1.2.4.4" /note=", 2-oxoisovalerate dehydrogenase beta subunit (EC 1.2.4.4) (Branched- chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta)., Transketolase, central region, Transketolase, pyridine binding domain" /note="High confidence in function and specificity" CDS complement(1896963..1898204) /locus_tag="Silicibacter_1746" /function="COG: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit" /translation="MSDNETYAPLALNVPEPGCRPGDTPDFSYFEVPRAGAVARPSVD VDPDDMREMAFSIVRVLNKEGEAVGDWAGTLSPEELREGLRDMMLLRAFDARMLNAQR QGKTSFYMQHLGEEAVSCAFSRALKDGDMNFPTYRQAGLLIARDYPLVTMMNQIYSNA DDPLHGRQLPIMYSSKEHGFFSISGNLGTQFVQAVGWAMASAISGDTKIAAGWIGDGS TAESDFHAAMVFASTYNAPVVLNIVNNQWAISTFQGIARGGVGTFAARGHGFGIASIR VDGNDYLAVNAVAKWAAERARLGLGPTLIEHVTYRAGGHSTSDDPSAYRSADEGAAWP LGDPIDRLKRHLIRIGEWSEERHSQAEAELMDQVITAQKEAEKVGTLGGGKGPSPRDM FEGVFEKMPPHLIRQRQEAGY" /product="2-oxoisovalerate dehydrogenase alpha subunit" /transl_table=11 /EC_number="1.2.4.4" /note=", [EC:1.2.4.4] , Probable pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A)., Dehydrogenase, E1 component, Dehydrogenase E1 component" /note="High confidence in function and specificity" CDS complement(1898201..1899271) /locus_tag="Silicibacter_1747" /function="COG: Glutamate dehydrogenase/leucine dehydrogenase" /translation="MTLNLTEETAPEGYERLVFAQDPESGLQAFICVHSTVLGPAAGG CRMWNYATVDEARMDVLRLAEGMTSKNAMADLALGGGKSVIVGNPQSDKSPALLRAFG RAVQSLDGSYYTAEDVGISPDDMKIVAEETPYAVGLEDGAHGTGDPSPFTAQGVFQCL LVGAEVVFGTSDLSGRRVLVQGLGHVGMSLAEKLYGAGAELIVADINEAALQHAKTAF GATICDPAEIFETEMDIFAPCALGGVLTEATAQKLSAKLVCGAANNQLETPEVADALR ARGIRYLPDYVVNAGGIISVAGEIHKAGTSYRTERLDGVAARIRTLVDLSDKTGRTTT AVADDMVADILAKASNTARGAA" /product="glutamate/leucine/phenylalanine/valine dehydrogenase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0390 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1899460..1899858 /locus_tag="Silicibacter_1748" /function="COG: Transcriptional regulators" /gene="lrp" /translation="MSLVQLSERVGLSATPVKRRLRQLEDSGLIEGYVARIDRKAAGF GITAFVSVELEKQDAEAVASFQRKVARFEEVVTGSLMTGAQDFLLEVVVESLEEFETF LQTKLMRVEGLRAVRSRFALRKFIDRARIP" /product="Putative HTH-type transcriptional regulator ybaO." /transl_table=11 /note=", Bacterial regulatory proteins, AsnC/Lrp, AsnC family" /note="Conserved hypothetical protein" CDS complement(1899943..1901139) /locus_tag="Silicibacter_1749" /function="COG: Alcohol dehydrogenase, class IV" /translation="MASGGSAPTPAHHRNMLMSLIGNWSYPTAIKFGAGRIKELADAC AQAGIKKPLLVTDKGLADLPVTQSTLDIMEAAGLGRGMFSEVDPNPNEKNLDAGVAAY KAGGHDGVIAFGGGSGLDLGKMVAFMAGQTRPVWDFEDIGDWWTRADADAIAPIIAVP TTAGTGSEVGRASVITDSATHQKKIIFHPKVLPTVVICDPELTVGMPKFITAGTGLDA FAHCVEAFSSPHYHPMSQGMALEGMRLVKDYLPRAYADGTDIEARAHMMSAAAMGATA FQKGLGAIHAMSHPIGAHFNTHHGTTNAVCMPAVLEFNASEISERFDMAAAYLGIEGG FEGFKAFVQEFNDSLGIPRGLSALGVTEESIPELVKGAIIDPSCGGNPVKLTEENLTQ LFKAAL" /product="alcohol dehydrogenase, iron-containing" /transl_table=11 /note="identified by match to putative ortholog SPO2609 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1901182..1902564) /locus_tag="Silicibacter_1750" /function="COG: NAD-dependent aldehyde dehydrogenases" /translation="MGKTLNCISPIDGSVYASRETLDLDAARSEVAAVRSAQKAWAAR PLQERIDLVMAGVAAIGEMNDEIVPELAHMMGRPVRFGGEFGGFNERASHMAQIAAES LADIEVGEDATFKRYIKRIPHGVVFVVAPWNYPYMTAINTVAPALIAGNTVVLKHATQ TLLVGERMAKAFHAAGVPEDVFKNVFLDHDTTSALIAEKAFDFVNFTGSVGGGQAMER AAAGTFTGVGTELGGKDPGYVMEDADVDAAVDTLIDGAMFNSGQCCCGIERIYVHESL YDAFVEKALAVVNGYKLGNPLDAETTIGPMANVRFAQEVRDQIAEAIEQGAVAHIATM DADDGGAYLTPQILTNVTHEMRVMRDESFGPVVGIMKVSSDEEAIKLMNDSDFGLTAS IWTKDLERAQAVGDQIETGTVFMNRADYLDPGLCWTGCKNTGRGGGLSVIGYHNLTRP KSYHLKKVTA" /product="aldehyde dehydrogenase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2608 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1902667..1904019) /locus_tag="Silicibacter_1751" /function="COG: Glutamine synthetase" /translation="MTFEDLKEQIAAGQVDTVLVCIVDMQGRLMGKRFHAEAFLEMAD GETHCCNYLLATDLAMATPDGYASTSWERGYGDYIMKPDLTTLRPVPWLEGTAMVLCD VIDHHTHAPVAHSPREMLKAQIARCEALGLSPVMATELEFFLFKGTHDEIAAGGFNKL EPISTYNEDYSIMQTSKEEPVMRPIRNHLRAMGLPIEGSKGEAEAGQEELNIKYDAAL ATADHHTIAKHGIKEIAHQQGFAATFLPKWHHERVGSAAHVHQSLWKDGGNAFFDESA PLGKSKLMDHYMAGLLKYAADYTYFMAPYINSYKRFAKGTFAPTQVVWSVDNRTAAFR LCGDGTKGVRVECRVPGSDMNPYLAQAAMLAAGLKGIEEKLELQDPFNGDAYAGDTQQ HIPRSLLEARKALLGSEMLREAFGEDVITHYARAAEWEIEEFNRVVTDYEVARGFEKA " /product="gamma-glutamylisopropylamide synthetase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2607 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1904095..1905129) /locus_tag="Silicibacter_1752" /function="COG: TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component" /translation="MTTRRNFLKTTALGAAAAPLAAPALASGKITWRMQTYAGPALAA HVIDPAIEMFNKIAGDRMQIELFYADQLVPTGELFRAMQKGTIDAVQSDDDSMASPTE VTVFGGYFPFASRYSLDVPVLFNQYGLNEIWDAEYSKVGVKHISAGAWDPCHFATKDP INSLEDLKGKRVFTFPTAGRFLSQFGVVPVTLPWEDIEVAMQTGELDGVAWSGITEDY TVGWADVTNYFLTNNISGAWAGSFFANMDRWNELPEDLQALFRVCTDQSHYYRQWWYW GGEASLRVNGDKMKLTSIPDAEWQQVEDAAVKFWDEIAAESETKAKVVEIFKKYNADM AKAGRPYRYG" /product="bacterial extracellular solute-binding protein, family 7" /transl_table=11 /note="identified by match to putative ortholog SPO2606 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1905184..1906503) /locus_tag="Silicibacter_1753" /function="COG: TRAP-type C4-dicarboxylate transport system, large permease component" /translation="MSQEYIAIFMFASMMLMLFTGQRVFGAIGAVGAVAALLLWGVGG YDIPFSAAMKLMKWYPLLTLPMFIFMGYVLSESRLADDLYKMFHVWMGPINGGLAIGT IGLMVLVSAMNGLSVAGMAIGATIALPELLRRGYDKTMVTGVIQAGSSLGILVPPSVV LVLYAMIARQPVGQLWLAGVIPGLMMAGLFIIYIWLRCKANPALGPAMEDAHEVPRAE KLRLLGSGALPLLIFAAMMVPFVNGWTSLVESSAIGALTALAASIAKRRMTWKIFESC TKNTLAISCMFMWIILAALGFGAVFDGLGAVKAIDSLFTEQLGLSPWVILILMQLSFI IMGTFLDDTAMLVIVAPLYVPLVAALGFDLVWYGVLYTITTQIAYMTPPFGYNLFLMR AMAPPEISLTDIYRSIVPFVAIMVVALAIIMVFPQIALWLPETIYGQ" /product="TRAP dicarboxylate transporter, DctM subunit" /transl_table=11 /note="identified by match to putative ortholog SPO2605 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1906500..1907087) /locus_tag="Silicibacter_1754" /function="COG: TRAP-type mannitol/chloroaromatic compound transport system, small permease component" /translation="MIGAMLGYVRVVDAVNYRIGRLMMWGLFVMMGILLWSSISKTFF LPSLWTLEMAQFAMVTYYILGGPYSIQIGSNVRMDLFYHNWSTRRKAWFDAFTVLALI TYLAILFYGGLGSTAYSLGYWGDNPFAFFWGLITGAEEVGHMERASTAWRPFIWPIKS IMVFGFFMMLLQAISELFKDIARLKGYDIPSERPS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2604 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1907084..1907857) /locus_tag="Silicibacter_1755" /function="COG: Predicted N-formylglutamate amidohydrolase" /translation="MLHMNTDTFAFDFGPSFAKTPSAAEAEVIIVCEHAANWIPPSLD ALGLDDAARDSHIAWDPGALGVARKLAELLKGPLVEGCISRLVYDLNRPPESPTAIPP ASEIFDVPGNRDLSDAARAQRVEAVYEPFRAALAEEIATRESALRLMVTVHSFTPVYN GETRAVELGLLHGRDDRFAKAMLAHQPEGLAWDVRLNEPYSASDGVAHTLDVHGCDNG LLNVMLEIRNDLIATPAQQDAWATALAPWIRATLEDAAV" /product="conserved hypothetical protein" /transl_table=11 /note=", N-formylglutamate amidohydrolase, N-formylglutamate amidohydrolase" /note="Hypothetical protein" CDS 1907962..1908819 /locus_tag="Silicibacter_1756" /function="COG: Transcriptional regulators" /translation="MPTIAEKLKSRESDLTRAERQLSAAILDNYPIPGLGSITELAEL AEVSTPTVARMVQKLGFSGYPEFQHALREELREIISNPVEKRAEQAPELPEGHMLNRY AVAVYDNIRATLENVNLEEFDTLCALLADTNSRVHIAGGRLSGTLAQNFYLHLQMIRR DVFMIPPRASWTHSVLDLLPGDTLILFDIRRYENATLLLAEMAHERGVKVVLFTDQWR SPIQKEATFTFAARIAVPSAWDSGVALLLLIESMIAKIQEDHWDTVKARNDELEAAFD RTRLFRKFT" /product="transcriptional regulator, RpiR family" /transl_table=11 /note="identified by match to putative ortholog SPO2602 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1908883..1910037 /locus_tag="Silicibacter_1757" /function="COG: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II" /translation="MTARKDRFHLSPETRILTPEVAGLAELLHALREGQSILAQPGAV PIQAQAEQTQWLYCKSSGSTGYAKTIRRSPESWIRSFEMDRELFALGARDTYASLGNL SHSLTLFAAVAACQIGADLAMLGDCGPREQLSRLGEFHASVLYATPAQLRLLRRAAGK RQLEGLRLLFSSGGKLDHETRAGLQQLFPGAQVIEIFGATETSYMTIAGPDALEGSVG QAYPGVEIRIDSPDANGVGEIWIRSPFVFDGYVKGESQETRWNNGWLTIGEMGRLDES GNLFAKGRKNRMVTVADKNVFPEEIEAVLMSVPEVEIAVVCAVPDALRGHVIHAAVQG EASPAALRQLCRHQIGDHAVPRSIRRVAKIPMLTAGKPDLQALRDLWDDL" /product="Acetyl-coenzyme A synthetase 2" /transl_table=11 /EC_number="6.2.1.1" /note=", Acetyl-coenzyme A synthetase 2 (EC 6.2.1.1) (Acetate--CoA ligase 2) (Acyl-activating enzyme 2)., AMP-dependent synthetase and ligase, AMP-binding enzyme, menE: O-succinylbenzoate-CoA ligase" /note="High confidence in function and specificity" CDS 1910037..1911140 /locus_tag="Silicibacter_1758" /function="COG: Acetyl-CoA acetyltransferase" /gene="mmgA" /transl_table=11 /note=", [EC:2.3.1.9] , Acetyl-CoA acetyltransferase (EC 2.3.1.9) (Acetoacetyl-CoA thiolase)., Thiolase, Thiolase, C-terminal domain, AcCoA-C-Actrans: acetyl-CoA acyltransferases" /note="High confidence in function and specificity" /product="acetyl-CoA acetyltransferase" /translation="MPSIVSARRTAVIPRGGAFAALEPHELAAPVIRACLEDAGLAGD EVGELILSNALGAGGNPARVAALAAGLPDHVAGLSIDRQCAGGLDAILLGHALVQAGH HEVVIAGGAESYSRRPQRSRTFADGRPPEPYAQARFTPWPDRDPDMAVAAADLARMQH ITRAEQDDWAQRSHALASLHEARRAEEIVSINGAVKDSFTRTLTARHCARAKVVTGDI TAANMAVAADAAAFVVIVSEKIARRLRTRGLSLIAGATLGADPEQPGLAPLPAIQKVL TQAQIERTDLCRAEIMEAFAVQALACVRGAALPADIVNPAGGALAQGHPVGASGALLV VRLFHALRCGDGIALAAIAAAGGIGSAALFEAT" /EC_number="2.3.1.9" CDS complement(1911201..1913417) /locus_tag="Silicibacter_1759" /function="COG: Catalase (peroxidase I)" /gene="katG" /transl_table=11 /note="identified by match to putative ortholog SPOA0061 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="catalase/peroxidase HPI" /translation="MDGQDIGAGGGCPFSGANTNKGRRSNRDWWPNQLNLSILHQHQA RQNPLGETFNYAEAFKSLDLDAVKKDLIALMTDSQDWWPADYGHYGGLMIRMAWHSAG TYRTADGRGGASTGTQRFAPLNSWPDNGNLDKARMLLWPIKKKYGNALSWADLMILAG NCAIESMGLKPFGFGGGRADVWEPEEDIYWGAEDEWLATSDHAQARYSGDRVLEDPLA AVQMGLIYVNPEGPDGNPDPIASGRDIRETFARMAMNDEETVALTAGGHTFGKAHGNG PVDAVGPEPEAAPIEAMGQGWLSSHKSGKGVDTITSGIEGAWTPNPIQWDMGYFDVLF GYDWELTKSPAGAWIWHAKDLKEDDHAPEVDGSGKKVPIMMTTADMAMKMDPIYGPIS KRFHENPEEFAEAFKRAWFKLTHRDMGPKACYLGADVPDEDLIWQDPLPAVDHALIEE ADIASLKADILASGLSVQDLVYVAWSSASTFRGSDKRGGANGARIRLAPQKDWEVNEP AKLEKVLNALEGIQSSFNAAASGGKKVSLADLIVLAGSAAVEKAAKDAGFDVTVPFTP GRTDATDEQTDVESFDVMEPQIDGFRNYAPKKFSVSTEEMLVDKAQLLTLSAPEMTVL VGGLRAIGANYGDSAHGVLTSRKGQLTNDFFVNVLDLGTKWTATDDSGEIFEGADRAT GEVKWTGTRADLIFGSNSQLRALSEVYAQDDNAGKMVADFVKAWVKVMELDRFDLK" /EC_number="1.11.1.6" CDS 1913596..1914519 /locus_tag="Silicibacter_1760" /function="COG: Transcriptional regulator" /translation="MINITLKQLRYFEALTRHGHFGRAADACAISQPALSIQIKELEE TLGIVLFERSARHVRLTGFGQDFAERAREILRSVDELGDLARVAQDRMVGRLRIGVIP TVAPYLLPTLIQRLNARHDGLDVHIRETLTQRLITELLEGRLDTAIVALPVSESGLVE TALFEEKFVLVRQASDAGAPVPSPEGMREMKLLLLEEGHCFRDQALSFCSLRPALPRD GLDGSSLSTLVQMVGAGIGVTIIPEMAVAVETRSAPVSLARFPGDEPGRTIGMVWRKT SPLAPQLQDIAEVVREAAEALARRNRDVLPL" /product="transcriptional regulator, LysR family" /transl_table=11 /note="identified by match to putative ortholog SPO2105 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1914529..1915317) /locus_tag="Silicibacter_1761" /function="COG: Enoyl-CoA hydratase/carnithine racemase" /gene="caiD-2" /translation="MSQDSPIKTRREGAILEVTLDRPKANAIDLATSRQMGEAFQAFR DDDALRVAIITGGGDKFFCPGWDLKAAAGGDAVDGDYGVGGFGGLQELRDLNKPVIAA VNGIACGGGLELALSADMILAADHASFALPEIRSGTVADAASIKLPKRIPYHVAMELL LTGRWFDAEEAHRWGLVNEIVAADQLMDRAWELARLLASGPPLVYAAIKEIVRDAEDS KFQDAMNRITGRQLRTVDVLYGSEDNLEGARAFAEKRDPVWKGR" /product="carnitinyl-CoA dehydratase" /transl_table=11 /note="identified by match to putative ortholog SPOA0285 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1915314..1917353) /locus_tag="Silicibacter_1762" /function="COG: Acyl-CoA synthetase (NDP forming)" /translation="MQSLNRLFRPKTIAVVGGGAWCLAVIEQCRRMGFEGEIWPVHPK AEEVAGLTAYADVAALPSAPDASFVGINRLATIDVVRALAERGAGGAVCFASGFLEAE AEDSEGANLQQNLLEAAGSMPILGPNCYGFINYLDGALLWPDQHGGQRVEKGVAIITQ SSNIALNLTMQKRALPLAYVVTCGNQAQTGIAAIGEALLEDDRVTALGLHIEGFGDLR AFESLAVKARQLGKQIIALKVGRSAQARAATVSHTASLAGGDAGASALLGRLGIPRLY DLPSFLETLKLMHMVGRLPSTRIATISCSGGEASLAADTAHGRGVSFPPLNERQRTDL RAALGPMVALANPLDYHTYIWRDVDAMTRAFAAMVDPQLGLTMIVVDFPRDDRCDASD WDCVIEAAIAVRQQTGQPIALVATLPELLPETVMEQLIAADVVPFMGLSEAITATEAA GHPLPELTHPLLLPTKSHSNPDLVPEGEAKAWLARFGLRVPRSKPARSVVAARAVAAD IGYPVALKGEGIAHKTEEGAVRLNLRSGQEVSDAAVAMPTDRFLVEEMITGAVAELLV GVTKDPAHGFVLTLAAGGTLTEVMQDSTSVLLPASDSALSTALDSLRIAPLLKGYRGA PPADRAAIMRAIRAVEAYVIAEAEGLEEIEINPLICTPSDAVAADALMRRKDKIK" /product="acyl-CoA synthetase, putative" /transl_table=11 /note="identified by match to putative ortholog SPOA0287 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1917360..1917674) /locus_tag="Silicibacter_1763" /translation="MSTTAEPTTKPHITITYCIGCNWLLRAAWMSQELLSTFQEQLAG VTLVPGEIGGTFEISVEDQLIWERKRDGGFPDVKELKTRVRDLINPEQSLGHLDRNSS SE" /product="hypothetical protein" /transl_table=11 /note=", Selenoprotein W-related, Selenoprotein W-related family, CXXU_selWTH: selT/selW/selH selenoprotein domain" /note="Hypothetical protein" CDS complement(1917677..1918876) /locus_tag="Silicibacter_1764" /function="COG: Acyl-CoA dehydrogenases" /gene="acdA-3" /transl_table=11 /note="identified by match to putative ortholog SPOA0288 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="acyl-CoA dehydrogenase" /translation="MEQADTPTRRELVHFGMTEEQAMIVETTRAFVENELYPHELEVE RSGHLDMDLIKELQSKAIEAGLYAANMPEEVGGAGLDTLSWLMYEKELGRANYALHWT AVARPSNILLAGTDEQKEKYLFPCIRGEKWDCLAMTEPGAGSDLRGMTASARKEGDDW VLNGTKHFISHADIADFAIVFMATGEEDTPRGKKKKITAFFVDKGTPGFAVRDGYRNV SHRGYTNQVLEFDDCRLPSSAILGEVDQGFEVANTWLGATRLQVAATCLGRADRALQH AVEYAAQRKQFGQPISKFQGVSFKLADMAMELKAANLLTWEAGWKFDQGSVTEADMSM AKLKATEMLAMVADEAIQIHGGMGLMDELPLERIWRDARVERIWEGTSEIQRHIISRE MLRPHGG" /EC_number="1.3.99.3" CDS 1918925..1919872 /locus_tag="Silicibacter_1765" /function="COG: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain" /translation="MQKWTNDLATASQVDILLFDDFSGHCLANTVEPMRAANTLAGRE LYRWRFLSLNSSRVVSSSGMEVTAHAQLADCRGDMLAVMPSYNFLRHDTPETRRALRA AAMRYRELAGLDTGPWLLAAAGLLDGRRATIHWDELERLAEAYPDIDVQRSRYVLDGN RITCTGALAAFDLMLERIGIAHGQALRLEVAALFMSTEGSGPTPESMLARTKVVARAV GVMQAHVEEPLSIPEIARQIGRSRKDLEARMKSDLGATPAKVYRRLRLIQARKLILET DIGISEVATRTGYENPSALTRAFRVEFGTTPRALRAPTS" /product="transcriptional regulator, AraC family" /transl_table=11 /note="identified by match to putative ortholog SPOA0289 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1920389..1922194 /locus_tag="Silicibacter_1767" /function="COG: Adenine deaminase" /gene="ade" /transl_table=11 /note="identified by match to putative ortholog SPO3746 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="adenine deaminase" /translation="MTHKTFPSWPDVAPQLIETAAGRSPADTVIRNGKWVNVHTREVL EGHDIAIKAGRIAYVGPDASYCTGPETEVIDAEGRYMMPGLCDGHMHIESGMLTPAEF ARAVIPHGTTTMFTDPHEIANVLGLEGVRLMHDEALLQPVNIYTQMPSCAPSAPGLET TGYEISAEDVAEAMTWPGIIGLGEMMNFPGVAHGDPKMLAEIAATQRSGKTVGGHYAS PDLGPDFAAYVAGGPADDHEGTCEADAITRMRQGMRAMVRLGSAWYDVEAQITAITEK GLDPRNFILCTDDCHSGTLVNEGHMNRAVRHAIDCGCDPLIAIQMATINTATHFGLER EIGSITPGRRADIILTSDLKTLPIEVVIARGQIVAESGSIKVECPHLDWPESARGTVH LGHTLAATDFELAAPEGANAVTANVIGVVENQAPTKALKAELPVRDGLVEGEGDVCQI ALVERHRATGGVTNAFVSGFGYEGKMAMASTVAHDSHHMIVVGTDRTQMALAANRLAE VGGGITIFRDGAELALVELPIAGLMSDSPASEVAANAQKLVEAMQACGCTLNNAYMQH SLLALVVIPELRISDLGLVDVRSFKKIPVIEPFNE" /EC_number="3.5.4.2" CDS complement(1919918..1920397) /locus_tag="Silicibacter_1766" /function="COG: Arsenate reductase and related proteins, glutaredoxin family" /gene="arsC" /transl_table=11 /note=", [EC:1.20.4.1], Arsenate reductase and related, ArsC family, arsC: arsenate reductase" /note="Specificity unclear" /product="arsenate reductase" /translation="MCHGLLLLIAQMGARPVIRVHNSLMTSCRSTPLDIVIYHNPDCS KSRDVLRMIRDAGYAPTIVEYLSTGWTRAQLLGLFAAAGLTPHTALRRTRSPAEALGL LDDDVSADLILEKMVAHPELVNRPIVACRNGVKLCRPAAAVLELLDGKSQEASVLMA" /EC_number="1.20.4.1" CDS 1922187..1923653 /locus_tag="Silicibacter_1768" /function="COG: Nucleoside phosphorylase" /gene="amn" /transl_table=11 /note="identified by match to putative ortholog SPO3745 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="AMP nucleosidase" /translation="MNDVKTPDLPAAESFTDAKAAVARLIELYDSATNFLCDEFIAAM SAGAAPSSRMRAYYPEVRFTTTTYAQVDSRLSFGHVADPGIYSTTVTRPDLFRHYLEQ QIGLLIKNHDQPVTVGVSQTPMPVHFAVASRPGLTVPQEGAARFTLRDVFDVPDLATT NDDIVNGTYVPENGVGPLSLFTAQRVDYSLARLSHYTATDPEHFQNHVLFTNYQFYVT EFEAYAREQLADPDSGYTSFVSTGNVEITKADGELPASLKMPQMPTYHLKRPDGNGIT LVNIGVGPSNAKTATDHIAVLRPHAWLMVGHCAGLRNSQALGDFVLAHAYLREDHVLD DDLPVWVPIPALAEIQVALEEAVAEETGLEGYDLKRIMRTGTVASHDNRNWELRDQSG PVQRLSQSRAIALDMESATIAANGYRFRVPYGTLLCISDKPLHGELKLPGMASDFYRT QVSRHLLIGIKAMERLRTMPLERLHSRKLRSFDETAFL" /EC_number="3.2.2.4" CDS 1923797..1924090 /locus_tag="Silicibacter_1769" /function="COG: Bacterial nucleoid DNA-binding protein" /gene="hup" /translation="MSKPMTKTQLVAALAEEMDSDKKTAGAALDAVCNLITREVSGGG AVTLPGVGKIYCRERPEREVRNPATGEKFMKEADKVVKMTIAKALKDSVNGEG" /product="DNA-binding protein HU" /transl_table=11 /note="identified by match to putative ortholog SPO3744 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1924231..1925148 /locus_tag="Silicibacter_1770" /function="COG: Permeases of the drug/metabolite transporter (DMT) superfamily" /translation="MDLRAILMGLAFALMWSSAFTSARIIVADASPLFSLAMRFLLSG LIGVAIARAMGQTWRLTPAQWKATILFGICQNALYLGLNFVAMQWVEASMAAIIASTM PLLVALASLVLFREPIRPLGMLGLVAGVAGVALIMGTRISAGVDLLGIALCGLGVLAL TTATLALRGATSGGNFMMVVGLQMLVGSAALFPAAFAFETIRVDPSWPLAIAFVYTTF VPGLAATLIWVMLLNRIGAVRAATFHFLNPVFGVAVASSLLGERLGLLDMAGVAVVTF GILAVQLARQPATAAPARTSTAEPQMGQR" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3743 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1925139..1925252) /locus_tag="Silicibacter_1771" /translation="MDASIAGVGGRVFKPQSIPVGSLVLEMRANVNTVVQR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1925270..1925719 /locus_tag="Silicibacter_1772" /function="COG: Conserved domain frequently associated with peptide methionine sulfoxide reductase" /gene="msrB" /transl_table=11 /note="identified by match to putative ortholog SPO3741 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="methionine-R-sulfoxide reductase" /translation="MTKYFKNPDAIAALSEEEFYVTQNSGTERPGTGKLLSNKEPGIY VDIVSGEPLFASSDKYESGCGWPSFTKPIEPAHVQELEDRTLGMIRTEVRSTHGDSHL GHVFPDGPADRGGLRYCINSASLRFIHLDDMEAEGYGAYINQVEDHR" /EC_number="1.8.4.-" CDS 1925716..1926231 /locus_tag="Silicibacter_1773" /function="COG: Peptide methionine sulfoxide reductase" /gene="msrA-2" /transl_table=11 /note="identified by match to putative ortholog SPO3740 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="methionine-S-sulfoxide reductase" /translation="MTTTERAVLAGGCFWGMQELIRHRKGVLSTRVGYTGGDVPNATY KNHGTHAEGIEITFDPEQTSYREMLEFFFQIHDPTTVNRQGNDIGMSYRSAIYYVDAR QKQIAEDTIADVEASGIWPGKVVTEVEPVGDFWEAEAEHQDYLQRLPNGYTCHFPRPD WVLPKRDQAAE" /EC_number="1.8.4.6" CDS complement(1926309..1928315) /locus_tag="Silicibacter_1774" /function="COG: N-methylhydantoinase A/acetone carboxylase, beta subunit" /translation="MAILLGIDTGGTYTDAVLIRDESEVIASAKSLTTREDLAIGVGG AVRAVLAQSGVAPADISMAALSTTLATNALVEGQGGRVALIYIGFSAQDLERHGLDTA LKGDPVLLLAGGHTHAGSEAAVLDKEALIAFLETESTGVSGFAVAGVFATRNPAHELE VARLIQEHTGAPVTCSHQLSAKLNGPKRALTAVLNARLIGMIDRLIGRAADTLTALGV EAPMMVVRGDGALMSTDQARARPIETILSGPAASIVGARWMTGAENALVSDIGGTTTD VALIERGLPKIDPDGAEVGGYRTMVEAVAMRTTGLGGDSEVHLQREGLRGGVALGPRR VLPISLIATQAPETVHAALDTQLHAQVIGEYDGRFVRGVTGQQAHGLSAREEALLSRI GQDVRPLGEVLRSRVDQSALSRLIDRGLVQMAGVTPSDASHALGRVSTWDNEAAHKAL TIFAKRRVGSGDMVAKDADTLAQMIVDQLTEQTALTLLESVFSEERALFGGSPSDLAR HVLLQRGLQGHTGLVALDARVNVDVIGLGASAPSYYPAVGERLRCNMILPEHAGVANA IGAVVGRIVQRRSGTVTAPSEGRFRVHLADGPVDFTESEAALTALEYALRAETVAAAE EAGAGDIHVHVTKDLRTAEVEARQVFVEATLTVEASGRPRVAHA" /product="hydantoinase/oxoprolinase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3739 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1928389..1929432) /locus_tag="Silicibacter_1775" /function="COG: Uncharacterized Fe-S protein" /translation="METAAELKTRLIAQAKAEGFVSVRLCRPWDVPEVPERLRAFLEA GYHGQMKWMAERINWRENPAALWPEARSVIMLAESYTPDEDPMAVVGLPDRAAISVYA RGKDYHDLVKKRLKRLARWLIEEAPDEAQVKVFVDTAPVPEKALGQASGLGWQGKHTN LVSRDWGNWAFLGSIFTTLDLPVDAPEPDRCGSCRACLTACPTDAFPAPYQLDARRCI SYLTIEHKGPIEEELRTKLGNRIYGCDDCLAACPWNKFAVEASDMRYAAREGTIAPPL AELSQLDDAAFRARFSGSPIKRIGRDRFVRNVLYAIGNSGDAGLHVFAQALCDDPDPT VAEAARWAAARLP" /product="iron-sulfur cluster-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3763 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1929541..1930887) /locus_tag="Silicibacter_1776" /function="COG: Beta-lactamase class C and other penicillin binding proteins" /translation="MSSSTSNFFAATLAAAVALVVSSQAGAQSAPLSAQESDPNVMGW MQGFPPPADKIITQPDSVYFSFPRLRWSVCHLREFLPTEEISRGLSDPVPLTYPSASE FAELRAEIDAVTFMPQNSDAEMTWEQSLYANYTDGMLILHKGEVVYERYFGCLEEGGK HAIMSMTKSFTGLVAEIMVVEGLLDDTALVRDIIPEIGDSAFATATVRQVMDMTTGVQ YSEDYSDPNADIWLYSKAASPLPKPEGYVGPNGYWEYLQQVAPEGNHGDAFHYKTINS DMLGWIISRVSGQSVTDIVSDRLWRRMGVEQDAYQTVDAKGVPFAGGGITAGLRDLGR LGQLMLNEGELNGQRLFPTEVVAKISAGGDRSKFGDGFPTFGAGSYTSQWWVLHNAHG AYAARGVHGQTIYVDPTAEMVLVRLSSFPKAQNGFIDPTSLPAYQAVAEHLMATRP" /product="beta-lactamase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3636 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1930868..1932292) /locus_tag="Silicibacter_1777" /translation="MRVLSRYCLVASASSLAIAASAQERDPMLLYERDALTVRGHFQA GLNAVAEDNLFWDLAATTAPGSGFDPDTRWLESYIKPGISFEYRLDTGATLYGKLSGV ASYTWGKDAFDYGDTGATTLEEAYIAIRGRLGTDATYDLSLGARELTLGTGMLIANGA TSGFERGALKFGPRKAWEGAAIGRFTLGQVSGTAFYLDPNELPSTDGNNNLAGVDLRY DAPAGGYLGVTYVDVLNSESSYPKAAPGGVGAPSILPGGREGTRTLGLYGRTNPFDNG LENWTFTGEVAYQWNDRIDLEAWAGRVTAGYTFEGLAWSPNLTIGYQSFSGDDPNTTK LERFDPLYYQGSPSAWATGSKSASTFINSNVNALTLALRLQPSRQDTWTLRYAHIRAN ELNSPVQFGQATRVDLNGNVVSGVTDSHLADDLFLEYSRIINRNTFLTAGISVSFPGA GIDNVIGATADPWTGGFINVVVNF" /product="Outer membrane protein IIIA precursor (OMPIIIA)." /transl_table=11 /note="Conserved hypothetical protein" tRNA complement(1932683..1932755) /locus_tag="Silicibacter_22" /gene="Silicibacter_22" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS 1933002..1933829 /locus_tag="Silicibacter_1778" /function="COG: Diaminopimelate epimerase" /gene="dapF" /transl_table=11 /note=", [EC:5.1.1.7] , Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)., Diaminopimelate epimerase, Diaminopimelate epimerase, DapF: diaminopimelate epimerase" /note="High confidence in function and specificity" /product="diaminopimelate epimerase" /translation="MLPFMKMHGLGNDFVVIDARESDIEITPAMAKGIAHRQMGLGFD QLAVIATADASTEADAHLVFYNADGSTSGACGNATRCIARYLMDQSNKPSLRLTTDRG VLIATDAGEGLTSVNMGAPQLSWDEIPLAEELETLELPIEGAPSATGMGNPHCTFFVE DAEVIPLAEFGPRYEHHPLYPERTNVQIAHVVGPNHLRMRVWERGVGITLASGSSSCA TAVAAARKGLTGRKVQIDLDGGTLWIDWRDDGVWMTGPTMHVANGSFTRQFLESLSE" /EC_number="5.1.1.7" CDS 1933727..1935091 /locus_tag="Silicibacter_1779" /function="COG: 2-methylthioadenine synthetase" /translation="MDRLARRWGLDDRTNNACRQWQLYTAIPRKLVRMSNAPKFTTLG CRLNAYETEAMKELSRQAGLEGAVVVNTCAVTAEAVRKARQEIRKLRRDHPDAPIIVT GCAAQTEPETFAAMSEVTQVIGNTEKMQPETWQRMAKGLDFIGATEKVLVDDIMSVTE TASHLIDGFGTRSRAYVQVQNGCDHRCTFCIIPYGRGNSRSVPAGVVVDQIKRLVDKG YNEVVLTGVDLTSWGADLPASPKLGDLVMRILKLVPDLPRLRISSIDSIEVDENLMQA IATEPRLMPHLHLSLQHGDDLILKRMKRRHLRDDAIRFTEEARKLRPQMTFGADIIAG FPTETESHFENSLKLVTECDLTWLHVFPYSKREGTPAAKIPSQVNGNVIKERAARLRA IGEAQIARHLSEQIGRQHSILMENPHMGRTEQFTEVRFATPQTEGALVQAQITGSDGL QLTA" /product="MiaB-like tRNA modifying enzyme" /transl_table=11 /note="identified by match to putative ortholog SPO0277 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1935109..1935630 /locus_tag="Silicibacter_1780" /function="COG: Guanylate kinase" /translation="MALILFLHGPSSSGKSTLAKAIREASSRPLLHLSIDHLRDSGAW EPQAYPDWAGARAGFFSGFHRAVKAFADAGNDLILEHILDTPGWHADLQQLFCGHKVI FIGLTPSLSTLETREAARGDRPAGSAARDFEHVHRDLSYDLTLDGSAPLQESVRSILS MTSAPLARSRFFN" /product="Putative O-phosphotransferase Rv2636/MT2714" /transl_table=11 /EC_number="2.7.1.-" /note=", Putative O-phosphotransferase Rv2636/MT2714 (EC 2.7.1.-)., Chloramphenicol phosphotransferase-like protein" /note="High confidence in function and specificity" CDS complement(1935772..1936563) /locus_tag="Silicibacter_1781" /function="COG: Cytochrome c1" /gene="petC" /transl_table=11 /note="identified by match to putative ortholog SPO0273 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" /product="ubiquinol--cytochrome c reductase, cytochrome c1" /translation="MFKKIVTGAAFALALVPAASFAAGAGGHVEDYAFSFEGPFGTYD QNQLQRGLQIYTEVCAACHGLKQVPIRTLSDSDGPGMPEDQVRAYAADNFEVFDPELD DFRPAKPVDHFPENTALGAPDLSLMAKARAGFHGPYGLGINQLFKGMGGAEYIASLMT GYTGETKVEAGTTFYKNTAFPGGWISMAPPLADEQVEFIDGHENDLENLSKDVSAFLM WTAEPKMMARKQAGFVGVLFLTVLSVLLYLTNKRLWAPHKGKKTS" /EC_number="1.10.2.2" CDS complement(1936582..1937910) /locus_tag="Silicibacter_1782" /function="COG: Cytochrome b subunit of the bc complex" /gene="petB" /transl_table=11 /note="identified by match to putative ortholog SPO0272 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ubiquinol--cytochrome c reductase, cytochrome B" /translation="MSGIPHDHYEPKTGAEKWLHSRLPIVGLVYDTIMIPTPKNLNWW WIWGIVLAFCLALQIVTGIMLVMHYTPHADLAFASVEHIMRNVNGGYMLRYLHMNGAS LFFVAVYIHIFRGLFYGSYKAPREITWIVGMLIYLMMMGTAFMGYVLPWGQMSFWGAT VITGLFGAIPFIGEPIQTWLLGGPSVGNATLNRFFSLHYLLPFVIAALVIVHIWAFHT TGNNNPTGVDVRRGSKEEAKKDTLPFWPYFVIKDFLGLAVVLVIFWAIVGFMPNYLGH PDNYIEANPLVTPAHIVPEWYFLPFYAILRAFTSEVWVVQIASFVTGGIIDAKFFGVL AMFGAIAVMALAPWLDTSRVRSGKYRPQFKWWFLLLVIDFFALMWLGAMPAEEPYATF SLIASAYWFAYFLVILPLLGVIEKPEPIPATIEDDFNAHYGKKSEATPAE" /EC_number="1.10.2.2" CDS complement(1937926..1938486) /locus_tag="Silicibacter_1783" /function="COG: Rieske Fe-S protein" /gene="petA" /transl_table=11 /note="identified by match to putative ortholog SPO0271 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ubiquinol-cytochrome c reductase, iron-sulfur subunit" /translation="MSHAEDHEGTRRDFLYYATAGAGAVTAGAAVWPLVNQMNPSADV QALSSILVDISGVDVGTQISVMFLGKPVFIRRRTQEEIDEARAVEMAELIDASSENPN KPGTDASDENRTLDENGEWLVMMGVCTHLGCVPLGDGAGEFNGWFCPCHGSHYDTAGR IRKGPAPQNLHIPVAEFTDENTIKLG" /EC_number="1.10.2.2" CDS complement(1938711..1939313) /locus_tag="Silicibacter_1784" /function="COG: Glutathione S-transferase" /translation="MKLFYSPASPFVRKVVLVLHETEQLDDVELQLVATTVTEPDSAL AASNPLAKIPALAREGGPTLYDSRVICEFLDSRAGSTLYRGGWDIKVLEATADGIMDA AVSMSYEKRLRPAEKQWDAWLEGQTRKVLGGCSAVETRWMPLLSGPINIGQLAVAAAL DYVDFRHPDLNWRAAAPELAAWFKTFETRPAMVATNPRQS" /product="glutathione S-transferase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0270 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1939431..1940126) /locus_tag="Silicibacter_1785" /function="COG: ABC-type spermidine/putrescine transport systems, ATPase components" /gene="thiQ" /transl_table=11 /note=", Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase)., ABC transporter related, ABC transporter, thiQ: thiamine ABC transporter, ATP-binding protein" /note="High confidence in function and specificity" /product="Sulfate/thiosulfate import ATP-binding protein cysA" /translation="MLRLEDLDIRKGSFCLSGTASIGAADSVAVIGPSGAGKSTLLEA IAGFQPLHAGQVLWRGEDLTAHRPGQRPVAMLFQDGNLFPHLTVRQNAGLGIDPNRKL RPKERQTVEEAIARVGLGGLEERKPAELSGGQQSRAALARVLVQRRDILLLDEPFAAL GPALKAEMLDLVKEITSENGVTLLMVSHDPDDARRIADQVILIAEGQLYPPAPTHALL DNPPPALRGYLGA" /EC_number="3.6.3.25" CDS complement(1940113..1941684) /locus_tag="Silicibacter_1786" /function="COG: ABC-type Fe3+ transport system, permease component" /gene="thiP" /translation="MARSAQPISLPVVATWPGTCAALGVLLLVLGTLVAVAWHADGGA RFAAADWAALRFTLVQASLSALLSVGLAVPVARALARRRFWGRRALITLLGAPFILPV IVAILGLLSVFGRSGWVSDILSLIGVPPLQIYGLHGVVIAHVFFNLPLATRLILQGWQ EIPAERFRLAAQLNAGPRAIWFLIELPMLRQVLPGAAAVIFAICLSSFAVALTLGGGP RATTLELAIYQAFHFDFDLGRAAMLATVQLGLTIVAALLALRASTTEGLGAGLDRAVM RWDGKGAFTRCLDGVWIFAAALFLLLPLLSVVMAGLPGLWTLPRSVWSAALVSLQVAT LSTVLLLIVALPLSASIALGRKRLGEVAGILGLAASPLVIGTGLFVMVYPFVDPRLLA LPVTALVNMVMALPFALRILVPRLRQVLWQNGRLALALDMRAGTVWRIVLLPRCRAQI GFATGLTAALSLGDLGVIALFADPEVATLPLQVYRLMGAYRMEAAQAAALLLFVLSIG AFWALDRGGRFHAEA" /product="Thiamine transport system permease protein thiP." /transl_table=11 /note=", thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein" /note="Conserved hypothetical protein" CDS complement(1941660..1942640) /locus_tag="Silicibacter_1787" /function="COG: Spermidine/putrescine-binding periplasmic protein" /gene="tbpA" /translation="MKSLIFASATCLATAVAAADTPELVVYTYDSFVSEWGPGPAVEE AFEAVCGCDLKFVGAGDGAALLARIKLEGARSDADVVLGLDTNLTAAAKETGLFAPVS VEADYALPITWSDTHFAPYDWGYFAFVHNADVPAPSNFEALADSDLKIVIQDPRSSTP GLGLLMWVKAAYGEDAPALWEGLSDNIVTVTKGWSEAYGLFLEGEADMVLSYTTSPAY HLIAEEDDSKSAALFDEGHYMQVEVAGKLAASDESALADQFLEFMVSDAFQSIIPTTN WMYPAVTPDSGLPQGFETLISPEKSLLLPEDEAAALRAEALEEWRAALSR" /product="Thiamine-binding periplasmic protein precursor." /transl_table=11 /note=", Proteobacterial thiamine ABC transporter, periplasmic binding protein, sfuA: ABC transporter periplasmic binding protein, thiB subfamily" /note="Conserved hypothetical protein" CDS 1943117..1944229 /locus_tag="Silicibacter_1788" /function="COG: Chorismate synthase" /gene="aroC" /transl_table=11 /note="identified by match to putative ortholog SPO0267 from Silicibacter pomeroyi DSS-3, Chorismate synthase, shikimate pathway, belas" /note="Hypothetical protein" /product="chorismate synthase" /translation="MSMNSFGHLFRVTTWGESHGPALGATVDGCPPNVAVSEEMLQHW LDKRRPGQNKNTTQRNEPDAVRILSGVFEGKSTGTPIQLMIENTDQRSRDYGEIAQTF RPGHADITYFQKYGNRDYRGGGRSSARETAARVAAGGVAREALKSLAPGIEIKGYMTR MGEMEIDRARFDWSAIDQNDFWIPDAAAVQDWEDYLQALRKQHDSVGAVVEVVARGVP AGIGAPIYGKLDTDLAAAMMSINAVKAVEIGEGMNAALLKGSENADEIFMGNDGAPVY SSNHAGGILGGISTGQDVVIRFAVKPTSSILTPRQSIRKDGTAAEVITKGRHDPCVGI RAVPVAEAMMAFVILDHILLHRGQIGENQGVIGAPD" /EC_number="4.2.3.5" tRNA complement(1944480..1944563) /locus_tag="Silicibacter_37" /gene="Silicibacter_37" /description="RNA" /note="Created by Search for RNAs Autoannotator" tRNA complement(1944723..1944806) /locus_tag="Silicibacter_8" /gene="Silicibacter_8" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS 1945008..1945997 /locus_tag="Silicibacter_1789" /function="COG: Predicted nucleoside-diphosphate-sugar epimerases" /translation="MSKLVTIYGGSGFVGRYIARRMAKEGWRVRVAVRRPNEAMHVKP YGVPGQVEPVFCNIRDDASVAAVMAGADAVVNCVGVLNEVGKNTFSAVQSEGAGRIAR IAADTGVERLVHVSAIGADADGDSAYARTKAEGEAAVLEAFPSAMILRPSIIFGPEDQ FFNRFASMTRFGPVLPIAGGTTRFQPVYVDDVAKAAVAGLTGQAAAGTYELGGPEVKS FTELMSQMLDVIHRRRLVVSLPNFVARLMAFGFDMAQAVTFGLFTNGLLTRDQLKNLQ NDNVVSEGAKGLADLGIEPVTMGSVLPDYLWKFRPSGQYDELMKSAGNLRGDI" /product="NADH ubiquinone oxidoreductase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3772 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1946056..1946859) /locus_tag="Silicibacter_1790" /function="COG: Uncharacterized bacitracin resistance protein" /translation="MPLLQLILVALIQGVTEFLPVSSSGHLILLPRLTGLEDQGQAID VAVHVGTLAAVVLFFWRDVRAGLIGLPRALIGRLDTKGARLALGLIVATIPTVIFGTF LYFTGLSESLRSVAVIGWTMLVFGVVLYIADQRGPIDKSASDWGVRDAVIMGLWQMLA LIPGTSRSGITITGARSLGYNREDGARIAMLMSIPTIIASGVLLGTEVALDADVDLMR DMGIAALLAMASALAALALMMRLLRSVSFTPYVIYRVALGMVLLFIAYG" /product="undecaprenol kinase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3771 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1947092..1948534 /locus_tag="Silicibacter_1791" /function="COG: NADPH-dependent glutamate synthase beta chain and related oxidoreductases" /gene="gltD" /transl_table=11 /note="identified by match to putative ortholog SPO3770 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="glutamate synthase, small subunit" /translation="MAKQPMLKFVKIDRDMPEKRDAETRREDFDEIYAEFAAVKAEEQ ASRCSQCGVPYCQSHCPLHNNIPDWLRLTATGRLEEAYATSQATNTFPEICGRICPQD RLCEGNCVIEQSGHGTVTIGAVEKYITDTAWDKGWVKPNAPIEERAESVGIIGAGPGG LAAADMLRKAGVQVTVYDRYDRAGGLLTYGIPGFKLEKEVVMRRNQLLADGGVTFVMN CNIGEDISFDEIRAKHDAVIIATGVYKSRDLNMPGSGAKGIVKAIDFLTASNRVANFG DTVPEYEDGTFNATGKKVVVIGGGDTAMDCVRTSVRQGAESVKCLYRRDRANMPGSQR ETQNAEEEGVVFEWLSAPKGFTDADGKVSGVMVQKMRLGQPDASGRQAPEVIEGADYV EEADLVIKALGFEPEDLPTLWGQPNLPVTRWGTIKAEFKTGATNLDGVYAVGDIVRGA SLVVWAIKDGRDCAEAIIERFNNKAAVAAE" /EC_number="1.4.1.13" CDS 1948609..1953141 /locus_tag="Silicibacter_1792" /function="COG: Glutamate synthase domain 2" /gene="gltB" /transl_table=11 /note="identified by match to putative ortholog SPO3768 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="glutamate synthase, large subunit" /translation="MTKYDENWVRAEEAKRKWMAENGLYAEEEEHSSCGVGLVVSVDG SKSRKVVDAGIDALKAIWHRGAVDADGKTGDGAGIHVQIPVPFFWDQVKRTGHNPRED ELLAVGQVFLPRTDFGAQETCRTIVETEVLRMGYYIYGWRHVPVDVTCLGEKANATRP EIEQILISNSKGVDEETFERELYVIRRRIEKAAAAAQVGGLYIASLSCRSIIYKGMML AEQVAVFYPDLMDERFESAFAIYHQRYSTNTFPQWWLAQPFRMLAHNGEINTLKGNVN WMKSHEIRMASSTFGDHAEDIKPIVASGSSDSAALDSVFEVLVRAGRSAPMAKTMLVP ESWSKQAEELPQAWRDMYSYCNAVMEPWDGPAALAMTDGRWVCAGLDRNGLRPMRYVV TGDGLVIAGSEAGMVPIDEASVVEKGALGPGQMLAVDMAKGQLYHDVEIKDKLARALP FGEWVEKVTDLDEVLGGVQETPLFSGEELRRRQVAAGYTIEELEQILAPMAEDGKESL ASMGDDTPSAVLSKQYRPLSHFFRQNFSQVTNPPIDSLREFRVMSLKTRFGNLKNVLD EDSSQTEIVVLESPFVGNSQWDKLVENLGSKLAEIDCSFAPGRGALNAALARIRAEAE EAVRSGAGHIVLTDQHSGADKVAMPMILATSAVHSHLTRQGLRTFCSLNVRSAECIDP HYFAVLIGCGATVVNAYLAEDSLADRIERGLLDGSLTENVARYREAIDQGLLKIMAKM GISVISSYRGGLNFEAVGLSRAMVAEYFPGMTSRISGIGVHGIQVKAEEIHAKGWNTQ ENVLPIGGFYKARKSGETHAWEATSMHMMQMACNKASFELWKQYSAKMQSNPPIHLRD LLDIKPLGKPVPLEEVESITAIRKRFVTPGMSLGALSPEAHKTLNVAMNRIGAKSDSG EGGEDPAHFVPEPNGDNPSAKIKQVASGRFGVTAEYLNQCEELEIKVAQGAKPGEGGQ LPGMKVTDLIARLRHSTKGVTLISPPPHHDIYSIEDLAQLIYDLKQINPRCKVTVKLV ASSGVGTIAAGVAKAKADIILISGHNGGTGASPATSIKYCGLPWEMGLTEAHQVLAMN NLRDRVTLRTDGGLRTGRDIVMAAMMGAEEYGIGTAALIAMGCIMVRQCQSNTCPVGV CTQDEALRGKFTGNADKVVNLITFYAQEVREILASIGARSLDEVIGRADLLAQVSRGS AHLDDLDLNPLLITVDGSASIVYNRDKDRNAVPDTLDAEIVRDAARFLKDGEKMQLSY AVQNTHRTVGTRTSSHIVQNFGMRNTLQPDHLTVKLQGSAGQSLGAFAAPGLKLEVSG DANDYVGKGLSGGTIVVRPPMASPLNAAENTIVGNTVLYGATDGYLFAAGRAGERFAV RNSGAKVVIEGCGTNGCEYMTGGVAVILGSIGANFGAGMTGGMAYLYDPDGNAETLMN MESIVTCPVTVDHWEAQLKDLIERHVAETGSRKAAEILQHWDSEKTHFLQVCPKEMLN KLPHPISVETSAIPAE" /EC_number="1.4.1.13" CDS 1953286..1954029 /locus_tag="Silicibacter_1793" /function="COG: Membrane carboxypeptidase (penicillin-binding protein)" /gene="mtgA" /transl_table=11 /note="identified by match to putative ortholog SPO3766 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="monofunctional biosynthetic peptidoglycan transglycosylase" /translation="MAKAARKKKSAPKSPSGLARFSPRALYRRLRRSVLRVVFGGLAA FLALILLYSVVNPPITHTIWVEKRRLGDVDREWVPIEHISPHMARSVVAAEDARFCEH WGFDVHAIRSALESGANRGASTLTQQVVKNVFLWQGRSWFRKALETFITPVVEATWSK ERIVEVYLNVAEMGEGIFGADAAARHYFGVGPDQLSAQQAALIAALLPNPKERSAADP GNFMRKRARQIMDGAATIERDGRSACFEH" /EC_number="2.4.2.-" CDS 1954099..1954764 /locus_tag="Silicibacter_1794" /function="COG: Glutathione S-transferase" /translation="MARLYHVPLSPFCRKVRLSLAEKKIEVELVEERYWEQDADFLRR NPAAKVPVLRLDGILMAESAAICEYIEETRPDPSLMPKKPAERLEVRRLVSWFDDKFH HEVTSKLLYERVNKKMTGEGYPDSGNVKSGAKAIKYHIDYLSWLLDHRRWLAGDSMTL ADFAAAAHLSSLDYISDVDWNRSAVVKDWYAKIKSRPAFRSILADQVPGFRPPSHYAD LDF" /product="glutathione S-transferase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3764 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" tRNA 1954832..1954904 /locus_tag="Silicibacter_62" /gene="Silicibacter_62" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS complement(1955064..1956548) /locus_tag="Silicibacter_1795" /function="COG: Uncharacterized membrane-bound protein" /translation="MLWSLLKILVFVAIVALLAFGAGVLMETAGGVQITVAGTEYTLG ALQSVMALLALMLLTWLFFKLLSLLLATLRFLNGDETALSRYFDKGRERRGYQALSDS LMALAVGEGRTALTKAAKAERYLQDPALTDLVVAQAAEMAGDTHKAAEAYKRLLSDQS TRFVGVRGIMKQKLSEGDTETARQLAEKALALRPKHEEVQDTLLKLQAQAEDWAGARQ TLATKLKTGTLPREVFKRRDAVLALSSSKALLAEEATPEQQEQAIEANRLSPDLVPAA ALAARSYIAKGKPRNAVRILKKAWEAQPHPDLAHAFAEIEPNETAEARVKRFEPLLRL KPDHDETRLVRAELLIVAEDFPEARRALGDLVDRAPDARALTLMAAIEKGEGGPDAMV QGWLTKALTAPRGPQWVCESCNHIHAEWAPTCENCASFDTLTWKRPETPEYHSATGAA MLPLLAGRQDDNGTGALTIIDPEPSDVREDGDQTQRTDNPDDKR" /product="HemY domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3851 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1956559..1957878) /locus_tag="Silicibacter_1796" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MAVDKKTENAAKPDPEDVKETEVADQPQEPDAVASDLEANHGET AELDPSVVPEEADSETETETETETETETETETETETETETETETETETGEQESQTPPA PVIEERIIEKRGSFGSAVLGGVVAALIGFVAGKGGVLDNFLPPSWRDSSVDIAPLRTA QAELQSQVTDLRGSVAEIEIPDLGPLTTRLKDLEEAQSQFNQPSSDTSEELAQALQRL TDRVAALEARPITEGAPADAVEAFEAELQRVRESLSTQQAEVERMVSEAQEMERASAE AARVAAAQSVVSRLRSALDAGAPYADLLSELRSLGVEAPEAITSAADTGVATLTGLRD GFAPAARAALAAAREETKGSGGLMAYVYRHLGARSVQPRDGDDPDAILSRAGAAVDGG DIAAALEELAALPESAKAELEAWQIAARTRLEAEAATDALSQSLNAN" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3852 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1958590..1959837 /locus_tag="Silicibacter_1798" /function="COG: Metal-dependent proteases with possible chaperone activity" /translation="MAEDQQTAAPRKAGGSSTEIGPSCSPRRSRDCLPHLMVVAAQYK GCNGRAMTQTLTLLGLESSCDDTAAAVVRQTTGAKAEILSSIVFGQTELHSAYGGVVP EIAARAHAEKLDSCVRDALAEAGLTLGDLDAIAVTAGPGLIGGVMSGVMCAKGISAAT GLPLIGVNHLAGHALTPRLTDDITYPYLMLLVSGGHCQYLIARGPETFSRLGGTIDDA PGEAFDKTARLLGLPQPGGPSVQAEAEHGDPERFRFPRPLLDRPDCNLSFSGLKTALM RMRDQIIAEKGGLTRQDRADLCAGFQAAIVDTLVEKTRRALRLYLEDKPQHPTLAVAG GVAANTEIRNGLMALCFELETDFLAPPLALCTDNAAMIAYAGLERYKTGARDGMSLSA RPRWPLDKTSPALIGSGKKGAKA" /product="O-sialoglycoprotein endopeptidase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3854 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1957928..1958665) /locus_tag="Silicibacter_1797" /function="COG: Uroporphyrinogen-III synthase" /translation="MNRKGLSLLMTRPLSAAQRFVDLLPSEMCRELPIIYSPLMEIAP LQGLIDLGGIDAVIFTSGEGVRVASAAQPLRLRAYCVGERTASAACEAGWSAQFVGDT ADTLVEALLASRPSGKLLHLHGEYTRGAVAERLSEGGVSCSGQAIYRQALCPLSAEAE AALTAQIPLIVPLFSPRTAAHFDSLCPEKAHLSLIAMSDAVAEAMPRLQSRVRHVSKF PTAEAMAELVCDVAAALLRVETKPPED" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Uroporphyrinogen III synthase HEM4" /note="Hypothetical protein" CDS 1959834..1960796 /locus_tag="Silicibacter_1799" /function="COG: Glycerol-3-phosphate dehydrogenase" /gene="gpsA" /transl_table=11 /note="identified by match to putative ortholog SPO3855 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="glycerol-3-phosphate dehydrogenase (NAD(P)+)" /translation="MSVAVLGAGAFGTALAISLARKAPTTLWCRSKDHADEIRSTREN TRRLPGAPLPDALAVTSDIACLGAHDVILLAVPMQKMRGFLTAHHAALSGKTLVACCK GIELDSGLGPVAVLRDTVPDATAALLTGPSFAADIALGLPTALTLACDPDETGKALQA TLSTDNLRLYRTTDLTGAEIGGALKNVIAIACGAVIGARLGDSARAALMTRGYAEMQR LALARGARPETLAGLSGFGDLTLTCGSELSRNFRLGLSLGRGEAFDPSITVEGAATAR ATAKTAQEMGLEMPITQTVTNLLDQRLTISDAADQLLKRPLKEE" /EC_number="1.1.1.94" CDS 1960798..1961070 /locus_tag="Silicibacter_1800" /translation="MLIALIARDKPDHLQTRLDNRAAHLAYIEETGVVAQAGPLLDQN GEMVGSLVILDVEDMAAGEAWAANDPYNKAGLFEAVELITWKKVIG" /product="YCII-related domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3856 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1961070..1961492 /locus_tag="Silicibacter_1801" /translation="MAYWLFKSEPNTWGWDDQVAKGEAGEEWDGVRNYQARNFMREMK LGDRGFFYHSLKEKSVVGIVEVCAKSHPDSTTDDPRWDCVDIKAIRPFVKPVSLDQIK SNPMLENMVLVKNSRLSVQPVTDAEWQEICKMGDTPAD" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3857 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1961546..1961941 /locus_tag="Silicibacter_1802" /translation="MEILSVIAATIAAFVAGAAYYGALAEPWMAASGVERDENGKPKG GQNPSVFAFAFLCQLVVAGMMRHVFSLSGIETLGAGLLAGMGVGLFFITPWIALNNLY GMRPRQLTIIDGGYASLACSIMGAVLALI" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3858 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1962142..1962483) /locus_tag="Silicibacter_1803" /translation="MGKRDELIAQYAADLQNKCGVTPDMDLLTKVTIGCGPAIYNADA STVAASQPEELETVKNNFLIKKLGLSDGPELMEAINLVVETYGKSERNKYRAVVYYML TKHFGKESVYS" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3859 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1962708..1964093) /locus_tag="Silicibacter_1804" /function="COG: S-adenosylhomocysteine hydrolase" /gene="ahcY" /transl_table=11 /note="identified by match to putative ortholog SPO3861 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="adenosylhomocysteinase" /translation="MAGDYIVKDISLAGFGRKELDIAETEMPGLMALRKEYGEEKPLK GSRIVGSLHMTIQTAVLIETLVALGADVRWASCNIFSTQDHAAAVIAEAGIPVFAIKG QSLEEHWDYLDRSFQFPEGPNLILDDGGDATLYILLGARAEAGEDIISVPTSEEEEVI KAQIKKRMEQSPGWFTKMRDQIKGVSEETTTGVHRLYELVKQGQLPFPAINVNDSVTK SKFDNKYGCKESLVDGIRRATDTMMAGKVAVVCGYGDVGKGSAASLSGAGARVKVTEA DPICALQAAMDGYEVVLLEEALDADIFITTTGNKDILRIEHMREMKDMAIVGNIGHFD NEIQVANLKNHKWTNIKDQVDMVEMPSGNRIILLSEGRLLNLGNATGHPSFVMSASFT NQVLAQIELWTRGDQYDNKVYILPKHLDEKVAALHLERVGAKLTKLTPEQAAYIGVKP EGPFKPEHYRY" /EC_number="3.3.1.1" CDS 1964360..1964968 /locus_tag="Silicibacter_1805" /function="COG: Predicted hydrolases of HD superfamily" /translation="MDQIMPAKSPRAWQRMLSGRRLDLLDPTPVDIEIEDIAHGLAFV ARWNGQTRGDFAYSVAEHSLLVEELHGRMFPKAPIKWKLAALLHDAPEYVIGDMISPV KAAVGPGYGELDDRLTSAIHIRFGLPASLPKTVKAQIKRADKVSAWMEAVQIAGFSEA EATKFFGRPNPDLIEGLDIHLRPPVEVRRDFVSRHEALLKLL" /product="HD domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3863 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1964971..1966188) /locus_tag="Silicibacter_1806" /translation="MCATEHPAPTTPPSPEGGWSESISVLRNVTVVPPVESNLVQAAG LLREDGSYCAEGALWRRHRPITTEPPKPSEFAEKISGRWLWGGVLWAHFGHFLVESTA RLWALSELDAPVDGVLFIPKRPAVRDQVRGFQAEFVDLMQRDLPIRVAADPSLVEELV IPGQGFGLGRITEATPKYRNAIHARFARDIKPEGPEKIYISRSKLGLGKGGLLGEEQM EAFLAAEGYEIFHPQEHTLSEQLARYKAARKVIAADGSALHLYAMVGRPDQKVAMVLR RKSTAHTLLTDNVRYFCKCDPLVIGALRTEWVPKNNQRSSRLSFGELDHSVIGRALHE AGFISGGKNWPVLDDAARNQVLKDKGIKSDRFVESPAFRKAREEKERAERRARRAARH ARRQARAAAQNDG" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3864 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1966197..1966751) /locus_tag="Silicibacter_1807" /function="COG: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /gene="regA" /translation="MAEAVQSEIGPDPSLLLVDDDEPFLRRLAKAMEKRGFAVETADC VAAGQAIVSARPPAYAVVDLRLEDGNGLDVVEVLREKRPDSRIVVLTGYGAIATAVAA VKIGATDYLSKPADATDITNALLAGDDALPPPPENPMSADRVRWEHIQRVYELCDRNV SETARRLNMHRRTLQRILAKRSPR" /product="Nitrogen regulation protein NR(I)." /transl_table=11 /note="Response regulator, RegA/PrrA/ActR type, Response regulator receiver domain, belas" /note="Conserved hypothetical protein" CDS complement(1966832..1967455) /locus_tag="Silicibacter_1808" /function="COG: Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems" /gene="senC" /translation="MMRNIAILAFASVAALLGGVWYLTLRGGASDDAFAQCRASAVAG GSAAIGGPFELVNAKGETVTDKDVITEPSILYFGYTFCPDVCPLDTARNAEAVDVLAD RGYSTTPVFISIDPKRDTPEVVGDFAFNLHEKMIGLTGSPEQVKAASQAYKTYYKAQE GDEDYYLVDHTTMSYLVLPEHGFVDFFRRDVSPEQMADRVACFIDNS" /product="SCO2 protein, mitochondrial precursor." /transl_table=11 /note="Electron transport protein SCO1/SenC, SCO1/SenC, belas" /note="Conserved hypothetical protein" CDS 1967574..1968971 /locus_tag="Silicibacter_1809" /function="COG: Signal transduction histidine kinase" /gene="regB" /transl_table=11 /note="[EC:2.7.3.-], Sensor histidine kinase regB (EC 2.7.3.-) (PrrB protein)., Histidine kinase, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, homology to regB, belas" /note="High confidence in function and specificity" /product="two component sensor kinase" /translation="MSETTLGLMSGQKRSHWVRLRTLIVLRWVAIIGQATAIGVAQTQ YDLQLSLWPCYLAIGVSALANLVAWIVFPENKRLTEFQNFLMVLFDLLQLCFLLYMTG GLNNPFALLVLGPVTVSASVMRLRSTLIIGTSAVILVTLLVPWHVPLQTAAGEILKMP VLFVFGHWCALVIAILFMGAYSYRISAEIRSMSDALAATQLALSREQKLTDLGGVVAA AAHELGTPLATIKLTSSELIEELDQNPELQDDARLIREQADRCRDILRSMGRAGKDDL HLRQTPLSALVHEAAEPHFERGKEIRLSEHPAEGDALNQPSVLRKPEIIHGLRNLVQN AVDFAQSKVWIELHWSAETITVRISDDGNGFPGHLIGRLGDPFMRRRAPHAERGNRPE YEGMGLGLFIAKTLLERTGARLKFLNGRDVAMSPDLSPAQRGALVIVTWPRRKIDAVS GDTPVPTGENIPIQF" /EC_number="2.7.3.-" CDS 1969057..1970607 /locus_tag="Silicibacter_1810" /function="COG: FOG: PAS/PAC domain" /gene="divL" /transl_table=11 /note="homology to divL, belas" /note="High confidence in function and specificity" /product="sensor histidine kinase protein" /translation="MQELMSVEWFILVTLCIASAAVAVWFLNPKAEAKGMEHELLIAD GRTDAVFLFDDQTLIAWSSGARKFLDDNAEDFSWGKLRDKLSRSYPGLPQSPGFLRDV GSLTLSGTAEADNREAHCEWIDGVTRIQLRRAASDIGHVGDDQELTTLRAAVHQAPYP VWLQSDDARVTWTNLAYDRLNQKIRGRGNDTSAPLFPNLDAPMNSGRAERISIELPET DKKLWYNVSTTETEAGWLCHAMDVNAVVDAEIAQRNFVQTLAKTFAQLSIGLAIFDRN RQLVLFNPVLIDLTALPASFLSSRPNMMSFFDRLRDQRMMPEPKNYSSWRHQMADLLE AAAEGRYQETWSLPSGSVYSVSGRPHPDGAIAFLFEDITAEITLTRQFRSELELGQSI LDHIDDAFAVFGADGSMVYSNTAYHTMWKTDPDASFAKITITDACRTWQELSGPTPTW GEVRDFVAGGTSDRSDWWSRVDMRNGEQLLCRVQSLQNGSVMVRFQQIDLPLAPPEQE RFAVLKDS" /EC_number="2.7.3.-" CDS 1970649..1971125 /locus_tag="Silicibacter_1811" /function="COG: Predicted ATPase or kinase" /translation="MTQRSATFRLPSSDATTELARHIARILVPGDVVLLQGPIGAGKT HFARSLIQSLMEVPEDVPSPTFTLVQVYNVATGELWHADLYRLSHVDEVEELGLLAAF EDAICLIEWPEKLEDLRPASALTMELSLDEDHDDARMAELMWTDASWDARLEGIAP" /product="conserved hypothetical protein TIGR00150" /transl_table=11 /note="identified by match to putative ortholog SPO3869 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1971122..1972120 /locus_tag="Silicibacter_1812" /function="COG: Predicted aminoglycoside phosphotransferase" /translation="MTSREDEIRDFLATHGYADWNRTPLAGDASSRRYQRLRSPTGAK AVLMDWSPEEGGDTQPFVDLAQYLRNLDISAPEIYAEEHARGLLLIEDLGDALFTEVI NNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAE DNRKRFEHRFAQILSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH RAYDLVSLLQDARRDVPAQVEAQMIDHYIQATGVDESHFRSAYAVIAVQRNMRILGIF ARLSQRFGKRHYIEFVPRVWAHFERGLAHPALASAAEEILNALPAPAPEVLERLRA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3870 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1972117..1972797 /locus_tag="Silicibacter_1813" /function="COG: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)" /translation="MTAPNVVMIFAAGFGTRMGALTADKPKPMIDLCGRPLIDHALTL AHALNPERVVINTHYKAEVLERHLEGRDVLISHEDKEILDTGGGLKLARALLDASVSY TLNPDVAWRGPNPLSVLRDAWRPADMDALLLCVPTARAVGRLGSGDFSTDSRGCIRRG GDMVYTGAQIISLDTLDRVSESAFSLNAIWDQLIPEGRATAVEYPGHWCDVGRPEGLK LAEEMIAE" /product="nucleotidyltransferase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3871 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1972799..1975732 /locus_tag="Silicibacter_1814" /function="COG: Inactivated superfamily I helicase" /translation="MFDPSQTKPRLFAVPCGVDFPRALYDGLTARFADALPEELARVE LILNTERMQRRVRQLFDAGPARLLPRISLLSGLNKEANLRGLPPALPPLRRRLELSQL IAKLLDAQPDLAARASLYDLSDSLAELIDEMQSEGVSTDQIRALDVSDMSGHWKRAQD FIGIADQFVDMHEGALDVNARQRQVVMDLIAEWEQTPPTHPIILAGSTGSRGTTLLLM EAIARLPQGAVVLPGFDFDQPEPVWESLTDGLVAEDHPQYRFHKLMRDLDLRPSDICR WVDTTPQSPARNRLISLALRPAPVTDAWMSEGPYLKDLDQATEALTLVEAANPRSEAL AIALRLRQAAEDGQTAALITPDRMLTRQVSAALDRWDILPDDSAGLPLQLSPPGRFLR HVADLFCRPLQADMLLTLLKHPLTHSGAERGLHLLHTRDLELHMRRNGPPFPDCESLS AFGSTRDLQPGWSDWLAQSFAGRDRTGTRALSDWVSDLRETAEGIAAGSQVGGTGELW DKKAGNAARDVLEELQAQSPHGGDMTARDFADLLGALLSQGEVRDRDAPYGSIMIWGT LEARVQGADLVILGGLNEGSWPEAARPDPWLNRKLRHEAGLLLPERRIGLSAHDFQQA VAAPEVWLTRAVRSEEADTVPSRWLNRMTNLLGGLPDQGGQAALSAMRMRGQVWLDWA SVLDAPVPTPLSPRPSPRPPVAARPRRLTVTEIPKLIRDPYAIYAKHVLRLKPVDPLL QEPDALLRGTIIHKVLEDFIKSAQEQPENLSARHFIDHARRVLETEVPWPVARTLWLT RLKKVAEDFVTGERQRQSRARPSGFEKSGQVRLDPLDFEIAAKADRIDVDERGLLHLY DYKTGDPPSEKQQKSFEKQLLIETAMAEQGAFSDYGAARVERALYIGLKPPVKEVAAP ILDEPPAKVWAELRSLVEAYFDAEQGFSSRRMVHRDDFAGDYDHLARYGEWDRSSDPV PEDLT" /product="hypothetical protein" /transl_table=11 /note="homology to recB, belas" /note="Hypothetical protein" CDS 1975729..1979094 /locus_tag="Silicibacter_1815" /function="COG: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)" /gene="uvrD" /translation="MSRNAASEAQFRAARPDASTWLAANAGSGKTKVLTDRVARLLLR GVEPQHILCLTYTKAAASEMQNRLFQRLGEWAMLPDAKLRAALVDLGAEDAAIGDGLA QARTLFARAIETPGGLKIQTIHSFCSSLLRRFPLEAGVSPQFTEMEDRAAAMLRAEIA EDMAQGPDAHVVEAASFHIGGLDFETLTAEICRRQAGFDPALDHNRLGEVFDLPAGYD RSALQAEVFLGNEEEILSRTIEMLKSGGATDTKNADKLARITAVTPDVLPLLEDVFLT GKSAKDPFSAKIGSFPTKKLRESNGVLMDQLEPFMARVEAARPKRLALDAMEKSIVLH DFARVFLPEYERRKQLRGWLDFDDLIVKARNLLNDPAVAAWVLYRLDGGIDHILVDEA QDTSPVQWDVVEKLAQEFTAGEGARADVERTIFVVGDKKQSIYSFQGADPDAFDRMQA EFGNRLKDTGEGLQNASLAFSFRSSAAILGLVDVVFDGEHRAGFADDAKHQAFKSDLP GRVDLWPLVEKTDDEEERDWTDPVDRPSPRHHSVILAERIANHIKEMIAQGVTIPEDG PERGTFQRRPVHAGDFLILVQRRSDLFSEIIRACKAAGLPIAGADRLKVGAELAVKDI AALLRFLALPEDSLSLAEALKSPIFGWSEQQLFDLAHRRSEMHLWPALRARSEEFPQT MEILNDLRRQADFLRPYDLIERILTRHLGRAKILGRLGTEAEDGINALLSQALAYERT EVPSLTGFLVWMQTDDLEIKRQMGAASSMIRVMSVHGSKGLEAPIVILPDTTKRRPSP AAEVMEVDGTPLWRMSSDQMPPAMDAARVFAQEKQANERLRLLYVALTRAEKWLIVAG AGDLDKGGDSWYQRVEAAMKTMGALPYDAPGGEGLRWAHGDWEAPVFVPSDLTEEDEI TLPEVFRRAAPAYVAPAATLRPSEDLGGAKALPGDSGLSEEDAKARGTALHLLLEHLP KLPEEDWDNRAEAIAQHEDWKALLAEARQVLCSDDCADIFAPGTLAEVPVSADLGTVR LHGIIDRLVITPDRVLAVDFKSNAVVPQSAEACPEGLLRQMGAYDVALRQIYPDRQIE TAILWTRTATLMSLPVTLITQARERAGFQRLEP" /product="ATP-dependent nuclease subunit A." /transl_table=11 /note="UvrD/REP helicase, UvrD/REP helicase, belas" /note="Conserved hypothetical protein" CDS 1979156..1979476 /locus_tag="Silicibacter_1816" /function="COG: Thiol-disulfide isomerase and thioredoxins" /gene="trx" /translation="MSTVAVTDATFDAEVKNSDVPVVVDFWAEWCGPCKQIGPALEEL AAEYGDKVKIAKVDVDSNPNAAAAMGVRGIPALFVFKDGQVVSNRAGAAPKAALKSWI DESI" /product="thioredoxin" /transl_table=11 /note="identified by match to putative ortholog SPO3874 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1979617..1979811) /locus_tag="Silicibacter_1817" /translation="MANASNIIAPAGSVAVLRAVDFFFNLRSNFADWNEARITRKALS QLSDAQLEDIGLTRADIAAL" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Protein of unknown function DUF1127, Domain of unknown function (DUF1127)" /note="Hypothetical protein" CDS 1980047..1980604 /locus_tag="Silicibacter_1818" /function="COG: ATP-dependent protease HslVU (ClpYQ), peptidase subunit" /gene="hslV" /transl_table=11 /note="identified by match to putative ortholog SPO3880 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" /product="ATP-dependent protease hslV" /translation="MAEDQFPGWHGTTIIGVRKGDEVVVAGDGQVSLGQTVIKGSARK VRRLSPGGYDVVAGFAGSTADAFTLLERLEAKLEATPGQLQRASVELAKDWRTDKYLQ KLEAMLIVTDGKDLYVITGAGDVLEPEHDVAAIGSGGNFALAAARGMMDSDRDAETVA RDAMAIASDICVYTNGNLTVERIGK" /EC_number="3.4.25.-" CDS 1980601..1981656 /locus_tag="Silicibacter_1819" /translation="MISRDDLRAAVGSGLLTEAQAASLSALADSRRGAREGLAPGDEP FELFKGFNEIFIVIGLVILAMGWIAVNTASMFTEIVNYRTQATTAALFGAAILWGLSE YFIRRRRMVAPAIALSVMFAGNAAMGFVAQYAQPFMIAQQDYSSLPMALGLSTLALFV FWGRFRVPFAMALIALGLFAVALIVAADQSGVPTELGDLFLLSANGPFAWITLVVGLL VFAVAMAFDLSDPHRVTRRSAQGFWLHVVAAPALVNTIALSLLTSDQGVLLALVLGCF ALIAIVIDRRSFLITAIGYIVALSTTVFDSEGTGISILALGVVLVILGAFWARIRAAL LSLLSGVLPLHRLPPSH" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 1981672..1982982 /locus_tag="Silicibacter_1820" /function="COG: ATP-dependent Zn proteases" /gene="hslU" /translation="MTDLTPREIVSELDRFIIGQKDAKRAVAVALRNRWRRKQLPDDL RDEVHPKNILMIGPTGVGKTEISRRLAKLARAPFIKVEATKFTEVGYVGRDVEQIVRD LVDTAIVQTREHMREDVKAKAHKAAEDRVLEAIAGTDARESTLEMFRKKLKAGELDDT VIELDIADTSNPMGGMFEIPGQPGANMGMMNLGDLFGKAMGGRTTRKKLTVAESYDVL IGEEADKLLDDETVNKAALEAVEQNGIVFLDEIDKVCARSDARGGDVSREGVQRDLLP LIEGTTVSTKHGPVKTDHILFIASGAFHIAKPSDLLPELQGRLPIRVNLRALSEEDFV RILTETDNALTRQYEALLGTEKVKVTFTKDGIHALAQIAAEVNHTVENIGARRLYTVM ERVFEEMSFAAPDRSGEEIIVDEPFVTKNLGELTKSTDLSRYVL" /product="ATP-dependent hsl protease, ATP-binding subunit HslU" /transl_table=11 /note="identified by match to putative ortholog SPO3882 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1983062..1984183 /locus_tag="Silicibacter_1821" /translation="MKNAMLVLCVFLGLSACADRDLMPIVPEAVEIGTPYTVFSTTTR AQEADGTYGFRRSEQLRMMEMTVTIPPNHSPGELSYRYKNPDPHKNFAIAEELPVASV SDLRARFLREQRENNWPLREVTIFVHGYNSTHPETAYRSAQMAHDVELPGSLVMYSWP SRGRAFGYAYDIDSMLFARDGLEETVRRVKQAGAERIILVAHSMGTALAMEMLRQADL RNPGWAARTLNGGVILISPDLDVDVFESQMMDLKQVPQPFGVMVSEKDHILNISGRLR GTSEGERLGNIKSAERLMKWPIEVIDLTAFNADAASGHFVAATSPSLLAVIRSASNVS RLFGPVDPTLFQQILPQSQTIVTDHGKLMLARQQRQEER" /product="lipoprotein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3883 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(1984191..1984793) /locus_tag="Silicibacter_1822" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MTRRKLTEDEIDLWQQVVKHAERLHANREKKGGDHADPPTPLPK PKPRRSAPAPLPQFEVGSKARAKLPGHDLKASPARKLATDPLRMDEKAFRRMKRGKLK PEGKLDLHGMRMDSAHGALTRFILSAQASNKRLVLVITGKGKDRDEPGPMPVPRGVLR HQVPQWLTLQPLAQAVLQVTPAHISHGGEGAYYVYLRRTR" /product="smr domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3884 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1984793..1985851) /locus_tag="Silicibacter_1823" /function="COG: Membrane-bound lytic murein transglycosylase" /translation="MTETLRHGLGAALLTAALFSGAGAQSETGPSLRILEFTELSDWD LDNHVEALRVFRETCMDMDGADWQSLCAMAQNADDSGARAFFELFFRPVLIEDGKEGL FTGYFEPELNGARQRGGRFQYPVYRMPPEARQSSTWLSRRDILTSGVMDGRGLEIAWV DDPVELFFLQIQGSGRIKLQDGSVIRLGYGGANGHPYRSIGQEMVRRGIYNLHQVSAG VIQNWVRRNPGPGMELLMHNPSYVFFREVRKVPSNRGPLGAMNRSITPMRSIAVDPAY TPLGAPVWIEKNGQTKMRRLMIAQDTGSAIKGAQRADIFFGPGDEAGRQAGQLRDPGR MMVLMPIQRAYAMLPDDL" /product="MltA/3D domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3885 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1985848..1986504) /locus_tag="Silicibacter_1824" /translation="MESPLIELLVLAGIAVFLILRLKSVLGTREGFEKPPLASSETRA PQRKFEVIEGSPDDDIIAYVDEGSPQSKALSDMKRSDSSFQVAEFVQGARGAYEMILM GFETGELDGIQPFISDDIFQSFVDAVSAREDQGLTIEAEFIGVRETSIIDATFDTATS TAEITVRFVGELTSAVRNRAGEIVEGDPKAVKRQKDTWTFSRQMGTGDPNWLLVATDA " /product="transporter, Tim44 family" /transl_table=11 /note="identified by match to putative ortholog SPO3886 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 1986619..1987116 /locus_tag="Silicibacter_1825" /gene="fxsA" /translation="MPLFLAFLLVPIIEIALFIQVGGLIGLWPTLGIVVLTAFLGTWL VKTQGRLALGQLRGSFERLSDPTEPLAHGAMILLAGALLLTPGFFTDAFGFLLLVPGF RTRAFAYLRTKVTVASFQMGQDPRQHPQHPRKSPQGDVIDGDYEDVTPRPRNEGPSGW VEGPK" /product="FxsA" /transl_table=11 /note="identified by match to putative ortholog SPO3887 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1987181..1987675 /locus_tag="Silicibacter_1826" /gene="secB" /translation="MAENGAAEGTAQQPQVQMNILGQFIRDLSFENVMAQKGVGGEVQ PDVNVQVALDAKKRSTENQYEVITKLNIESKNKAGGEVLFVLELEYVGIFNIAGVPED QLHPFLLIECPRMLFPFLRRIVSDISRDGGFPPLNLDNIDFVAIYRNELARRQAEAPA EVTN" /product="protein-export protein SecB" /transl_table=11 /note="identified by match to putative ortholog SPO3888 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1987735..1988466) /locus_tag="Silicibacter_1827" /function="COG: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases" /gene="dnaQ" /transl_table=11 /note="identified by match to putative ortholog SPO3889 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="DNA polymerase III, epsilon subunit" /translation="MREIVLDTETTGFDPFSGDRIVEIGAVELLNHMPTGETFHVYIN PQRSMPHEAFGVHGIGPDLLEPPQPPAPGQVILKDKPLFAEVGQAFLDFVRDSKMVIH NASFDMKFLNAELGWMNLPQLPMDQAIDTLAMARKRFPGSPATLDALCRRFGIDNSNR TLHGALLDSEILADVYLELIGGRQPDFGLSAQSSGGQNAVDTNWRPAPRETPLPSRLT AEEKAAHDEFVGKLGEDALWAVTSE" /EC_number="2.7.7.7" CDS complement(1988459..1989052) /locus_tag="Silicibacter_1828" /function="COG: Dephospho-CoA kinase" /gene="coaE" /transl_table=11 /note="identified by match to putative ortholog SPO3890 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="dephospho-CoA kinase" /translation="MVFSLGLTGSIGMGKSTTAALFKEAGCAVWDADAAVHALYAKGG AAVTPIGDAFPEVTAAGFVDRDILKELISLNKSVLKVLEDIVHPLVQADRQRFRIAAE ADILVFDIPLLFETGSQAEMDAVACVFVSPEMQRQRVLARGTMTEPQFEQILAKQMPI EEKLARSDFRIETDTMEHARAQVTAVVEDIKRRMAHA" /EC_number="2.7.1.24" CDS complement(1989052..1989882) /locus_tag="Silicibacter_1829" /function="COG: Shikimate 5-dehydrogenase" /gene="aroE" /transl_table=11 /note="identified by match to putative ortholog SPO3891 from Silicibacter pomeroyi DSS-3, Quinate/Shikimate 5-dehydrogenase, belas" /note="Conserved hypothetical protein" /product="shikimate 5-dehydrogenase" /translation="MTENRIPLAGVIGCPIAHSKSPQLHRHWLKTYGVDGHYMPMHVE PEDLESVVRMMPRMGFVGANVTIPHKQSIMEIADKVTDRAKLMGAANTLIFHEDGAIV ADNTDGYGFITNLHEGAPDWDAKSGPATVFGAGGASRAVIASLIEAGVPEIRLTNRTR SRAKEVAQTFGSKVTAVDWVEAGNVIEDASLVVNTTSLGMTGQRRLRVPLDGLHSGIV VTDLVYNPLKTELLQAAEEAGCTVVDGLGMLLHQAVPGFERWFGQRPEVNSAARDAIL " /EC_number="1.1.1.25" CDS complement(1989879..1990478) /locus_tag="Silicibacter_1830" /function="COG: Nucleotide-binding protein implicated in inhibition of septum formation" /gene="maf-1" /translation="MSTHILLASGSEIRAKLLRQAGVDFRVEVARVDEDAIKTALEAD GASPRDIADTLAEAKARKVSGKFPEEMVLGCDQVLDFEGTLLSKPKDKNQALQQLKAM RGKRHMLLSAAVIYCDAKPLWRHVGQVRLVMRMASDAYLESYVERNWESIRHAVGAYK LEEEGVRLFTTIDGSYFNVLGLPMLELMNYLGLQGIIEQ" /product="Maf" /transl_table=11 /note="identified by match to putative ortholog SPO3892 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1990897..1991352 /locus_tag="Silicibacter_1831" /translation="MDLTDLMFTLYPYVKSLHIMAVISWMAGLFYLPRLFVYHVEEAE KVKDVAPIFLTMEHKLLRVIMGPASVVTWIAGLFMVFTPGLVDWSYVWPWTKGASVLA MTWFHHWLMFRHKDFKEGKNTITGRQYRLMNEVPTLLMVVIVVSVIFKF" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3893 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 1991483..1992754 /locus_tag="Silicibacter_1832" /function="COG: Transcription termination factor" /gene="rho" /translation="MTEQSLNLSDLKAQSPKALLAMAEELEIENASTMRKGEMMFQIL RERADEGWNIGGDGVLEVLQDGFGFLRSPEANYLPGPDDIYVSPDMIRQFSLRTGDTV EGQIKAPLENERYFALTTVTKINFEEPEKARHKIAFDNLTPLYPDERLQMEIEDPTVK DRSARVIDLVSPIGKGQRSLIVAPPRTGKTVLLQNIAHSIEQNHPECYLIVLLIDERP EEVTDMQRSVKGEVVSSTFDEPAARHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLG RAFNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDE VIFEEFKGTGNSEIVLDRKIADKRVFPAIDILKSGTRKEDLLVDKGDLAKTFVLRRIL NPMGTTDAIEFLLSKLKQTKTNSEFFDSMNT" /product="transcription termination factor Rho" /transl_table=11 /note="identified by match to putative ortholog SPO3894 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1992785..1994071 /locus_tag="Silicibacter_1833" /function="COG: Predicted GTPase" /gene="trmE" /translation="METIFALATAQGKAGVAVIRVSGPHAIEIGEKLTRRTLPARGMI FSKLKDSAGEILDEALVLSFTSPDSFTGENIVEFQLHGSIAVVSAVMSAIEETGVARL ADPGEFTRRALDNGKLDLTQVEGLADLIDAETEAQRKQAQVILAGTLGDLADRWRTDL IRAASLIEVTIDFADEEVPVDVTPEVKQLLSGVLHDIEKEVDGVAIAERIREGFEVAI VGSPNVGKSTLLNALAGRTAAITSEYAGTTRDVIEVRMDLAGLPVTLLDTAGLRETDD HVEGIGIRLAQERAERADIRVFLAEEDESFSIQMREGDLRLLPKADERRSAKGAISGR TGQGVDDLVSRISDTLRNRTAHDGIATRARHRETMNRAVLSLRQAIEVVEQGPEFYDL AAEDMRSAIRALELLVGRINVENLLDEIFSSFCLGK" /product="tRNA modification GTPase TrmE" /transl_table=11 /note="identified by match to putative ortholog SPO3895 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1994075..1995958 /locus_tag="Silicibacter_1834" /function="COG: NAD/FAD-utilizing enzyme apparently involved in cell division" /gene="gidA" /translation="MFHVKHSHYDVVVVGGGHAGTEAAHASARMGVRTALVTLRRDGI GVMSCNPAIGGLGKGHLVREIDALDGVMGRVADLAGIQFRLLNRRKGPAVQGPRAQAD RSIYRKEMLRATEAQSNLDIIEGEVVDFLMESPTRVRGIILDDQSEIRAECVVLTSGT FLNGVIHIGNKSSSGGRMGDRPSIKLAERLKSFELPLGRLKTGTPPRLDGRTINWDIL DSQPGDEDPTLFSFLSTNTSAPQIACGITHTNEKTHEIIRDNLELSAMYGGHIEGVGP RYCPSIEDKIVRFADKTSHQIFLEPEGVNDHTVYPNGISTSLPEDVQVDYVRSIVGLE NAEVLQPGYAIEYDYVDPRALRSTLELRDVEGLYLAGQINGTTGYEEAAAQGLVAGLN AASHRLKQQEIVFGRSNSYIGVMIDDLITNGVTEPYRMFTSRAEFRLSLRADNADQRL TPIGYDLGCISEVRRSEFDRKMDAITRTKSALTSVLLTPKQLLEAGIQVNQDGNKRNG LDVLAFPKVEFDDILPLFPELADTETSIREQVTRDSLYANYIARQEKEVASLKRDEQY RIPRDFSYEIDGLSMELRQKLERSRPESLAQAARIDGMTPAALALMLGSLKKLSRGES KAS" /product="Glucose inhibited division protein A." /transl_table=11 /note=", Glucose-inhibited division protein A subfamily, Glucose inhibited division protein A, gidA: glucose-inhibited division protein A" /note="Conserved hypothetical protein" CDS 1996565..1997377 /locus_tag="Silicibacter_1835" /function="COG: ATPases involved in chromosome partitioning" /gene="parA" /translation="MSDFSRFGVPRIIAIANQKGGVGKTTTAINLAAALVEEGMRVLL VDLDPQGNASTGLGVEVDDREHTTYDLLVEEAELSQVIRETDLEDLCIVPANVDLSSA DIELFSNEKRSFLLHDALRQPAMTEYDWDYILIDCPPSLNLLTVNAMVAAHSVLIPLQ SEFFALEGLSQLMLTIREVRQAANPQLRIEGVVLTMYDRRNNLSQQVEQDARDNLGDL VFRTKIPRNVRVSESPSYAMPVLNYDPSSLGAKAYRQLAGEIIANHQDIAAQ" /product="chromosome partitioning protein ParA" /transl_table=11 /note="identified by match to putative ortholog SPO0003 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 1997396..1998295 /locus_tag="Silicibacter_1836" /function="COG: Predicted transcriptional regulators" /gene="parB" /translation="MADKKTKPRGLGRGLSALMADVNADPVSTEGGRQPRNAEILVPI EKVQANPDQPRRQFLQEDLDDLTASIKEKGVLQPLIVRPRDGGIYEIVAGERRWRAAQ AAQLHEVPVLIRDYSDVEMLEVAIIENIQRSDLNALEEAQSYKQLMDKFGHTQEKMAE ALGKSRSHIANLVRLLHLPEDVQSLVLDRKLSAGHARALITSDNASELAKKIVKGGLS VRATESLVKKDAAGTTSSSNSRKAKPQADKDADTRALENDLSAMIRMKVSIDHKPGGE SGVVTISYETLDQLDDLCNLLSR" /product="chromosome partitioning protein parB" /transl_table=11 /note="identified by match to putative ortholog SPO0004 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1998285..1998638) /locus_tag="Silicibacter_1837" /translation="MRFIYLCLGLTSVLLAGVGVVLPLLPTVPFLLLAAFFFARSSER LHDWLLSHATFGPMILDWNERGAIGPSAKKAATLSVAAVFSISIILNVPTHVLLIQGL TLGGVMIFIWSRPNG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0005 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(1998642..1999796) /locus_tag="Silicibacter_1838" /function="COG: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases" /translation="MDDWRNGGFGLYVHWPFCQAKCPYCDFNSHVVSQIDQSAWVTAY QAELRRMGELLPDRLLNSIFFGGGTPSLMHPDTVAAVIEAARENWTFANDIEISLEAN PGSVEAGRFAGYRDAGVNRISMGIQALNDEDLRRLGRIHSVEEARKAFDVARNCFDRV SFDLIYARQGQTLNAWKAELSEALSMAIDHLSLYQLTIEDGTAFGDRYARGKLRDLPT DDHAADMYLATQEICELYGLPGYEISNHARPGAESRHNLIYWRYGDYVGIGPGAHGRI TLNGTRFATEAPRAPGAWLSAVEQGNGLLPFDALNSEDQVNEHMMMGLRLFEGVDLDR HTALAQKPLSPSKIQELCNLGMLDLDGSRLRATSQGRAVLNAVLRELLTD" /product="oxygen-independent coproporphyrinogen III oxidase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0006 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(1999789..2000403) /locus_tag="Silicibacter_1839" /function="COG: Xanthosine triphosphate pyrophosphatase" /translation="MTRKFNGDTLLVATHNEGKLGEITEILAPFGVKVVGAGELNLPE PEETEDTFVGNARIKAHAAAKATGLPALSDDSGITIDALDGAPGVYTADWAETNNGRD FMKAMTRANDEITAKGPDAPRTAQFRCTLVLAWPDGHDEVFEGVMAGSLVWPIRGEGG FGYDPMFMPEGYDVTCAQLDKDEKNRISHRGRALAKFVQGCFGG" /product="non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family" /transl_table=11 /note="identified by match to putative ortholog SPO0007 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2000400..2001113) /locus_tag="Silicibacter_1840" /function="COG: RNase PH" /gene="rph" /transl_table=11 /note="identified by match to putative ortholog SPO0008 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ribonuclease PH" /translation="MRPSGRALNEMRSVSIETGFTKHAEGSCLIKMGDTHVLCTATIE DRVPPFIKGSGLGWVTAEYGMLPRATNTRMRREAASGKQGGRTVEIQRLIGRALRAGV DRVALGERQITVDCDVLQADGGTRCASITGGWVALRLAVNKLMKAGDVTMDPLVDPVS AISCGIYAGQPVLDLDYPEDSEAGVDGNFIMTGSGKLIEVQMSAEGSVFSRDQMNELM DLAAKGTSELAEMQKAACA" /EC_number="2.7.7.56" CDS 2001252..2002316 /locus_tag="Silicibacter_1841" /function="COG: Transcriptional regulator of heat shock gene" /gene="hrcA" /translation="MTDANSILQDMNDRSREVFRILVENYLDTGGPVGSRTLTRSLSE KVSAATVRNVMQDLEYLGLLDSPHVSAGRIPTQMGLRLFVDGLLQMGDPSRQDREMID RTLGDNSSDVGGMLDRVGAALSGVTHGASLVLTPKHEAELRHIEFVSLAQDRALVVLV FSDGHVENRLFTPPPGQTPSSMREAANFLNALIEGRTLSDVRKDVQGEIERRRQEIDS LAHEMIESGLAAWEDEGSDQARLIVRGRANLLSEDGAPDELEKIRSLFDDLERKRDIA EFLELTEEGDGVRIFIGSENKLFSLSGSSLVVSPYMNADRKIIGAVGVIGPTRLNYGR IVPIVDYTAQLVGKMVSDRS" /product="heat-inducible transcription repressor HrcA" /transl_table=11 /note="identified by match to putative ortholog SPO0009 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2002326..2002889 /locus_tag="Silicibacter_1842" /function="COG: Molecular chaperone GrpE (heat shock protein)" /gene="grpE" /translation="MAEPKNEDFLDDIEAAEAEELSAQTEEFDDEALELDSLRAERDD YKDRFMRALADAENARKRGDKARREAEQYGGSKLARDMLPVYDNMKRAVEAATEEQKA VSAALIEGVELTMRALLDVFQKHGIQVVSPEVGDRFDPQVHEAMFEAPVPGTKAGDII QVSAEGFMLHDRLLRPAQVGVSSTPAS" /product="co-chaperone GrpE" /transl_table=11 /note="identified by match to putative ortholog SPO0010 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2002976..2005615) /locus_tag="Silicibacter_1843" /function="COG: Mismatch repair ATPase (MutS family)" /gene="mutS" /translation="MSVTPMMAQYLEIKAQYPDALLFYRMGDFYEMFFEDAVNAAEAL DIALTKRGKHEGEDIPMCGVPVHAAEGYLLTLIRKGFRVAVGEQLESPAEAKKRGSKS VVKRDVVRLVTPGTLTEDSLLEARRHNFLVAYSELRDQAALAWADISTGAFHVMPVAR VRLSPELARLAPSELIVADGPIFDATLPLAEEYKIPLTPLGKASFDSTAAEKRLCHLF NVSALDGFGTFNRAEISAMGAVVDYLEITQKGKLPLLQPPLQESEDRTVQIDASTRRN LELTRSLSGGRAGSLLSVVDRTVTPGGARLLEQRLSSPSRNLDVISARLEALDTIVED PIRCDTLRGLLRKTPDIDRALSRLALDRGGPRDLAAIRNALSQGEDIERALQDPDLPT LLRDAAHSLEGFQDLLSLLDAALIAEPPLLARDGGFIAAGYDRELDEARTLRDEGRSV IAGLQKKYAEHTGISSLKIKHNNVLGYFIETTSTHAAKMQSAPMSDTYIHRQTTANQV RFTTVELSEIETKILNAGNLALEIEKRLYQRLSGAILDSAARLNQAARGFAEIDLVTA LADLARAENWTRPRVDTSRAFHVDGGRHPVVEQALRHQGGDSFVANDCDLSPQDGAAI WLLTGPNMAGKSTFLRQNALIAVLAQMGSYVPAEAAHIGMISQLFSRVGASDDLARGR STFMVEMVETAAILNQADDRALVILDEIGRGTATYDGLSIAWATLEHLHEVNRSRALF ATHYHELTQLATKLTGVENATVSVKEWEGEVIFLHEVKKGAADRSYGVQVAQLAGLPA SVVARARSVLDMLEKSSREGGGAGKVQIDDLPLFAAAPAPQPKPAQGPSPVEKLLEEI FPDDLTPREALETLYRLKDVSKG" /product="DNA mismatch repair protein MutS" /transl_table=11 /note="identified by match to putative ortholog SPO0011 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2005736..2006584) /locus_tag="Silicibacter_1844" /function="COG: Flagellin and related hook-associated proteins" /gene="fliC" /translation="MTSINTNPGAEIALRVLSDRQVEKEEVQEDVSTGKEVDKAKDSA AIWAISEIMGSDLAGFEATSKGLNIGEATVAVASAGAEQITSLLTDMKELTIQANSGV SDYSKIEEQLAQKTEQINTIISSSGFNGVNLLATDTDGNGGTSLTVAASQDRSGDDAP TLSSITVDSVDFEGSASFDINNRTTVTDAASARTALGEIEGFLRYATEGAASLGAGAQ QMAEQDVFLDKLSDAVRLGISELTDTDMEDAATRYEALSVQEQLSGLSLSIANASPGS LRSLYS" /product="Flagellar filament 33 kDa core protein (Class B)." /transl_table=11 /note="Flagellin, N-terminal, homology to flagellin gene, belas" /note="Conserved hypothetical protein" CDS 2006910..2009165 /locus_tag="Silicibacter_1845" /function="COG: Malic enzyme" /gene="maeB" /transl_table=11 /note="identified by match to putative ortholog SPO0012 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="NADP-dependent malic enzyme" /translation="MPKAKITDEEALAFHLEPSPGKWEVTATVPMTTQRDLSLAYSPG VAVPCEAIAENPETAYDYTNKGNLVAVISNGTAVLGLGNLGALGSKPVMEGKSVLFKR FADVNSIDIELDTEDPDEFIKAVRLMGPTFGGINLEDIKAPECFIIEQKLKEEMDIPV FHDDQHGTAVICAAGLINALHLSGKKIEDVRIVLNGAGAAGIACIELLKSMGARHENC IVCDTKGVIYQGRTEGMNQWKSAHAVKTELRSLEEAMNGADVFLGVSVKGAVTQDMVK SMADNPVIFAMANPDPEITPEEAHEVRVDAIVATGRSDYPNQVNNVLGFPYLFRGALD IHARAINDEMKIACAHALARLAREDVPDEVALAYGKSLSFGRDYIIPTPFDPRLIHRI PPAVAKAGMDTGVARRPIIDMDAYEHGLRGRMDPTQSILRGLNARARAAQSRMIFAEG DDPRVLRAAVTYQRSGFGKALVVGRQDDVKAKLEEAGLGDAVRELEVVNAANTHHFET YKDFLYERLNRKGFDRKDIHRLVGRDRHVFSALMLAHGHGDGLVSGATRKSAHVLDRI NHVFDADAEHGAAGVTALLHKGRIVLIGDTLVHEWPDENDLATIAERAAGVARHMGLD PRVAFVSFSTFGYPVSERAEKMHIAPTVLDKRGVDFEYEGEMTVDVALNAKAQEHYPF QRLSGPANILVVPARHSASISVKLMQEMGGATVVGPILSGVDKPIQICSTTSTANDVL NMAVLAACNIG" /EC_number="1.1.1.40" CDS 2009185..2010057 /locus_tag="Silicibacter_1846" /function="COG: Sugar kinases, ribokinase family" /gene="rbsK" /transl_table=11 /note="identified by match to putative ortholog SPO0013 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ribokinase" /translation="MAIWNLGSINIDMVYSLPHMPQPGETLAATSFDQGLGGKGANMS VAAARAGAHACHIGAIGPEGKWCVDRLMEYGVDTRHIVQSDTATGHAIIAVDPAGENQ IILYPGANRGLGADQIGQALSAANAGDILLMQNETNMQAEAAEMGRKLGLRVAYAAAP FDAAAVQAVLPFVDLLFLNEVEAAQLQDATGKPPQDLGVDDVIVTLGAEGARHFDGRT GAVSDVAAQKVTAVDTTGAGDTFTGYVLAALDRGLPMAQAMAQASRAGALMVTRHGAA DVIPDLKEVQDAKF" /EC_number="2.7.1.15" CDS complement(2010118..2010789) /locus_tag="Silicibacter_1847" /function="COG: Peptide methionine sulfoxide reductase" /gene="msrA-1" /transl_table=11 /note="identified by match to putative ortholog SPO0014 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="methionine-S-sulfoxide reductase" /translation="MGRLDTLKHFTLAALIIVGVLTKGSALRAQTQDTLIVAGGCFWC VESDFESVRGVSEAISGYTGGTTENPTYKQIGSGRTGHYEAVKILFDPTIVSRESLLD LFFRSIDPTDTGGQFCDRGAPYRTAVFVSNEDEKAIAQAVKAEAEAELGQQIVTPILE ASPFYEAEAYHQDYYKGEGLVLTRFGPLRQSKAYVRYRKACGRDARIAELWGRDAPFI GSYGF" /EC_number="1.8.4.-" CDS complement(2010928..2011209) /locus_tag="Silicibacter_1848" /function="COG: Putative sterol carrier protein" /translation="MLEQIATDIRKGLDGKSFDGSLKFDCGSDGVIVLDNGRVTTDEL STDCTLRLSTENLKKLLRGQLNPMTAVMMGKIKISGDMGVAMKLGKLIG" /product="sterol carrier family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0016 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2011300..2011686) /locus_tag="Silicibacter_1849" /gene="orf4" /translation="MKPLLVSALMVVCGSAALADFEICNETGNEAFASIGYKDGEEWV SEGWWTLQPGECAIPIVGDLKNRYYYIRAESKTGNWTGDYSFCYINDVFTIRGDENCT ARGYKTGGFFEVDTGNSLDWTQNLTD" /product="hypothetical protein" /transl_table=11 /note=", Protein of unknown function DUF1036, Protein of unknown function (DUF1036)" /note="Hypothetical protein" CDS complement(2011788..2012249) /locus_tag="Silicibacter_1850" /translation="MSMDDDFEEEFLEEDLEEELDMFVEAQDAVWTDVVTELKAGKKT SHWMWFVFPQLASLGQSHMSQLYGLEDLNEAQAYLAHPVLRERLIAACDLMLARNGTT AAEILGEIDAKKLRSSMTLFGAVTDAPKQCGEIIKVFFEGTPCPLTLGEIG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0017 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2012249..2013472) /locus_tag="Silicibacter_1851" /function="COG: Argininosuccinate synthase" /gene="argG" /transl_table=11 /note="identified by match to putative ortholog SPO0018 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="argininosuccinate synthase" /translation="MSAPKKVVLAYSGGLDTSIILKWLQTEYGCEVVTFTADLGQGEE LEPARKKAELLGIKPENIFIEDIREEFVRDFVFPMFRANAVYEGLYLLGTSIARPLIS KRLVEIAEATGADAVSHGATGKGNDQVRFELSAYALNPDIKVIAPWREWDLTSRTKLL EFAEANQIPIAKDKRGEAPFSVDANLLHTSSEGKVLEDPAEMAPDYVYQRTVNPEDAP NEPEFIEITFEKGDAVAINGEAMSPATILTKLNEYGRKHGIGRLDFVENRFVGMKSRG IYEAPGGDILLEAHRGIEQITLDSGAGHLKDSIMPRYAELIYNGFWYSPEREMLQALI DESQKHVTGTVRVKLYKGSAKTVGRWSEHSLYSEAHVTFEEDAGAYDQKDAQGFIQLN ALRLKLLAARNRRVK" /EC_number="6.3.4.5" CDS 2013603..2014358 /locus_tag="Silicibacter_1852" /translation="MTGWKIFSHSLGMVLRNLGWAVQIALVPVLIAVVCIAALLWTHV GELIASMGRQGYVPSGAFITSILLSVAIFIMAQLWVFVNWHRFVLLEEYPTSWFPTIH GDRMLAYFGTGLLLGLIMALAWIAGGIFSSVGSVLGSPVISLLILFIVMVGVGLLFFR LMPTLPAAAIGNTLSLRESWEATKGTAGTAVVLFIVLVGIQIVLQAVTNLSIYIFAPL GLVFALVSALIMTLVNVSILTTVYGHYVQGRSI" /product="membrane protein, putative" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 2014431..2015657 /locus_tag="Silicibacter_1853" /function="COG: Threonine dehydratase" /gene="ilvA" /transl_table=11 /note="identified by match to putative ortholog SPO0020 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="threonine dehydratase" /translation="MTNFRTQAKAAEAAMRDVFPPTPLQRNELLSQRFGAEIYLKRED LSPVRSYKIRGALNAMRKQTSKDLFVCASAGNHAQGMAYMCRQMDKRGVIFMPVTTPQ QKIQKTRMFGGDNVEVHLIGDYFDDTLSAAQAWCAEKGGYFLSPFDDADVIEGQASIA VEIEAQLGKAPDHIVLPVGGGGMSSGVVRYFGEDVHALLVEPEGGACLKAALEAGHPT PLNRVDTFVDGAAVGKIGERPFDILRSVPLPDVLTVSEDRICTTILEMLNVEGIVLEP AGALAVEALGDLRTWIKGKTVVCLTSGGNFDFERLPEVKERAQRYSGVKKYFLLRLPQ RPGALKEFLNILGPDDDIARFEYMKKSARNFGSVLIGIETKRPENFAPLFAQLDAAGF TYTDITNDETLAQFVI" /EC_number="4.3.1.19" CDS complement(2015689..2016045) /locus_tag="Silicibacter_1854" /translation="MCLARSCWKKTMIDWPRVRELKEEVGDDGFEEVIELFLEEVEDV INKLKSGDRSQLEQDLHFLKGSALNLGFQEFSDLCFQGERMAATGQADAVDLTRVMSS YTASKTSFLQNVRELA" /product="Hpt domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO0021 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2016186..2017457 /locus_tag="Silicibacter_1855" /function="COG: Serine phosphatase RsbU, regulator of sigma subunit" /translation="MLPEHSIEGEDVPVSGSIRRVLVVDDSRLQRRILVASLKKWGFD VVEAESGEDAMDICRADPPDLILSDWMMPGMNGIEFCRAFRADSHETYSYFILLTSKS EKNEVAEGLDAGADDFLTKPVSSDELRARISAGERILRMQRELFEKNRIVSETLDELQ TVYDAIDKDLIQARKIQESLVPELTRAFGASEVNLLLKPCGHIGGDLVGMFSPGINRL GFYSIDVSGHGITSAMMTARLGGYLSSTYFDQNVGMEKKFNRFYALRPPEEVASVLNA RLIADTGIEEYFTMAYCIADLRTGVIKMVQAGHPHPLLLRADGSMEFIGKGGVPVGLV PDVAYEQEEFVMEKGDRLLLYSDGFTEAHLKDGSMLDTEGLVELVNRCDPRRSGKEFL DDLYWHLTQVMGDDKGLEDDISATLFEFQGP" /product="Phosphoserine phosphatase rsbU" /transl_table=11 /EC_number="3.1.3.3" /note=", Phosphoserine phosphatase rsbU (EC 3.1.3.3) (Sigma factor sigB regulation protein rsbU)., Protein phosphatase 2C-like, Response regulator receiver domain, PhoB: phosphate regulon transcriptional regulatory protein PhoB" /note="High confidence in function and specificity" CDS complement(2017464..2017907) /locus_tag="Silicibacter_1856" /function="COG: NTP pyrophosphohydrolases including oxidative damage repair enzymes" /translation="MIRRFGEVPRRDQTYRLRPGAYALLPRDGQLLLTCQYSPAPDIQ LPGGGIDPGESPLPALHREVYEETGWAIASPRRIGAFRRFVYMPEYDLWAEKLCHIYC ARPVLQRSAPVEAGHRALWMPVNDAVSVLGNAGDRHFAALLARYV" /product="Probable" /transl_table=11 /EC_number="3.6.1.-" /note=", Probable (di)nucleoside polyphosphate hydrolase (EC 3.6.1.-)., NUDIX hydrolase, NUDIX domain" /note="High confidence in function and specificity" CDS 2017984..2018961 /locus_tag="Silicibacter_1857" /function="COG: Disulfide bond chaperones of the HSP33 family" /gene="hslO" /translation="MTLGSKIAWDDTVLPFQLDASDMRGRVARLDGVLDGILKQHNYP QPVEALVAEMALLTALIGQTMSLRWKLSLQVQSKGAVRMIATDYYAPEKEGEPARIRA YASFDADRITDGAPFAQLGDGYFAILIDQGGGTKPYQGITPLAATSLSECAQAYFAQS EQLPTRFSLSFGKSSEPGKPEHWRAGGIMLQHMPKASPFAAEASGTGDVLTASDLVSG EEEENWNRVNILLETVEDLELIGPSVSPSELLLRLFHEERPRVYDAQSVRFGCTCSEE RVRQSLSIYSAKDIGTMTTEDGRVTADCQFCGAHYDLDPATVGFDAAGD" /product="chaperonin, 33 kDa" /transl_table=11 /note="identified by match to putative ortholog SPO0024 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2018967..2019566 /locus_tag="Silicibacter_1858" /function="COG: NTP pyrophosphohydrolases including oxidative damage repair enzymes" /translation="MSALAETIAKALTRARTETSDFDLNPETVLPAGRKLRPAGVLVG IETYGAVPQVVLTKRSSVLKHHPGQIAFPGGKVDPTDNDATAAALREAWEEIALPREL PRILGHLPCHETVTGFQVTPVVAVIDQPFEARAEAGEVAEVFRVPLSHVLDIERYQIQ SRRWRGTKRFYFAVPFGPYYIWGATARMLRGFAAIMDTR" /product="hydrolase, NUDIX family" /transl_table=11 /note="identified by match to putative ortholog SPO0025 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2019563..2020723 /locus_tag="Silicibacter_1859" /function="COG: tRNA nucleotidyltransferase/poly(A) polymerase" /translation="MKIDEPWLHSPATRKLCDALTSAGAEIYFVGGCVRNALLGEPVS DLDLSTSATPQYVTEAAEQAGLKVIPTGIEHGTVTVVVDGDPFEITTFRRDVATDGRR AVVAFATEILEDARRRDFTMNALYARPTGEIVDPLSGFEDLRARRVRFIGDATRRIQE DYLRILRYFRFHSWYGDAEAGFDPEALAAIAATQEGLDHLSRERVGAEIMKLLSSSNP APSVATMRQIGVLAHVLPGADDRALAPLIHLEADLPAEAETRLAALGGEDLQNTLRLS KASAARVTLLRTLATGTATAAEIAYRQGVDTAKRAMMLRSALFEMPVLPDLESDIALG AVAEFPISAKDLMPHVQGAALGRALRTLEAEWIRSGFQSDRETLLKRLPDLN" /product="polyA polymerase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0026 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2020951..2022789 /locus_tag="Silicibacter_1860" /function="COG: ABC-type multidrug transport system, ATPase and permease components" /translation="MFRFFENLINPYCDYPETDVPPTRLWPFMREYARPFRSVFWMAG LMSIVVAAIEVGLISYMGRVVDILAGPPEEVWATHGTELIGMALFILLVRPVLQLVDV LLLNNTILPNFGTLIRWRAHKHVLRQSVGWFENDFAGRIANRIMQTPPAAGEVVFQVF DAITFALAYLIGAAVLLWGADPRLLMPLIIWFVLYAALIRWTIKRVGPASQAASDARS TVTGRVVDSYSNIHSVKMFAHHSRELDYAKDAIENTRRTFQAEMRIFTIMDGVLVLLN GLLIVGVVGWGIALWMQGLASVGVVAAATALTLRLNAMTGWIMWALTSFFRQLGVVAE GMETIAQPIELVDTEDAKPLHLSKGEITFDALSHHYGRGAGGLDRLNLTIHPGEKVGL VGRSGAGKSTLVMLLLRFYDPEEGRILIDGQDISQVLQDSLRQHIGMVQQDSSLLHRS VCDNLLYGRPDASEEEMIAAAQKAHAHDFILDLEDPQGRKGYDAHVGERGVKLSGGQR QRVTLARVILKDAPILLLDEATSALDSEVEAAIQETLYGMMEGKTVIAIAHRLSTIAQ MDRILVLNEGKIVEQGTHEALLSEGGLYAQFWARQSGGFLNIEAAE" /product="ABC transporter, transmembrane ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0027 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2022786..2024630 /locus_tag="Silicibacter_1861" /function="COG: ABC-type multidrug transport system, ATPase and permease components" /translation="MKLGNLIDAFQPADGPPPQTLGAFLRWCLSGAWPMLVIAAICSA LAGGMEAGTAFILGKVIDTAIASGPEGFFGANIGVIFAALAFFLLLRPLLFGLSAATN AIILQPNVNPLVLSRLNRWTLGQSVRFFDDDFAGRIAQKQMQTASAVTSVVTEVINVV AFALASLVGAMVLLGSVDLRITLLFVVWLVAYFALIRWFLPRIRKKSAHRAGARANVS GQVVDTITNIKTVQLFAHSAHEERSAQDAMVTFRDRALEFGYLSAAFRFCLMTLAGVL PVLLIGAALWLWQNGSASEGDIVAAGAVSIRIAQMTGWVSFTLMAIYSNVGEVENGMK TLTRPDRIEDRQDAEGLRVTSGQIVIEDLGFRYGRDIGGISDLSLAIQPGEKLGIVGA SGAGKSTLVSLLLRLYEAEKGHILIDGADISRVSQDSLRSQIGMVTQETAMFNRSALD NILYGRPDASRDDVIAAAKAAEADAFIADLEDAQGRTGYDAFLGERGVKLSGGQRQRI ALARAILKDAPILVLDEATSALDSEVEASIQSALTRVMDGKTVLAIAHRLSTLTEMDR IVVMDQGRIIEQGSHEQLLERNGLYAQFWNRQSGGFIRTQDAPSAAAQ" /product="ABC transporter, transmembrane ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0028 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2024824..2025933 /locus_tag="Silicibacter_1862" /function="COG: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase" /gene="rumA" /transl_table=11 /note=", [EC:2.1.1.-], Hypothetical RNA methyltransferase BH0687 (EC 2.1.1.-)., rumA: 23S rRNA (uracil-5-)-methyltransferase RumA" /note="High confidence in function and specificity" /product="RNA methyltransferase" /translation="MTDIRIEDPSEHRVQAPCRHYKSCGGCQLQHVSDEFVAQWKVEI VRNALLSRKLETDFRPIQTSPTHSRRRATLTVKRTKKGAMAGFHGRASDVITAIPDCH LLAPELIAALPMAEDLALIGASRKAPLSVTITTSQAGLDVLVKNGKPLDGPLRIQLAQ AVDRHSLARLTWDDELLAMEQSPTQAFGGANVCPPPGAFLQATPEGESALVAAVREGV GDARRIVDLFAGAGTFSLPLAQTAEVHAVEGEREMMQALELGWRKAQGLKKVTTETRD LFRNPLLVEDLRQFGKVYDAVVIDPPRAGAEAQIAQLAKAKLPLISYVSCNPVTFARD AEVLVAAGYKLNWVQVVDQFRWSSHTELAASFSLT" /EC_number="2.1.1.-" CDS 2025961..2026746 /locus_tag="Silicibacter_1863" /function="COG: Kef-type K+ transport systems, predicted NAD-binding component" /translation="MIDRLKSVLDSDGFSRFITAVILVNAVTLGMETSDTIMQRMGQL VLLIDKVCLIIFVTEIAAKLLVRRHRFFLSGWNIFDFLIVGVALVPGAQGFSVLRALR ILRVLRVISVAPRLRRVVEGFITALPGMGSVFLLMAIIFYIGAVMATKLFGDSFPDWF GSLALSAYSLFQIMTLESWSMGIVRPVMDIYPYAWAFFVPFIMVTTFAVVNLLVGLIV NSMQDAHSEEEGERTDAYRDQVLSRLEAIEASLARLQDDKTQK" /product="voltage-gated sodium channel" /transl_table=11 /note="identified by match to putative ortholog SPO0030 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2026848..2027336 /locus_tag="Silicibacter_1864" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MLATLGAAGCSSGPQIRRYNGPPVTSIVVNKGSRKMYLLNESKV LTEYKVGLGFAPVGHKQVEGDGRTPEGTYLIDRRNPRSQFYLSLGISYPNSADRAHAR SLGASPGGDIFIHGEPNDRADRRRAARVRDWTAGCIAVTNDEIEEIWSMVNNGTLITL RA" /product="ErfK/YbiS/YcfS/YnhG family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0031 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2027443..2027973) /locus_tag="Silicibacter_1865" /function="COG: Uncharacterized protein with SCP/PR1 domains" /translation="MGRSHRTLLGFRMTRVFLILATLTSFVLAACTTGNDGSATGSGV YKIRNEERTQFRMLDSVNALREAAGNPPVQLDSKLNAAAATHSRDMSVQNRPWHFGSD GSSPLDRVARVGYEGTLLGENISETYENEVQTLTAWMEDGGTRAVIMDPNARNMGFSW FQEQNGKIWWTLLMAQ" /product="lipoprotein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0076 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2028106..2028723 /locus_tag="Silicibacter_1866" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MTRKIPFLTSRRQFLAGSASLLASPALGQSLPDVEEPAFDPLRP PPEPEPNVKRNISSFRAKSWKPYFDNLRRGAILVDIDSRALHFWSEDQSVYKLFPSSV PLSDDLTRRGRTRVVRKVEGPSWAPTPNMRKRNPEWPAYIPPGPDNPLGSHALYLSWQ YYRIHGTHDTRKIGRKSSNGCIGLYNEHIAELYKLTRSGTQVLLI" /product="ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO0075 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2028866..2029048 /locus_tag="Silicibacter_1867" /translation="MKKLVIAAALVAAASAASAGNLAEPIVEAPVIIEEATGSSSGML LPLLLLVIVAAAAASN" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(2029136..2030200) /locus_tag="Silicibacter_1868" /function="COG: Protoheme ferro-lyase (ferrochelatase)" /gene="hemH" /transl_table=11 /note="identified by match to putative ortholog SPO0073 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ferrochelatase" /translation="MLDATSTATRPDNAPADHPPVKAEKVGILLANLGTPDHYSYWPM RRYLNEFLSDKRVIDYPSWKWQPLLQLIILTKRPFASGEAYKSIWNHERGESPLMTIT KDQTNAMAKAMEELYGDQVMVDFCMRYGNPSTKSKVEKMIAAGCRKILFVPLYPHYAG ATSATANDQFFRVLMEQPWQPAVRTIEPYFDQPEYIDALARSVEDAYAKLDKTPDILV CSYHGMPKRYLMQGDPYHCQCQKTTRLLRERLGWDESKIMTTFQSVFGPEEWLRPYTV EHVAELAKQGKKNIAVIAPAFSADCIETLEEINEEIFESFEHAGGEEFTYIPCLNDSE AHIAALSSVIRNNLKGWLEA" /EC_number="4.99.1.1" CDS complement(2030302..2031141) /locus_tag="Silicibacter_1869" /function="COG: SAM-dependent methyltransferases" /translation="MTKEPMAHPQIFDRDALRLRRARRKPEAMFLHDMARDEIEDRLS MVKRVFTKPAIIAPFAEPWKDLLPGAKIVEDHDVLDLEPQAHDLVIHVMALHCANDPV GQLIQCRRALQEDGLLLVVTLGGQTLHELRSALAEAETYVSGGLSPRVAPMGEIRDLG ALLQRAGFALPVADLVPLTVHYRDLTHLMHDLRAMGETNTMSDRLRTPTRRSLFHLAD HIYAQNFAADDGKRMATFELVCLTGWSPADSQPQPLRPGSAKTRLADALKVPEVKLPD SER" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0072 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2031153..2031884 /locus_tag="Silicibacter_1870" /function="COG: Predicted amidophosphoribosyltransferases" /translation="MTLRARIQTAVSLVYPARCLNCGGLVESDFGLCGACWRDTTFIS GLVCEGCGAPLPGEDDGQMVHCDACLRAPGEWDRGRAALVYTGQGRRLVLALKHGDRT DLVRPASAWMARAARVLLSPKPLLVPVPLHWTRLLHRRYNQSALLAQAIAAREECDCC PDALIRVAKTPMLEGYSRSERRALLSDAIRPNPRMASRLKGRRVLLVDDVMTSGSTLS ACARACMDAGAKSTNVAVLARVTGS" /product="competence protein F, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0071 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2032101..2033051 /locus_tag="Silicibacter_1871" /function="COG: Predicted amidohydrolase" /translation="MAVARCRRSLLATFTWAVVTSFTLWTGQGSSTRCWRPDPMVRIA LLQMTSSDLPEENLAAAREMIARTAAAGAQFVLTPEVTNCLSTSRTQQQAVLHPEEND PTLAGLRDAARQHGVWLSIGSLGVKTTDADGRFANRQFLISPDGEIKARYDKIHMFDV EVTPEETYRESDGYRPGTRAVLADAGFAKIGMTICYDVRFPALHRRLAQAGAEIITAP AAFSHVTGAAHWHSLLRARAIETGCFVLAAAQTGVHDTSRGAARQTYGHSLAVAPWGE ILADAGTETGITCVDLDLEAVKKARKRVPSLTHDREFDGP" /product="hydrolase, carbon-nitrogen family" /transl_table=11 /note="identified by match to putative ortholog SPO0069 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2033051..2033491 /locus_tag="Silicibacter_1872" /function="COG: Transcriptional regulators" /translation="MDEKHSLAISLFSEILMADQLARARLSKALPKGMELSHFSVLNH LTRAGLERSPAQLAKTFHVTRGAMTNTIYKLEVAGFVHVRPDWDDARRKMVAISPAGR KARDAALASIIPMISEVVSELGGDRVRAALPILREFRGKLEVGE" /product="transcriptional regulator, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0068 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2033798..2034541) /locus_tag="Silicibacter_1873" /function="COG: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase" /gene="ubiG" /transl_table=11 /note="identified by match to putative ortholog SPO0067 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="3-demethylubiquinone-9 3-methyltransferase" /translation="MQAQQSTVDPSEIAKFEAMAAEWWDPNGKFKPLHMLNPCRLDYI TSQIAGEFDRDLKTDAPFAGLRILDIGCGGGLLSEPMARLGAEVVGADAAEGNLPVAR IHAEQSGLEIDYRHTTAEAMAEAGEQFDVVLNMEVVEHVADPLSYLTATQQLLKSGGL QICSTINRNPKSYAMAIFGAEVVMRWLPRGTHEWSKFITPDELFALLEQAGLNPVDRK GFVFNPILWKWSISDRDLSVNYVTASTKS" /EC_number="2.1.1.64" CDS 2034593..2035573 /locus_tag="Silicibacter_1874" /function="COG: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /gene="pip" /transl_table=11 /note="identified by match to putative ortholog SPO0066 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="proline iminopeptidase" /translation="MDKYPDQKRAVQFLYPPIEPFDQRMLDVGQGHRIYMEQCGNPDG VPVIVCHGGPGGGTSPAMRRYFDPKVYRIILFDQRGCGRSRPYASCEDNTTWHLVADM ELIRELLEIDSWMLFGGSWGATLALIYAQTHPERTTQLILRGVFLMTEAELDWFYGGG AGKFWPETWAKFTDLVPKDERDDLIAAYHKRLFSGDRDEEIRFGRAWSAWENALASVY SNGLSGESPGDYARAFARLENHYFSNGGFLHMDGQILANMGRIAHIPGVIVQGRYDMI CPPQAAYSIHQAWPNSDLIMVRNAGHALSEPGISAALVRCMDQLAEEMTQ" /EC_number="3.4.11.5" CDS 2035570..2036421 /locus_tag="Silicibacter_1875" /function="COG: ABC-type dipeptide transport system, periplasmic component" /translation="MKRLDRRALFASGAAAALLAATGAGLAQTPRRGGTLRIAIPRED AFLARLARAAVYDQLTEVAPDGVLRAELASAWRSDETARHWKLNLRTDIPFHDGRMMT GADVIASLEAHLKSGALRLEGVKNLDLSSDGAVVIDLAESNPHLPYRLADTGLVIAPD GAVDAVLGDLNGTGLYQVDRAQEDRHFRARRVAQNYRDEVAGWLDALDLIVIPDAQVR AEALRDGFVDVAALPTAEGLQGRFQFYPSDQEIALAAAEHVALPSRISSRAPLDDHRI AERWWMV" /product="peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0065 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2036658..2037269 /locus_tag="Silicibacter_1876" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MTNDLIAKAAIDRRLAEIITPVIEDLGYELVRIRLMSGKTTTLQ IMADRPDGGIEVDDCAAISNAVSATLDVEDPILDAYTLEVSSPGIDRPLTRLKDFDMF EGYEAKLETADLIDGRRRFKGELAGIEDDEVLINIEEHGETVTIGLKFDWLSDAKLVL TDDLIKEMLRQRKAAGVLNEDAFDDIETEGSAEGTTGSEEENK" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0064 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2037269..2038885 /locus_tag="Silicibacter_1877" /function="COG: Transcription elongation factor" /gene="nusA" /translation="MAITSANQLELLQTAEAVAREKMIDPGLVVEAMEESLARAAKSR YGSEMDIRVSIDRKTGKATFTRVRTVVEDEELENYQSELTVAQAKQYMEDPKVGDTIV DEVPPVEMGRIAAQSAKQVILQKVREAERDRQYEEFKDRNGTIINGVVKREEYGNVIV DIGSGEGILRRNEKIGRESYRPNDRIRCFIKDVRREPRGPQIFLSRTAPEFMAELFKM EVPEIYDGIIEIKAVARDPGSRAKIAVVSYDGSIDPVGACVGMRGSRVQAVVNELQGE KIDIIPWNEDQPTFLVNALQPAEVSKVVLDEEAGKIEVVVPDEQLSLAIGRRGQNVRL ASQLTNLDIDIMTEEEESARRQKEFEARTALFMETLDLDEFFAQLLVSEGFTNLEEVA YVELDELLVIDGVDEGTAEELQARARDYLEAKAKAALDNARSMGVEDSLIDFDGLTPQ MVEALAKDDVKSLEDFATCADWELAGGWTTVNGERVKDEGILEPFDVSLEEAQNLVMT ARIMLGWVDPAELESDADDLEEEAEGEAEA" /product="transcription termination factor NusA" /transl_table=11 /note="identified by match to putative ortholog SPO0063 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2038915..2039532 /locus_tag="Silicibacter_1878" /function="COG: Predicted nucleic-acid-binding protein implicated in transcription termination" /translation="MTRGGAEKSRNDGPERKCLATGETQPKAGLVRFVLGPDNQVYPD VMGKLPGRGVYISATRSALEQAVKKKLFARGFKAQVAVRDDLADEVERQVLRRTVDLI RLARKSGDAVGGYEKVKDWLDKEEARVLIQASDGSGRGKSKLSTPHRGKYIGCMTADE LGMAFGRETVIHAALASGGLSQRVVEEAQRLQGLREMGGIGRTEG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0062 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2039541..2042048 /locus_tag="Silicibacter_1879" /function="COG: Translation initiation factor 2 (IF-2; GTPase)" /gene="infB" /translation="MSDSDGKKTLGLRGSGSRPGNVKQSFSHGRTKNVVVETKRKRVV VPKPGAGKGGAGGVAAGDASRRPAGISDAEMDRRLKALQAAKAREAEEAAQREAEEKA RAEERERRRAEQEAKEREQREAEEKARQKAEEEERKRQEEAEAAKKRAAADKAAAAAP KSDAGVAPARPAPGGAPKPAAGPRKAEREREERGRGAKGRNDGGRRSGKLTLSQATGG EGGRQRSVASMKRKQERARQKAMGQVEREKIIRDVQLPEAIVVSELANRMAERVADVV KALMNMGMMVTQNQTIDADTAELIIEEFGHNVVRVSDADVEDVIKEIEDKEEDLQPRP PVITIMGHVDHGKTSLLDAIRDAKVVAGEAGGITQHIGAYQVTTDSGAVLSFLDTPGH AAFTSMRSRGAQVTDIVVLVVAADDSVMPQTVEAINHAKAAGVPMIVAINKIDKPAAD PNKVRAELLQHEVIVEAMSGEVQDVEVSAHTGQGLDELLEAIALQAEILELKANPNRA AQGAVIEAQLDVGRGPVATVLVQTGTLRQGDIFVVGEQYGKVRALINDKGERVKEAGP SVPVEVLGLNGTPEAGDVLNVTETEAQAREIAEYREQAAKDKRAAAGAATTLEQLMQK AKEDENVSELPILVKADVQGSAEAIVQAMEKIGNDEVRVRVLHSGVGAITETDIGLAE ASGAPVMGFNVRANASARNTANQKGVEIRYYSVIYDLVDDVKAAASGLLSAEIKENFI GYAEIKDVFKVSNVGKVAGCLVTEGVARRSAGVRLLRDNVVIHEGTLKTLKRFKDEVA EVQSGQECGMAFENYDDIRPKDVIEIFEREEVTRTLD" /product="translation initiation factor IF-2" /transl_table=11 /note="identified by match to putative ortholog SPO0061 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2042153..2042347) /locus_tag="Silicibacter_1880" /translation="MPEHHVHRFPRGTYQQLHCQGRQCTRSRLNGYGSFITGTINFGP ETRLAASSSVFLSSGQCHQP" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(2042578..2043042) /locus_tag="Silicibacter_1881" /function="COG: ADP-ribose pyrophosphatase" /gene="mutT" /transl_table=11 /note="identified by match to putative ortholog SPO0060 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="mutator mutT protein" /translation="MDLRSDPSVHHHQRGLSLMSTDKKVVLVSAVALIDVEGRILLAQ RPEGKSMAGLWEFPGGKVEAGETPEVALIRELQEELGINTWSSCLAPLTFASHSYEKF HLLMPLFACRKWEGIPQAREGQVLKWVRPQELRDYPMPPADIPLITILRDWL" /EC_number="3.6.1.-" CDS complement(2042985..2044211) /locus_tag="Silicibacter_1882" /function="COG: N-acetylglutamate synthase (N-acetylornithine aminotransferase)" /gene="argJ" /transl_table=11 /note="identified by match to putative ortholog SPO0059 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="glutamate N-acetyltransferase/amino-acid acetyltransferase" /translation="MAKSLPRSPLAPAAFPDLPEIGGLRFAATAAGVRYQGRTDVMLA VMDPGTSVAGVFTRSATRSAPVLDCQAKLGSNPEHGTAILVNSGNSNAFTGHYGQTSV AEITSAVAATTGLPQDRVFTASTGVIGEPLPHERILTKLDELNGALSGSAIKDAAEAI MTTDTFPKGAATTITIDGKPVQIAGIAKGSGMIAPDMATMLVYIFTDAAYDQDKLQAL LSAQNETSFNCITVDSDTSTSDSLMLCATGASGVDATDNEAFGEALREVMLDLAHQVV RDGEGATKFVEIQITGAANDAEAKVHGLAIANSPLVKTAIAGEDPNWGRVVMAIGKSG AQADRDRLSISFGDVLVAEKGWVAPSYKEDLGAAEMKKDEITLKVDLGIGTGVATVWT CDLTHQYITINADYRS" /EC_number="2.3.1.35" CDS complement(2044244..2045272) /locus_tag="Silicibacter_1883" /function="COG: Parvulin-like peptidyl-prolyl isomerase" /gene="ppiD" /transl_table=11 /note=", [EC:5.2.1.8], PpiC-type peptidyl-prolyl cis-trans isomerase, PPIC-type PPIASE domain" /note="High confidence in function and specificity" /product="peptidyl-prolyl cis-trans isomerase" /translation="MRSKSPVHGLVQRQACPPCSQPINKGGKTVLPQALWRCKGQENE CQRHDPPWQEYRKVSMRKGLTFLQGVVFATAFGLAAPAFAELNANTVVATVNGEDITV GNMIVARAKLPAQYQSLPDDLLFKALLDQLIQQTVLKQQLHGDIPEYVRLSVEHEQRS LLASDVIEAVMEGAQTEDAIRDAYDARYSSDDGGDEFNASHILLESEEAALEIKSQLD EGADFAALAKESSTGPSGPNGGALGWFENGRMVPEFEAAISDMRSGEVSGPVQTQFGW HIIKLNDRRKLEAPEYEDVRDEIAQELAQQAVEDRISQLTATATINRPEIENLEPSVL RDMSLIEN" /EC_number="5.2.1.8" CDS 2045273..2047960 /locus_tag="Silicibacter_1884" /function="COG: Preprotein translocase subunit SecA (ATPase, RNA helicase)" /gene="secA" /translation="MLGIGTLAKKVFGTPNDRKIKATRPLIAKINALEPEFEALSDQG IKDKTEDLRKRALAGESLDDLLPEAFANVREAARRALGLRAFDTQLMGGTFLHQGNIS EMKTGEGKTLVATFPAYLNALTGKGVHVVTVNEYLAKRDSEWMSKVFGALGMTTGVIY SNQPEAEKMAAYQCDVTYATNNELGFDYLRDNMKPSLDQVFQKQHNFAIVDEVDSILI DEARTPLIISGPAEDRSELYETIDKLIPTLDEGHYEIDEKTRGVTFTDEGNEFLEESL LKAGLLEEGASLYDPESTTIVHHVNQALRAHKLFQRDKDYIVRDGNVVLIDEFTGRMM PGRRLSEGLHQAIEAKEGTDIQPENTTLASVTFQNYFRLYDKLSGMTGTAMTEAEEFA EIYGLGVVEVPTNRPIARIDEDDKVYRTANEKYAAMIAETKLAHEKGQPVLLGTTSIE KSELLSQLLQQEGIEHNVLNARHHEQEAKIVAEAGRLGAVTIATNMAGRGTDIQLGGN IDLKVMEALEANPDADPAVLRAEEEAKHAEEKQKVLEAGGLYVMASERHESRRIDNQL RGRSGRQGDPGRTSFYLSLEDDLMRIFGSERLDKLLSGLGMKEGEAIIHPWVNKSLER AQAKVEGRNFDMRKNVLKFDDVMNDQRKVVFAQRREIMASDDTHEIVTDMRHEVIDDL IDIYMPPKTYADQWDTQGLQDDVREKLNIDAPVVEWAAEEGVDDEQIRERLVEASDKL MAEKVEAFGQEGMSNIEKQVLLQTIDAKWREHLLTLEHLRSVVGFRGYAQRDPLNEYK NESFQLFESMLDSLRETVTQQLSRVRPLSEEEQREMMMQMAARQGMQRAAAPAAEPVE APKEGFVEDDPSTWGNPSRNDKCPCGSGKKFKHCHGRLG" /product="preprotein translocase, SecA subunit" /transl_table=11 /note="identified by match to putative ortholog SPO0057 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2048096..2048992 /locus_tag="Silicibacter_1885" /translation="MGIRVTGLIAVATVICALGTGVYMQRTADLQRAPSAQQASAPLP TEPETGKLVLQDVTFTSARPDTHRRRQPLRDVDTSLLQCASTLNLTAIDNAMLQVELS APCRAGERFTLHHGGVMVTYALDAEGDFRGVLPAFTKRAVVIADFASGRDLDASVMVE DLEQVERVVMHWQGRSGLELHALEFGATYGSAGHVWKGSEPGLGAGEVLFLGDPDQVA AHLVQVYTLPKSSGYGAVNISVEAEITDANCDQAVAAQLIERRDDRLRTRDLVLNIPD CSAVGDFLVLNNLVESLKIASN" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 2049016..2050569 /locus_tag="Silicibacter_1886" /function="COG: ABC-type phosphate transport system, periplasmic component" /translation="MSYYRAAVCAALCFFSFGQPVLGQDVTLSSPDGAIEVSGDLLGF DGEFYRVETQFGELTVDGSGVRCEGPGCPSLSDFVAEITFAGSSTMAEVLLPALIEGF SLRNGYQTARMQLDSRQFEYTLSRDGRVAGRFTFQVSNTDEGFADVLANQADIVMALR EIREAEHLLASEAGLGDMSLSNRGRVLALDAMVPVVAPSNPVRRISLPQLADIYAGKI TNWSELGGADAPISVHLPVAGAGLAQAVEDKLLSPAGLELSESIRRHDRGSTLVRTVA TDPFAIGIASYAETGQTRMLTLTGACGFSLSAGRRSIKTEDYPLTAPMFLYLPAHRLP RIARDFLTYVRGPAAQIVIRRAGFVDQAPEHIPLRLQGERLSNAIRSAGEDIPLSELQ RLISGLDGLQRLTTSFRFEAGSSRPDAQSRNNIDLLARELEAGVYDGKRLVFVGFSDG EGPAEGNRAIAMKRAESVRRAVERAAETANLDRISIETAAYGEALPIACDDSAWGRQA NRRVEVWIR" /product="OmpA domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO0055 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2050728..2052665) /locus_tag="Silicibacter_1887" /function="COG: Deoxyxylulose-5-phosphate synthase" /gene="dxs" /transl_table=11 /note="identified by match to putative ortholog SPO0247 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="1-deoxy-D-xylulose-5-phosphate synthase" /translation="MTDRPQTPLLDQIASPADLKRLSDAQLEQVAHELRQETISAVSV TGGHLGAGLGVVELTVALHSVFDTPKDKVIWDVSHQCYPHKILTGRRDRIRTLRMKDG LSGFTKRSESAFDPFGAAHSSTSISAALGFSVARDLGGVTEEGLGDAIAVIGDGAMSA GMAFEAMNNAGHLGKRLIVILNDNEMSIAPPVGALSSYLSRLYTEAPFHDLKAAAKGA VSLLPEPFREGAKRAKDMLKGMAMGGTLFESLGFSYIGPIDGHDMDQLLPVLRTVKAR AAGPILIHAVTKKGKGYRPAEVARDKGHATAKFDMVTGEQKKAPSNAPSYTSVFGKTL TDLAAQDSKICAVTAAMPDGTGLNLMAERYPSRTFDVGIAEQHGVTFAAALAAGGMKP FCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAFMANLPG MVVMAAADEAELKHMVATAAAYDAGPIAFRYPRGEGEGVEMPEQPEVLEIGKGRIIEE GSRVALLSFGTRLGEVRKAAEALAARGITPTVADARFAKPLDRDMILSLAEKHEALIT IEEGAVGGFGSHVAQLLSEEAVFDTGLKFRSMVLPDTFIDQASPKDMYDSAAMNAEHI EAKVLDVLGVARLDERRLPAS" /EC_number="2.2.1.7" CDS complement(2052696..2053559) /locus_tag="Silicibacter_1888" /function="COG: Geranylgeranyl pyrophosphate synthase" /gene="ispA" /transl_table=11 /note="identified by match to putative ortholog SPO0248 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="farnesyl diphosphate synthase" /translation="MTAGFTAALLQAQTQILNHMDRRLPQADLLHQAMDYALRGGKML RGFLVLESARLHDVPETAAIEAALAIECIHAYSLVHDDLPAMDDDDLRRGQPTLHRKW DEATAVLAGDSLQTLAFELLARDSVGPNALSLIRTLAQAAGKDGMVSGQMMDIAAETA ETPLTLDEITTLQARKTGCLIEWSACAGARLAGADPAPLRHYAQALGLAFQIADDILD VEGDAATVGKAVRKDADAGKATFVSHLGLEGAKHRARELADLACAALAPYGAAGDTLK DAARFVISRDS" /EC_number="2.5.1.10" CDS complement(2053566..2053811) /locus_tag="Silicibacter_1889" /function="COG: Exonuclease VII small subunit" /gene="xseB" /transl_table=11 /note="identified by match to putative ortholog SPO0249 from Silicibacter pomeroyi DSS-3" /note="Specificity unclear" /product="exodeoxyribonuclease VII, small subunit" /translation="MTTETPVEEMSFETAMQELERVVDQLERGDVALDASISLYERGA ALKKRCEDELKRAEEKVAAITLDANGQPTGTQPLDAG" /EC_number="3.1.11.6" CDS complement(2053808..2054734) /locus_tag="Silicibacter_1890" /function="COG: Deacetylases, including yeast histone deacetylase and acetoin utilization protein" /translation="MATALLTHADCLTHETPPGHPEQVARLEHVLHALAGLDLVRVTA PLAAEDDILRAHPATYLADLRRALPTEGRRALDADTWMSAGSLDAAFRAVGAAVRAVD MVLAGDVQNAFCATRPPGHHAETDTPMGFCLFGTAALAAKHALDHHGLKRVAVVDFDV HHGNGTQDLLWDERRALVISSHQMPLWPGSGNSDDDGAYDNVMNLPLRPETGGDEMRQ IYQTQAFARLRAFKPELIILSAGFDAHREDPLAQLNWKTDDFRWLTSELCLLAQELCQ GRIVSTLEGGYDLNALADAAKAHVEELIKAAT" /product="histone deacetylase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0250 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2054854..2055558) /locus_tag="Silicibacter_1891" /function="COG: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain" /gene="petR" /translation="MSANNDPHLLIVDDDERIRDLLKKFLIRAGFLVTAARDAAHARR VLSGLDFDLIVLDVMMPGEDGLSLTAALRETMATPILLLTARGETDDRIKGLEAGADD YLPKPFEPKELLLRINAILRRMPESQPEDIAPKFLQLGEIRYDIDRGEMWQGEDLIRL TSTEIQLMKIFSAQPGEAVSRAKLVEDLGRDRGQAQERAVDVQITRLRRKIEPNPKQP QYLQTVRGAGYMLAPD" /product="DNA-binding response regulator PetR" /transl_table=11 /note="identified by match to putative ortholog SPO0251 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2055555..2056067) /locus_tag="Silicibacter_1892" /function="COG: Transcriptional regulators" /gene="petP" /translation="MSDGRSGTGFGGESLLFLTDEQLRQGIEAMFFAYQGFTADPDRI LADLAYGRAHHRALHFINRSPGTTVNNLLSILGVTKQSLNRVLRALVEDGLVDSRVGT LDKRERNLYLTERGVDLEQRLSDAQRVRMRAAYKQAGPEAVQGFKKVLEAMMDADMRR AYTELREKSQ" /product="transcriptional regulator PetP" /transl_table=11 /note="identified by match to putative ortholog SPO0252 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2056228..2057094 /locus_tag="Silicibacter_1893" /function="COG: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase" /gene="ilvE" /transl_table=11 /note="identified by match to putative ortholog SPO0253 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="branched-chain amino acid aminotransferase" /translation="MAGYDDRDGLIWMDGELVNWRDAKVHILTHAMHYASSVFEGERA YNGKIFKSRAHSERLIASAEALDMPMPYSVDDIERAKEETLKASGLQDAYVRAVVWRG SGEDMGVASAKNPVRMAVAVWGWGAYYGDAKMQGAKLDIAEFKRPSPETIPVHAKAAG LYMICTISKHKAEAKGCSDALFMDYRGYVAEATGANIFFVKDGEVHTPKPDCFLNGIT RQTVIQMLKDKGITVHERHIMPEEMDGFEQCWLTGTAAEVTPVGEIGPYKFEVGQLTR EIAEEYEALVRS" /EC_number="2.6.1.42" CDS complement(2057263..2057691) /locus_tag="Silicibacter_1894" /function="COG: Predicted redox protein, regulator of disulfide bond formation" /gene="ohr" /translation="MSVSPVYTAHGSATGGRDGQAKVKGTDLVLDLAPPTEMGGDGKG YNPEQLFAAGYSACYIGAMKFATTQDDSLPKVPDSVEVETAVGIGPRDEGGFGLKVHL KVTLPGVEKEAAERLTEAGHKICPYSNSVRGNVEVTTEIA" /product="organic hydroperoxide resistance protein" /transl_table=11 /note="identified by match to putative ortholog SPO0254 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2057799..2058230 /locus_tag="Silicibacter_1895" /function="COG: Transcriptional regulators" /translation="MDQPLKIDELLCFSVYSVNHAISRLYRPLLAPLGLTYPQYLVLV ALWDKDQRRVGDLGSELQLETNTLTPLLKRMEMAGFLTRQRDSSDERGLIVALTDKGR EVKEQAGTLTACVLEAMGGDIGELAALRDRLHSLRKTLEQE" /product="transcriptional regulator, MarR family" /transl_table=11 /note="identified by match to putative ortholog SPO0255 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2058249..2059190) /locus_tag="Silicibacter_1896" /function="COG: Permeases of the drug/metabolite transporter (DMT) superfamily" /translation="MAKSLTSHRPILAITLKVTAIGLFTIMSGLIKEITQTVPTGQAV FFRSFFVLPVILVWLAARGDLPSGLRTRSPMLHFWRGVVGTTAMGLNFAALAILPLPE VTALGYATPIFTLVLAALLLGERIRIIRISAVAIGLVGVLIMLSPRLGGAGSFQDMAF IGAMLVLAAAALRGFVQIHIRKMVQSEETAAIVFYFSVTASLLSLLTLPFGWVKPDMP LLLLMISTGFIGAIAQILITSSYRFAPASLLAPYDYVSMLFALLIGYVWFSEWPSLVM LLGAALVIVANGIVIWRESRLGLERGKAKPLTDPKGG" /product="membrane protein" /transl_table=11 /note="identified by match to putative ortholog SPO0263 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2059275..2059925) /locus_tag="Silicibacter_1897" /function="COG: Co/Zn/Cd efflux system component" /translation="MAGCCNHTARFDGVSKEYKRRLWAVIVINAAMFCVEMAAGQAAG SQALKADALDFLGDALTYGISLAVIGASLRTRALAAIGKGVSLLLMGGWVFGSTIWNV FVVGVPEAQVMGVIGFLALAANLLSVALLAAYKDGDANVRSVWLCSRNDAVGNVAVMI AALGVWGTSTGWPDLIVAGIMAGLFLNSALQILRQALAEWRSEENQAEAHDPGPAH" /product="Zinc transporter zitB." /transl_table=11 /note=", Cation efflux protein" /note="Conserved hypothetical protein" CDS 2060010..2060426 /locus_tag="Silicibacter_1898" /function="COG: Predicted transcriptional regulators" /translation="MLSIGALSKATGVKVPTIRYYEEIGLIDHASRNAGNQRRYDQAG LERLGFIKHARDLGFTLEEIRDLMGLNGQLGQDCRAADRIAQSQLEKVRARIARLRRL EAELERITTLCQGGNGGQCQVLSALGDHSLCLGDHD" /product="transcriptional regulator, MerR family" /transl_table=11 /note="identified by match to putative ortholog SPOA0389 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2060436..2061341) /locus_tag="Silicibacter_1899" /function="COG: dTDP-D-glucose 4,6-dehydratase" /translation="MFCHMTQDTTRKTLLCFGFGYTARALAKILPRDAWRIIGTTRDR CEDQSESGVELMTWPGQDVPLRDVTHILLSISPSEDGDPVLNALGAEIAALPSLEWIG YLSTTAVYGDHDGGWVDEMTPATPSSQRGNWRVRAEEEWSSLAGLPLHIFRLAGIYGP GRGPFAKLMAGKARRIVKPGQVFSRAHVEDIAQVLKASIQAPNPGAIYNVCDDEPAPP QDVLGYAAELLGLPIPSEVPFDEAGMSPMARSFYGENKRVRNARIKDELGVKLRYPDY RSGLQAVFSAEDMEKFVPPADPPGV" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3755 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2061737..2062456 /locus_tag="Silicibacter_1900" /function="COG: NADH:ubiquinone oxidoreductase 24 kD subunit" /translation="MHVYLYLISANYVSTKRFAALSRRLEELAPKPAMAIRLEADGVG LWQALDTLRARGARRIDLRPVGLPFSQSLENWLPGAAGAWCAQQNGVPPEVFFASSPE HDDDVIRAVASAEVSLQRVVDRPRGEIGKGWDLPPPHQHHLLVCTGPRCHLKDAPNLA DHLKSEIRRAGLGDSCLVTTTGCVFPCNAGPVIVHYPRGDWYRVPDLSEIQRFVKTVL VQGGRLEHLIFHQTGVSHETA" /product="NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial precursor" /transl_table=11 /EC_number="1.6.99.3" /note=", NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Fragment)." /note="High confidence in function and specificity" CDS 2062443..2063375 /locus_tag="Silicibacter_1901" /function="COG: ABC-type Fe3+-hydroxamate transport system, periplasmic component" /gene="hmuT" /translation="MKLRNLLPLLGLMASAAHADAVTIQSCGVSQVFDKTPSRAITLN QQATEVMLALGLQEAMVGTAYIDDAIPAQWNDAYESVPVLAEKYPAAEVVLAQEPDFL FAGFGSAFSEDNLGAAEKWHDLGIGTYLVDASCKDKHLQDVPLTVAPIFEDIETVGKI FNVEDRANALIDTLQQRLDSVKAAPSGAGQTAFIYDSGAETPFSIGCCGGPALLASLT GLQSISSDVPGTWVDLSWEHVVAADPDVILLIEADWSTAAEKRAHMEADPVLSALRAV KEGRFVTVPFSETLLGMRFADGVETVNNQLAKLP" /product="Vitamin B12 transport protein btuF precursor." /transl_table=11 /note=", Periplasmic binding protein" /note="Conserved hypothetical protein" CDS 2063376..2064383 /locus_tag="Silicibacter_1902" /function="COG: ABC-type Fe3+-siderophore transport system, permease component" /gene="btuC" /translation="MRRGSPLLLPASGLALLLAMAAGVLWGTADISWGDRLAILMHDD DAPRGLSMIVWQWRIPRVLAVGMIGAGLTLAGLLMQTALRNPMADPYLMGVSSGASAA AVGAIIWFPSQMTETLGVPLIAFLGAAAAFLMTLTLSHRRGRALDPLVVILAGVAVSL MFQALTAFFLYVGDPHATRNAMGWLMGTAAGTDWEELPLLGTILALSLVLALRASSKL DATLLGDERAQSLGVNVGRMRLLVFFVTIALTGVAVSIAGIVGFVGLILPHMARLLVG ARHRVLIPQAAILGAITLILVDLACRVVLAPEELPLGVLLALLAAPPFIYILRGMAHA R" /product="Putative ABC transporter permease protein MJ0087." /transl_table=11 /note=", Bacterial transport system permease protein, FecCD transport family" /note="Conserved hypothetical protein" CDS 2064373..2065206 /locus_tag="Silicibacter_1903" /function="COG: ABC-type sugar transport systems, ATPase components" /gene="fecE" /transl_table=11 /note=", Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase)., ABC transporter related, ABC transporter, 3a0106s01: sulfate ABC transporter, ATP-binding protein" /note="High confidence in function and specificity" /product="Sulfate/thiosulfate import ATP-binding protein cysA" /translation="MPDDPILEIQDLSVAVGGLPYVRDLSLCVERGRFHGLLGPNGAG KTTLLRVLYRAIAPQSGEVRLNGRPQSDFSPAQWARHVGALVQGGGLLSGLTPEDIVE IGLTLRERPSAKRKEAVQDALSLVGLQDKARQDAESLSGGELQRCYFAQLLACDPEVY VLDEPTNHLDLHYQLRLLDEVRRRGRSAIVSFHDLGMAARYCDTVHLMQEGQLVAEGP PQAVLTPEVLHQHYRVDGRLDGHSLKLEGPVLDGTDPLRVFEDERSQATLWSSSASSK A" /EC_number="3.6.3.25" CDS complement(2065164..2067338) /locus_tag="Silicibacter_1904" /function="COG: Methyl-accepting chemotaxis protein" /gene="mcp" /translation="MTYSIRTAILSIVGLAAIGMCALVGLSFYTNAARDTSQQEIEQV ETLNATIVQLEIAFLQARRAEKDFLLRSDEKYVGRHADILTQLNATLDSARAQTNEID GMSDVSANLDDLQVAVASYAASFQDVVSSSLALGLNETEGHQGKLRAAVHSVEESLKD SAYPEMMVKMLMMRRHEKDFIMRRNTKYLGRLEQRIEEFHAFPDSYFSSAEQQAEIDA LLETYRSTFAAFVDETMKLTERTGIMSDRYAAAEPILDETRTLIRDRRDMIVTSAKAA QRELMNRSSILAGIGLLTFIALGFALAQKISGPLLKIQRVLQQMFEGKFDAEIPHSRI NEVSAVSTAIENFRDGQIERERFATEINKVISACAEGDFSQRIPIDDEESEFAQLGHG VNSIGTVVESGLADVRFTVDALAGGDLTVRMPDSHRGVFAEIAAAVDALSLTQTEVIR QLIESSVTLNNTANEIAAATLDASKRGESAAASLEETTGAIQILNDSVQDTASNSRQA HEYVRDAQNRVASTLAVAEETTAAINRVREASEAISKITDLIEGVSFQTNLLALNAGV EAARAGEAGAGFAVVASEVRALAQRSAEATQEINELIRNSSNEVRQGVELVSRTGGEL NAIKDSVASLVQMVDQISVANSEQSTSITEVNTAVTQLDESSQKNAAMLEETAASTQM LRDEAAKLVASVSRFKIEATDTPQSANLDQAFDDADDDHKVA" /product="Probable chemoreceptor Y4FA" /transl_table=11 /note="Probable chemoreceptor Y4FA (Methyl-accepting chemotaxis protein)., Bacterial chemotaxis sensory transducer, Methyl-accepting chemotaxis protein (MCP) signaling domain, belas" /note="High confidence in function and specificity" CDS 2067905..2068744 /locus_tag="Silicibacter_1905" /function="COG: Flagellar motor protein" /gene="motB" /translation="MTAQSNQAPIIIKKVKKGGGDGHHGGAWKVAYADFVTAMMAFFL LMWLLNATTEKQRKGLADYFSPSIPLSRVSGGGNGAFQGDTMFTEDVKPQNGVGATKE NPTDASRAQGETGVADDQQSDAAEEASFRQIEEALMGRGGESMVSIDMARHIVTRVTD EGLIIELFETEDATLFEADSERPTVLMRDLLRMVARVTSGVENNVAIGGHVASTPVVI ANNPVWALSHARADQTRELLQAGGMSAKRISRVTGFADRDLASQNPMSERNNRITITL LRK" /product="Chemotaxis motB protein (Motility protein B)." /transl_table=11 /note="OmpA/MotB, belas" /note="Conserved hypothetical protein" CDS 2068875..2070143 /locus_tag="Silicibacter_1906" /function="COG: Flagellar hook protein FlgE" /gene="flgE" /translation="MTISSSLNAGVAGLAANSTRLAAISDNIANSSTAGYKRVVTSFE SMVISQSGGRYAAGGVSVNNTRMIDERSSLISTSNATDLAVAGRGFLPVASLAEVKAG EDPNMLLTTSGSFRTNDEGYLTTSSGLVLLGWPANSDGTLPSVARDTDDPLEPIRFDT AQLSAAPTTAVSLGVNLPASSAVTGAAGAAEENTIQYFDNLGGQQDLNIVYTPTGAAD NEWTMTLTDGVTGTVVGDYTLTFDDSVTGKGTLSTVTTTTGGAYDPATGAIIVTTDSG PIEIEIGVMTQLASSFSAATIEKDGYEAASFAGVEVDEGGYVHALYENGSSRIVYQIP LADMPNANGMRSLDSQTFMPSPDSGAYYLWDAGAGPTGTVASYRQEESGTDVASELTT MIQTQRAYSSNAKVIQTVDEMLQETTNIKR" /product="Flagellar hook protein flgE." /transl_table=11 /note="Protein of unknown function DUF1078, Domain of unknown function (DUF1078), homology to flgE protein, belas" /note="Conserved hypothetical protein" CDS 2070195..2071643 /locus_tag="Silicibacter_1907" /function="COG: Flagellar hook-associated protein" /gene="flgK" /translation="MSLSTALSSAMTGITAASRSTSVISDNLANALSEGYYRRTLDLS SNGAAGGVRIGSVQRMIDPAIQKSVRSAEANYAATSVTAGFYARVSEQVGTVNDAYSI AQRMTDMETALIEATSLPDSDARLNDLSMQAGELAMSIRDAAEGVSSLRNKAEDSIAA LVQGLETNLETLNDLNRKILAAEVRGQDPSGLEDQRDSLIDAINEVIPVQVHKRDNNQ TALYTNSGIKLIDGGSVAEFSFDETRLVTPYMTLGNGQLSGLEIDGKQIDTSINGKIG GGSLAAQFHVRDVASVQAQEDLDTMAADLIQRFQDPAVDPTLGATDPGIFTDQGAFFD PVNTLGVANRIELNSIISMSGSAETWRLRDGLNATAIGERGDTTILNNYAEAMEATNT ITSPGLGSGDYSAYAIAANLMTNFTQENTWAEQELAYSSAIFSDIQSRELEQGVDTDS ELQTLMMVETIYAANARMIQAIDEMMQELMRL" /product="Flagellar hook-associated protein 1 (HAP1)." /transl_table=11 /note="Protein of unknown function DUF1078, flgK_ends: flagellar hook-associated protein FlgK, belas" /note="Conserved hypothetical protein" CDS 2071647..2072654 /locus_tag="Silicibacter_1908" /function="COG: Flagellin and related hook-associated proteins" /gene="flgL" /translation="MHVQSFGDMAQYLFLRRRSVELNSTLDTLTQEMSTGIASNLPER LGGDLGFVVDLERSISKMDSYKVAAQEAGLFASTAQSYLERINESALKLGSDILALSS TSNDTTSQEMAAQSENFLTETISNLNGKFSGRSLFAGTDTSVTPLESPNTMMTALVAE VGALTDVDDIFQAVEDWFNDPAGFDAIMYNGSTSSMSAVRIGANEEVNFALRADDERL KQAMQSFALGALASEDYLSHLSTVEASALVKRAGTELMNAQAELTDVQSDLGFVEARI EETQVRNTAALTTMGTTLNDLILADPAETASRVEEVQFQLEALYSITVRSSQLNLLNY M" /product="flagellar hook-associated protein" /transl_table=11 /note="homology to flgL protein, belas" /note="Hypothetical protein" CDS 2072654..2073757 /locus_tag="Silicibacter_1909" /function="COG: Flagellar basal-body P-ring protein" /gene="flgI" /translation="MRKFLHILITCLVLPTLAQANAIRLKDLVEFDGVRGNDLVGYGL VVGLDGTGDGLRNSPFTEEIMTNILERLGVNVSGEQFRPKNVAAVFVTATLPPFARVG GTIDATVSAIGDSSSLLGGTLIMTPLNAADGQIYAVAQGTILAGGAVAEGDAATVTQG VPTSGVIPSGARVEREIEFDLSSLNSMRLALREPDFTTAGRIERAINNEFGRNVAVMR DSGTVEVNIQRTNARSTAHAVGRMENVLVEPQRKARVVVDQRSGTIVMGSDVRISNVA VAQGNLTLRVEEAPLVSQPNPFADGETVVVPRTGAAIEEEDGIQLAEVPETTSLSEVV SGLNALGVSPRDMIDILKSLKAAGALHAEFVVR" /product="Flagellar P-ring protein precursor" /transl_table=11 /note="Flagellar P-ring protein precursor (Basal body P-ring protein)., Flagellar P-ring protein, Flagellar P-ring protein, homology to flgI protein, belas" /note="High confidence in function and specificity" CDS complement(2074266..2075012) /locus_tag="Silicibacter_1910" /function="COG: Flagellar biosynthesis pathway, component FliP" /gene="fliP" /translation="MTRKFLALGVLAVFALLAQPQVALAQELSLNLADGQSISARTIQ LILLITVLSVAPGLLVMLTCFPFLITVLSILRQAIGLQQAPPNMLMISLAMFLTYFVM EPVFTEAWETGIAPLIDEELEVVPALERAVEPFRVFMANRLDPDTYYAIADLRPGTEG SDPSPESPLSVLIPSFMLSEITRAFEIGFLVFLPFLVIDLVTAAILMSMGMMMVPPAL VSLPFKLAFFVVADGWSLIASALVRSYYPS" /product="Flagellar biosynthetic protein fliP." /transl_table=11 /note="Flagellar transport protein FliP, FliP family, fliP: flagellar biosynthetic protein FliP, belas" /note="Conserved hypothetical protein" CDS complement(2075009..2075305) /locus_tag="Silicibacter_1911" /function="COG: Flagellar motor switch/type III secretory pathway protein" /gene="fliN" /translation="MDETGELNPKAAEASNPFVSVPVEVIVSVGKARPLIRDLVNLGE NAILTLDKKVEDPVDLYVGDRLVARGQLEEMEGDQAGQLAVRLTEIADLQSGLG" /product="Flagellar motor switch protein fliN." /transl_table=11 /note="Surface presentation of antigens (SPOA) protein, fliN: flagellar motor switch protein FliN, belas" /note="Conserved hypothetical protein" CDS complement(2075298..2075894) /locus_tag="Silicibacter_1912" /gene="fliO" /translation="MTIAHLLEDFGVKTPVEPVSSFSEELVEEAKLVSFEKGYTAGWD DAVEAKDKEATHVSATLATSLEDLSFTYHEAQSQLMESLDPMFKVLTSVILPDTMAAT FGHHVIDHLNEMAKGQINEPMEIVAAAGEGNAIRALLGENPAFNVRVREDASFSAGQA QLRVGQSERELNSEALIESIRDSIDAFSYQFKEESQYG" /product="ABC transporter, ATP-binding protein, flagellar, putative" /transl_table=11 /note="homology to fliO, belas" /note="Hypothetical protein" CDS complement(2075894..2077570) /locus_tag="Silicibacter_1913" /function="COG: Flagellar biosynthesis/type III secretory pathway lipoprotein" /gene="fliF" /translation="MQQIKNVWAGLDKRKRMMAIGATLAVIFTFFLMSLVANKPSMQL LYAGLESSSAGDVVSALEQSGVDYEVRGGSIYVPSSKRDELRMTLASQGLPANGGKGY ELLDSLSGFGTTSQMFDAAYWRAKEGELARTIVANPHVSQARVHIANTGSNPFQRTIE PTASVSVTPMGSPITPSQANAIRFLVASAVAGLAVDNVAVIDANGALIGSPEAAAAAG AGTDDRSQTLRERVLRLVEARVGQGNAVVEISVETITDTESIREKRVDPQSRVAISTD VEERIDSSQNQAGEVTVASNIPDGDAGNGEGSKASTNATRERVNYEISETEKEIVRGP GAIKRLTVAVLINGVTTETAEGEAAFEPRPEEELEALRELISAAVGFDAERGDVITLK SMDLPNVEPLGTEVTSSVFDNLYFDVMSIIQMAALAIVALILGLFVVRPILAGNGASV QALPSPDGVAAGGLPELPDMSGGDAGFMTNPDLGANIALDGEIDGGDGGFQPLGDLPG MGDGLAGFGGGGGGMSDDPVDRLRSMIGERQEETVQILRGWLEENNEERA" /product="Flagellar M-ring protein." /transl_table=11 /note="Flagellar FliF M-ring protein, Secretory protein of YscJ/FliF family, fliF: flagellar M-ring protein FliF, belas" /note="Conserved hypothetical protein" CDS 2077690..2078214 /locus_tag="Silicibacter_1914" /gene="fliL" /translation="MTDAVADVETDQPAKKSKMPLIIGLVLGIAGAGGGFYAVQSGLL PFGNTPAPEMAQATKEAPEGVDKGESAEEIANLAFIEMEPIVVTLNRASGVQQLRFRA QLEVNQADQDEVETVLPRVVDVLNSYLRALELEDLTDPMALPKLRAQMLRRINIVTGQ GRVRDLLIMDFVLN" /product="Flagellar fliL protein." /transl_table=11 /note="Flagellar basal body-associated protein FliL, Flagellar basal body-associated protein FliL, homology to fliL, belas" /note="Conserved hypothetical protein" CDS 2078224..2078682 /locus_tag="Silicibacter_1915" /translation="MELIADILLAAGALGAGFYCLVLSRRLKRFNDLEKGVGGAVAVL SSQVDDLNKSLVAARKMSDGSSQALEQLTGRAESVAHKLELMMASMHDIAPQQDAKAK PAATEETDALAEAYQAEAQAEAAEQADAQEEAKPAGLMFVRHSRSQNRVA" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO0201 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2078682..2079299 /locus_tag="Silicibacter_1916" /function="COG: Uncharacterized conserved protein" /translation="MAKANKSQKMEKARRGTLMLLAVFLMGSAVVRIALEAAPAIARE VADIKSDEAPVEKPVAATGLASVPDSAEMQAMLAAFQKREEKLAAREAEVEDRMRALE IADQAIDKKLQDLEEAEQKLLATLALADGAAEQDVTTLTTVYEQMKPKDASALFEEMD PTFAAGFLARMKPEAAAGIMAGLSPEAAYTISVVLAGRNGEVPKE" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0202 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2079374..2080243 /locus_tag="Silicibacter_1917" /function="COG: Flagellar motor component" /gene="motA" /translation="MIGIVGIIVIFAMVFGGYLLAGGKLGIILKSLPFEMMMIGGAAV GAFLISNDMGGVKHTLKDMGKVFKGPKWKPDDYKDLLCLLFALIRIARANPVEVEQHI EDPENSAVFGKYPKILADKEAINLISDTMRSASMNYDDPHQVEEVLEKRIEANLHHAL HSSHALQTMADGLPALGIVAAVLGVIKTMASIDQPPEVLGKMIGGALVGTFLGVFLSY GLVAPFAGKVKSVVEEDAHFYQLIREVLVANLHNHAAAICIEVGRQNTPSHIRPGFSE LEEALNEVKQGAA" /product="Chemotaxis motA protein (Motility protein A)." /transl_table=11 /note="Flagellar motor protein MotA, belas" /note="Conserved hypothetical protein" CDS 2080240..2082654 /locus_tag="Silicibacter_1918" /gene="flaA" /translation="MISRAIAFAAAVVVAGYAEAQTIVTRSGEHDTFTRLVMRLPDGI EWSLTQNENVATVNVGSPTAVFNTQSVFDLIPRTRIRSVSQAAPGQPLRIDLGCECSV DYYQQSDGYLVIDVREGRSLTLAEPSDRASLPLTFPSARAGRDFNIDSRDLASARVAM GLEDAVEQTFGSAKRQPLHTGPVEIPLLGDETGIAPAQKAEDVAVPDTKDDDDKPSPE TLTADSSLLMDLEENRRAALVNDTETRLLQQIGRASDQGLLNPNEQGQAALQLDPLGN ENRPLNPLDNMSVTSAIDRETGLFAVSNGRDEAASHCIPDLEIAVYKWGKETPFAEQI GALRNEILGEFDQLNRDATLKLARTYLYFGFGAEAVSTLHMLSESNLKPRSREIMTTI AQILDGEELPVNTIFSGQQTCSGGAAFWAAMADGVVKKGANSDAIQQTFARLPAHLRV QLGARMTRLFAEAGDPSVAKATLRSVDRTGVEGVPDRNLAEAAIAELDGDTDAVARNL TEEVAEQSQNTPLALIELVELSYAERRALSPDVPDLTASYELEYRDAALGAELRKAEV MALALTGSFDAAFKKSAKLEERDGLMARDSVNTPLMTLLTENADDVTFLKYALIFAHE AGATRAGQVGDIIARRLLDLGFAEQAEMILRKMSLEPQNEDRRMMSAEAHLQLDQPQR ALVELMGLEGQQADRMRAEALWRNKEYERASEYMMSAQDLDGAARGFWLSEDLEAVEA ISEDAAPFRSVAEVTKQIDSAVREPEGLPPLAEARALVESSVGARSSIEELLRKVERT PDEVED" /product="hypothetical protein" /transl_table=11 /note="Mutation in this gene leads to nonmotile cells that lack flagella, gene named by experimental evidence, unique gene to TM1040, belas" /note="High confidence in function and specificity" CDS 2082989..2085079 /locus_tag="Silicibacter_1919" /function="COG: Type III secretory pathway, component EscV" /gene="flhA" /translation="MPNLSVKELFSPTILLAMALMAIIVMMILPMPAWVLDVGLATSF ALAILIFTITLFIERPLDFSSFPTILLGSLMLRLSLNVSSTKLIIGQGHTGTDAAGNV IEGFANFVMGGSVFLGLVVFGVLLIVNFMVITKGAARMAEVGARFALDGMPGKQLAID SDMSAGAIDHATAKERRETEQRETTFFGSLDGASKFVKGDAIAGLLITLLNLIMGLIM GILIHGMPVATAFETYAILTVGDGLVSQIPSVIISIAAALLLARGGASGSTDTAIFSQ FSKYPGAIGAVAVLMVLFALVPGLPFVPFIAGGGALGYLAYRVKTNNDAAAQEEIDAK VEEVQSPEKTKALGDILDLDDLHLEFSQDLVSMVLDPGTGLDARIANMRTHVATTFGL ILPEIRLTDEAELENGTYVVRIQGVEQARGTLHPDMVLALMPDNHAALPSGTDVTEPV YGAPARWIATKHQEDAALMGATVVSPPEILATHLLEVVKQSFPRLLTLKALRRLLREM TELSDEFRANANKKLLDELIPDKVPIDTLHAVLRLLLEERVSIRNMPLILESIAEARM RTTSPELITEHVRQRLGFQLVAEMKREDGTIPLVQLAPEWEDAFTTYQVETQSGLDIA LPPDTFNKLVDAMSEKINQVTEQGIFAAIVTSTRRRRYLRTILRSRGIQNPVLSFEEI GLEARPALVGMVAA" /product="Flagellar biosynthesis protein flhA." /transl_table=11 /note="Bacterial type III secretion FHIPEP, FHIPEP family, FlhA: flagellar biosynthesis protein FlhA, belas" /note="Conserved hypothetical protein" CDS 2085076..2085855 /locus_tag="Silicibacter_1920" /function="COG: Flagellar biosynthesis pathway, component FliR" /translation="MNFVGITPELMALFGAGFWHAAIVFLRIGAMTSIMLGFGEQLIP TQIRLVAGLVFTAIVAPALPQMPMPQTVMQYAGLMATEVVVGLALGLGLRMFMHMLQT AGSIAAQCTSLSQVLGGAGADPMPALGAVLWISGIAVAVMLDFHIHAAQLMIRSYDLF PVGIFPSASGLSEWGVHRVSATFAQAFTLAAPFLITAVVYNLTLGVINRAMTQLMVVF VGAPVITFGGLAILMIGAPMMLEVWGHGLLMFFADPGVGMP" /product="Flagellar biosynthetic protein fliR" /transl_table=11 /note="Flagellar biosynthetic protein fliR (Flagellar biosynthetic protein mopE)., Type III secretion system inner membrane R protein, fliR: flagellar biosynthetic protein FliR, belas" /note="High confidence in function and specificity" CDS 2085852..2086943 /locus_tag="Silicibacter_1921" /function="COG: Flagellar biosynthesis pathway, component FlhB" /gene="flhB" /translation="MSDENDDSDKSFEPTPEKLRKARQEGDVPKSNDLLQAASYLGLL IAFYTAGRSSIEQLGTVLMSMIDQPDRLAPVFFGDGIAAPVAWEFISDALTSVIAWFA VPAALVILAVFAQKAMVFAPKRIQPKLSRLSIIKNAKNKFGRSGLFEFAKSFFKLLLY SITLGVYLSWRLPEMIASVGTSPFTVVPFLVQLAMEFLILTLIIALAIGLVDAPFQQA EFIRKNMMSRKDVMDEMKNSEGDPHTKGQRKQKGRQIVSKQIAAAVPEADVVIVNPTH YAVALKWSRVSGSAPECVAKGVDGVAAMIREIAQENGVPLHSDPPTARALYATVEVGE EIAEEHYAPVAAAIRFAEEMRKKAKESIL" /product="Flagellar biosynthetic protein flhB." /transl_table=11 /note="Type III secretion exporter, FlhB HrpN YscU SpaS Family, flhB: flagellar biosynthetic protein FlhB, belas" /note="Conserved hypothetical protein" CDS 2086955..2087344 /locus_tag="Silicibacter_1922" /translation="MLAQMQAVTNAVYLREHAKIKPILDREAQLRGNLAMLKQQVEES RALVEQSHEIKALGVDLHWQKWHTNARRDINQDLAQVTAQKFRAMDKLRQAFGRKHAV ETMEQQFKSDAKERRNKMLFDRLMDLD" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0173 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2087621..2088130) /locus_tag="Silicibacter_1923" /translation="MAKLLPILMLILGIGGGIGAGIMLAPAPEMTEVAAKGDEHDMAT DEAGEDHSEAEEEEDPTEQNEFIKIKNQFVIPVVERDQMTAMVVLSLSLETKPGLSGK VHTYEPKLRDVFLRVLFDHANMGGFRGAFTRSEILDPLRTSLREEARRFLGKDVVDVL ILDITRQDV" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0174 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2088142..2088879) /locus_tag="Silicibacter_1924" /function="COG: Flagellar basal body L-ring protein" /gene="flgH" /translation="MKPLLAVKCAVLGLSLVGGCARMDHLGKPPSFTPANETQEHVAM LYQGLPVSSQTPRAVDNASLWSGSRGSLLGDRRATKKGDILTVVIEINEKASISNDTQ RSRNSSESLQVPQLLGLPQRLDERLPEGASSADLVDLGSTSSSGGSGSVSRSEKLELR VAATVVDVLPNGVLAISGSQELRVNFELRELLVSGYVRPDDISRQNEVTYDKIASARV SYGGRGQITDVQQPRYGQQVLDAVLPF" /product="Flagellar L-ring protein precursor" /transl_table=11 /note="Flagellar L-ring protein precursor (Basal body L-ring protein)., Flagellar L-ring protein, Flagellar L-ring protein, homology to flgH, belas" /note="High confidence in function and specificity" CDS complement(2088879..2089295) /locus_tag="Silicibacter_1925" /function="COG: Flagellar basal body P-ring biosynthesis protein" /gene="flgA" /translation="MKLLPFLIGILFAQSALADILVPVRTIRAKEVITADDLVFKNVE SPGALSSPNEIIGQEARIALYASRPIHAGDIGPPALVDRNDLVKLIFRHGGLEITTEG RSLGRGAKGELIRVMNLSSRTTVTGRIRADGNIEVN" /product="Flagella basal body P-ring formation protein flgA precursor." /transl_table=11 /note="Flagellar protein FlgA, belas" /note="Conserved hypothetical protein" CDS complement(2089296..2090081) /locus_tag="Silicibacter_1926" /function="COG: Flagellar basal body rod protein" /gene="flgG" /translation="MRALKIAATGMSAQQLRVETISNNLANMNTTAYNARRAEFADLH YQQISRAGTVNASDGTVLPTGVQVGLGVRPAAVSVYLNQGALSQTGNELDLAIDGNGY FEVTLPSGETAYTRDGSFKRSAEGLIVTNDGYPVSPEITVPEDAKSISINGEGEVYAY FNDTIEAELLGQFTLSGFTNPKGLEAMGGNLFKQTEASGQPNTTEPGADGIGFLRQKY LEDSSVDAVREITELIEAQRGYEMNSKVISAVDQMMSATTQVR" /product="Flagellar basal-body rod protein flgG" /transl_table=11 /note="Flagellar basal-body rod protein flgG (Distal rod protein)., Protein of unknown function DUF1078, Domain of unknown function (DUF1078), flgG_G_neg: flagellar basal-body rod protein FlgG, homology to flgG, belas" /note="High confidence in function and specificity" CDS complement(2090091..2090807) /locus_tag="Silicibacter_1927" /function="COG: Flagellar basal body rod protein" /gene="flgF" /translation="MGSIGYTTLSRQSGLLNEMQAVANNIANSATTGYRSEGLIFSEY VKSAPGQESLSMGRANIRNTSLEQGTMNQTNGTFDLAIEGEGFFMVETPAGNRLTRAG NFTPNAEGDLVTADGYRVLDAGQAPMFVPGGAESISFGADGTLSADGQQLGQIGLFVP DEDAQILREDGVMFRVEGETLPAAGAQVLQGFLEGSNVNTIHQLARMIEVQRAYEMGQ SFLDHEDKRIRSAIDNLMKS" /product="Flagellar basal-body rod protein flgG" /transl_table=11 /note="Flagellar basal-body rod protein flgG (Distal rod protein)., Protein of unknown function DUF1078, flgG_G_neg: flagellar basal-body rod protein FlgG, homology to flgF, belas" /note="High confidence in function and specificity" CDS complement(2090807..2091085) /locus_tag="Silicibacter_1928" /gene="fliQ" /translation="MLTEGIFYDTLRQGILAAITMSLPILIAALVIGLTVGLFQALTS IQEMSLTFVPKLAGILVVFWLTMATMTQTLVAFFTGHVIPLIQGTGGL" /product="Flagellar biosynthetic protein fliQ." /transl_table=11 /note="Bacterial export protein FliQ, family 3, Bacterial export proteins, family 3, fliQ: flagellar biosynthetic protein FliQ, homology to fliQ, belas" /note="Conserved hypothetical protein" CDS complement(2091089..2091385) /locus_tag="Silicibacter_1929" /function="COG: Flagellar hook-basal body protein" /gene="fliE" /translation="MDIRSLTATSGYAAARPATKVDPDYNPTSLQEQAKTSFQDFTNT LAHSEQVSVQAMTGGADPHQLVQALAQTELAVETAVTVRNKVVEAYQEILRMPV" /product="Flagellar hook-basal body complex protein fliE." /transl_table=11 /note="homology to fliE protein, belas" /note="Conserved hypothetical protein" CDS complement(2091409..2091801) /locus_tag="Silicibacter_1930" /function="COG: Flagellar basal body rod protein" /gene="flgC" /translation="MSDFSKSLSVTASGLRAQAARLTHVSENISNADTPGYRRKTVSF QSVRDLETDVSQVRVGRVSLDRTELEQVYDPSHPLADETGHYEGSNVDLMIEIADARE AQRTYEANLKMFDQTRQMSSSLMDLLRR" /product="Flagellar basal-body rod protein flgC." /transl_table=11 /note="Flagellar basal-body rod protein FlgC, FlgC: flagellar basal-body rod protein FlgC, homology to flgC protein, belas" /note="Conserved hypothetical protein" CDS complement(2091818..2092207) /locus_tag="Silicibacter_1931" /function="COG: Flagellar basal body rod protein" /gene="flgB" /translation="MFERLNVFNIAYSMATHAGKRQALVSENIANADTPGYHAKDIKP FREVFAASEAQGDMIASRGSHINGVNGSGFDWAVTTDESSVDPNNNSVSLEEQILNGI EAKRQHDRALAIYRSSMNILRASLGRS" /product="Flagellar basal-body rod protein flgB" /transl_table=11 /note="Flagellar basal-body rod protein flgB (Putative proximal rod protein)., homology to flgB protein, belas" /note="High confidence in function and specificity" CDS 2092296..2093624 /locus_tag="Silicibacter_1932" /function="COG: F0F1-type ATP synthase, beta subunit" /gene="fliI" /transl_table=11 /note="[EC:3.6.3.14] , ATPase FliI/YscN, ATP synthase alpha/beta family, nucleotide-binding domain, fliI_yscN: ATPase FliI/YscN family, homology to fliI protein, belas" /note="High confidence in function and specificity" /product="flagellum-specific ATP synthase" /translation="MMKSIQALSQELANTRLAAPMGRVTGISGGEIEVSGLESQARIG DRLTLRRGKKDDLHGEVLAIGSDHIRMLPDTAPERASIGDAVLLFQTPEFAPDDSWVG RVIDPFGEPLDGKPMLRGVESRDLMESPPKAAARRGLGKRLSTGLAILNTVLPIVTGQ RIGLFAGSGVGKSTLMAQLAQNMEADVVVMALIGERGREVNHFVKEVLGPEGMKRAVV VAATSDQSALVRRRCAWAAMSVAEHFRDQGLNVLFMADSITRFAEAHREIAVASGEAP ALRGFPPSVTPLITGLCERAGPGLEGQGDITAVFSVLVAGSDMDEPIADILRGVLDGH IVLNREIAERGRFPAIDVSRSVSRSLPAAATKEENEMILAVRKFLGAYEQSEVMIRAG LYSEGNDLVLDQAVKIWPELDSFFGRNELDGIKGSFNRLALLLRRAGGGR" /EC_number="3.6.3.14" CDS 2093786..2094073 /locus_tag="Silicibacter_1933" /function="COG: Transposase and inactivated derivatives" /gene="IS" /translation="MRKSRFSEEQIIGILKEHQSRIGAKELCRKHGISDGTFYKLRSK YGGMEVSEANRLKALEAENAKLKKMLAEHMLDVGTLKGMQGMEAGDRHAFE" /product="Insertion element ISR1 hypothetical 10 kDa protein A3." /transl_table=11 /note="Transposase IS3/IS911, Transposase, belas" /note="Conserved hypothetical protein" CDS 2094127..2094921 /locus_tag="Silicibacter_1934" /function="COG: Transposase and inactivated derivatives" /gene="int" /translation="MPKNYNQRLACALAGIDPRVYRRRPSRPEETELRERLKELSGER RRLGYRRLHRLLGREGWQVNWKKIYRIYREEGLTVRKRGGRKVAIGTRAPMSIPQGPN HRWSLDFVSDSLSDGRRFRVLCVIDDFSRECLACVVDTSLSGQRVGRELDSTVRTRGY PCIVISDNGTELTSSAILRWQEDRKVEWHYIALGKHMQNGFVESFNGRLRDECLNEHL FANLRHARGLISAWHTDYNHHRPYMSIDGLTPREYHQRSVKDQTLM" /product="Hypothetical protein yagA." /transl_table=11 /note="Integrase, catalytic region, Integrase core domain, belas" /note="Conserved hypothetical protein" CDS 2094995..2095261 /locus_tag="Silicibacter_1935" /function="COG: Transposase and inactivated derivatives" /gene="IS" /translation="MKASKFTDAQKAFIIKQAEDGTSVAEVCRKAGISTATFFNWKKK YAGLMPSEMKRLRELEQENARLKKIVADLALDKEMLQDVIKRKL" /product="Insertion element ISR1 hypothetical 10 kDa protein A3." /transl_table=11 /note="Transposase IS3/IS911, Transposase, belas" /note="Conserved hypothetical protein" CDS 2095294..2096091 /locus_tag="Silicibacter_1936" /function="COG: Transposase and inactivated derivatives" /gene="int" /translation="MRADWQVSIRRACEVIRFDPRTYRYKSRRPGQAALEQRIREICQ TRVRFGYRRVHVLLRREGWEINAKKTYRIYKELGMQLRSKTPKRRVKAKLRDDRKEAV SPNDVWAMDFVHDQLATGWKLRVLTVVDTFSRYVPVLDARFTYRGEDVVATLEQVCKR TGYPATIRVDQGSEFISKDMDLWAYANDVTLDFSRPGKPTDNAFIEAFNGRFRAECLN AHWFMSLEDAAEKLEAWRRDYNEERPHGAIGNKVPADLMKSVHDTSP" /product="Insertion element IS476 hypothetical 39.2 kDa protein." /transl_table=11 /note="Integrase, catalytic region, Integrase core domain, belas" /note="Conserved hypothetical protein" CDS complement(2097051..2100443) /locus_tag="Silicibacter_1937" /function="COG: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases" /gene="hsdR" /transl_table=11 /note="[EC:3.1.21.3], Type I restriction enzyme EcoAI R protein (EC 3.1.21.3) (R.EcoAI)., DEAD/DEAH box helicase, N-terminal, Type III restriction enzyme, res subunit, gene of putative prophage 52A, belas" /note="High confidence in function and specificity" /product="type I restriction-modification system restriction subunit" /translation="MTQFVFLTADFPDLLAHAKKAESAALSDPRGACFWARLTLETAI KWIYRNDPSMRSPYQDTLAALIAEPSLGQLTGPAIVTKARFIKDHGNRAAHDSGKPIK PQDAAAVVRELFHVCYWMARTYAKDAKPDSSLQFDASKLEKTLTISASTVAQIQALKE KHDAHAKALKDAEAAALASEEGRKRLEAELAQVRAEIKEIRQANTAVQDDHDYNEAAT RDAFIDLLLNEAGWPLDQERDREFPVSGMPNDKGEGLVDYVLWGNDAKPLALVEAKRT MKDSRIGQQQAKLYADCLETMYGRRPVIFTTNGYEHWLWDDQMYPPRRVSGFLKRDEL VLLHQRRGTRKSLDGVSVDQGIAGRFYQQRAIRRVGEAFERDRQRKALLVMATGSGKT RTVIALIDQLMRANWVRRVLFLADRVALVKQAHNAFKTHLPTAASANLLKNHDPARND HSGARICLSTYPTMLGLIDDVKGGEKQFGPGHFDLIVIDEAHRSVYRKYRAIFDYFDG LLVGLTATPREEIDRDTYSLFELERGIPTDSYDLEDAVADEYLVPPRSISVPLKFQRD GIDYDSLSDEEKAEWDAIEWDDEGAVPDRVEAADLNRWLFNKDTVDKVLEHLMTNGIK VAGGDRLGKTIIFAKNSDHAKFIVERFDANYPHYMGQFARLIDYSVTYAQSLIDDFSE AEEAPHIAVSVDMLDTGIDVPEVVNLVFFKIVRSKTKFWQMVGRGTRTCEDLFGPGQD KQEFIIFDFCQNLEFFNENPKITDSPTARPIGERLFVSRVELISALDEAGNESPLAAD IKDRLHQEVLGMNLENFIVRQARRPVERFQSAEAWDTLDLDARLALIEEVAGLPTAFE DGRLAAKQFDLLVLNAQLLLLRGDAAFANLQRRIVSFASALESLSNVPAVTQELELVL AIQTDEFWQDINVEILEDVRRRFRNLAELIQPKERKNVITDFEDSIGTSTTIDLPEVG SGVDKVRFKTKTRKFIEAHSDHIALQKIRRGEQLTPADLQELERMLIDEGVADHDVLD GLQNEGGLGVFLRSLTGLDRAAAKALFSDFAAANQLSANQTEFIDLIINSLCENGVLD PKTFYESPFTDLDDMGIMGVFSETQSAEIIRLVRETNQTAAA" /EC_number="3.1.21.3" CDS complement(2100440..2102539) /locus_tag="Silicibacter_1938" /function="COG: Uncharacterized conserved protein" /translation="MKATDANLLNFINSAPQFVIPIYQRTYSWTERECRQLWEDIRRA GRSGHIPVHFLGSVVYIEESLSNTSSRAPLLVIDGQQRLTSVTLLLSALSRKVADEEP VDGFSFKKIRNRYLMDPDESGERAFKLLLSKTDRTTLNAVVSGDDLPEPQSMRVAENF KMFSRWLDQDDTAVSEVCSGLAKLMIVDVALSREHDNPQLIFESMNSTGKELSQADLI RNFVLMGLEPKLQTRLYEQYWRRMEEGFGQAAYASHFDGFMRNYLTVVTGSIPRLDDV YDAYKAYSQEQIGGGREVEDLVREVWEFSQYYGALVLGQEKDKALALGFRDLRELKVD VAYPFLLEVYKDYKTGALSADDFLEVVRLVEAYVFRRAICSVPTNSLNKTFATFGREL KKDRYLESVKAHMLNMKSYRRFPRDEEFVARIQDRDLYNFRSRTYWLRKFENFGRKER VEVDDYTIEHILPQNEKLSTEWQAALGSDWAAVQEKWLHTLGNLTLTGYNSEYSDKSF AEKRDMAGGFKESPLRVNNGLGSLDAWNEAAIKSRAQRLAQQAAEVWAAPSLSAEILA TYRTPTEMANGYTIEDHPHLTSGKMRDLFEQFRREVMALDPSVSEQFLKIYVAYKAET NFADVVPQAKALRISINIEPYELHDPRGMAVDVTDVGRWGNGNTEVKLTDHEDLPYVL GLVRQALDRQLGADEPA" /product="Hypothetical protein HI1375." /transl_table=11 /note="Protein of unknown function DUF262, Protein of unknown function (DUF1524), gene of putative prophage 52A, belas" /note="Conserved hypothetical protein" CDS complement(2102564..2103493) /locus_tag="Silicibacter_1939" /translation="MRGEFLGVQSEIIAELFQPLGDGDELDQGFYMDLFRDSIPSPVE PRDPEPSDLDENGEIYLPGDIEADAAYRAAFERFQDRLEAYANASSDEGKAWIYFAEF FADQDTTEAQIVRALENAFDVFQEYGGDELSNEYFLTVQRFLEKYSLRYDLRRPFSLH PTLPGIFSKLIRELKAAAIADEALAGLMNDFEDSVRDLRDNKSDRRMRQCIEAQFKLI EAFAQRYPGINPDSLGQMCHHLPTWPHQTVRAAIGNLYGFASNYPGIRHAGNPASKIR DIEMRDLVSMSIVLAGFTPYLTDLIDTDRIYSD" /product="predicted protein" /transl_table=11 /note="gene of putative prophage 52A, belas" /note="Hypothetical protein" CDS complement(2103495..2104658) /locus_tag="Silicibacter_1940" /function="COG: Restriction endonuclease S subunits" /gene="hsdS" /transl_table=11 /note="Type I restriction enzyme EcoKI specificity protein (S protein) (S.EcoKI)., Restriction modification system DNA specificity domain, Type I restriction modification DNA specificity domain, gene of putative prophage 52A, belas" /note="High confidence in function and specificity" /product="type I restriction-modification system, S subunit" /translation="MSSVALGELVEIRGGGTPDKKVPDYWDGDIPWASVKDFKSTSLA STIDRITQAGVANSATQVIPAGNIIVPTRMAVGKAAINEIDLAINQDLKALIPSQRID RQYLLHALLANAKTLEDQATGATVKGIKLDALRSLQIPLPPLQEQRRIAGILDQADAL RRFRTRALDKLGTLGQAIFHEMFGASSPDHAAWEKINLSELVLPDDRINYGVVQPGPH DPEGVPIIRVADLASPVVAFDSIKRIAPSIDAEYGRSRLKGGEVLIGCVGSIGTTIIA PPEFAGANVARAVARVPLDTSRCEPRFVAEQLRSQRIQNYFTKEVRLVAQPTLNIKQI RETEIILPPKELQVSFVERVHEIEAQKAQHAAALTACDVLFASLQSTAFRGEV" /EC_number="3.1.21.3" CDS complement(2104655..2106229) /locus_tag="Silicibacter_1941" /function="COG: Type I restriction-modification system methyltransferase subunit" /translation="MLPSHIRAQIDQIWNAFWSGGVSNPLSVIEQITYLLFIKRLDEI HTREEAKANMLGSEMERRIFPEGTFTYKVSDDPKDDETIERPYDDLRWQRLINFENRE KMKLMDQHVFPFMRTMAEEGTAFATHMKDARLGFSSPALLDKVMRLLDVIQMDDRDTK GDVYEYMLGKIASAGQNGQFRTPRHIIELMVRLMAPTPKDTICDPAAGTCGFLVTAGE FLRETHPEMLRNPEQRQHFHNSMFHGFDFDPTMLRIGSMNMVLHGVENADVAYRDSLA EEHGADTGTYSLILANPPFAGSLDYDATAKDLQKVVKTKKTELLFLALFLRLMRTGGR AAVVVPEGVLFGSSKAHKDIRRIIVEDQKLDAIIKLPSGVFRPYAGVSTAIMIFTKTE SGGTDNVWFYDMEADGLSLDDKRTDLLPSEKLGPVPAEALTEEEHAKNNLPDILARWG ALEVEGERPRTAQSFMVPLAVIQATGTWDLSLNRYKEVAHKEVDHQPPKEIIAELRAI EAEIADGLDRLEEMLG" /product="Type I restriction enzyme EcoEI M protein" /transl_table=11 /EC_number="2.1.1.72" /note="Type I restriction enzyme EcoEI M protein (EC 2.1.1.72) (M.EcoEI)., N-6 DNA methylase, N-6 DNA Methylase, gene of putative prophage 52A, belas" /note="High confidence in function and specificity" CDS complement(2106698..2108305) /locus_tag="Silicibacter_1942" /function="COG: Integrase" /translation="MSRRYKIKAKKHRVYDVRAVMELFDVCRNTVSNWVGAGLMPSHG QGPHLFHGLELNRFHAARRAQGRHNLRLDQFYCLCCKVAVSPHPLSINLWQTERESRM AGGACSECGATVMKLLDATGYERLKNALSPNANLSKIDERKEEDSVDIGTEAPLRVPE WPSMNDRINHDWQLYAGRYDEKTMDAHLTSTRDFEDFIEGRCFSQVRDKDVGKYRTSL LAKGEMPQEDGGLSASTIRHRASHLAAFVKWLTKQEGYRRLGVTLPDYFDLPRQKMAR ALARPDKLYPSVEEAQAMVQSMPSLTLAQRRDRAIVACAFLTGLRAAALSSMRLKHID CEAETAVQDAREMRAKNGKSFTVRWFPVPSEISLVVVEWKRELESNGFGGEDALFPDS KYLSTPKTSPAPLPILETSGAVNKAFRIASTGVGQSYSPHSARHCLKALGDQICTRSE ERKAWSLNLGHESMVITEAHYGKMTEATRMQVLAAIKQKDETSDDEKDLMLRYLLHAL TPGSPEYRAARQLVRQREAALDDGVLE" /product="Tyrosine recombinase xerC." /transl_table=11 /note="DNA breaking-rejoining enzyme, catalytic core, gene of putative prophage 52A, belas" /note="Conserved hypothetical protein" CDS complement(2109546..2110406) /locus_tag="Silicibacter_1943" /function="COG: Integrase" /gene="intB" /translation="MPVLSDAKIRALKPKEKPYKQADFDGLFLLINPGGSKLWRFKYR WMDKEKLLSFGKYPDLSLKQARDKRDAARKVLAEGKDPSFERKREQAAKEAEHRETFS KLADALLEKKRLEGKSASTLVKTEWLHSLLCADLGKYPISQITARDVLVPLRKMEAKG RNESALRMRSAAGQVFRYAIAQGLIENDPTFGLKDALTRAPVKHRSALINPEQVGGLM RAIEGFDGQPTTRIALQLLAMTALRPGELRMAEWAEIDLEKRFGRSRLIAPKCAARTW CHWRQRRWAS" /product="Prophage P4 integrase (Int(P4))." /transl_table=11 /note="Lambda integrase-like, N-terminal, gene of putative prophage 52A, belas" /note="Conserved hypothetical protein" CDS complement(2110833..2111243) /locus_tag="Silicibacter_1944" /function="COG: Prophage antirepressor" /translation="MSSQSGVTNAQTPVVISEAGVYKLAFLSEEPEVREFQDWAMNTL LPTIIHDGFYMMGEEEMFSTPECDVTQTLIQSASLKASHEADLELLCSVILPELRADG AFFRDLPSYVEQPVENRELRVRQAVSLKQKRRLP" /product="Hypothetical 37.8 kDa protein in PTP-CTL intergenic region" /transl_table=11 /note="Hypothetical 37.8 kDa protein in PTP-CTL intergenic region (ORF2)., gene of putative prophage 52A, belas" /note="High confidence in function and specificity" CDS complement(2111713..2113623) /locus_tag="Silicibacter_1945" /translation="MEFTSFTEYAYGQTQYIPRQLELPLMPATDASTEVVQTSISPKG SCTSSTTSSLSNQVLADLKGTLQARGMTTTEPQLEALADVVGTLCDMADGSCAPTIQL SSLDPGMGKTTALIHFLRRVVASPDHLDVGVLVCLSQLDEIQRLVDEAELDEADFAVF CSDDQVSNLSATDIDAAQVLFTTQQMLAKRCAGRRLSEVREFYYLSQARAVRVWDETI EPGKVITVSADELAAMLSPLRRINPVLADQVQALQFDLATSPPGQIFQMPALEALFAI STFEISAAKDFREQLDKLKALAGRAARIYRTYGNQAIALNIRDALPADIAPLLVLDAS GRVRHTYSAWETHRGGLVRLSSAPKDYAPLQIHLMDQGGGKDGWRRNGDQLAREVATI IDTKPDDPWLIVHHKAQAGIDPVGLIQRYVERADLSQVNFLHWGTHQATNAFKDVPNV VLAGLLHLPDSQLLGLACASSGRSVADHPPAELIKQIELGELGHGVIQAVGRGSVRGF DAGKCLPCSAYIIAGRRYGLSEALPQWFPGCQLTSWRPRHKPLSGRVKQAVEFVKRQQ SERCGEPIMFSAIMDHIGEKDRSNFNRSIRKHRDFKAAIESLGLMDVNVSGGRGYDAL QAVFEPVVCAAA" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="gene of putative prophage 52A, unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(2113776..2114504) /locus_tag="Silicibacter_1946" /function="COG: Predicted metal-dependent hydrolase" /translation="MVRLVLTYGDERIPYDVSQDERRTSKVAIHVDPDGSVSVEAPPG FSECRIAEAVQRRARWVIKHVQEARERHKHRMPKEYVSGEQVLYLGRRYVLKVIPVDG PPKPASLVGSRLQVETQRQTSEDIRARVRAWYKVRGRDYLARRLEQVSKSLPWVRQVP ALRLLEMKRQWGSCSPSGEIIVNTHLVKAPRPCIDYVLIHELAHLKHHDHGPEFWSLL DNHAVGWRKDKAQLDNLVEILTAD" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Protein of unknown function DUF45, Protein of unknown function DUF45, gene of putative prophage 52A, belas" /note="Hypothetical protein" CDS complement(2114508..2117786) /locus_tag="Silicibacter_1947" /function="COG: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases" /gene="hsdR" /transl_table=11 /note="[EC:3.1.21.3], Putative type I restriction enzyme MjaXP R protein (EC 3.1.21.3)., Type I site-specific deoxyribonuclease HsdR, Type I restriction enzyme R protein N terminus (HSDR_N), hsdR: type I site-specific deoxyribonuclease, HsdR family, gene of putative prophage 52A, belas" /note="High confidence in function and specificity" /product="type I restriction-modification system, R subunit" /translation="MSQQIPDTREEAASKLPALHMLIAMGWTYLSPASALGLRGSTRA VLLEPVLRQYLKAHRFAFKGQRYPLSDAGIAQVLKEITVTGLSEGLRYANEATYKKLT LGVTVTEFVDGQKTSVTVPLINWNTPQDNSFYVSEEFSVQRAQGNDHYRPDLVCFVNG IPLAVIEAKRPTHATKETAMVEEGISQHNRNQKEGGIPALYVYSQLLLSISGSGGRYG TTGTDKKFWSTWHEEEIAEADMQALKSKPLTATQIDALFADRPAWARNEFEELHSGKL MLTEQDRLIVSLLRPDRLLDLTRRFIFFDSKIGKIVARYQQVQGTKAILAQVANKSED GSRKGGVIWHTTGSGKSNLMVFLAKALLTDPELADCRLIIVTDRVDLEKQLARTFLTG GAFGSVVATKKDGENAKVQSGEDLAQRIGHGNERIIFTLLQKFNSATKYPECKNTSDK LIVLVDEGHRSQGGENHERMRQALPNAAFIAFTGTPLLKKDKTRNKFGPILHAYTMSD AIADGAVTPLVYEERKPLLDVNDAAIDAWFDTFTQSMTDKQKSDLKKKYSSRGQIYGA EDRIDRIALDIATHFNEHFKQHCPGLKAQLATDSKLSAIRYKEALDATGLVSSAVVIS PPDTREGHDDTDDRKTPEVQAWWEKTVGKDAEAYETAVISDFGTDGDPDILIVVDKLL TGFDEPRNAVLYIDKLIKGHNLLQAIARVNRLHEDKQFGYLIDYRGILAELDTSIKDY QNLAAKTQAGYDIDDLKGTFEEVSVEYKRLPSRHDRLWSLFAEVENKKDREQFRRVLV PRMEDDGTGHSIDLSQKIREDFYEALTEFGMCLKLALASRSFYEDSSFDEAVIATYKR DLKFFTEIRTQARQDAGETVDFSQYEQQIRQLVDKHVIGQDIVEPEGFIRVVDLGQAG SPEDWSDEKTRTEADVIKTRIRKTIEQELIDDPYAQKVFSDLLKDAIKAAEAMFDHPH KQYVMFKDLEQQVSNRATPGLPDSFSGNYRAQAFYGALLEAKGLGTDQLLDQEMLVQE AFHIDQVVSEAVQAHSINPANIEAAISKSLLPRYFQKFGGLDQAEMLVGQLVAIVRSG GNRA" /EC_number="3.1.21.3" CDS complement(2117898..2119151) /locus_tag="Silicibacter_1948" /function="COG: Restriction endonuclease S subunits" /gene="hsdS" /transl_table=11 /note="[EC:3.1.21.3], Type I restriction enzyme StySJI specificity protein (S protein) (S.StySJI)., Restriction modification system DNA specificity domain, Type I restriction modification DNA specificity domain, gene of putative prophage 52A, belas" /note="High confidence in function and specificity" /product="type I restriction-modification system specificity determinant" /translation="MNAVSKASAFPATVQPGIPKLGKTPEGWLRAPLSRFLVEVRRPI KMADNEAYRLVTVKRARGGVVERGTLDGREISVKSQFIVEGGDFLISKRQIVHGACGL VPQELAGSVVSNEYSVLNSNGNIDLQFLNYLAHTVFFQQTCFHSSIGVHVEKMIFKLD RWLKWEFDLPPLSEQRKIVEILSTWDRAIEVAEAQLANARKQKRALMQSLLTGKRRFP EFEGQEWREVWLADLVSAIRGGGTPDKSNTAYWGGEIPWVSVKDLKSDVLQQTKDTIT QSGLNSSAANYFPKGTIVVATRMAVGAAVQLGKGMAINQDLKAIIPGPDVRNDYLFHF MQMVQPKLEALGTGSTVKGITLGDLHRLVIGLPATLEEQDKIVQMLDVARKDISSMCV NIGKLRAEKKALMQQLLTGKRRVTG" /EC_number="3.1.21.3" CDS complement(2119151..2120650) /locus_tag="Silicibacter_1949" /function="COG: Type I restriction-modification system methyltransferase subunit" /gene="hsdM" /transl_table=11 /note="[EC:2.1.1.72], Type I restriction enzyme EcoKI M protein (EC 2.1.1.72) (M.EcoKI)., Type I restriction-modification system M subunit, N-6 DNA Methylase, hsdM: type I restriction-modification system, M subunit, gene of putative prophage 52A, belas" /note="High confidence in function and specificity" /product="type I restriction-modification system, M subunit" /translation="MTPITQSEINKAAWGACDTFRGVVDPSIYKDYVLTMLFLKYVSD VWKDHKASYAAHYPDSPELVAAMMERETFKLPETASFDALHGRRHEPGNGERIDKALH AIEEANGSKLRDVFQDISFNSNKLGDEEQKNDILRHLLEDFAKTALDLRPSRVGNLDI IGGAYEYLISRFAATAGKKAGEFYTPAEVSELMARLVDPQPGDDICDPTCGSASLLMK CGRLIREGGSKAYALFGQEAIGSTWALAKMNLFLHGEENHQIEWGDTIRNPKLRTSDD MLRHFDVVVANPPFSLDKWGVESAEADKFARFRRGIPPKTKGDYAFILHMIETLKPKT GRMAVVVPHGVLFRGSSEGKIRHKLIEDNLLDAVIGLPEKLFFGTGIPSAILVFRKDK ADDSVLFVDASREFVAGTNQNALDMTLIEKIVATHQTRQTVEKYAYRATLAEIIENDF NLNIPRYVDTFEEEEEIDLMAVRAERMKLKGEMAELEDRMEGYLQELGY" /EC_number="2.1.1.72" CDS 2121342..2121752 /locus_tag="Silicibacter_1950" /function="COG: Prophage antirepressor" /translation="MSSQSGVTNAQTPVVISEAGVYKLAFLSEEPEVREFQDWAMNTL LPTIIHDGFYMMGEEEMFSTPECDVTQTLIQSASLKASHEADLELLCSVILPELRADG AFFRDLPSYVEQPVENRELRVRQAVSLKQKRRLP" /product="Hypothetical 37.8 kDa protein in PTP-CTL intergenic region" /transl_table=11 /note="Hypothetical 37.8 kDa protein in PTP-CTL intergenic region (ORF2)., gene of putative prophage 52A, belas" /note="High confidence in function and specificity" CDS complement(2122084..2123262) /locus_tag="Silicibacter_1951" /function="COG: Site-specific recombinase XerC" /translation="MSETISPAFTFVKDGVFYFSRRIPKDLKKHYTSPRIAYSLRTRS ARIAEARARRAADQLDEYWYHLRSKDVELPGKHMLRMQSEGRVAVSAAAPEISSSSVL LSEAVGIYLRLKGQGRPETFHRAAERSCGYVIDACGDKQLDAFTKADANKFRDALIER GLAGSSITRIFGTVRAVTNFAASELGLTLTNPFNGVYYDREAGVSDRNPIPADALKVV QGQCRQLDDDMRWLVALVSDTGMRLAEAAGMARQDIERRSDGSLVAWVRPHPWRRLKT KGSERVVPLEGQAKWAAERLLSEVVESDFLFPRYNRKPQTNANAASAALNKWIKQMTP EGCTMHSFRHSMRDRLRAVECPSDIVDQIGGWQTDGVGHGYGSGYPVEVLQKWMKAVT " /product="site-specific recombinase, phage integrase family" /transl_table=11 /note="DNA breaking-rejoining enzyme, catalytic core, gene of putative prophage 52A, belas" /note="Hypothetical protein" tRNA complement(2123327..2123398) /locus_tag="Silicibacter_31" /gene="Silicibacter_31" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS complement(2123658..2124680) /locus_tag="Silicibacter_1952" /function="COG: Ribonucleases G and E" /translation="MKGTQIILDHINGREAAARMVDGVLDDFLIAGDAPLPGTIYRAR ADRPVKGQGGMFLTTPDGPAFLRQVKGLAPGQMLLVQVTGYAEPGKALPVTQKLLFKS RYAIVTPDAPGLNISRSIRDDDERDRLLEIAHSEMDGVEYGLILRSVCAGADPDEIAE DIAAMVTAARQVLEDSSNQSEVLHEGDAPHLQAWREWTAPADIEQEPGGFERCGVLDA LEALQSGKIAIGGGAYLYVEPTRALVAVDVNTGSDTSLAAGIKANMACARNLPRALRC LGLGGQIVIDAAPMPKKDRRAFETALRTAFKSDPEETTLAGWTTLGHFELQRKRARLP LSEILS" /product="ribonuclease, Rne/Rng family" /transl_table=11 /note="identified by match to putative ortholog SPOA0079 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2124677..2125258) /locus_tag="Silicibacter_1953" /function="COG: Nucleotide-binding protein implicated in inhibition of septum formation" /gene="maf-2" /translation="MAFILGSGSPRRLELLAQLGVTPDDIRPPDIDETPQKGELPRDY CARVTRQKAEAVTSNPEDLVLCADTTVVLGRRIMGKPRDAGEAAEFLLALSGRRHRVI TSVALRKQDRLWQKDVVSQVKMKRLSDEELNAYLATGDWEGKAGGYAIQGPAGALIPW ISGSFTAIVGLPLAETATLLQTAGYPLYKDTAS" /product="maf protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0078 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2125390..2125608) /locus_tag="Silicibacter_1954" /function="COG: Translation initiation factor 1 (IF-1)" /gene="infA" /translation="MAKEDTLEFPGVVKELLPNATFRVELENGHEIIAHTAGKMRKNR IRVLAGDRVQVEMTPYDLTKGRINYRFK" /product="translation initiation factor IF-1" /transl_table=11 /note="identified by match to putative ortholog SPOA0077 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2125693..2126571) /locus_tag="Silicibacter_1955" /function="COG: Predicted amidohydrolase" /translation="MKIATAAYPLDWLDSWTHYEDKLSKWVSEAADGGAELLVFPEYG AMELATLDGADIAGNLEASIQAVSDKMEDAAQLHLKLAAEHNVHILGASAPVHAGFTR PVNRAEFYSPQGKRAHQDKQIMTMFERDPWDIAPGGPLKIFETALGKIAVLICYDSEY PLLARALSEADMILVPSCTEALAGYWRVRIGAMSRALEQQCVTVMSSVVGSAAWSEAV DEGCGMGGVFGPPDTGFPSTGVIAEGTLNQPGWTFAEVDLQAVQNVRSAGVVRNKTHW GEQDSRLQNLVNHNLL" /product="hydrolase, carbon-nitrogen family" /transl_table=11 /note="identified by match to putative ortholog SPOA0076 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2126665..2127252) /locus_tag="Silicibacter_1956" /function="COG: Histone acetyltransferase HPA2 and related acetyltransferases" /translation="MALRVDTLTGAALEAALGDVARLRIEVFRAWPYLYDGDLAYERD YLQSYRDSDSAILVGAFDGDQLVGAATGTPMVDHADDFAAAFAETNIDIAEVFYCAES VLLPAYRGQGAGHGFFDAREAHARTLGFGKSAFCSVIRPADHPLRPADYAPLDPFWRK RGYAPLPGVMAQFSWKDVDQKDETAKSLQFWCRDL" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0075 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2127252..2127647) /locus_tag="Silicibacter_1957" /function="COG: Ketosteroid isomerase-related protein" /translation="MNDTIARYFDAFNAGDTDGMLACLSEDVAHHVNEGNIRVGKEKF AAFCAHMSHCYKEELTDMVIFATPDATRAAAEYTVNGTYLATDEGLPEARQQSYKLPA GSFFDLRDGLITRVTTYYNLSDWIKQVSA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0074 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2127648..2128103) /locus_tag="Silicibacter_1958" /function="COG: Protein-tyrosine-phosphatase" /gene="arsC-2" /transl_table=11 /note="identified by match to putative ortholog SPOA0073 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="arsenate reductase" /translation="MTELPQSILFCCDHNAVRSPMAEGIMKKLYGTGTYVQSAGVKND LEIDGFCISVCQEIDVELSRHRSRSFDEMEEWGDDISSYDLVIALSPASQRRALELTR FFHLDVEYWPIMDPTGLGETREAKLESYRQTRDQILERLIARWGNPMET" /EC_number="1.20.4.1" CDS complement(2128107..2128586) /locus_tag="Silicibacter_1959" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MSRISQIELDDRNLPPPTPEIEQERKVAIFDLIEENSFVLPKRD ERDVPEGPYHLSLSIREKRLVFDVQTEGGDKAAEFHLSLSPFRQVVKDYYQICESYFT AVKTLPPSQIETIDMARRGIHNEGSRVLQERLEGKAEVDTDTARRLFTLICVLHFGG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0072 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2128866..2130170) /locus_tag="Silicibacter_1960" /function="COG: Histidinol dehydrogenase" /gene="hisD-2" /transl_table=11 /note="identified by match to putative ortholog SPOA0202 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" /product="histidinol dehydrogenase" /translation="MPVFLTSAEADFEQSFTTLLNAKREDSPDVDAVVADIIADVRGR GDAALLELTQKFDRLDLPDSAALRITAEEVDDAIKSVSEAERAALELAADRIRAYHAE QMPENKSWTDAGGATLGWRWSAVSAAGLYVPGGLASYPSSVLMNAIPAKVAGVERLAV TVPTPDGQINPLVLLACRVSGVDEIYRVGGAQAIAALAYGTETIAPVDKITGPGNAFV AAAKRRVFGKVGIDMIAGPSEILVIADKDNNPDWIALDLLSQAEHDESAQSILITDDA EFGSAVAVAVDKRLETLERRAIAGASWRDFGAVIVVRDMDEAAALSNRIAPEHLELCV ADPEALSKKTIHAGAIFMGQYTPEAIGDYIGGPNHVLPTARSARFSSGLSVMDFIKRT TLSQMTPDALRSIGPAAATLAESESLEAHGLSVLARLEALNR" /EC_number="1.1.1.23" tRNA complement(2130389..2130460) /locus_tag="Silicibacter_19" /gene="Silicibacter_19" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS 2130705..2131976 /locus_tag="Silicibacter_1961" /function="COG: UDP-N-acetylglucosamine enolpyruvyl transferase" /gene="murA" /transl_table=11 /note="identified by match to putative ortholog SPOA0137 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="UDP-N-acetylglucosamine 1-carboxyvinyltransferase" /translation="MDSILVTGNGPLNGVIPIAGAKNACLTLMPATLLSEEPLTLTNA PRLSDIRTMTALLQSLGAEVSSLQDGQVLAMSSHGLDNHTAHYDIVRKMRASILVLGP MLARDGHAVVSLPGGCAIGARPVDLHLKALEAMGAELDLRDGYVHAKAPGGRLTGGTV DFPIVSVGATENALLAATLAKGTTVLKNAAREPEIIDLAECLIKMGAQIEGHGTSTIT IQGVDRLHGATHPVVTDRIELGTYMLAPAICGGEVELLGGRRNLLEAFCQKLEEAGIE IAETEAGLKVSHKTGRVKAVDVVTEPFPGFPTDLQAQMMALMCTAEGESVLEEKIFEN RFMHAPELMRMGAQIDVHGGTARVTGVERLKGAPVMATDLRASVSLILAGLAAEGETR VSRVYHLDRGYEHVVRKLSEVGAKIERIKEE" /EC_number="2.5.1.7" CDS 2131976..2132452 /locus_tag="Silicibacter_1962" /translation="MADATFEDGRERPLNLVAYEAEDLEVISSLAQDAVFPVTEMSWR ASARRFAILLNRFRWEDRDAAERRGRAYERVQSVLVIENVLRVASQGIDRRDRDMILS VLSVTFEPGEDGAGELLLTLAGDGGIRLSVEALEVTLKDVTRPYHAPSKQVPQHGV" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0138 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2132494..2133288) /locus_tag="Silicibacter_1963" /function="COG: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /gene="catD" /transl_table=11 /note="identified by match to putative ortholog SPOA0434 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="3-oxoadipate enol-lactone hydrolase" /translation="MPLADLGDVQLNYRLIGPEDAPAVVFAHALGTDQTIWDKVLQRL PQNIRVLTFDLRGHGGSSVPPAPYSMGNLIRDVERLMETCAIQDSLFVGLSIGGMIAQ GLAVKRLDLVRALVLSNTAAKIATPEIWTRRMDTLRRGGMPAISVDTLQRWFPRSAWK SDVYAATQTLLERTDVEGYLGCCAAIAGTDFYTPTSGLRLPALGIAGTEDGSTPPDLV RETLDLIPGSQFTLLRRTGHVPPIDQPEAFAERLTSFMKDTGHLAK" /EC_number="3.1.1.24" CDS complement(2133438..2134415) /locus_tag="Silicibacter_1964" /function="COG: Threonine dehydratase" /translation="MTSLAMIEAAAARLKGHARYTPLLSSPFLDEIAGRRVFVKAECL QHTGSFKFRGGWAALSAMDPELRKRGVIAYSSGNHAQGVAAAAKAHGAPAVIVMPADA PQLKIDNTRALGAEVVLYDRVAGESREAAAEPLVAERGLTLIKPYDEPEVIAGQGTTG LEIAEQAAAEGVTKADVLVCCGGGGLTSGIALALEAHAPNMRVRPAEPEGFDDVARSQ SSGQIETNPAPTGSICDAILTPAPGDITWPLLSRLCGPGLTVTDDQALEAMAIAFQRL KIVLEPGGAVSLAAALFHPDQIDGDAVIAVATGGNVDPGQFTAALTRFL" /product="pyridoxal-phosphate dependent enzyme" /transl_table=11 /note="identified by match to putative ortholog SPOA0435 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2134412..2135260) /locus_tag="Silicibacter_1965" /function="COG: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /translation="MSRFETSDGLSLYFEEHGSADGIPLICLPGLTRDGQDFRYALPH LGDYRVILMDLRGRGRSDYAQDPASYNILTEAGDVIALMDHLGLTRAALLGTSRGGLV AMAIAGTARDRLQAVILNDVGPDIAEEGLGRIFEYLGHRPAAKTHAAAARILEAAMRD SFANVPEGRWLEEAQTFYKETPDGLELRYDARLREAMLAQAKALSEMEEKPSLWPWFA ALDGLPCGVIRGAHSDILSRETFDEMRRRLPALQAVELSDRGHIPFLDEPDALLLIHT VLKDIK" /product="hydrolase, alpha/beta fold family" /transl_table=11 /note="identified by match to putative ortholog SPOA0436 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2135283..2135972) /locus_tag="Silicibacter_1966" /function="COG: Predicted hydrolase (HAD superfamily)" /gene="dehII" /transl_table=11 /note="identified by match to putative ortholog SPOA0437 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="haloacid dehalogenase, type II" /translation="MTIKTCIFDAYGTLFDVSAAARQAATEPAFAQIADSWATLAQDW RQKQLQYTWLRAVTGAHDDFWQVTHDGLDWAMEAAGLQDQTELRQRLLDLYWELAAYP EVPAMLRALKDAGYETGILSNGSPKMLAGAVESANLGDTLDAVLSVETVGVFKPSARV YDLVGERFGTRKSEVLFVSSNGWDAGCAAGYGFVTAWVNRAGEPVDRLPWRPAHVLTD LQPIPEIAANA" /EC_number="3.8.1.2" CDS 2136139..2136567 /locus_tag="Silicibacter_1967" /function="COG: FKBP-type peptidyl-prolyl cis-trans isomerases 2" /translation="MTAVKNGDTVRIHYTGKLTDGTVFDSSEGRDPLEFTVGAGHVIK GMDQGMLDMAEGDKKTLEIACEDAYGPINPSARQAVPREGIPDDIPLEIGTMLQMQTP EGQVLPVTVVDVDEASVTLDANHRLAGQDLIFDVELVAIA" /product="peptidyl-prolyl cis-trans isomerase, FKBP-type" /transl_table=11 /note="identified by match to putative ortholog SPOA0438 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2136820..2137893 /locus_tag="Silicibacter_1968" /function="COG: Spermidine/putrescine-binding periplasmic protein" /translation="MRNFLIGAALTLGGTMAQATEYLNIFTWDGYVAPEEVTAVNALL KEQGYDIEVRVMDTLAEGPEQMFDVIRSGDVDVSFLTLNYINMEGVPFSNLLQPIDVS SPRLSNAQALLPELSAIEMGMSDAGPLYLPFGGGAYGIWANDDVVAEHPTSVAELLKP EWKGRISLTSGQVQPNVALALMAMGEPPFAVQDASGDRKKVAELQKADGALQTTLSTL YDQVGFFWSAGPEFRDDFAFVASYGPGASAHVAEGGNWSLVNFDEGSTVWLDTINFSK KLEGDKLEAAEIFANYFIGKEVQERIVNGLGMVAATTLVDANPMLDENPNFFAEDLFW PPYTKVANNVMNMLSKRASGGGS" /product="Spermidine/putrescine-binding periplasmic protein precursor" /transl_table=11 /note="unique gene to TM1040, belas" /note="High confidence in function and specificity" CDS 2138044..2139195 /locus_tag="Silicibacter_1969" /function="COG: Membrane-bound lytic murein transglycosylase B" /translation="MSMNRRQFGAVAAAFGLASCAGPVTTAGRSRPSGTSSLPQDLRP IRNADYAKWVAAFRERAERQGFSQDLLSRAFRGTGYLPGVVKRDRNQTEFSRTLEDYL SIAVSDERVRKGRAAYARHRGTLDAIERRYGVEAHVIAAVWGLESYYGERRGNVPVIS ATSTLAYDGRRGALFEKQLIAALKILRNGDIAPRNMTGSWAGAMGHTQFIPTSYLSFA VDFTGDGRRDIWSDDPSDALASTAAYLARNGWQKGLKWGGETGPGAPSGSVIQPQPGG PEFVTTGNFRALKRYNNSDSYAIGVGHLSDRIAGGGPLRASFPPDRYGLRKADRIALQ KGLTANGFDIGAADGVIGPKTREAISTYQRRQGIAVTGDPSLELLRRLN" /product="Membrane-bound lytic murein transglycosylase B precursor" /transl_table=11 /EC_number="3.2.1.-" /note=", Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) (Murein hydrolase B) (35 kDa soluble lytic transglycosylase) (Slt35)., Lytic murein transglycosylase, MltB_2: lytic murein transglycosylase" /note="High confidence in function and specificity" CDS complement(2139221..2139529) /locus_tag="Silicibacter_1970" /translation="MTIKAILIAVPLMVVGWFSVLIVVALLSDEAPAYVVVLPKASLL RDLPEESAILSSTKLTITLTSDQAGFARDLYAAGARLVLPAGLPGCLPLPAGASRRQQ " /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(2139519..2140571) /locus_tag="Silicibacter_1971" /translation="MKLLWRWIKRLGLVALLLMLSLSAPILYVETMCRGDATPQPYAA RLDPAHHRPETRTLMTFPEWYIVHAYDDYAEVLRTGDPHDYAYLPAIGGFWTSICALN AEAAAYGDVDGGTKQMVYVIGVSFTAELALKATYEETLGRLFAMLRGPEHSPLDKVSA RQAADYASFLQQVPWYKWRFRADATELAQKATPALRDRERRLALGLEYRAKAAYADII ADAVAQVGADALTLRMIVAGAGAETLERFEGVTIISERPEGIEIETPRYRALTHLLKR MATEGIEIVEVAGNDDILFTALSTRASEPGALLSRTRQGYGDTRHLISLKVPDLAERL RQLESQGLTLEHIHDY" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0095 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2140568..2140978) /locus_tag="Silicibacter_1972" /translation="MTLLQKLSVGYFVALMIAASLNYIPGLTDEAGLAFGIFALDLYD DALHVASALWALIAGLMSHRAARSFLILFGLAYLGDGIFGFFTGYGYLDLGIFTNEAL GMEISLRRVLANLPHLALGGVAVWAGLRNLGQRQ" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0094 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2140975..2142462) /locus_tag="Silicibacter_1973" /function="COG: FAD/FMN-containing dehydrogenases" /translation="MKALTRRAAMIGLGGAAGWGISRWLGADLPVYDGTARISAPTGP QILNDASGLSATPVQKHLILRDDADQSLIAALRRELSEARTEGRPVNIGAARHSMGGQ AIPRNGTAITFDNGAVALDSAQQTYRVHAGARWSQVIAALDPKGWSPKVMQSNNDFGV AATFSVNAHGWPVPFGPMGATVKSLRMLLPSGDLVTCSATENSELFGMAMGGYGLVGL IVDLDVEMVKNARLSPTFDLLDAADFPRAFRAAVEDPAVTMAYGRLNVERASFFEKAL LVTYRETPDQTELPQASGSGWMAHAASRLYRAQLGNETIKSFRWWNETRVGPALGSGE VTRNSLINEPVATLDDRNPDRTDILHEYFVGFDAFDAFVTACREVIPASYQEFLNVTL RYVAQDDQSMLSFATTPRIAAVMSFSQELSQRAEADMARMTRALIDRIVAIGGAYYLP YRPHATLEQFVAAYPQAPRFAQAKRALDPDLVLRNNLWDSYLDRL" /product="FAD binding domain protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0093 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" rRNA 2145074..2147914 /locus_tag="Silicibacter_54" /gene="23S rRNA" /description="RNA" rRNA 2146714..2148170 /locus_tag="Silicibacter_3" /gene="16S rRNA" /description="RNA" tRNA 2148318..2148391 /locus_tag="Silicibacter_35" /gene="Silicibacter_35" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS complement(2148664..2149752) /locus_tag="Silicibacter_1974" /translation="MIITLEASNDELSSLTDDEAEDLFSRLLDADRMGRHIVVMNRRI CEWGKQNTKLSGRNLSHLIDIKEAFATRGNISSYATCFLKVVLGNQPISIVDNCFMMG HKEFLQGEYASSKTMLIVENLNSDSKLYEFIFEKSITKTKVPGWAVEFILGGGNTTVT AFEGEIAKKRITVCVVDTDKISPCDKLGTTARKVLNRHSKRNLQQYDPATPYVGTAIE TVGHELENYIPLSSVKYLDAFSCPTCLDDLVDQEVAKSSADCLWLYFDIKKGIDGKRL LDKERTNIKNRSVLEWICKNTKIKLEDLHSLKIPGIGSTIVDHFLKNDLAKEQYTRFT NTDYWEHLFLEHLEKLLWFLAAPKTLRS" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(2149762..2151369) /locus_tag="Silicibacter_1975" /function="COG: Predicted ATP-binding protein involved in virulence" /translation="MRISYSVENIRRLSSVEPIEIRPITVLVGRNSAGKSTFLRSLPL IRQSLETRSSAPILWYGDFVDFGDFQTAVSSEAKDGYAVFSFKVRDLEKRHRSTVSHH TNYLLRYRTQTVKIDEAIVKYYVGAESGKTALKKISLEIPSEDLICDISYRGRLGTSG SLTVNGEELPYILQNFEIVNSSNDLFSAPSLISKTKDANSNVRRRHSYQDIAVKELER FLRREIPRISSSDTFRNEVANILSGTPHLEEKWKRLSETANTASFRKYYENIQKGTSG KSKDSILTIQRTFRALQVLDVINDDLQYFFSGVSYLGPARAAGERFYRKQELEVSEIL PNGSNFPMFLDSLSTGQKRSFSDWVESIFGYGVELKSHEGHISIHLKAGEKSVNVTDT GYGVSQILPVLATVWWSSRRTTERWGIPYGRRQAIRTIAIEQPELHLHPAHQAKLADV FVKGIKLGQSETNINIVNILIETHSEALINRLGELIELGSISSDDVQVIVFAAEDDIN SPTRMSVANFDSNGALENWPFGFFNYS" /product="conserved hypothetical protein" /transl_table=11 /note="Hypothetical protein" CDS complement(2151668..2152816) /locus_tag="Silicibacter_1976" /translation="MEADILHSGFDGLKFTVETDIPPELRTALAEAKAQAIQTNAETV MEFGSVALSVRRTGGSAFSAHTGEYGAEWYFLDPENRPANNPGITVDFRAFLLATGGL DAAEKHFRTCMDAFGIRYADHLLRVSRVDYAIDFLAPWFEPDREALVVPPGTRVQEHT GIDETETHATGARVTGLRAGAVANRQLVIYDKRQEVMQKGKLGWLTIWNDARAQLNRP PLDLTDRMTSQVWRFELRMGSKQLRNRWEMRSWQDLRDMVGDAYAEFCEKIRYTCPTT DSNRARWPTHDLWREVASVIANDLYENCSGVLPSEVIETNRAEHMRMLDRQILGLLVS RAAASEVQPHEFAEFLDTHIEAIERMSEEHATPLAERIRKATERYRFK" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(2152997..2153284) /locus_tag="Silicibacter_1977" /translation="MALRGRGRNGLAPFLHSDTGQNTMANQPAHKFKIGLITATVWQN DGFYSVDLSRSYKTDTGEWRNTGSFHHSDLLNLAKCAERAEIWIGRQISAK" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(2153334..2153621) /locus_tag="Silicibacter_1978" /translation="MPRDHSNTGANMTAIHTTTNSTPSHPATDYWDGLITETEAADYL CQSVRTIQKWRVTGYGPKFYKSGRSVRYRRRDLSEWIEQRSHSSTSSYSAV" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 2153935..2154054 /locus_tag="Silicibacter_1980" /translation="MRGLALDATLGGTLYTSQYIDDVTLFQSPCDGVSVLKLI" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(2153695..2154294) /locus_tag="Silicibacter_1979" /translation="MKLALEDIAAIYRRTTENSAPHPSTKETNRELSSIAKRAAQLAQ QIEDMSYEASLTFEQQNIEDETAHIDGVPSTASLVLSNEFQDTDTIAWTLEQGDIVNV LRGIERAAKSGIERQSPQKSGRRLNPALDLWMSNVAAIWKEFSTLPFSRSVTDQNEPV SPAARFCAIAFERLYHQTPTSRVMLAMKDHITRHRAQER" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(2154574..2155809) /locus_tag="Silicibacter_1981" /function="COG: Integrase" /gene="int" /translation="MRSFASTVLPRKRSREETKLPKLTKRTVEALMPEAKDYFLWDSQ IAGFGVRVMPSGAKTYQAQYRKGGRTRRVSVGRHGKITVDEARKLAKEIMGQVAKGEN PAEEISQHRKAPTVAALCERFFEAHAKERCKPSTQKEYRRAIDLFIVPALGSFKVVDV ERRDIAELHHKFRDKPHQANRTLGVLSKMFNLAEIWGLRPDGSNPCRHVPKYREVKRE RFLSQSELQRLGQVLTEVEREGSETPHMVAAFRLLILTGCRLGEIQTLKWGYITANGM ELPDSKTGARRIPLPQPARDVLARLPRTPGHPYVIEGKLPGQYATDLQHPWRRIRDRA GLCGVRIHDLRHTYASNAVSAGMPIQMVGRLLGHTQIQTTMRYAHLADDPVRQAAEEN AARLGSMVGDIGRPRLRAV" /product="Putative prophage CPZ-55 integrase." /transl_table=11 /note=", DNA breaking-rejoining enzyme, catalytic core, Phage integrase family" /note="Conserved hypothetical protein" CDS 2156186..2156488 /locus_tag="Silicibacter_1982" /function="COG: Transposase and inactivated derivatives" /translation="MRKSRFTEAQIIGMIKEQEAGMPTAEACRRHGLSTATFYKLKAK YGGMEVSEAARSKALEDENAKLKRLLADTMLDNVVLKDLLGIEAASPPSVRGQGRP" /product="Insertion element ISR1 hypothetical 10 kDa protein A3." /transl_table=11 /note=", Transposase IS3/IS911, Transposase" /note="Conserved hypothetical protein" CDS 2156527..2156763 /locus_tag="Silicibacter_1983" /function="COG: Transposase and inactivated derivatives" /translation="MRDHDISQRRACRLVGVDPKTVRRERPPDCVEIRKEMHEIAAKW RRFGYRRIGVLLERKGMIMNHIGARKAKGPGDLL" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 2156847..2157272 /locus_tag="Silicibacter_1984" /function="COG: Transposase and inactivated derivatives" /gene="int" /translation="MPVAEWPNARWSLDFVSDSFGASRKFRILAVIDDCTRECLCLLA DTGLSGARVARELSALIRIYGKPGCVVSDNGTEFISRVSLKWTDAHEVPWHYIDPGQP QQNAFIESFNGSLRDELLNEEIFDSLDDARRKLALWRHD" /product="Insertion element IS476 hypothetical 39.2 kDa protein." /transl_table=11 /note="Integrase, catalytic region, Integrase core domain, belas" /note="Conserved hypothetical protein" tRNA complement(2158043..2158129) /locus_tag="Silicibacter_59" /gene="Silicibacter_59" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS 2158394..2159308 /locus_tag="Silicibacter_1985" /translation="MSRQDTRMKDKVSGPARLQRLVPSGAILALTGALVLAGCEEGAN LPFLQPKDNAEQGLPSNSTKLVERDVEAPDVFQVTEAGLWDGRPSIGGVWVAHPDVKD PERVIIRNNANGKFVIGALFRRERAIPGPRLQVSSDAAAALSMLAGAPVELNVTALRR EAVEDIPPEAEIPEIEGLEEQPQVAETAAVETQALDPIAGGAAAAIEAAAPAPEPAPA APTPSARSALAKPYIQIGIFSVEANAKRTADQMRNAGIIPTVYEQSSNGKAFWRVVVG PAQSKGERTQLLKAVKAAGFADAYAVTN" /product="lipoprotein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2738 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2159369..2160550 /locus_tag="Silicibacter_1986" /function="COG: D-alanyl-D-alanine carboxypeptidase" /translation="MTIRCISLTCIGVLAGLWIASSTTAVQAFETKARAAYVVDQGTN TVLLSKNADVPMPPASMSKLMTLYVAFEAVRDGRLTMDERLPVSEHAMSYKGSTMFLD TTDRVRVEDLLRGIIVLSGNDACAVIAEALSPDGTEAGFARYMTRRARELGMNDSTFM NSNGWPDDGHRMSVRDLAILAEHLIEDFPEFYPMFAEQVFEFDGRAPSNTRNRNPLLQ LDIGADGLKTGHTQEAGYGLVGSAKQGDRRVIFVISGLNSTPERAEESEAIVNWSFRQ FTKKTIAREGIAVEQAEVWMGDSPTVGLVPAEDLEILLPALSDDAVKAEVVYTGPVTA PIQAGQQLAELVVHPEDLPEMRLPLVAQADVGTGGFPVKVMTAARVLVQRFLNGPEDA T" /product="D-alanyl-D-alanine carboxypeptidase" /transl_table=11 /EC_number="3.4.16.4" /note="identified by match to putative ortholog SPO2739 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2160547..2161191 /locus_tag="Silicibacter_1987" /function="COG: Thymidylate kinase" /gene="tmk" /transl_table=11 /note="identified by match to putative ortholog SPO2740 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="thymidylate kinase" /translation="MTQNQGSGLFLTFEGIDGSGKSSQCRLLAEHLRGLGREVVLTRE PGGSEGAEEIRRLVLEGDPDRWSAETEILLFTAARRDHLERTILPALSAGKVVICDRF ADSTRMYQGLSRGDLRATVDELHALMIGREPDVTILIDMDPETGLARAKGRQGTEERF EDFGLALQEKMRAGFLALADEFADRFRIVDGARDMDAVAADVARIVEAELEQRV" /EC_number="2.7.4.9" CDS 2161188..2162309 /locus_tag="Silicibacter_1988" /function="COG: ATPase involved in DNA replication" /translation="MSEVDDLPRADQAEGAPHPRETAHLFGHAEAEAEFLSAFSSERL HHAWLIMGPRGVGKATLAWRIARFLLATPPVEDDGLFGAPPPPQSLDVAPDHPVSHRI LALAEPGLAAITRSYNDKGRLRDQIVVDDIRVLNRFFGLSSAEGGRRVVIVDSADEMN VNAANALLKMLEEPPARTTLLLISHQPSRLLPTIRSRCRTLRLGPLAPDDMQTALEQA GAALPDDPTYLAALAAGSVGAAMRLLSLDGMKLYGELLAIVDSLPRLDRQRAMALAEK AAARGGAERFELMLTLLDVLLVRLARTGATGLAPTPEAAPNEGAILTRLSPNPQRARA WADLAATVTERTRHGQAVNLDPAALVLDTVFKMQDTASR" /product="DNA polymerase III, delta prime subunit, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2741 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2162370..2163173 /locus_tag="Silicibacter_1989" /function="COG: Mg-dependent DNase" /translation="MTTPQITDSHCHLDFPDFEGELPEVLARAAEAGVTRMVTICTKL KNEAAVRALAEKYEPVFYAAGTHPMSAADEPLVSVEELVALAQHPKFVGIGETGLDYH YTADSAEIQKRSLSIHIEAAQETGLPLIIHARAADDDMARILREAYAVKEYSCVMHCF SSSASLGRAALDLGFYLSMSGIAAFPKSQELRDIFAEAPIDRVLVETDSPYLAPPPYR GKRNEPAYTAHTAKVGAEVFGLEYAEFAARTQENFDRLFWKAAQYEAAA" /product="hydrolase, TatD family" /transl_table=11 /note="identified by match to putative ortholog SPO2742 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2163173..2163970 /locus_tag="Silicibacter_1990" /function="COG: Metal-dependent hydrolases of the beta-lactamase superfamily I" /translation="MPTLRCTILGCGSSGGVPRLGGHWGDCDPKNPKNTRRRCSMLVE QDGPDGTTTVLIDTSPDMRSQLLDAGVGRLDAVVYTHPHADHVHGIDDLRMVVFNMRE RIPVYADAPTKADLLDRFGYAFIQPEGSSYPPILEMRDIEGAFTISGAGGSIPFLPFL VEHGAIDALGFRIGDLAYLPDVAKIPEPVVPVLEGLECWIIDALRRTPHPTHFSYQDA LSWIDRMQPARAVLTNMHIDLDYDTVEAETPDHITPAFDGMVIHSDY" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO2743 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2164007..2164939 /locus_tag="Silicibacter_1991" /function="COG: Predicted permeases" /translation="MIFNLINVVLPVFVVVGIGYGLTLRGVFQQVQIDGLMKFAQGVA IPFLLFRAMAGIDLQSGFDPRLLISFYTGAAICFFAGFMGARVFFKRDWEDCVAIGFC CLFSNSVLLGLPITERAFGPDALVGNYAIIAFHSPFCYALGITAMEIIRNRGQGGLRT ATSVFRSIFKNNLILAILAGFAVNLSGLSVPEPVDDALALVAKAGLPTALFALGGIMV QYRPEGDLRTIAMVCCIALLLHPAIVYALGSALDVRQDLFRSGVLNAAMAPGVNGYIF ANMYGRAKRVAASSVLIATASSVVTVLLWLTLLS" /product="malonate transporter, putative" /transl_table=11 /note="identified by match to putative ortholog SPO2744 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2165063..2165608 /locus_tag="Silicibacter_1992" /function="COG: Peroxiredoxin" /translation="MFAGQKLPQVTFRTRVRDDSIEGPNPFRWQDMTTADYFAGKRVI LFSLPGAFTPTCSTYQLPGFENGFEDFKAEGIDEIYCMSVNDSFVMNKWAEAQGIKNV KVIPDGSGEFTRKVGMLVAKDNLGFGMRSWRYAAIINDGVVEAWFEEPGRDDNHAEDP YGESAPENLLKHLKEKVSEAA" /product="antioxidant, AhpC/Tsa family" /transl_table=11 /note="identified by match to putative ortholog SPO2103 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2165675..2167066) /locus_tag="Silicibacter_1993" /function="COG: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases" /translation="MSRESALSRASRYFEAGDFQSDLAHLVTYRSESQNTAPEARMEC RRYLEEAMLPRLRALGFDCEIIDNPDPTGGPLLIGERREGEALPTILTYGHGDAVLGQ EGRWREGLEPWVLVEEGDRLYGRGTADNKGQHLINIAALEAVLAERGHLGFNTRIVIE MSEEVGSVGLPDVFRAYKDRLTADVLIASDGPRLQPDVPTMFMGSRGGTTFDLVVETH EGAHHSGNWGGLLSDPAMILAHALACITDVRGQIKVPEWRPDSLTENVRMALRDLPVA GGQGPAVNPDWGEEDLTPAERVFGWNSFTVLAMVSGVPEAPVNAISGWARATCQLRYV VGTDPEDVVPALRRHLDAHGFESVEIRCHERGFFAATRLDPDHPWAQFVGESIRRTSG ALHVLPNLAGSLPNDSFTDILEVPTIWVPHSYRGCSQHAPNEHVLKSVYHDALRVMAG VFWDLGEQGGPLA" /product="Glutamate carboxypeptidase-like protein." /transl_table=11 /note=", Peptidase family M20/M25/M40" /note="Conserved hypothetical protein" CDS complement(2167063..2168628) /locus_tag="Silicibacter_1994" /function="COG: Gamma-glutamyltransferase" /gene="ggt" /transl_table=11 /note=", [EC:2.3.2.2] , Gamma-glutamyltranspeptidase 1 precursor (EC 2.3.2.2) (Gamma- glutamyltransferase 1) (GGT 1)., Gamma-glutamyltranspeptidase, Gamma-glutamyltranspeptidase, g_glut_trans: gamma-glutamyltransferase" /note="High confidence in function and specificity" /product="gamma-glutamyltranspeptidase" /translation="MSALSQTQITRKYVIETAGGVVASQHRQAAEAGAAVLRAGGDAV DAAVATSFVVGVLEPWMSGPAGGGAAVHWRADTGEAVAINFGMRSPKGLDLANYPLSG DGKAGDLFPWERVVDDRNVEGATAIAVPGTVDGIGQAHARWGRMSWAELLAPAIAHAK EGMLVDWYAALMIASTARNLARDPDAAALFLDDGVWPKGSGWTAVPDNRLDQSRMADS LAHIAQHGPRAFYEGDLAQAMARDVQDKGGCLSADDLAGYRAWMGNARPVSYRNAQFH VMPGLTAGPTFARVLEQLESADLSTPASAYVAYARALDRAYAERLGKMGDDGEVPEAP GCTTHFSVVDRDGNMVSHTQTLLSIFGSRVVSPATGFLMNNGIMWFDPEQGRPNSLAP GKACLMNVCPILGETVDTRFAFGASGGRKIVSAVSQLASFVVDGEMDIEAAFHTPRID MSGGEQIIADETLPPEVLGALNAEKPTVPTRRTVSPYAFACPAGVMRKDGKNSGCTEV MSPWGDAITEGQT" /EC_number="2.3.2.2" CDS complement(2168625..2169608) /locus_tag="Silicibacter_1995" /function="COG: ABC-type oligopeptide transport system, ATPase component" /translation="MSDVLTLNGVTKTYSVKQGLFGARKPLTAVNNVSLSLGKGEVLG LVGESGCGKSTLAKLLLGLEKPTSGQVLVDGAPMDALDRRALAGRLQPIFQDPYSSLN PRKSIYDLISLPLRVHKIGDSTSQRKAVKEMLDVVGLPQRVMNTYPSQMSGGQRQRVA IARALVMKPEIVICDEPTSALDVSVQSQILNLLGDLRREFGLTYLFISHDLAVVEHLA TRVAVMYLGRIVEEAPVAELFETPKHPYTRALLSSVLTPEPGLGVPETALGTAYPNPI APPSGCAFHPRCPLATAHCKTQAPRTIATAQGRVECHYEDPDSPMPRKDAA" /product="Oligopeptide transport ATP-binding protein oppF." /transl_table=11 /note=", [oligopeptide] , ABC transporter related, ABC transporter, CP_lyasePhnK: phosphonate C-P lyase system protein PhnK" /note="Conserved hypothetical protein" CDS complement(2169605..2170600) /locus_tag="Silicibacter_1996" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component" /gene="dppD" /translation="MSDTLLSVKNLTLDIPTGSGTLHAVRGIDFDLMRGETLSIVGES GSGKSLTSLAVMGLLGKSIKRRADEMRFENIDLLTANRRVMRDLRGNRMAMIFQEPMT SLNPAYTIGDQLTETLLLHRKVSKSAARARAIELLEKVGITAAESRLSQYPHQLSGGL RQRVMIALALMCEPDLLIADEPTTALDVTIQAQILRLLVDLTREMNMAMILITHDLGV VARVADKVAVMYAGELVETGPAADVFATPSHPYTRGLLRCIPQPGKTERGAALGTIPG IVPSLIGEVSGCAFRTRCLHARPECRADIPLRGEASHEFKCIHPDGALSHEGEAV" /product="Oligopeptide transport ATP-binding protein oppD." /transl_table=11 /note=", ABC transporter related, ABC transporter, CP_lyasePhnK: phosphonate C-P lyase system protein PhnK" /note="Conserved hypothetical protein" CDS complement(2170604..2171500) /locus_tag="Silicibacter_1997" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /gene="appC" /translation="MTDATDPLYQEIQGPTPRQMLKTRALGHKGLIFGLCVVGLLVVI ALLAPVLAPHNPYEQSLMNRMVPPVFLGGTWEHPLGTDHLGRDYLSRLIYGARVSLLI GAVAALISGVIGTAMGVAAGYFGGKVDAVVTFLINVRLAMPVVLVALAVVAILGGSLT VVVCVLGLLLWDRFAVVMRASTLQVSRRDYVAAAQVIGASTPRILLTEIMPNIFNNLI VVITLEMAHAILLEAALSFLGLGVQPPTPSWGLMVSEGKNMMLFEPWLVLIPGAVLFL LVLAINLMGDGLRDVTAPEGRS" /product="Dipeptide transport system permease protein dppC." /transl_table=11 /note=", Binding-protein-dependent transport systems inner membrane component, Binding-protein-dependent transport system inner membrane component" /note="Conserved hypothetical protein" CDS complement(2171502..2172419) /locus_tag="Silicibacter_1998" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /gene="appB" /translation="MLPFILKRLGLALLVAFTVSFISFSLLFLSGDPAAALAGETASG EDVEALRRLYGFDRPMLVQYGEWLFAAIRGDFGESYYFKLPVAGLIAERLQVTMLLGV CGISFALLTAVPLGVAAAIRPNSIIDRVALFLSVAGQAMPSFWFGLILIVVFAIQLGL LPPSGAATWRHFIMPTIVLGYYAMPAIMRLTRAGMLDVLNSDYIRTARAKGAGEGRVL FKHALRNAIIPVVSLAAVQMGFMLGGSIVVESVFALHGAGFLAWESIARNDLPTVQAL ILVFSMFYIIFTFLADVLNAWLDPRMRSS" /product="Hypothetical ABC transporter permease protein yddR." /transl_table=11 /note=", Binding-protein-dependent transport systems inner membrane component, Binding-protein-dependent transport system inner membrane component" /note="Conserved hypothetical protein" CDS complement(2172520..2174043) /locus_tag="Silicibacter_1999" /function="COG: ABC-type dipeptide transport system, periplasmic component" /gene="appA" /translation="MFDLSLPRSALIALTLASTTAMPALAEKAAGTLNVAFTKELENV DSYFNSSREGVVMQRAVWDGLIYRDPNTNEYIGNLATSWEWIDDTTLEFKLREGVTFH NGEPFNADDVVYTVNYVANEENGVKTQRNVNWMKSAEKIDDYTVRIHLKDKFPAAIEF LSGPVSMYPNEYYAEAGPSGMGLKPIGTGPYKVTEVVPGQHFVLEANETYHDSPKGQP EIAKIDIRTIPDVNTQMAELFSGSLDLIWQVPADQAEKLAQLGQFTVANESTMRVGYL QMDSAGRSGEDNPFTNAKVREAVNYAINRQELVDALLKGSSQVVYTPCFPSQFGCVQD VTTYEYNPEKAKELLAEAGYPDGFSTEFYAYRDRQYAEAIVSYLNAVGIDTDFKMLQY SALRDLNMKGEVPLSFQTWGSYSINDASAMVSQFFKHGSLDSTRDDEVLDWLNVADSS TDPDERIEYYTKAIQKITGEAYWAPMFSYNTNYVFTSDVSYTPTADEVLRFVDMSWN" /product="Periplasmic dipeptide transport protein precursor" /transl_table=11 /note=", Periplasmic dipeptide transport protein precursor (Dipeptide-binding protein) (DBP)., Bacterial extracellular solute-binding protein, family 5, Bacterial extracellular solute-binding proteins, family 5 Middle, nickel_nikA: nickel ABC transporter, periplasmic nickel-binding protein" /note="High confidence in function and specificity" CDS 2174195..2174956 /locus_tag="Silicibacter_2000" /function="COG: Transcriptional regulator" /translation="MEKKPNSLFVGTLAKGLRLLRAFDESHVSLSLAELVARTGLEKS AVQRLAYTLHHEGMLERDPGTRRYRPSHAWLELAYAYYWSDPLISRALPKLIEFSRAY GEIVNLAQISGDHIIYSLRLPNQRTQFAASIVGRRLPALGTASGRVMLSTWSDAEVEH ALETWPVHSATPKTIIDRDVIAQDIARARQEGFAITKAQMMLNEISLAVPVISIDGRA DAALQVSVSSLTFDEARLKEEILPALLDTASGIPG" /product="Transcriptional regulator kdgR." /transl_table=11 /note=", Bacterial regulatory proteins, IclR, Bacterial transcriptional regulator, pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family" /note="Conserved hypothetical protein" CDS 2175140..2176327 /locus_tag="Silicibacter_2001" /function="COG: Aspartate/tyrosine/aromatic aminotransferase" /translation="MKTTSITHRLADLGGAKWDLHTAARDRSDRGEDIVEMTIGEPDV ALPEPLARAATRAIEAGRTQYSNGRGENGLRDALAESYSARRGRCFERDNVLCFPGTQ TALYAVMQGVAETGDEVLVGDPLYATYEGVIRATGADMVPVPLKAEHGFRMQADDIAQ RITERTRAILLNTPHNPTGAILRPAELEAIAEIALKHDLWLISDEVYEDLVFDGNSFT SPLTLEQIADRTIAVSSISKSHAAPGMRSGWAIGPRSFMDALLPVSETMLFGNQPFIA DVTEEAVRAGSTVAEGMRQRFAKRAQYLADRLEAETVLRVHRPEAGMFALVDVSPLGM DCDAFAWALLENAGVAVMPGSSFGAHLQNWVRLALTVEDAAMTKAVDRISEFARSVAV AAQ" /product="aspartate aminotransferase, putative" /transl_table=11 /note="identified by match to putative ortholog SPOA0066 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2176434..2177717 /locus_tag="Silicibacter_2002" /function="COG: Predicted UDP-glucose 6-dehydrogenase" /translation="MADGQPNQEQICVIGLGYVGLPLAVEFGRSRPVIGFDIDQSRID ELRLGDDRTREIDRDTLQSAQHLALTSDISEIAAASIYIVTVPTPIDATRRPDLRPLL SATRTVAQVLKPGDTVIYESTVYPGATEEDCVPLLEEISGLVFNADFGVGYSPERINP GDKTRRLPDIVKVTSGSSPETAAKVDRLYASIVRAGTYPAPSIRVAEAAKVIENSQRD INIALINELAKIFNRMEIDTEAVLKAAGTKWNFLNFRPGLVGGHCIGVDPYYLTHKAQ EVGYHPEILLSGRRLNDGMGAYVAQQMIKAMLRRRVQVVDSRILVMGLTFKENCPDLR NTRVVDVIEALRDFGVTVDVFDPHADPEEAYAEYGLRLIQHPETECYDGTILAVAHQE FKDMGAEVLRSFGKADALLYDLKYVLPAEDADLRL" /product="UDP-glucose/GDP-mannose dehydrogenase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0556 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2177737..2178687 /locus_tag="Silicibacter_2003" /function="COG: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D" /gene="ansA" /transl_table=11 /note=", [EC:3.5.1.1] , Glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.-) (Glu-ADT subunit D)., Asparaginase/glutaminase, Asparaginase, asnASE_I: L-asparaginases, type I" /note="High confidence in function and specificity" /product="cytoplasmic L-asparaginase I" /translation="MTICVIHTGGTIGMAPSPEGFAPKTGIVEAELDRLQRIGAIEAD FRVVTASPLIDSANATSADWNWIMAQIAAHDDDCAGFVVTHGTDTLAFTAAALSFGLK GLRKPVVITGAMLPLSEEGSDGSDNLRDAFRAVEQAAPGVWVQFAGKLLHGARVRKSH SVAFDAFNASPTDAAPLRAAETLGIFEYGDATALIAAVAPGMNASLISYAVEQAAGIV LRCYGSGTVPEGLGLRKAMLQARDTGVPVLAVSQCAEGGISLGTYAAGAMLAQTGAID GRDMTVEAAYAKLLHALSQSADLATRREILETRLCGEWAL" /EC_number="3.5.1.1" CDS 2178788..2180215 /locus_tag="Silicibacter_2004" /function="COG: Na+/alanine symporter" /translation="MQALEQFFGVIGDLTWGWSLVPILVIFGSFITVATGFVQIEFFG RMFRVLTRGRTDTGQISAREALLVSVGGRVGGGNIAGVAVAITLGGPGAVFWMWAIAL VGMATSLVECSLAQLFKRADPLTGQYRGGPARAILHGLGENYRWLAVIYAICLIAAFA LGFNAFQGNTVAGAAEASLGIDRLWTGIFLAIVTGFIVFGGIRRIAKASEVVVPVMAV GYLLMALIVILTNIGEIPQVLRSILANAFGFEEAVSGGMGAALAQGLRRGLFSNEAGL GSAPNVAATAEVNHPISQGITQAFSVFIDTIIICSCTAFVILLSDVYVPGATDIDGVA LTQSAMVSHLGAWSQYFMTFAILLFAFSSVIYNYYLGENAISILTKTPHAMTLLKLVV VGIVFLGAVAPNATSVFFFSDPLMGVLALVNLLALMMLFPIALRVLQDFRKQLKAGVE RPVLRMEDFPDLDLDPNAWPNRGQS" /product="sodium:alanine symporter family protein" /transl_table=11 /note="identified by match to putative ortholog SPO2370 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2180258..2181172) /locus_tag="Silicibacter_2005" /function="COG: Transcriptional regulators" /translation="MTKPIDPQQANRLLSTIKSRIETLPPKLKTAAKYVIDSPGDFGL DPIRVSADKAGVSPNTLTRLAEVFDYEGFEDFRAPFRAALVTDREADLGSEWLDQLAA GDQTSALQARAARNALNITARSLRLMTPERTTAIVDAMTSARHCFVTASRSTHALAYY FHYVGRMALPTLELVPRHMGDAADDLLDIGPQDCLFAMTFAPYSTSTIRAIRMAREAG ATVILLSDSDTIAPGVRADHQLTFSAQSPHHFGCLSGAMVLLESLLSHLIHAGGADAQ ARISRYETLRQDSGVYWSAKRLPRTPSR" /product="Putative HTH-type transcriptional regulator CPE0189." /transl_table=11 /note="unique gene to TM1040, belas" /note="Conserved hypothetical protein" CDS complement(2181236..2185288) /locus_tag="Silicibacter_2006" /function="COG: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase" /gene="ppsA" /transl_table=11 /note=", [EC:2.7.9.2] , Pyruvate phosphate dikinase, PEP/pyruvate-binding, PEP-utilising enzyme, mobile domain" /note="Specificity unclear" /product="phosphoenolpyruvate synthase" /translation="MTHPKTSIRFPFRSEGLPVSTPFLPPCIAQTVKICICFASIAAF LSVAPTAAYAIPSPELVLGSVSSLSQILAVVVATISGFGAIIASRLGLKTRSGGRKFP VKTMTALILLIVALGFANHWQWQSHKTEEQLRLQATLTRPAQFAGTEIKDEELKETSY SAQETHAQGITTEEASALLSNGDVKFFDIRETAENAMGTLPGADHIRFPDFRENPPLA PGDTVVLFCHNGNRSSETCTELAKLGIDCRFITGGIEKWIVEGRDFSDSRVQSLSDLR AIPEYPNKSRLINTETFKSYMAGEHVQIVDTRYPGDFETGHLPGAINIPLRALTSEEL ARRISRLRKVPTVAACYDRRSCFMGQVLGLELTQAGIPFEGRYTVPWEYFIAPPPKPH VVEWLAEQESGLWDKAIAGLSAALLWGHAKSHLLLSLLALAAISRVLVLPIALKSESD QITLRRHKADLEALKTRLAHDPMRKARAIRAFYAQHGLTPMRNMAALLFLPLMMLGLQ AAERAAAEVAGGFLWIADLGAPDPMWIAPVLTCGLAGAYLVLAIAKSRRAAFLWLVLG LPALFLLTMGLSAAGNLYLAMSLTGLLVQYLYVSGAFARKIQLRKRLPDGVHALAQTE ALSTAGNKALRLSQMSRAGFPVPKAVVLTDRFLNQFKDADDPKQQQMAASIWRNVGPR PCAVRSSASNEDGADQSFAGVFDSVLDVNKETLCAAIRSVLASFASERADSYGSAEAG HANILVQEMVNATFAGVLFTQDMQAPGMMLLEWVEGCGEDLVSGRKTPGTARFGRVSG LAAQDTYAPPFDPANLLQMGRAIEALFERPQDIEWAWSEGQFYILQSRDITTVAIGSA SEQAAAEEWRRLFAARSHTEDSDAIILEQDEMSEVLPRPTPLSFSLMSNLWAPGGSLD LASRALGLPYNLPEGEDAHLVRLFGKTYVDTALKKELSMDLRGNRANRMRKQLTPTLE GFEREVLPALLDRIEDWQALRFEALPRHKLLKTISVLRDYFVTEIYVEAEKINLLAAF AMQEANAAAQGDPALRSHLMQAELKYSPASLLAQCTGTEEEAQARALELMGHRAMFDY ELSTPRYYEAPGLLFTLLDPSHHGLEPAELPSGVPETLRQTLEIAIAFQDLKERAKHE SLRVLSELRRALCALGEDTGLGSLIFYLTLDEILTADWTQVDMLRAQAEQRKHHDTLC RDLAPNAVQLSLRDCEQLSSGGVKTLDEGTLGGICVAGSGRATGRVYRIADETAYGPE AFEGFEPGDIIVCRMVNPAWLPQVQQAGAVISVVGGWLSHMAIVAREKQILMLVGAQG LEALSHGDVITVTDRGEIEPESDSSEALRA" /EC_number="2.7.9.2" CDS 2185450..2186259 /locus_tag="Silicibacter_2007" /function="COG: ABC-type phosphate/phosphonate transport system, periplasmic component" /gene="phnD" /translation="MPKAYASVRSTAAHSPSGCGAVKRLATALVACVLLLVAAHPARA EIELVFGTYAADKPSATVRKYRPFLTFLENQMEILLEEDVTIGLKISKDYETSIDDLA IGRVDFARFGPASYVHATDRNPGISIIAMESKKGSKRFRGVIAVHKDSGIERVEDLAG LSFAFGDELSTIGRYLSQSYLLDAGITADQLHGYEYLGRHDLVGEAVGAGKFSAGALK ESTFKELVAKGVPIRALASFDNVTKPWLARAGLDERVLEAMKSVMLSSQNE" /product="Phosphonates-binding periplasmic protein precursor." /transl_table=11 /note=", 3A0109s03R: phosphonates-binding periplasmic protein" /note="Conserved hypothetical protein" CDS 2186260..2186355 /locus_tag="Silicibacter_2008" /translation="MMKRVAKNGFLAGSDEDYDFVRRAMIRSQGF" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 2186352..2188664 /locus_tag="Silicibacter_2009" /function="COG: Signal transduction histidine kinase" /gene="divJ" /transl_table=11 /note="[EC:2.7.3.-], Histidine kinase, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, cztS_silS_copS: heavy metal sensor kinase, product of gene has homology to DivJ, belas" /note="High confidence in function and specificity" /product="two-component hybrid sensor and regulator" /translation="MKAPLRKLLQSKGILSQIVVSMSLAALLVVVAVGGVARRYEVER VSEQLSEQANLTVSLLSGLMLEAIIVEDVPVLETGLVEAITRYPKILSINIENSEGEV IAEASNSAADEAEGYVMYRRPVEFEGFVFGTMVVQWSTAEGREIVLDKVRQTITWTVL AVIAMSLLMLYLVYRLALNPLQIVHARMSNAVAGAKTGHFSLPWYSSREFQALNVSVG VLEDSFAERDEREKALEHAREQAEIASRAKSEFLANMSHEIRTPMNGVIGMAEVLRET ELTPDQELYTETIVKSGNALLSIINDILSFSKIEAGKLELTQATFNLRTVIEDVIMLL APKAAEKWVQLTLRYDPDLAEFYDGDAGRIRQIVTNVVGNAVKFTSRGSVHIDVTGVA RGQLMDLRISVVDTGIGIPAEKLDRIFHAFEQVDGAATRNFEGTGLGLAISTRLLQMM KGRIHVTSSEGKGSVFTIDISLPTSDRAPVAFLPEQPVSGLHALIVDDLELNRRILGE RLRSWGLRVTEAASAMEAMLHLDEMRDATDTCDLIFLDYNMPDCDGYELALRIRGLPN TASVPIIVISSVDPALSQSMLADIEVCHQVLKPVRADDLRGVISQALGAGSAVEERAP SGSEDAKIMQRIKVLMAEDNRTNQVVVTRMLKSESVDIIIASNGQEAIEMYLRERPDV ILMDMMMPVMDGLDATKAIRKIENETGVRQVPIIALTANALQSHEEACLEVGMDDFLS KPIRKQALLDALHQWTEDRDSAEPQNKLEA" /EC_number="2.7.3.-" CDS complement(2188695..2189507) /locus_tag="Silicibacter_2010" /function="COG: ABC-type Mn2+/Zn2+ transport systems, permease components" /gene="znuB" /translation="MIFLDDFIIRAALAGIGVAFAAAPLGCFVVWRRMAYFGDATAHA SILGVALALTFDVSIFSGVLVTALLMASTISTLSGRGYAMDTLLGVMAHSALALGLVA VSFLQGVRVDLMAYLFGDILAVSRGDLAVIWSGAAMVLGLMWWRWSSLLIATLNPELA QASGVNPRREQLVLTLALALVVAVAIKVVGVLLIAAMLLIPAATARAFSSTPERMAVL AICIGCASVVGGIYVSFGADTPTGPTIVSTGTALFAAASIVALIGRSLRRQG" /product="zinc ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO0984 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2189504..2190271) /locus_tag="Silicibacter_2011" /function="COG: ABC-type sugar transport systems, ATPase components" /gene="znuC" /translation="MPGIAHMRLVSLRNATIRHSGTPALENVDFHIDRGEIVTILGPN GSGKSTLLRSIIGALPLSSGTVERAQDLRIGYVPQKLHIDPTLPLTVERFLSLPVRIS KTETENALAEAGVPGLRKRQMTGLSGGQMQRVLLARALLSKPDLLILDEATQGLDQPG SAAFYQKIASVRSQIGCAVLMVSHELHVVMAASDRVICLNGHVCCEGAPAQVASAPEY QALFGSGTHGALALYRHEHDHSHDCDHDHAKDEHEHA" /product="zinc ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0985 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2190259..2190729) /locus_tag="Silicibacter_2012" /function="COG: Fe2+/Zn2+ uptake regulation proteins" /gene="zur" /translation="MDSVGFTSHDHTRCISGGLESIETFCKDNRLQLTPVRRRVLEIL LQQHRALGAYEILDYLRDEGLGSQPPVAYRALDFLVKHGFVHKIERLNAFIACVHPGE THTPVFMICRSCDSVAEAQREPMQGQLGDAARAAGFTIERAVVEAEGLCPKCQE" /product="zinc uptake regulation protein" /transl_table=11 /note="identified by match to putative ortholog SPO0986 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2190829..2191965 /locus_tag="Silicibacter_2013" /function="COG: ABC-type Zn2+ transport system, periplasmic component/surface adhesin" /gene="znuA" /translation="MPRTVLSALFLSLSVVPALAETPRVVTDIAPVQGLVARVMDGVG APDVLVPPGASPHGHSLKPSDARALTSADAVFWIGDELSPWLLGSLKELAGDAHVVSL LAAPQTMRLEFREGVVFGGADHDDHGHDDHDHDAHEDHAHDGHGHEEHDHDDHKGHDD HGAHDHDDHAHDQDAHGHDEDAHDAHDHDSHETAHDDHGHGHDDHAHDGVDPHAWLAP ENGKQWLALVADELSEIDPANADTYQNNARAGQAEIDAIVAATKADLGEAHGQFVVFH DAYQYFEQSFGLRALGAIALGDASDPSVARIAEMRDAVAGQEVSCVFSEPQFNAGLVD TVADGLDIKAVVIDPLGTEIATGPSFYTDLLSEISAGFKTCLTH" /product="zinc ABC transporter, periplasmic zinc-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0987 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2192234..2193283 /locus_tag="Silicibacter_2014" /function="COG: Methionine synthase I (cobalamin-dependent), methyltransferase domain" /gene="metH" /transl_table=11 /note=", [EC:2.1.1.13] , Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate-- homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent) (MS)., Homocysteine S-methyltransferase, Homocysteine S-methyltransferase" /note="High confidence in function and specificity" /product="methionine synthase" /translation="MQNFNLPKSKAFEALSKTAQERILILDGAMGTQIQKLGLDEEAF RGHGGHSCAFHSNHPQQGNNDLLILTQPEAVEQIHYDFAMAGADIVETNTFSSTTIAQ ADYALEDAVHDLNAEGARVARRAMDRATAEDGKQRWVAGAVGPTNRTASISPDVNDPG YRAVTFDDLRVAYGQQIRGLIAGGADLILIETIFDTLNAKAAVFACFEAFAEHGERLP IMISGTITDASGRTLSGQTPTAFWHSVRHARPFTVGLNCALGADAMRPHLTELAGVAD TLVCAYPNAGLPNAFGQYDEEPEDTAAKVEIFAKEGLVNVVGGCCGTTPEHIRAIAEQ VAPYAPRRIREAANV" /EC_number="2.1.1.13" CDS 2193276..2196017 /locus_tag="Silicibacter_2015" /function="COG: Dihydropteroate synthase and related enzymes" /translation="MSEPLLRLSGLEPFVLTKDIPFVNVGERTNVTGSARFRKLITNR DYATALDVARDQVENGAQIIDINMDEGLIDSKQAMIDFLNLVAAEPDIARVPIMIDSS KWEVIEAGLQCVQGKPIVNSISLKEGEESFLHQASLCLAYGAAVVVMAFDEQGQADSF ERKIEICARAYKILTEQVGFPPEDIIFDPNVFAVATGIEEHDNYGVDFIEATRWIREN LPHCHVSGGVSNLSFSFRGNEPVREAMHAVFLYHAIKVGMDMGIVNAGQLAVYDQIDP ELREACEDVVLNRTPKAGGSATENLLDIAERFKGGTREEKKRDLTWRQWPVEKRLEHA LVNGITEFVEEDTEEARQAAERPLHVIEGPLMDGMNVVGDLFGAGKMFLPQVVKSARV MKQAVAVLLPYMEEEKRQNGGGGKDTAGTVLMATVKGDVHDIGKNIVGVVLACNNFEI IDLGVMVPPQKILEEARVHNVDVIGLSGLITPSLDEMVHLASELEREGFDIPLLIGGA TTSKVHTAVKIAPQYERNQAIYVTDASRAVGVVSSLLNDTQRDSYVADIQREYKEVAE RHERAERAKTRLPLTAARENAMQIDWSGYQVKAPEFTGARVVDDWDLAEIAQYIDWTP FFQTWELKGVYPRILEHEKYGEAARALFKDARAMLDRIITEQWFKPRAVVGFWPANRK GDDIRLFKDDTREEELATFFTLRQQTSKRKSSPNLALADFVAPEGVADWVGGFVVTTG PEEVEIAERFEKAGDDYSAIMVKALADRYAEAMAEMLHERVRRDYWGYAPTEAFAPEE LIGEPYRGIRPAPGYPAQPDHTEKLTLFELLDAEVATGVTLTESMAMWPGSSVSGIYI GHPEAYYFGVAKVEQDQVADYAKRKGLSQDEAERWLMPILNYHPGGRTGDQDEIAAQ" /product="Probable methionine synthase" /transl_table=11 /EC_number="2.1.1.13" /note=", Probable methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate-- homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent) (MS)., 5-methyltetrahydrofolate--homocysteine methyltransferase, Vitamin B12 dependent methionine synthase, activation domain, metH: 5-methyltetrahydrofolate--homocysteine methyltransferase" /note="High confidence in function and specificity" CDS 2196111..2196560 /locus_tag="Silicibacter_2016" /gene="yuxK" /translation="MRPPYSYRDDSNVPLFSDNTPIAVMDGECALCSWGARMIHRLDR SGRVRICPVQSPLGRALLKHYGLCAEDPTSWLYLDAGQAYMDFEGMIHAGRSFGGWGH LVVALRLLPRPVRNWLYRRLARNRYMLFGKGDICALPDPEFRKRLIE" /product="Hypothetical protein yuxK (ORF2)." /transl_table=11 /note=", Putative thiol-disulphide oxidoreductase DCC, Protein of unknown function, DUF393" /note="Conserved hypothetical protein" CDS 2196557..2198140 /locus_tag="Silicibacter_2017" /function="COG: Saccharopine dehydrogenase and related proteins" /translation="MRVLIVGGTGVFGARLAELLVRDGHDLTLAARNFRRAQRLASKL GCAALRLDRQGDLTGIAGFDVVVDAAGPFSTEGKDPYRLARAALKAGQHYLDLSDNAA FCAGIRSLDAEARAAGRAAISGLSTVPALSSAAVRALSAGARPEVIESAILPGNRSPR GLAVMRSILMQAGRPMRVWRGGAWETVSGWSQPKSYDLPQGLQRQAWQIEVPDQRLFP DHFGADSVAFRAGLELAVMRYGLAAFAYLRRLVPVPINGFVLGIFKLGADLLAPFGSG RGGMSVMVITNGERRFWRMLAEGGDGPYVPASAIRALLRRGEFPVGAQPALEVISLAE AEGAMGDLSVTTEVVSEPVQAIFPRVLGASFDDLPEVVRATHQTSDLSRWQGQASVRR GRSLWSRFLGWVFGFPAQAAHIDVEVVKTVSGDSEHWQRRFGGRLFHSVLTRTPAGMT ERFGPFTFLLGLRVSEGALHFPVRSARLGPLPLPRWLLPVSIAREHERDGGFCFDVKL LTPLTGDLLVHYQGQLAPA" /product="Hypothetical UPF0105 protein slr1223." /transl_table=11 /note="Conserved hypothetical protein" CDS complement(2198203..2199723) /locus_tag="Silicibacter_2018" /function="COG: NAD-dependent aldehyde dehydrogenases" /gene="aldB" /transl_table=11 /note=", [EC:1.2.1.3] , Aldehyde dehydrogenase, Aldehyde dehydrogenase family, BADH: betaine aldehyde dehydrogenase" /note="High confidence in function and specificity" /product="aldehyde dehydrogenase" /translation="MNEMTQVAGEYTSPFKARYDNFIGGKFVAPVKGQYFDNITPITG AKVCEVARSSAEDVELALDAAHAAKDSWGKTSPAERANTLLKIADRIEENLELIATAE TWDNGKPIRETMAADIPLSVDHFRYFAGVLRAQEGSMSEIDHDTVAYHFHEPLGVVGQ IIPWNFSVLMAAWKLAPALAAGNCIVLKPAEQTPAAIHVLIEVIADLLPAGVLNIVNG MGPEVGGPLAESDRIAKIAFTGSTETGRIIMKAATKNLIPVTLELGGKSPNIFFSDVM AQDDAFLDKAVEGFVLFAFNQGEVCTCPSRALIQEDIYEEFIERCIARVKAIKQGDPR DIETMVGAQASQEQQEKIMSYLTIGVEEGAEVLVGGDAARFNGDIANGFYVQPTILKG HNKMRVFQEEIFGPVVSVTTFKDEEEALAIANDTMYGLGAGVWTRDGTRAYRFGRNIE AGRVWVNNYHAYPAHAAFGGYKQSGIGRETHKMMLDHYQQTKNMLVSYNPNKLGFF" /EC_number="1.2.1.22" CDS complement(2199871..2200830) /locus_tag="Silicibacter_2019" /function="COG: Transcriptional activator of acetoin/glycerol metabolism" /gene="acoR" /translation="MSSLTRHIEHVLKTATHPGAAARSRLAASWRRSLNHHGLDPGQR RDVQRICARSLAERMEQADCMRRIALPKIDALFQLVGGSGCGVLLTDCDGVVLDLRAS DGDTDTFNAWGLAPGADWSEASEGTNGIGTCIAEARQVIIHREEHFHARNTAMSCMDA PIFGADGRLIGALDVSSARADQTASFNQLIAASVAQTARQIEADVFRAAFPEARIITA EAGTAEAAILLAVDGDDIVRGATRAARKVFNLSQTGPISPRPASDLLGSDDDSNGFDG AERAAVNRALSRTNGNVSEAARLLGIGRATLYRRMKRLGMRGE" /product="Acetoin catabolism regulatory protein." /transl_table=11 /note=", GAF, Bacterial regulatory protein, Fis family, HTH_fis: Helix-turn-helix domain, fis-type" /note="Conserved hypothetical protein" CDS 2200866..2201045 /locus_tag="Silicibacter_2021" /translation="MRVLGRLRFLQVGMRLGGRGAFFRPQTARSGLTFMQQGLNPEAF FAIAFGKPDDFAKGR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 2201049..2203445 /locus_tag="Silicibacter_2022" /function="COG: Phenylalanyl-tRNA synthetase beta subunit" /gene="pheT" /transl_table=11 /note="identified by match to putative ortholog SPO3489 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="phenylalanyl-tRNA synthetase, beta subunit" /translation="MKFTLSWLKEHLDTDASVEEITETLTDLGLEVEEVVNPADKLGA FTLAKVVGAEQHPDADRLRVCRVMTDEGEKQIVCGAPNAREGITVVLCKPGDYVPGLD FTLSVGKIRGVESHGMMASWKELTLGEDHDGIVELPSGEVGDKLVDWLAANDPAKVDP MIEIAITPNRPDALGVYGIARDLAARGLGTLKASDYKPVEGQFESPIKVTIDEDTLDG CPLFTGRVIRGVKNGPSPKWLQDRLTAIGLRPISALVDITNFFTFDQNRPLHVFDAAK VSGNLRVHRATGGEELLALDEKTYKMQAGQMVISDDNGPESIAGIMGGEETGCTDETV DVFLESAFWDHVQIATTGRALKINSDARYRFERGVDPEYTFEGLERATQMILDLCGGE ASDVVSAGDVPDHARSYRLNAERVQSLVGMDIPESEQRQTLTRLGFRLEGNMAHVPSW RPDVQGEADLVEEVARIASLTKLEGKPLPRLTAGIPAPVMTPQQRRLQMARRTAASLG YNEVVSYTFIDKAAAGLFGGGTDETMLANPISSEMSHLRPDLLPGLLQAAARNQARGF ADVSLFEVGPAFTGGEPGEERIQISGLLVNRNGPKDVHGASRNWDVFDAKADAEAILA AIGAPAKVQILRGGDAWWHPGRHGRICLGPKKTLGVFGELHPKTLSELGIKGTAVAFT IYPDEIPLPRKSGASRSALAISDLQAVERDFAFVLDSEVEALTVVNAAAGADKTLIED VRVFDEFIGGPLGDGKKSLAIAVRLQPADKTLTEKDIEAVSEKIVAKVSKATGGVLRG " /EC_number="6.1.1.20" CDS complement(2200827..2201081) /locus_tag="Silicibacter_2020" /translation="MFLEPGECEFHRSAPFGKVIRFAKGNGKECLRVQALLHKGQTTS RCLRPEKRPSTAKAHADLQKTQSSQNPHASLSSDVEGGET" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 2203684..2204133 /locus_tag="Silicibacter_2023" /translation="MALTVYLSGEIHTDWREQIIEGARDLDVQFSSPVTDHDASDDCG VAILGAEDSKFWHDHKGAKLNAIRTRKGIEDADIVVVRFGDKYKQWNAAFDAGYAAAL GKSIIVLSQPDHQHALKEVHAAALAVADEPRQVVEILTYVLTGKLPG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3492 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2204130..2204660 /locus_tag="Silicibacter_2024" /function="COG: Acetyltransferases, including N-acetylases of ribosomal proteins" /translation="MTAPVLETDRLILRRHELGDFDAVAQMWAEPEVVRFISGTPSTP EESWTRLMKYIGHWSMLGYGFWAVILRETGAYVGDVGFANFRRDMTPSLEGVPEAGWV LSPQVHGKGIATEAVACIHHWAETETLWDKTCCIFDPEHHVSQRVAQRLGYQASDQLG SYRGKPTLIMHRMMSR" /product="acetyltransferase, GNAT family" /transl_table=11 /note="identified by match to putative ortholog SPO2273 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2204612..2204716) /locus_tag="Silicibacter_2025" /translation="MEIIMTETAFGKPPPPVSAYRDIIRCIIKVGFPL" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 2204823..2205401 /locus_tag="Silicibacter_2026" /translation="MNLMPPPVPRINRRRSGPVTPEYEDSGLFKGGIIQVRLALVPVF GTTSRGDCTARGFNAAGTEVTAVFAGRRRPHFQAIYTQLRYMYAQAQQRDLLQGGKMR DVNDIQLPVQCEGAWRAVTTTDAHGVAHKNLQFMLARWAFQAHDGQTLKFGTAPVVAK TKISQGTSPAKAPRPYFEQGPLAQRQGAGSHE" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(2205410..2206216) /locus_tag="Silicibacter_2027" /function="COG: Small-conductance mechanosensitive channel" /translation="MEDIIEQAGAYWPLVVSGAKALVVLVLGWIAAGMISGAVRNRIN KTPQIDETLGSFVSSVVRWVLLAIVLVAVLGVFGIEATSLVAMLGAATLAIGLALQGT LSDLAAGFMLILFRPYKLGQFVDIGGTSGTVKDLNLFVTELVTPDNVQIIVPNGQAWG AIITNYSAHDTRRLDITYGIDYGDDIEKAKAIILRLAEADGRVLTSPEPWVRVTNLGD SSVDISTRLWCDAGDYWELKWTMIQGVKEAFDADGISIPYPHSVEIQKQA" /product="mechanosensitive ion channel family protein" /transl_table=11 /note="identified by match to putative ortholog SPO3496 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2207547..2208182 /locus_tag="Silicibacter_2029" /function="COG: Transcriptional regulators" /translation="MRLNFRWASDSHWVSSVPILPDPYMHLFKCAAFVGTMKTRLSKF LRLSTNFTQEKVSYLALDQVDRRILAVLQKQGRISNSDLSETVNLSASACHRRVQRLE SEGYIRNYVALLDARKLGVPTTVFVEITLQTQADEVLDAFEKAVARIPDVLECHLMAG TADYILKVVAENTDDFARIHRQHLTRLPGVAQMQSSFALRTVFKTTALPVG" /product="transcriptional regulator, AsnC family" /transl_table=11 /note="identified by match to putative ortholog SPO0223 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2206458..2207582) /locus_tag="Silicibacter_2028" /function="COG: Alanine dehydrogenase" /gene="ald" /transl_table=11 /note="identified by match to putative ortholog SPO0222 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="alanine dehydrogenase" /translation="MRIGCPTEIKPQEFRVGMTPDAAREAIAHGHQVMIQKGAGLGAG FPDEDYLAAGAAIIDTAEEIFADADMIVKVKEPQAVERKMLREGQLLFTYLHLAPDPE QTHDLLASGCTAIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAYTLQKANGGRGVLM GGVPGVAPAKVVVVGGGVVGTHAAKIAAGMGADVTVLDRSLPRLKYLDDVFGGTFKNR YSTAGATAELIRDADMVIGAVLIPGAAAPKLVSRADLSDMKPGAVLVDVAIDQGGCFE TSRATTHADPIYEVDGIMHYCVANMPGAVARTSTQALGNATLPFLLALADKGWRQACA DDPHLLNGLNVHAGKLTYYAVGRALGLDVLSPSLALREGT" /EC_number="1.4.1.1" CDS 2208389..2209306 /locus_tag="Silicibacter_2030" /function="COG: Uncharacterized conserved protein" /translation="MSSEQDNTSFEWLEAELQDTLDEDFEIEFAEPMLSMELRKIYRA QHPEMLDRKVYFRNLLRLQAELIKVQDWVQHTGAKVCILFEGRDSAGKGGVIKRITQR LNPRVARVVALPAPSRREQSQWYFQRYVPHLPAAGEIVLFDRSWYNRAGVERVMGFAT DDQVEQFFQDVPEFERMLVRSGIILLKYWFSITDEEQQLRFLMRIHDPMKQWKLSPMD LESRIRWEQYTKAKEDMFFRTNIDEAPWYIVEGNDKKRERLNCIEHLLTKIPYHDVPS EKVNLPDREYNPSYERRVLPDELYVPKIY" /product="polyphosphate kinase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0224 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2209492..2210163 /locus_tag="Silicibacter_2031" /function="COG: Phosphatidylglycerophosphate synthase" /gene="pgsA" /transl_table=11 /note="identified by match to putative ortholog SPO3635 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase" /translation="MIWNLPNILTVLRLLAAPALAVMFLFFSRPHADWFALVLFVGAA ITDWFDGYLARSWKQETKMGAMLDPIADKAMVVIALMILVGYSTSHWTAWLVLPATVI LFREVFVSGLREYLGDTAGSLKVTKLAKWKTTAQMIAIATLFSQGIFEHHLGMGGFGM DAQMVNDVLSGVIEDTQGLRFYFEGMIWSGRIGLWLLWIAAALTLITGFDYLKKALPY LKETR" /EC_number="2.7.8.5" CDS 2210163..2210408 /locus_tag="Silicibacter_2032" /gene="moaD" /translation="MDVLYFAWVRERIGLPKETVETSAVTVAELVEELKAREERYAAA FADLSALRVALDQELAEFDAPLEGVREVAFFPPMTGG" /product="molybdopterin converting factor, subunit 1" /transl_table=11 /note="identified by match to putative ortholog SPO3634 from Silicibacter pomeroyi DSS-3" /note="Specificity unclear" CDS 2210413..2210859 /locus_tag="Silicibacter_2033" /function="COG: Molybdopterin converting factor, large subunit" /translation="MRVVVQEAPFDFAAEAEAFAQGAKGAGAVVTFTGVVREADGGAM AVMEIEHYPGMTEKALANIASDAATRWELTDALVIHRHGRLAPGDQIMMVATAARHRV AAFEAAEYLMDYLKSRAPFWKKEILEDGSADWVEAKNSDESALSRW" /product="molybdopterin converting factor, subunit 2" /transl_table=11 /note="identified by match to putative ortholog SPO3633 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" tRNA complement(2210934..2211006) /locus_tag="Silicibacter_48" /gene="Silicibacter_48" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS complement(2211238..2212152) /locus_tag="Silicibacter_2034" /function="COG: Transcriptional regulator" /translation="MIGDEPIRIRQLQALNILAESGTMSLTAKAMNISQPAVSRLLSD LSKELGYPLFSRSGRRLTLTREAQYLLPEIQRIFGAMGQIRNLRQNIQDGTSGHLKIA CLPGFSTSHLPGVVADFLAARPKTTLTIEPDRPERILDWVIGEQYDCGITDGFRSHHA LDSKTIPIRCVCIFPEGHPLEAKSVIHPEDLAGERIAHDRFGSEFYLRLRDILDAEGI AMDNFIETRQFTCACELVSKGVCVSVVSELDAQEYIGKGVSFRPFSANITHQLSLVWP RHTPTSILTLEFLGLFEKSLEPYAMTET" /product="Regulatory protein nocR." /transl_table=11 /note=", LysR, substrate-binding, LysR substrate binding domain" /note="Conserved hypothetical protein" CDS 2212316..2212438 /locus_tag="Silicibacter_2035" /translation="MLRFDLPETDVRDLDLLCGALGPSAPVLLVANDNRRGISP" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 2212435..2213511 /locus_tag="Silicibacter_2036" /function="COG: Spermidine/putrescine-binding periplasmic protein" /translation="MTDKLAQFSRIAVVTTAMATLPMMAGAETLRLLTWGGYAPEDVI AKFEEETGHTVEVTTSNNEEMIAKLRATNGGGFDLAQPSQDRITSAQEEFGIYKPIDM SRINADLFIPSMLSATAANTTFEGEVYGVPHVWGTSGLVVNTEMAGNVQDYSDLCDDS VAGKVSYRLKRPTLIGFAYSMGLDPFAAYGDSAAYQGILDQVEAKLTECKANVKTYWD GGDEIKNLLRSGEVVASMAWDTGGWQLNADNPDITFVAPKSGALGWIDTFVLPARGRA DDAAYDWINFVMRPEIAAMITNTAGNFTAAVDGDAAVDADLKARYQSSFDQQAIDNIK WYPPVPAGLEAMEGASLDRINAAN" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Bacterial extracellular solute-binding protein, family 1" /note="Hypothetical protein" CDS 2213544..2214689 /locus_tag="Silicibacter_2037" /function="COG: ABC-type spermidine/putrescine transport systems, ATPase components" /gene="potA" /translation="MQGALSQSRGYNLTDSHPDLECRDLVKDFSDFRAVDRVSFEVPQ GSFFSILGPSGCGKTTLLRMISGFQSPSSGDLRIKGKSMIGVAPNKRPVSMVFQHLAL FPTMNIGDNVGFGLRQRGVGKAEIKTRVEQVLERVGLPGVSARRVDQLSGGQKQRVAI ARCMVLEPDVLLLDEPLGALDLKLREHMKVELKALQAEFNTTFVYITHDQSEALVMSD NIAVMNKGRFEQIGAPHEVYHHPSTAFVAGFVGDANKFDAKLKSKNGAMLTFETPTGA QMRVEAANSDLSEGQRAQIFLRPEAIALSPTTNEGDDAANVSPGVVETVLFNGANSTV SVRGAAGELLKVALPQTGDFATLQKGDKLFTRWRPMDARCFAAVEAG" /product="spermidine/putrescine transport system ATP-binding protein" /transl_table=11 /note=", ABC transporter related, ABC transporter, potA: polyamine ABC transporter, ATP-binding protein" /note="Hypothetical protein" CDS 2214686..2215555 /locus_tag="Silicibacter_2038" /function="COG: ABC-type spermidine/putrescine transport system, permease component I" /gene="potH" /translation="MMTSDASRLGFYLLLAPILLWLVVLIILPHVGLFLVSISEKVGP REYETGFGNYAAFFTEPLYWRTFARTAIMSILATALTLVLGFPIAYYIAKLTRGRTKT VLFLMCMIPFWVSELVRTFGWMILLRETGVFSNALQSLGLVSGPVEMLYNDAAIMVGL VYTSILFMVVPLVTTLDSLDDSLIEAGYDLGGTSTSIMREIVIPHAMPGIVSGCIVVF MLSLGNYLTPILLGGKDSLWFTGMIYTQFITRFNWELGSAFGFLLLALSSLVVFLGLK LSGQTLSKTMGRS" /product="Putrescine transport system permease protein potH." /transl_table=11 /note=", Binding-protein-dependent transport systems inner membrane component, Binding-protein-dependent transport system inner membrane component" /note="Conserved hypothetical protein" CDS 2215552..2216412 /locus_tag="Silicibacter_2039" /function="COG: ABC-type spermidine/putrescine transport system, permease component II" /translation="MIPTVPQPGFAKWCYRAYVTAFFIYLALPLTVVCVFAFNNSVFP SLPWEGFTLAWFFGNEAPFIGVFNERSILRSIGTSGFVALWVSGLAVAVGTCNAFLFV RHEFRGKALLYMLMLMPLIIPGVILGISILVFSSSAANALEDATGMWFDGLRPGLPLV ILGQFSFITTFATLVITARLQKFDPSLEEAALNLGASKWGAIRQITLPFLLPAIVASA VVSILMSFENFNTTLMLVGSDSPLTITMFDKLKQGSTPVLNAVSLLLIIISAVLGLLS LLFQKQKPGS" /product="Sulfate transport system permease protein cysW." /transl_table=11 /note=", Binding-protein-dependent transport systems inner membrane component" /note="Conserved hypothetical protein" CDS complement(2216485..2218035) /locus_tag="Silicibacter_2040" /function="COG: TRAP-type mannitol/chloroaromatic compound transport system, large permease component" /gene="gtrB" /translation="MTSSLDLIMFAALMAAILMGFPVAFSIAGIAVFFAYLGWMLGVM DISLLGAFGQRVFGLLSNEVLIAIPLFVLMGAILEKSRIAEELLDTMGRLFGQLKGGL GISVVLVGALLAASTGIVGATVVAMGMIALPAMLRAGYDPRVASGIVCTAGTLGQIIP PSTLLIILADVMSNAYQQVQYEQGKFAVEALSVGQFFAAALIPGLVLVVLYLLYILIR GLLRPEDMPSAPAGIARPHRTEVLRAVVPPILLIFAVLGAILGGVATPTEAASVGAIG ALLMAGLRTGGPLRSILLGAGALIALGILSGLHPVRLQRNDLSSMDLVIGLFYALLAA AGAIAVLLSLRAGLKKRILHDAVTSTATMTSMIFATMLAASMFSLVFIGLGGEDRVAH ILSELPGGPSGALLFSMLFIFVLGFFLDFVEISVIVLPLVTPTLILMGHDPVWLGILI AINLQTSFLTPPFGFSLFYLRGAAPKEITTRHIYQGVIPFIGLQVLGVILVWFIPGLA TWLPEAIF" /product="Hypothetical protein HI0147." /transl_table=11 /note=", TRAP C4-dicarboxylate transport system permease DctM subunit, TRAP C4-dicarboxylate transport (Dct) system permease DctM subunit, dctM: TRAP transporter, DctM subunit" /note="Conserved hypothetical protein" CDS complement(2218032..2218529) /locus_tag="Silicibacter_2041" /function="COG: TRAP-type mannitol/chloroaromatic compound transport system, small permease component" /translation="MIRVADALDGINRGLAHVIRWLALLMVLVQFAIVVGRYVFGVNS IAAQESVLYMHSALFMLAAGYTLLVDQHVRVDVFFAGLSPAGQRRVDVFGHLFLLMPS MTALLYWSWPSVRNSWSILEGPLAVGGIEAVFLLKSLIPAFCVLVMLQSLSLLIRLLF ESDRR" /product="putative membrane protein" /transl_table=11 /note=", Tripartite ATP-independent periplasmic transporter, DctQ component, Tripartite ATP-independent periplasmic transporters, DctQ component" /note="Hypothetical protein" CDS complement(2218597..2219682) /locus_tag="Silicibacter_2042" /function="COG: TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component" /gene="smoM" /translation="MQRRAFLKTGAMGAAATALASPAIAQGKMQWKLVTAWPKNLPGP GVAAQMLANRITTLSGGRIEVKLFAAGELVPGRGVFDAVSEGTAELYHAVPAYWGSKS KGILLFGSQPFGLRADEQFGWLYHGGGQALYDEMYGRFGIKPFLCGNSGPQWGGWFKT EINSAEDLKGLKFRTTGLASEMASKLGMAAEATSGPAMFQGLQTGALDAGEFIGPWTD SALGYYQVAKNYYWPGVGEPSSAEECGVNADVFAELPDDLKQVVSLACESLYNPVWTE YTTKHALALKKMVEEDGVQVKMFPSDVIEAMGTAAAEVISELREDEDELVRRITESFI SYRDSVGGYMTYADNGQMNARASVMGY" /product="extracellular solute-binding protein" /transl_table=11 /note=", TRAP dicarboxylate transporter- DctP subunit, Bacterial extracellular solute-binding protein, family 7" /note="Hypothetical protein" CDS 2219884..2220585 /locus_tag="Silicibacter_2043" /function="COG: Transcriptional regulators" /gene="hutC" /translation="MVEKRRHSWMEIRDSIRSMILNSTYGPGDKLPRDEEFALQFGCA RSTVHRAMRDLAQSGVVERKRRGGTTVRRDPVTRATLDIPITRLEVERRGSQYRHRLL RKSVQPTPPAIMANFDLSEPRNMLRVEALHLADNRPYIFEDRWICLETVPEIADVDLT RENANEWLVRNRPYSRCDLRLYARKATPSDQDVLQSHDGDALFVMERTTWIGAAPISS LCAVAHPGYQLFTQG" /product="Histidine utilization repressor." /transl_table=11 /note=", UbiC transcription regulator-associated, UbiC transcription regulator-associated, his_ut_repres: histidine utilization repressor" /note="Conserved hypothetical protein" CDS 2220595..2221260 /locus_tag="Silicibacter_2044" /function="COG: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases" /translation="MQIADWTAHFQGTRALPDATRTRLEQVSHAQTYKKGQEVFGPAN LPDSLLFLLKGTIRVSQSSDNGRDIVLYRVDAGESCVLTTACMLAEEAYNAEGIAETD VTVIQLPKSTFDQLVAEEPAFRSFVFAAYSRRLIDLLRVVDDVAFGRIDVRLADRLLT LAGADSEIAATHQQIASELGTAREVISRVLHDFQKREMISQSRGRITILNRVALRAMA ESV" /product="cyclic nucleotide-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO1615 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2221356..2221568 /locus_tag="Silicibacter_2045" /translation="MAMNVGTLDRILRAALALGLLYLALMSDLALFQSAIVRYGAIAV AVVMLVVAMTRVCPFYTIFGLKTCRR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 2221571..2222002 /locus_tag="Silicibacter_2046" /function="COG: Predicted transporter component" /translation="MQTDFTPVLSFGGGTLIGLAAVLLMLGLGRILGATGILSGTVFV TSREELSWRVALILGMLLAPGAIYFATGVMPAISVPSSPAMIVIGGVIVGFGASLGSG CTSGHGVCGLSRLSLRSIVAVPTFMATAAITVFLIRHVFGG" /product="YeeE/YedE family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1029 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2222007..2222435 /locus_tag="Silicibacter_2047" /function="COG: Predicted transporter component" /translation="MRFIYTVLTGLVFGVGIALSGMMNPAKVLNFFDIAGGWDPSLAF VMGGALTITFIGYRLVWRRQAPLFEGRFQIPSSTLIDSKLVGGAALFGVGWGIAGFCP GAAIPALGTGRWEVALFLLAVIGGFFLRRLLSNLPSNVTS" /product="YeeE/YedE family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1028 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2222462..2223346 /locus_tag="Silicibacter_2048" /function="COG: Zn-dependent hydrolases, including glyoxylases" /translation="MAHYPVNMDVKPEVQAFFDEATNTISYIVKDPASSACAIIDSVM DIDYAAGRITYEHADALIDHITSQGLQLEWIIETHVHADHLSAAPYIQEKLGGKIAIG AKIMVVQDTFGKIFNEGTEFQRDGSQFDRLLEDGDTYMIGSMQAFAMYTPGHTPACMV HVMGNAAFVGDTLFMPDGGSARADFPGGDAGTLYDSIQKVLALPDEMRLFMCHDYGPN GRDIAWETSVGDEKAHNIHVGGGISKEEFVKFRTQRDAQLDMPKLIIPSLQVNMRAGE VPTDKDGHPMLKVPLNGL" /product="metallo-beta-lactamase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1030 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2223416..2225182 /locus_tag="Silicibacter_2049" /function="COG: Sulfate permease and related transporters (MFS superfamily)" /gene="sulP" /translation="MPSFRQYFPILVWGRDYDKSALSNDLIAAVIVTIMLIPQSLAYA LLAGLPPEAGIYASIAPILLYAVFGTSRALAVGPVAVVSLLTASAVGQVAEQGTAGYV VATLTLAFLSGSFLVLMGVLKLGFIANFLSHPVIAGFITASGILIATSQIKHILGIRA EGHTLPEMLYSIALRLGEVNWITLLIGASATGFLFWARKHLKQTLHGMGTPPLLADIL NKAGPVAAVVTTTVVVWGFDLAEKGVKIVGEVPQGLPPLTMPGFAPDLIGALLVPAIL ISIIGFVESVSVAQTLAAKRRQRIDPDQELIGLGAANLGAAFTGGYPVTGGFARSVVN FDAGAETPAAGAFTAIGLALAAVALTPLVYYLPIATLAATIIVAVLSLVDLSILKKTW TYSHADFIAVAATILLTLGLGVEIGVASGVILSVVLHLYKTSRPHVAEVGLVPGTQHF RNIDRHNVQTDPRLVSLRVDESLYFVNARFLEDLIQKRVTEGCAIKHVVLMFSAVNMV DYSALESLEAINHRLKDMGVGLHLSEVKGPVMDRLQRSDFIDEMNGKIFLSQYEAWAN LTAGAQQGAADTGQGDQLRCGA" /product="sulfate permease" /transl_table=11 /note="identified by match to putative ortholog SPO1956 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2225419..2226222 /locus_tag="Silicibacter_2050" /function="COG: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase" /gene="thiD" /transl_table=11 /note="identified by match to putative ortholog SPO0045 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="phosphomethylpyrimidine kinase" /translation="MAHIALTIAGSDSGGGAGIQADLKAMSALGVYGASVVTAITAQN TRAVTAVHSIPLEVISAQIEAVLSDLDVRAIKIGMLATPGIIGCVHEALGAFSGEIVL DPVMIAKSGDALLAADAVDSLRKELVPGATVLTPNLPEAACLLDQPVAQSTDEMISQG LALCELGAQAVLMKGGHGAGEICEDILVSGGEVRACFRAQRQHTKNTHGTGCTLSSAI AAGLSKGLTLPEAVQEAHEYLQGAIAQADALAVGHGHGPVHHFHAFWSA" /EC_number="2.7.4.7" CDS 2226219..2227193 /locus_tag="Silicibacter_2051" /function="COG: Glycine/D-amino acid oxidases (deaminating)" /gene="thiO" /translation="MMLYSVIGAGVAGLAVATELVARGARVQVFDPAGPPGAHGCSWW AGGMLAPWCEYENAEEPVLRLGQEAIQWWQDRTQVTHRGTLVVAGRRDIPDLRRFARR TEGFRQIDHDITELEPDLVGFSQALFFEEEAHLDPRRALADLYQRLMQEGVVFHAECA PDNLENVIDCRGLQARDCLKDLRGVKGEMLVIRCPDVTLTRPVRLLHPRMPLYVVPRG DGLYMLGATMIESEDRARITARSMLELLSAAYALNPGFGEAEILEIGVDLRPAFPDNL PRIRRLKGRIYANGLYRHGYLLAPALARGVADLVLNNIHSEMVDEDHC" /product="Putative thiamine biosynthesis oxidoreductase thiO." /transl_table=11 /note=", FAD dependent oxidoreductase, FAD dependent oxidoreductase, thiamin_ThiO: glycine oxidase ThiO" /note="Conserved hypothetical protein" CDS 2227177..2227371 /locus_tag="Silicibacter_2052" /translation="MKITVNGAAVEVTATTLAALLEERGFSGRVATAVNETFVPATQR ATQPLSDGDRIEILAPMQGG" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", ThiS, thiamine-biosynthesis, ThiS family, thiS: thiamine biosynthesis protein ThiS" /note="Hypothetical protein" CDS 2227374..2228144 /locus_tag="Silicibacter_2053" /function="COG: Uncharacterized enzyme of thiazole biosynthesis" /gene="thiG" /translation="MKSFYGVELPNPLMLGTAQYPSPAVLEQAFRQSGAGVATVSLRR EGAGGAGASFWKLIADLGVHILPNTAGCHTIKEAVTTAHMAREVFDTNWIKLELIGHT DSLQPDVFQLVEAAKILTGEGFKVFPYTTEDLIVAERLLSAGCDVLMPWGAPIGSGRG LNNPYALRAMRAEFPEVPLVIDAGIGLPSHAAQAMEMGFDAVLLNTAVARAGDPPMMA RAMMAAIEAGQLAHAADPIEARDMAEASTPVIGKAFLS" /product="thiazole biosynthesis protein ThiG" /transl_table=11 /note="identified by match to putative ortholog SPO0047 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2228141..2228737 /locus_tag="Silicibacter_2054" /function="COG: Thiamine monophosphate synthase" /gene="thiE" /transl_table=11 /note="identified by match to putative ortholog SPO0048 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="thiamine-phosphate pyrophosphorylase" /translation="MTLDRFYPIFDDANWLQRMLPLGVKLVQLRIKDQPIDVVQQQIT RSRGLCRQHGAVLVVNDYWQLAIELGCDWVHLGQEDLDDADLKAIRAAGLKLGVSTHD EDELDRVLALSPEYVALGPVYPTILKHMKWHEQGLPRVREWKTRIGSIPLVGIGGMSV ERAPGVFEAGADIVSVVTDITLNSDPEARVRQWVEATR" /EC_number="2.5.1.3" CDS 2228716..2229690 /locus_tag="Silicibacter_2055" /function="COG: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2" /translation="MGRGHAMSRYARQMMLPEVGAVGQARLSTARVLVVGAGGLAAPV LPLLAGAGIGHITLIDGDVVSLSNLHRQTLFQETDCGRPKAEVAAQRCSALNSEIEIV AVAHALTPANAPLVLADVDLVLDCADSYAVSYLLSDLCHAQKTPLISASVLGSGGYVG GFCGGAPSLRAVFPDAPDNSASCETAGVYGPVVGMIGALQAQMALNILLEHVPSPLGQ MVQLDCRSYRSTTFRFDHAPEPEVSFPFVAIEELQADDHIIELRADAPLLHPKARRSD AEMLLQTLPNPQKRLVLCCATGLRAWRTAERIHPIWPGEIVLVAASAS" /product="thiamine biosynthesis protein ThiF" /transl_table=11 /note="identified by match to putative ortholog SPO0049 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2229711..2230646 /locus_tag="Silicibacter_2056" /function="COG: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components" /translation="MKTLIAALAMLAATPAMAQDRMTLLLDWFVNPDHGPIIIAEENG YFAEQGLEVEVVAPADPSAPPRLVAAGQADLAVSYQPQLHLQIHEGLPLKRVGTLVAT PLNCLLVLKDGPIQDLSDLAGKKIGFSVAGVEEAVLQAMLGQHGVSSDDIEMINVNFS LSPSLMSGQVDAVIGAFRNFELNQMEIEGVEGRCFYVEEEGVPSYDELIYVANPERMD TDKIARFLAATEKATQYIVNNPEKSWEIFAATSTELQDELNARAWVDTLPRFALRPAG FDAGRYTRFEAFLKDSGMIDSLNPVDAIAIDVTAP" /product="ABC transporter, periplasmic substrate-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0050 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2230643..2231320 /locus_tag="Silicibacter_2057" /function="COG: Putative transcription activator" /translation="MSEPYGKAFSLMRAEAEPAWRAYTHHAFVEGLKAGTLPREAFLH YLQQDYVFLIHFSRAWALAVVKSETHSEMLAAVGTVNALVAEEMQLHIGICEASGISQ EALFATRERAENLAYTRFVLEAGYSGDLLDLLAALAPCVMGYGEIGKRLTAEATSTLY GDWIDTYGGDDYQAACKAVGTLLDDALERRLGAEFTSSPRWSRLCQTFHTATELEVGF WQMGLTP" /product="TENA/THI-4 family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0051 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2231317..2232045 /locus_tag="Silicibacter_2058" /function="COG: ABC-type sugar transport systems, ATPase components" /translation="MSLAPSITIKGSASIDGTALFAPVSLTLDAGRWTCLLGGSGVGK STILRLVCGLPTGAEFHGTITASDGGALPSRVAYMAQDDLLLPWATIRENVQLGARLR AEPTDRLDLDEILARVGLSDHATKHPAELSGGQRQRAALARTLVEDKPVVLLDEPFSA LDAQTRALMQELAVEVLQDKTVLIVTHDPSEAARLGHQIAIMTPNKLMTCPPPATSVP RPVEALETLKCQAALMRLLRGQGA" /product="ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0052 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2232042..2232779 /locus_tag="Silicibacter_2059" /function="COG: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component" /translation="MKPWPVLAATVFALFLWQAIVSLTGLPKFILPGPVIVAQAWWDN LAVIAENTLVTAAEVLIGLVIGVALGVLTALHLATSRTARLLVQPILVFTQALPVFAL APILTLWLGFGLWSKIAMAVLIIYFPVTASFFDGLMRTPQGYLDLARTMQATPLRVLW HIRVPAALPSLASGIRLAAVYAPIGAVIGEWVGASRGLGYLMLLANGRAKTDLMFAAM LTLGVFSVLLHLVVRRLTRDLGRHVRS" /product="ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO0053 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2232887..2233426) /locus_tag="Silicibacter_2060" /function="COG: Uncharacterized conserved protein" /translation="MATKDIVLIALFAALIAALGVVPQITIPMAGGVPITAQSMGVML AGALLGAKRGGLAVVLFLVLVAVGLPLLSGGRGGAGVFFGASGGFLIGFPIGAFMIGF LFDRHTGQPGFVPSLIYVLIGGVGVIYLLGVPWLAQVAEISLSQALAGSLAFVPGDLI KAVLTVLIAREVRKAMPHL" /product="Hypothetical protein TP0228." /transl_table=11 /note=", BioY protein, BioY family" /note="Conserved hypothetical protein" CDS complement(2233466..2234056) /locus_tag="Silicibacter_2061" /function="COG: ABC-type cobalt transport system, permease component CbiQ and related transporters" /translation="MLDLYVDGRSVLHRLGPGWKILALAVSGTLLFAVDHILLTLGWL CLTLALYLVAGLPLSRAWQQIRPALWIFALIFLAQILFNSWQLGLFVVIRLAVLLMMA GLLTLTTRSSDMIDGIEAGLRPLQRLGLRTKGISLAISLTLRFIPVLTTVVQDVREAQ SARGLDRSLFAIAIPSIIRTLRMSEEISDAIDARGF" /product="putative cobalt transport protein" /transl_table=11 /note=", Cobalt transport protein, Cobalt transport protein" /note="Hypothetical protein" CDS complement(2234049..2234729) /locus_tag="Silicibacter_2062" /function="COG: ABC-type sugar transport systems, ATPase components" /translation="MIEVQDVSLTLDDRPILRDINLTLREKRIAIVGSNGSGKSSFVR LLNGLRLPSSGRVCVDGQDTRTEGRKLRRRVGFVFQNPDNQIVFPIVEEDVAFGLKNL GVPPKERDARVTAVLERYGLQEMRKQPAHTLSGGQKQLLAIAGVLVMEPEYVVLDEPT TLLDLRNTLRVSQAISALEQTAIMVTHDLDLIREFDRVIVFEQGRVFADDVPNAALER YVEAMRDA" /product="Sulfate/thiosulfate import ATP-binding protein cysA" /transl_table=11 /EC_number="3.6.3.25" /note=", Sulfate/thiosulfate import ATP-binding protein cysA (EC 3.6.3.25) (Sulfate-transporting ATPase)., ABC transporter related, ABC transporter, cbiO: cobalt transport protein ATP-binding subunit" /note="High confidence in function and specificity" CDS complement(2234840..2235931) /locus_tag="Silicibacter_2063" /function="COG: ABC-type sugar transport systems, ATPase components" /gene="modC" /transl_table=11 /note="identified by match to putative ortholog SPO0697 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="molybdate ABC transporter, ATP-binding protein" /translation="MSFDVDIALSQGQFRLDAQFSVPGGLTVLFGRSGSGKTTLINAV AGLIAPERGRIQIGQRVLYDSGRGVALPAHKRRLGYIFQDSRLFPHLSVQQNLLYAHR FLPRSSRTADPDRIVDLLGLGALLQRRPAQLSGGEKQRVAIGRALLAAPELLLADEPL TALDEARKLEILPYFERIRDELKVPVLYVSHAASEVARLASHVVVLDHGRVTQVGSAS GVLSDPAIVPTGVRNVGSVLTAELFLQHSDGLSELRINGLELFVPRIERPIGTVMRLR VAAHDIILSNTRPEGLSALNILPGTITAIRAGEGPGALVTLETAGGPMLARVTQRSVA TLDLKVGKAIYAIMKSVAIAPQDIGTDGL" /EC_number="3.6.3.29" CDS complement(2235928..2236635) /locus_tag="Silicibacter_2064" /function="COG: ABC-type molybdate transport system, permease component" /gene="modB" /translation="MSGQGMLGYGPDEIQAILLSVKVGFWAMTLSLPLGILTAYALAR WNFPGKSLLNGLVHLPLILPPVVTGYLLLLLFGPAGPMGRLLANFGISVAFKWTGAVL AAAIMGFPLLVRALRLSFELIDPKLERAASTLGASPFWVFCTVTLPLALPGVIAGMVL AFAKAIGEFGATITFVANIPGETQTLPSAIYAFLQVPGAETAAIRLVIISVLISFAAL LLSEALNRRLAKRLATT" /product="molybdate ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO0698 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2236632..2237456) /locus_tag="Silicibacter_2065" /function="COG: ABC-type molybdate transport system, periplasmic component" /gene="modA" /translation="MDDIVSPMSHQLWKCFMKSRQFRKWSLIALFVAALTSCFATASV AADPLRIFAAASLKTALDEIAQNFSELHDTEVSVSYAGSSALARQIGLGAPADAFISA NGAWMDVLEEQGHVRVDSRRDLLGNRLVVIAAKGAAPLSGLNALPEKLADGRLAMAQI NAVPAGLYGKAALEKAGVWPALTRHVAQTDNVRAALALVATGATPYGIVYLTDATADA RVSVVFNIPEDLHPPIVYPAAAVSDNGLSPVFLDHLQSTPAQSLFRSQGFVPMGAP" /product="molybdate ABC transporter, periplasmic molybdate-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0699 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2237879..2238139 /locus_tag="Silicibacter_2066" /function="COG: Predicted membrane protein" /translation="MSANEDSNAYWAANVRLILISLVIWALVSFGFGIILRPLLSGIS VGGTDLGFWFAQQGSILVFLALIFFYAWRMNQLDKEHGVDEE" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1811 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2238145..2239929 /locus_tag="Silicibacter_2067" /function="COG: Predicted symporter" /translation="MDQFTLNLLFVGASFALYIGIAIWARAGSTSEFYAAGRGVHPVT NGMATAADWMSAASFISMAGLIAFTGYDNSSFLMGWTGGYVLLALLLAPYLRKFGKFT VSEFIGDRFYSPTARLVAVICLLVASITYVIGQMQGVGIAFGRFLEIDAFWGLLIGAC VVFAYAVFGGMKGVTYTQVAQYCVLITAYTIPAVFISLQLTGNPIPALGLFGSTESGE PLLAKLNQIVTDLGFAEYTAAHGSTINMVLFTLSLMIGTAGLPHVIMRFFTVPRVSDA RWSAGWTLVFIALLYLTAPAVGAMARLNISELMWPNGTEAQAVSVEQIETDPEYAWMA TWQKTGLLGWEDKNGDGRIQYYNDANADLQAKAEANGWKGNELTNFNRDILVLANPEI ASLPGWVIGLVAAGGLAAALSTAAGLLLAISSAVSHDLLKGQLTPNMSEKSELLAARV SMAAAIVVAVLLGLNPPGFAAQTVALAFGLAAASIFPALMMGIFSTRINNSGAVAGML AGLVVTLLYIFLHKGWFFIPDTNSFTDADPLLGPIKSTSFGAIGALVNFAVAYVVTNM TKETPQHIKDLVESVRVPRGAGQAVDGH" /product="sodium/solute symporter family protein" /transl_table=11 /note="identified by match to putative ortholog SPO1810 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2240027..2241847 /locus_tag="Silicibacter_2068" /function="COG: Predicted signal-transduction protein containing cAMP-binding and CBS domains" /translation="MPLPAALTQFLASVHPYDSLPDPVLAHVAQQCALHNVAVDERLF SLGDTVSSLYIIVSGEIEITDEAGVQLSILGSRNSFGERALLRGERASRSARATSASE VIALPAEVFHQLIDQHESVARFFDRRRPPPRTGNSLASLTVEQLMTRAPVTCTPETPI RDAAALMHRHHISSICICDPDGFHGIVTLRDLNSKVIVGGIDPLEPISGIMTEDVLTL APQALVTDVLHLMVERNIHHVPIVNERGLLGIVTQTDLTRAQALSSADLVGRIARAED ASEMARATAQIPQLLVQLVEAGNRHEVITRLITDIADIATRRLLSLAEAQLGPPPVPY LWLACGSQGRQEQTGVSDQDNCLILSDDLTDAQMPYFAKLARFVSDGLDRCGYFYCPG DMMATNPRWCQPLRVWRGYFQTWIAKPDPEAQMLASVMFDLRPIGGDKSLFDHLQSDT LEAAAKNSIFTAHMISNSLKHQPPLGLLRGLATIRSGDHRDELDLKHNGVVPVVDLGR IYTLQGRLRPVNTRARLEAALAAGLLSASGGADLLDAYDLIASMRLELQTKQIKAGQA AGNYLNPSSLSDFERSHLRNAFVVVKTMQSAVGSGTGTLG" /product="nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO1809 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2241852..2242370 /locus_tag="Silicibacter_2069" /translation="MFVELIATIVAGIACAGLVMLLNILTGRRLPKWMMPVAAGLGMI GMTISNEYTWYARTTESLPKGLEVAMTVEEQGWLRPWTQIWPYTKRFVAVDVATARTH QDLPDQKLLDLYFFGRWSPVNQAPMLFDCAEARSALLIDGAEFGADGTVADADWRAMP KDDPILAKVCTA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1808 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2242373..2243812 /locus_tag="Silicibacter_2070" /function="COG: DNA polymerase III, alpha subunit (gram-positive type)" /translation="MLRSLSLRLRIFLFFCLLAVGAIALAAVALGFVWTRSDSEWTAS ELTTVILLFGFLNTGLVLGIWLLFDENVARPIEGLSTSLRLRAHSGIEDSIKAQAAQY LGDLAPAARALSDALAASGDQPPEQTQRLLQERERLTALLSEIPIATILVNAAGEIAL YDAQAGAILSRIAAPRLGAPLSNYFDLTPAIGACARADRRLVAGHVTVPDCNHAETFN LQIKSLGAEGDVIFLEADTRAERDTLSPPLVFDFDLLDQKLEGTITARRLSELNFVVF DTETTGLSVTKDAIVELAAARVLNGRILDGEVFETYVDPGRPIPAASTKIHGVRDADV AQSPRIEAVIPAFHDFAQSAVLVAHNAPFDIGLLRQQEVQTGCSWDHPVVDTVLLSAL VFGISADHSLDALCSRLSIEIPARHRHTAKGDARATAEALIRLLPLLQGKGIETFGQL LKETSKFGRLLRDINSDHVRNAPEMSDSP" /product="exonuclease, DNA polymerase III, epsilon subunit family" /transl_table=11 /note="identified by match to putative ortholog SPO1807 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2243821..2244768) /locus_tag="Silicibacter_2071" /function="COG: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)" /translation="MPINSDFPAPQRIKLNGITLEVFEAGSHNRGNPIVLCHGWPELA YSWRAQIPALVAAGYHVLAPNQRGFGASSRPADVTDYDITRLTGDLAALLEHFGYEAA TFVGHDWGANVVWSMALLHPERVVRLINLALPYQTRTPTPWIEFIEALFGADHYFVHF NRQFGVADAILDQNADQFLRNLFRKNLTMVPSEPGMMMINLARAETPLGDPLISAEDL EVFVSAFKASGFTPGINWYRNMDRNWHILAEIDPVIRHPALMIYGLQDPIPPSENLSE FVPNVAIRSLDCGHWIQQERPEETTQVMLEWLKAQDHAG" /product="Soluble epoxide hydrolase" /transl_table=11 /EC_number="3.3.2.3" /note=", Soluble epoxide hydrolase (SEH) (EC 3.3.2.3) (Epoxide hydratase) (Cytosolic epoxide hydrolase) (CEH)., Alpha/beta hydrolase fold, alpha/beta hydrolase fold" /note="High confidence in function and specificity" CDS 2244856..2245569 /locus_tag="Silicibacter_2072" /function="COG: Predicted transcriptional regulator" /translation="MKQRARQDAIVRTLRRRGSTTLAALGEEVDASRSTVLRDLSALR DAGYVIHAEQGRGGGVSLDPSSVQTTARLSVAEVFALIMGVASMRAAGVIPFSSLADS GVAKIEKALPPDKLRELRRMLDRLYVGPLASQVDISDLKEMVPELLPAFEAAFLGQRR LRFQYCDAKGAWTSREIEPQAMLVLPPLWYLVAWDPSRNDFRHFRADRISAPEVIETT RFRPRNVTFAAGVRPIRYA" /product="putative transcriptional regulator" /transl_table=11 /note="Hypothetical protein" CDS 2245703..2246803 /locus_tag="Silicibacter_2073" /function="COG: Zn-dependent alcohol dehydrogenases, class III" /translation="MQTIKAAVCHSFGSALEIEDVVLASPGPGEVEVTLDAVAICHSD ISFAEGAWGGPLPAVYGHEAAGRVSALGRDVDGFNIGDDVLVTLIRACRHCSACTSGQ PVYCATPYDGLQGPLSTPSGAPLYQAMACGAFAEKVVVSGSQIVAIPADMPKDVAALV SCGVITGVGGAVHSAKLRAGEDVVVIGAGGVGLNAIQGARIAGARRIVAVDLSAEKLD VARDFGATDTVLASDLKPWRAAIDALGGKGAEVVLITVGAIPAYAQAPRYLAPGGRAV MIGMPHSGDTAPYEPVVMAALGQGLQGSKMGDVVLQRDVPWIIDLYQQGRLKLDELIS GRWSLLQINEAIADTKTGSARRNVILFDHDHP" /product="oxidoreductase, zinc-binding dehydrogenase family" /transl_table=11 /note="identified by match to putative ortholog SPOA0430 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2246967..2248199 /locus_tag="Silicibacter_2074" /function="COG: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily" /translation="MKLQDLDIIITAPPAPGWGGRYWTLVKLTTDTGVVGWGECYAST VGPTAMRAVIEDVFARHMQGENPENIELMFRRAYSSGFTQRPDPTVIGAFSGLEIACW DILGKDRNRPVHALLGGRMNDRIRAYTYLYPLPDHDISAFWNSPEMAAESAEDAVNRG YTAVKFDPAGPYTMRGGHMPAMSDVSRSVAFCKAIREAVGDKADLLFGTHGQFTPAGA IRLGQALEPYSPLWYEEPTPPDSVGDMARVAKNVRIPVATGERLCTKAEFAAVLQAGA AEILQPALGRAGGIWEMKKTAAIAEVFGAQVAPHLYAGPVEWAANIHLAASLPNILMA ETIETAFHDRLIKGSIRVEEGFVTPPQSPGLGIEVDEELARQHPFKGDDLHLNMQETP CDYANGNAFEGGAPPIEG" /product="mandelate racemase/muconate lactonizing enzyme family protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0428 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2248405..2248719 /locus_tag="Silicibacter_2075" /function="COG: Predicted transcriptional regulators" /translation="MTVTLDRPANSMMGNASDAAALLKALAHEGRLMILCYLAAEGEL SVGALEELLGKRQAAVSQLLSRLREDRLVIARRDGKTVYYSLADGPATEVLETLHNIY CS" /product="transcriptional regulator, ArsR family" /transl_table=11 /note="identified by match to putative ortholog SPOA0427 from Silicibacter pomeroyi DSS-3" /note="Specificity unclear" CDS complement(2248756..2249604) /locus_tag="Silicibacter_2076" /function="COG: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)" /gene="hpcE" /transl_table=11 /note=", [EC:4.1.1.- 5.3.3.-], Fumarylacetoacetate (FAA) hydrolase, Fumarylacetoacetate (FAA) hydrolase family, HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit" /note="High confidence in function and specificity" /product="2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1, 7-dioatedecarboxylase" /translation="MKLFRYRTPEGVRPGLIDAQGVARDLSGHVADVTSETLGASVLE TLQSVDQSALPELTGPIDYAPCVGAIGKFLCIGLNYSDHAEEVGATPPEHPILFMKAN SAIVGANDDVRLPRGSKASDWEVELGVVIGKAAKYVSVEEALDHVAGYCIVNDVSERD YQLHLTGQWTKGKSCDTFGPIGPWLVTADEVSDPQDLALSCDVNGTRMQTGNTNKMIF SVAEVISHLSQLMTLHPGDIIATGTPPGVGMGQKPEPVYLKDGDVMELEIQGLGKQRQ VVRADD" /EC_number="5.3.3.-" CDS complement(2249664..2252795) /locus_tag="Silicibacter_2077" /function="COG: ABC-type multidrug transport system, ATPase and permease components" /translation="MLHHCLKRTNRATHVKTLLSSFDDRDLTLTLEPRSRPIERSLFQ FIWKYSKRDQLVLLVVTACLFPLLYLTLELPKRIINDAIGAQSSTIEVLGQQVDQLTY LWILCGAFLLAVLAHGLTKMRINTMKGVLAERMLRRFRYSLIARVLRFPQPYFERTSQ GELVSMITSESEPMGGLMGDAVSQPVLQAGQMLTILYFLFAQNFWFGLAAVALIPLQG WLIPLLQRRINLLNKKRIQQVRALASEIGESAAGASTLRVNGGWRYRMARVTDRLGRL YEIRFEIYQKKFFMKFLNNFITQLTPFFFYAVGGYLVLEGKVSLGALVAALAAYKDLA SPWKELLTYYNQTQDMSLRWEVILERFAPPDMVDERLMEGEPEELPHLDGDIVLKDVS VRDADGNLILEELSATFPKGELIGIAAPSEEDRRALAEVLTREVLPASGTVTLAGHDI RELHQMVLATRIGHATSRPALFKGSFGENVLMPLRVRPLEDPSDARAVRDAIRAGNSP DPFGVNWVDPKIAGFEKPEELRDWWLRIVEGIGSDTALLRRGMDQVFDREEHPKLAQA LIDLRPRVQRALMDAGLDAFARFNNPAHYNPALPVVENLLYATRSVPITYELLREQTE FLQTLRRIGLDKDLVALAQDVLEMLRQIFGMDGTVHPLFRKLGLEASDYEAALQLLQK VKSRGTEALEPEELAQMMIVPFSISAEALGPAFSSEIENRILSLRDSHGRELLETLDD LFVPLNKDRFAPGFTVLENAIFGKISDNAGARAEDLRKTVAEVIDAAGVREMVVELIF DLPVSVGGQGLGQSFAEPLAFCRASIKRPDILILDGALASFDRATRRAMQDNLRDLLP QSTLIFLEPAFKDPDRFDHYFEMRQGRLKDERAAERGAADEDSASAADLSRKLRALES TELFSGLNRRQLRLLAFSARWYEATPGTAVFHKDDAATDGAYMIIEGEAGLYLPAEDP GTKSQLIAKVGPGRLVGELGLIRKEPRALSMIAESDLTCLRIGEEEFLAVVENDANTA FKLLQVVAGYVSS" /product="ABC transporter, transmembrane ATP-binding protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0574 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2252950..2253339 /locus_tag="Silicibacter_2078" /translation="MPEHVGTVLLLICLFEVKHMFADFYLQTKKMLSGRCQYFHPGRA QHAGVHALASVVVLFVMGSPAWFIALICAVEWFIHFNIDFWKAHHTECNKLDPTQGAF WRAMGTDQLLHHLTYVGMTAAWAAVCL" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0573 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2253464..2254102) /locus_tag="Silicibacter_2079" /function="COG: Putative intracellular protease/amidase" /gene="ydeA" /translation="MFTLCSYSLQEIRIGQMPRLAVILTQGFADWEYGVLCGLGRAYF GLDVRFVTPVPGDVISMGGLVARVSDGFELLDSWEPDAVVVIGGTLWEHPDAPDLSGL LEGAQARGAVLAGICGGTLALARAGVLNTLRHTSNDASFLGLHAAGYAGAALYVDQPK AVRDGKVVTAAGTAPVSFAAEIMTALDVPLETVQQLKSMLGAEHIGTQARSV" /product="hypothetical protein" /transl_table=11 /note=", ThiJ/PfpI" /note="Hypothetical protein" CDS complement(2254154..2254612) /locus_tag="Silicibacter_2080" /function="COG: Transcriptional regulators" /translation="MRLDDRDRRILTLLQEDSRMSNADLAESVGMSASALWRRVRSLE EAGVIKRYGAVVVPQAMGLNFEALVQVNLTRHAPEHLQEFIRAVEGNPHVVECYATTG QADYHLRILAPDLEAYNQFLEQFLFQLAGVASAQTHVILKTVKRDTPVVP" /product="transcriptional regulator, AsnC family" /transl_table=11 /note="identified by match to putative ortholog SPO0569 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2254766..2258185 /locus_tag="Silicibacter_2081" /function="COG: Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits" /translation="MTELSHAFETYQLEDRYARTKGRVFLTGTQALARIMLDQARRDR AAGLNTAGFVSGYRGSPLGGVDLEFWRARARMEEAGITFMPAVNEDLGATAVLGAQQA VLDPDCEVEGVFSMWYGKGPGVDRSGDALKHGNAYGSSAKGGVLVVAGDDHGCVSSSM PHQSDVAFMSWFMPVLNPADVGEFLSFGEYGIALSRYSGTWVGFKAVSETVESGRSVE LPEDRDFIRPELPDYPGGLHIRSSDLPSPEIETRIRAKLQAVRAFAEANPIDRRIYDL PEARFGIVTTGKGYLDLMEALRLLDLNEDTCRRLGIDIYKVGMVWPLARAEALRFVKG KEEVLVIEEKRGIIESQFKEYFYDWPGDKPKKMVGKYHAAGEPLIPWVGELSPLMLVP VVAERLDRFFPELKLRDKARALTEQPPNLLNIPGATRTPYFCSGCPHNTSTKVPEGST ANSGIGCHVMASWMGRNTAGYAQMGGEGVPHVVASKYNGGKHVFQNLGEGTWYHSGSL AIRQAVASGANITFKVLYNDAVAMTGGQPVDGPVSVAGIAQAGRAEGVERIALISDDI AKFTRSDFPAGTSFHDRADLDLVQRELREIKGVTLLIYEQTCATEKRRRRKRGKMEDP KRFAYINDLVCEGCGDCSVESNCLSVEPKDTPFGRKRKINLSSCNKDFSCLNGFCPSF VTVEGATRRKRELKDLDPAALTVDLPAPDLPALGKPFDLLVTGVGGTGVVTVGALITM AAHLEGKGSSVLDFTGFAQKFGTVLSYIRLAKSPEEVHQVRTDLCAADAVIACDAVVS SAPKASAHYREGSRVALNLAEMPTGDIVLRRDASLDIPARARAVASVVGAGNVTALNA NAIAETLLGDAVLANVIMLGFSWQQGLVPVSLTALQQAIVLNGVAIEKNQLAFAIGRA MAAAPERLAAHYSETEATEESLQDLIKRRVSFLTAYQNEDYAGIYSDLLQRLHRALPA NHADRLTASAARSLFKLMAYKDEFEVARLMSGKSFRDELDRTFAGDFKVNYHLAPPLL NIKTDARGRPAKRAFGQWMTPVLSLLSKGKALRETPFNPFGYHSEARMHRELRDWFQN MLEDIISHPTALAPDMLDTTLKAPMDIRGYGPVREAAAQKVKQEVDALRLT" /product="pyruvate ferredoxin/flavodoxin oxidoreductase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0568 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2258282..2258956) /locus_tag="Silicibacter_2082" /function="COG: Transcriptional regulator" /translation="MPPKPVLHRDNPDAEPLIGNIKVTREDWLKMGLDVLIRDGEERV KVLALAEAMGVSRSSFYWYFKSRQDLLDALLTCWEETNTAGLIRQANAPAERITGAVL NVFRCIANPNLFDTALDFAIRDWARRSEPVRARMRAGDDARVAALTMMFARYGCAEME AITRAKVLYYMQLGYDMAEPEESYAYRLSMTPEYLKVFTGQTPTEAELREFEDYSRQF WRDVSP" /product="transcriptional regulator, TetR family" /transl_table=11 /note="identified by match to putative ortholog SPO0566 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2259347..2261119 /locus_tag="Silicibacter_2083" /function="COG: ATPase components of various ABC-type transport systems, contain duplicated ATPase" /gene="moaD" /translation="MRPLLSVENLSIGFGRDAPVVQNVNFEVNPGETLALVGESGSGK TISCRAVLRILPRTARLHSGRMILRGDQDELDLARISERQMRHDVRGNRIAMIFQEPM RSLSPLHRIGNQVVEIIHLHRSVSEEAAKREVLECFERVGFPDPERTWRSYPFELSGG MRQRAMIAMAMVAKPDLLIADEPTTALDVTTQAQVLGLMKDLQRETGMAMVLVTHDLG VVANMAEQVVVMHKGRVMEAGPAEPILRAPAHPYTKDLFEAAPKIPPAISPAPQEQQD LILELRNVTKTFTMRSGKSWSKPTLVRACDSVDLRLPRGKTLAIVGESGSGKTTAARI ALGAETVDAGGEVLFRHAAGAEALEVHDMDRDARRAFQRQAQMVFQDPYSSLSPRQRI FDTLAEPLEIHGIGARADHKARAAEMLRLVGLPGDMLSRYPHAFSGGQRQRLSIARAL MLDPALLVCDEPTSALDVSVQEQILTLLEEIRDARQLSYLFISHDLAVVARIADEVAV MRRGLIVEQGPPEVLFHNPKHPYTKALIAAQPVPDVDRPINLKLVAQGAGAPESWPEA FRFAGENAPPLVPLDPGHKVRCHV" /product="Hypothetical ABC transporter ATP-binding protein yliA." /transl_table=11 /note=", [KO:K02031 K02032], ABC transporter related, ABC transporter, CP_lyasePhnK: phosphonate C-P lyase system protein PhnK" /note="Conserved hypothetical protein" CDS 2263031..2264059 /locus_tag="Silicibacter_2084" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /translation="MEILRYALYRFGTMLLTLLLVSVLIFWIINLPPGDFLSNQIAEL RATGQEAGVAKAEFLRKEYALDRSLAEQYLIWMGFWPGPHGFSGMLQGNFGWSFEFDR PVAEIVGDSLWLTVLVNLAAVLFVYIVALPLGVLAAAKSRTMIDYTAAFIGYLGLATP NFLLALILFYYGHQYLNLPIGGLMAPEFEGEPMSWEKVKSILIHLIVPTFVIGTSGAS AMMQRLRANMLDELGKPYVETAVAKGMRPSRMLAKYPLRVAFNPFVADIGNLLPAMVS GSVLVSVVLGLQTIGPVLLQALKSQDMFLSGFVLMFVALLTLIGTMISDVLLVLLDPR IRYEGRKS" /product="oligopeptide ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO0559 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2264056..2265213 /locus_tag="Silicibacter_2085" /function="COG: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components" /translation="MSEKHPDGRFVDDAPYDPQASIRELERKDLDAPNWVLIWRKFKT HRLGLISGIFLLFCYVMLPFVGFIAPYGPNERNAEHLYSPPQSVNFFHEGEFLGPFIY PLTSEADLETFQWVVKPDYDNPQQIRFFCEGAEYRLAGLIPANTHLFCAPEGATLFLW GSDRLGRDIFSRILFGAQLSLTVGLIGITVSFVLGIFFGSVAGYFGGKIDWVINRAIE ILRSLPELPLWLALSAAVPSTWSPVAVFFIISIILGILDWPGLARSVRAKFLSLREEE YVRAAEMMGASSGRVIKKHLLPNFMSHLIASATLSIPAMILGETALSFLGLGLRAPAV SWGVMLNDAQNLANIEIYPWTAIPMLPIIVVVLAFNFLGDGLRDSLDPYQQ" /product="oligopeptide ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO0558 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2265210..2266565 /locus_tag="Silicibacter_2086" /function="COG: Predicted acyl-CoA transferases/carnitine dehydratase" /translation="MSMFDALPPLDAYHVVGEGQRPSVYAVSELANDCLGAVGLEMAK LIEVLGLAPGAPDVTVDQRLASLWFGYSFRPVGWEMPSLWDPIAGDYPCADGWIRLHT NLPHHRAAALSVLGCNADREGVAKAVLTWQGDALEAAVVGAGGVAAAMRSREEWLAHP QGAAVCQEPLVDWIKPRRVVLRARPEASAARPLMGVRVLDLTRVLAGPVSTRTLAGFG AEVLRIDPPDWDEPGVLQDISLGKRMARLNLRTEAGRAHLRALLAEADVLVHGFRPGA LDNLGLDLATRDAIAPNRIEVTLNAYGWTGPWANRRGFDSLVQMSAGIADAGRDWAGA QKPTPLPVQALDHATGYLMAAAVLSALSAAARQEPVGVARLSLARTAEALVAIPKRLS GPEISTAEPCDFATCEEASGWGAGLRLSPAVKINGCEMGWDMPAQPSGTHPPQWNEPQ T" /product="CaiB/BaiF family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0264 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2266638..2268992) /locus_tag="Silicibacter_2087" /function="COG: Small-conductance mechanosensitive channel" /translation="MSRLTALLRLWLIAATIGLLGSVPADAQSTLVSQGTSEEARSQS DLADAIRQAAEAGVGVVIVDSSGRALSGAEVVAQAGSAMEEEPGVMGGASSMMKAQSE LRDFRSKLNERLKSLPSSYIEMAYILRATSPDGRIITYVKVVLITTVLLLIGRWLSTE IYGKRLIKSYVVSRIEEKPEGYAGKMPFLFIRFAAGLGGTLFAMIFALIVTLLVFGPS GDVSIEFTSLAVYLTFFVARTISDLWRMVLSPYLSQYRIPSLSDRDAKRLYFWLSGLA TFDFVAVMVSTWVQDFGLNYNIYALTYSLLMLASSLLAILLVLFNARAISGAIRHVGD AHVVAWPNRLLSWVWAPIVILYIAFGWLALTFDLVLENPSALPPNMGLFAVLTSILVV YGLINYVIEQFTSRRRIIETTDDTTQSDDENSEDAQEKTTARHPIATYKDLARRAAGI LAFLVGAVSLIFIWNPEFAMEDAPWLDRAIDVLVILFIGYLVFHIARIWIDSKIEEET QDQPDGELGDEGGGSSASRLATLLPLFRGAILAVVVVTIILIVLMEIGINVSPLFAGA GVVGLAVGFGSQTLVRDIFSGAFFLIDDAFRRGEYIDIGSVKGTVEKISVRSFQLRHH LGALHTIPFGEIQVLTNYSRDWVIMKLPLRVTYDTDVEKVRKLIKTLGKELLNDPVIG HNFIQPLKSQGVIEMQDSAMIIRVKFMTKPGDQWLVRKKVFQEIRDLFEREGIKFAHR EVTVRVVDDTGEKVPEAKRDAALGAAQAAIEDDLMDSNDGGDDR" /product="mechanosensitive ion channel family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0557 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2269123..2269275) /locus_tag="Silicibacter_2088" /translation="MRFGHIPPQRALNAPVAICGATDFLMRIAGMDMAAGTRQNNNPT FETRVV" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 2269416..2270636 /locus_tag="Silicibacter_2089" /function="COG: Glycosyl transferases, related to UDP-glucuronosyltransferase" /translation="MSASPLPRFGPSDRGPRILFYSHDTFGLGHLRRSRALAAAITSA DPKASAMILTGSPVAGRFAFPNRVDHMRLPGVIKRADGSYASRTMGMSIEETTELRAG LIRSTAEQFAPDILVVDKEPTGFRGELIPTLDLLQERGQARLVLGLRDVLDEPEVLRA EWERKSALEAAETYYDEIWIYGLHDVYDPTAGLPLSKETQARMHWTGYLRRDLGEVGE PPEQPYVLITAGGGGDGAMMVDLAISAYERDPTLTPRAMLVYGPFLSGDTRAAFEDRV AALDGRVSAVGFESQIETLFAGAQGVICMGGYNTFCEVLSFDKPAVIVPRTTPRLEQW IRASRAEELGLVTMLDETRDGWTPEAMIGAIRALERQPNPSKAISDGLLDGLDYVTER VNALLQQLPREVSA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0555 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2270633..2271877 /locus_tag="Silicibacter_2090" /function="COG: Glycosyltransferase" /translation="MTGKRPALAVLVKGWPRLSETFIAQELVALEAAGQPFEIWSLRH PTDTKTHPLHDRLQAPVHYLPEYLYDAPARVAEARTRAQTLPGYAAAYEVWRADLRRD PTHNRIRRFGQACVLAAELPPEVRGLYAHFLHTPASVARYAAIMRGLPWSFSAHAKDI WTSPEWELREKLSAASHGAAFGATCTGFGAKHLQELSDGTPVDLIYHGLDLSRFPAPP ARVLRSPNAPFHMMSVGRLVEKKGFDRLIAALALLPRDLDWHWTHIGGGGLGDLLQGM AEDAGISARITWRGACDQPEVIDAMRAADLFVLPSRVASDGDRDGLPNVLMEAASQGL PILSTPVSAIPEFIESGTHGLLSSDAPEALADAMLRLAHAPEEAQRMAKAALLRLRAE FGMDPGIAQLNTRLNAMLKDAG" /product="glycosyl transferase, group 1 family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0554 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2271874..2272983 /locus_tag="Silicibacter_2091" /function="COG: Glycosyltransferase" /translation="MSASRIAFYAPMKAPTHPTPSGDRAMAQNLMELLQLGGAEVILA SELRLYDKLGDPAHQQLLQRRAADEVSRLVEELPPVDAWVTYHNYYKAPDLLGPAVAE ARGIPYVQIESTRAKKRLKGPWAAFAQAAHEAADQAAVIFYLTDQDRQTLERDRAGDQ QLVHLRPFLPQDVLPPARAESDDAGRTLLAAGMMRPGDKLASYALIAETLRHLEKTER ASDWQLLIAGDGPARTEVDALMAPFGDRVRFLGQLGPEAMIDAYRAADLFLWPGVNEA FGMVYVEAQSHGLPVVAQDRPGLRDVLLPGDYPAPDAGARALAARVVHLLADASERKD LGRRARDHIARHHLRPAASATLWAALKPLFREHSA" /product="glycosyltransferase, group 1" /transl_table=11 /note="identified by match to putative ortholog SPO0553 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2272980..2273564 /locus_tag="Silicibacter_2092" /function="COG: Fructose-2,6-bisphosphatase" /translation="MIRLALLRHGHTDWNRAGRIQGRSDITLDAAARQELAAHALPGT WKDADLWSSPLKRAAETAELVAGRAPQTAAALIEMNWGDWEGQQGALLRADPQSGFRD IEHWGWDYRPPGGESPAEVWARVAPWIATLTRDTVAVCHIGIMRMILARAHGWDFDGP APFQVKRNRLFVVEISGDQLDPWTEPVRLEKRAS" /product="phosphoglycerate mutase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0552 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2273561..2274700 /locus_tag="Silicibacter_2093" /function="COG: Predicted glycosyl transferase" /translation="MKVLIAVTHLLGTGHLSRALTLGRAFSRLGHAVTVISGGFPAPQ LSLESVQIEQLPPLRSDGVAFTRLLGEGGEVADEAYLARRVHQLETVVQAREPDVLIT ELYPFGRRALRAEFRALLEAAKALPRPPLILSSIRDILAPPSKPQKAVDADAMIERYY DGVLVHSDPKATRLEVSWPVSDMLAAKLHYTGYVAPPAAAPHPDGVGKGEILVSAGGG SVGDALYACAIEAAKEMPDYSWRILVGGADAAARIAELHDPSSPASLEPARSDFRAML PHAAASVSMCGYNTALDLLQSGTPAVLVPFDAGKEVEQTLRAKSLSPLPGFEVEAAAT LTPARLATALRRVMQDTQRSLDGFEFDGAGQSVEIAATLLRGQRA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0551 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2274721..2275479 /locus_tag="Silicibacter_2094" /translation="MTEGWDALDAELEQWAAAGLRLPLWWRDDDAVTPTDALTRLEAM ATRLDLPVHLAVIPKAAEDALAQHVSQSSHLIPVVHGWAHVNHANPDKKTCEFPSTRP VDEALTDAEQGVERLKHLFGARLQPMFVPPWNRISPAMLPWLAGLGFAAISTYGPRKR TQAASGLVQINTHIDPIDWKGGRGLMPEAQILQKLVANLQARRSGQQDNAEPLGLLTH HLVHTDEVWEFCDTLLRRLLEGPAHPWRFNERIN" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0550 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2275480..2275959 /locus_tag="Silicibacter_2095" /translation="MSRLDSMLRRLTAQRDGLNWAAQEISLLTGDVLDLGLGNGRTYD HLREVMPERRIWVIDRVLQCHPSCVPPEENFLQGEAAPMLDRLAEGGHKLALAHYDLG FGIKEKDVAEAAKLSPVIARVMVPGGVIVSGQPLVGFKEIDGPEGIPEGRYMFYRVE" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0549 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2276354..2277496) /locus_tag="Silicibacter_2096" /function="COG: Metal-dependent hydrolase involved in phosphonate metabolism" /gene="phnM" /translation="MTQEMILANATLILAGETRTGCVKISDSVIADIADGSSVPAGAV DLEGDFLSPGLVELHTDNLERHIEPRPGVDWPHAAALVAHDAELASTGITTVFDAMRV GSIPSGKGRYIKYARQLASEMLDLRTKDMLKISHFLHLRAEVCSETLAEELAEFTAED RVGLVSLMDHTPGQRQFRDIAKLEQYVKSKRGMSDEEFINHVAQLKDLRARFGDLHEA TTVAEAARFGAVLASHDDTTADQVQTSAGHGIRLAEFPTTVEAARACHAHGIKVMMGA PNLIRGGSHSGNVAARELADLELLDIVSSDYIPAALLQAAVKLGEIWGDLARGMATVT AAPAASVGLTDRGVLEVGKRADLIRFRTREGVPMLRAVYSRGARVA" /product="alkylphosphonate utilization protein PhnM" /transl_table=11 /note="identified by match to putative ortholog SPO0476 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2277549..2278232 /locus_tag="Silicibacter_2097" /translation="MTFTRYAIYYAPCADAAWSKWATSWLGWDIVAGREVAHPSAGAL DVTTITATPRKYGLHATLKPPMRLADGHDESALRGACEALAARLPPVQLEGLQVERLG RFLALRPIGDVGAPNALAAACVTELDGFRAPAPDAEIAKRRAGGLSAEQDAHLLQWGY PYVLDQFRFHITLTGKLPKRELPAVEAYLAEALVPLLPQPFVINDLALMGEAEDGRFH LIQRYALSA" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0475 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2278214..2278786) /locus_tag="Silicibacter_2098" /function="COG: ABC-type spermidine/putrescine transport systems, ATPase components" /gene="phnN" /translation="MSVPADTSPAKGPVIAVVGPSGVGKDSLMSGLAVADPRLRSMRR VITRAPEAGGEDYQPVSEAEFQALVEADVFALHWNAHGLRYGIPRDIEKLREGATGVL VNLSRAVLLQAQEVFDDFRVISVTARPEVLAARLAGRGREDAAEVERRLARASLALPE GLRQVHEVDNSGALSAAIVEAQAIIQAERA" /product="alkylphosphonate utilization protein PhnN" /transl_table=11 /note="identified by match to putative ortholog SPO0474 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2278783..2279613) /locus_tag="Silicibacter_2099" /function="COG: ATPase components of various ABC-type transport systems, contain duplicated ATPase" /gene="phnL" /translation="MIRNTPTRNFWSPPCCRCDQGLWRAHGICARRASLYLLERLAMT ASQTPMIDIQNVSKTFTLHNQGSALIPVMEGANLSVSPGECVGLVGASGAGKSTLMRL IYGNYLAASGHILIGGLDVANAEPREILELRRKTLGYVSQFLRVVPRVSTLDVVAEPL LSVGTPVEKARDRAASLLAQLNIPERLWTLSPTTFSGGEQQRVNIARGFAYDYPAMLL DEPTASLDAQNRATVLGLIESAKARGAAIIGIFHDEAAREQVCDRFVDVSAFAPKAAA " /product="alkylphosphonate utilization protein PhnL" /transl_table=11 /note="identified by match to putative ortholog SPO0473 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2280328..2281209) /locus_tag="Silicibacter_2100" /function="COG: Uncharacterized enzyme of phosphonate metabolism" /gene="phnJ" /translation="MSDYNFAYLDEQTKRMIRRAILKGLAIPGYQVPFASREMPMPYG WGTGGVQVSAAALTPDDTFKVIDQGADDTTNAVSIRKFFERTAGVATTEETEKASIIQ TRHRIPEADLREDQILVYQVPIPEPLRFLEPRETETRKMHALEEYGLMHVKLYEDISQ HGAIATSYAYPVKVEGRYVMDPSPIPKFDNPKMEMAAIQLFGAGREQRIYAVPPYTKV VSLDFEDYPFEATKAEHPCDLCAAEDSYLDEVIVDDQGGRMFVCSDTDYCRSRREAGH VGRLGQNAPLNTGPEAA" /product="alkylphosphonate utilization protein PhnJ" /transl_table=11 /note="identified by match to putative ortholog SPO0471 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2281324..2282427) /locus_tag="Silicibacter_2101" /function="COG: Uncharacterized enzyme of phosphonate metabolism" /gene="phnI" /translation="MYVAVKGGERAIDNAHAWLAEERRGDQSIAELSLAQIREQLKLA VNRVMAEGSLYDPDLAALAIKQSRGDLIEAIFLMRAYRTTLPRFGNSKPVETADMTCD RRISATFKDVPGGQVLGPTFDYTHRLLDFKLAAEGEVPEAPAAEPRLEPTPHVTSFLR GEDIIQTEEDSDATPKDITREPMSFPADRATRLQTLTRGDEGFVLGMAYSTQRGYARN HAFVGELRIGTVAVEMDIPELGFAIEIGEVELTECETVNQFKGSKTEPPQFTRGYGLV FGQTERKAISMALVDRALRWKELGEDDLGAAAQDEEFVLSHCDNIQATGFLEHIKLPH YVDFQSELELVRKLRREAEAARTEAEQAREAAE" /product="alkylphosphonate utilization protein PhnI" /transl_table=11 /note="identified by match to putative ortholog SPO0470 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2282432..2283007) /locus_tag="Silicibacter_2102" /function="COG: Uncharacterized enzyme of phosphonate metabolism" /gene="phnH" /translation="MPDTEIYTGGFADPAVASAHAFRAAMDVMARPGEIREITGGSAP EGLSQAAASLILTLADPETGLFLAPDVDSAALRGWITFHTGAPIVRAAKADFAVGGWD ALMPLEQYRIGTSEYPDRSATLIVESPAFEPPNAMLRGPGIKEHARMYLPDVALMQRN AMLYPLGVDVFFTSGSEIAALPRSTQIQPEG" /product="alkylphosphonate utilization protein PhnH" /transl_table=11 /note="identified by match to putative ortholog SPO0469 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2283007..2283459) /locus_tag="Silicibacter_2103" /function="COG: Uncharacterized enzyme of phosphonate metabolism" /gene="phnG" /translation="MTQERTPEDRKAWMSLLATAPEARLASLFEAFGHSPEHAFLRAP ETGGVMVRGRTGASGAPFNLGEMTVTRCTLKLVSGEVGHGYVQGRSKRQAEMAAKLDA MMQTEAAPELENKILTPLRTERDAAREARAAKAAATKVDFFTMVRGED" /product="alkylphosphonate utilization protein PhnG" /transl_table=11 /note="identified by match to putative ortholog SPO0468 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2283582..2284304 /locus_tag="Silicibacter_2104" /function="COG: Transcriptional regulators" /translation="MTKAASRTPVWKSIAITLTDDIAQGRYDRGAKLPAEAQLAERFG VNRHTVRRALADMSEQGLVHARRGAGVFVAAKPTDYPVGKRIRFHQNIRRAGRVPSKK VLRLETLAADAREADVLELEPGDPVVVYEGLSYADDHPVALARTLFPADRLPGIIDAL QSHDSITAALKACGVEDYTRRETRITAKLATATQALHLRTSEGAPILRTTGISDDLNG VPIEFGRTWFAGDRVTLTVGDD" /product="transcriptional regulator, GntR family" /transl_table=11 /note="identified by match to putative ortholog SPO0467 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2284354..2284968) /locus_tag="Silicibacter_2105" /function="COG: Acetyltransferase (isoleucine patch superfamily)" /translation="MPKLSASDPYAHPGCSLTNSTFGAWVEIGANTRVANSAFGDYSY CDRMCDIANAQIGKFANIASCVRIGATDHPMEKASLHHFLYRSASYWEDAEDDADWFA HRKSRRAEIGHDTWIGHGALIKPEVTIGHGAVVAAGTVVTKDVAPYTIVGGNTAKLIR RRYTEPVAERMIALAWWDWDHATLRAALADFRALPAEAFLEKYE" /product="chloramphenicol acetyltransferase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0784 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2285118..2286437) /locus_tag="Silicibacter_2106" /function="COG: ABC-type phosphate/phosphonate transport system, permease component" /gene="phnE" /translation="MTTLDLNTAPLKGQMDKLFFKKRLMNFGIPALILAYLTYVFFAF DVPGLWERASMDNARTLVSDTYSYKTHVTRDNRTGDVTYAVEGERKGEYPEGMSPEWV TPGATTVIDLTGGHVVRFGPETIEYDIPGYGLVTATPSRSQGVQAVLPEGEVPAWINL SKNRLAITTDAGRLTVTRNRAEVFRYFYGWELFFFTLDSPYHGMGPLELVGHAVSGEA GAIWNDFWTNKMWRHSDVAWAIGETILMAFLGTFGAGLVALPLAFLGTRNFMPVRIIR FATRRVFDFVRGVDSLIWTVVLARAFGPGPLTGALAILITDTGTFGKIFSEALENVDE KQIEGVASTGAKPVQRYRFGVIPQITPVLLSQLLYFLESNTRSATIIGAITGGGIGLL LTQAIITQKDWEEVSYYIVLIILMVMVMDWFSGWLRKRLIRGDEGGH" /product="phosphonate ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO0783 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2286441..2287319) /locus_tag="Silicibacter_2107" /function="COG: ABC-type phosphate/phosphonate transport system, permease component" /gene="phoE" /translation="MADLTAQAPGSVAEIKAQYADLTRRKRIYGGVLLALFIALMVAG FRTADDRNAGSFADGYQRIFDYPAEVLSEAVEKIAELPAHVVHFLPALIETLNIAGAS TLIGAIFGTLLSLLSTRGMAPWPALIPLFRRIMDICRAIPEIVIALVLIFLLGGGPVP AMIAIAIHTAGALGKLFSEVNENASLKPVEGLNSTGASWAQRMWLGVIPQVGPNYVSY ALLRFEINIRASAILGFVGAGGIGYELKNSMSWGQGKYDEAAAIFILLFVTIVVVDQI SGTLRDRLTHGNRKGA" /product="phosphonate ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO0782 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2287431..2288333) /locus_tag="Silicibacter_2108" /function="COG: ABC-type phosphate/phosphonate transport system, periplasmic component" /gene="phoD" /translation="MKHLILAALASTALTTPVLADDISEFRIGILGGENAQDRLNSNE CLRAKTEELLGVETKLFAPADYNGVIQGLLGGTIDMAWLGASGYAKTYLSDPEAVEPV LVKVNVDGGYGYYSVGFARKDSNINALEDVKGKVFGFGDPNSTSGYLIPSIEIPQATG STMQSGDYFGEVKFTGGHEQTIVAVANGDIDAGVTWADGLGNWEDGYNSGALRKAVDA GLVDMNDLVQIWQSKPIPEGPVVLRKALPEDVKVKMTALMASMPAMDYDCYYSVAAGD SKGFQPISHEAYEVIIEARKLKSN" /product="phosphonate ABC transporter, periplasmic phosphonate-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0781 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2288401..2289219) /locus_tag="Silicibacter_2109" /function="COG: ABC-type oligopeptide transport system, ATPase component" /gene="phoC" /translation="MLRINKLTKRFGDKTAVETATLDIDKPCMLGIIGRSGAGKSTLL RMINRLGDATEGSISFEGREITTLKGKDKRAWQSECAMIFQQFNLVPRMDVVSNVLHG TLNRRSTLATVFNLYPMADIHKAIEILDRLGIAEHAPKRAEALSGGQQQRVAIARALM QDPKIILADEPIASLDPMNAQTVMEALRRIHEEDGRTVIANLHTLDTARRYCDRVVGM RDGRIVFDGLPEQLTTGVAREIYGAGADFSEAATSTAIETLEQTDAVRTAEAYV" /product="phosphonate ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0780 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2289486..2290187 /locus_tag="Silicibacter_2110" /function="COG: Pentose-5-phosphate-3-epimerase" /gene="rpe" /transl_table=11 /note="identified by match to putative ortholog SPO0779 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="ribulose-phosphate 3-epimerase" /translation="MCQGTLLMSFDRSIKIAPSILSADFANFGQEIQAIEAQGADWVH VDVMDGHFVPNLTFGPAAVKAFRPHVKTVMDVHLMIAPVDPYIDAYADAGADVLTAHV EAGPHIHRTLQAIRAAGMKAGVALNPGTPAEAVAHLLDLTDLICVMTVNPGFGGQKFI DMTAKIRSLREMIGDRPVHIEIDGGVDPTTAPLVVEAGADVLVAGSAVFRGGSVEAPE VYGENIRKIRAAANA" /EC_number="5.1.3.1" CDS complement(2290285..2290413) /locus_tag="Silicibacter_2111" /translation="MIATARTTGGGKSTAHVMGELHDEAGQLLATATAIFRRITPR" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(2290414..2290704) /locus_tag="Silicibacter_2112" /function="COG: Uncharacterized protein, possibly involved in aromatic compounds catabolism" /translation="MTSDSEAQAVEVVSDPGCQQMVGYQTQFDAAGTCRVTLDLAARH LNRHRILHGGMVATLMDVACGHTAGRYFDPEGNASVVTVALNLSYIASTSAG" /product="conserved hypothetical protein TIGR00369" /transl_table=11 /note="identified by match to putative ortholog SPO0776 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2290802..2292034) /locus_tag="Silicibacter_2113" /function="COG: Uncharacterized conserved protein" /translation="MNGEKTILVAGTWDTKDDELSYLSEVIRGQGGQVLSMDVSVLGE PKLPTDVSKHDVAEAAGSSIQRAIDSGDENTAMQIMGAGSARLALDLWRAGRIHGVIV LGGTMGTDLALDLCAALPLGVPKYVVSTVAFSPLLPPERIPADLQMILWAGGLYGLND ICKASLSQAAGAVLGAARAVEAPSFERPMVGMTSFGKTVLRYMVTLKPELEKRGFDVA VFHATGMGGRAFESLAGEGAFAAVMDFAPQEVSNHLFGGLSAGEGRMTHAGHAGVPQL IAPGCYDLVDFVGWQGAPEQLRGRECHAHNRLLTSAMLDARERQRVAQEMCNKLARAS APVTVFLPRAGCNEWDRAGGDLHDAEGLRAFCDEMRRGVPENAQLQELDCHINDAEFT NAVLAQFDAWIKEGVIVR" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0356 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2292136..2293620) /locus_tag="Silicibacter_2114" /function="COG: NAD-dependent aldehyde dehydrogenases" /translation="MANQDLINTLRSTAVAPQSLFLEGTWQEGSGAPCETTSPIDGSV LTTLATATAKDVDRAVVSARRAFDDGRWSGLAPAARKKVLHRIADKIEAEALALTVLG VRDNGTEFNMALKAEAGSAAGTFRYYAEALDKVAGEVAPTAPDVLGLVHRAPVGVVGA IVPWNFPLMIGAWKLAPALAMGNSVVLKPAETASLSLLRLAEICADCGLPDGVLNVVT GPGAVTGAALSEHMDVDVMVFTGSGATGRRLLVASARSNLKRCYLELGGKSPNIVFAD AKDLDHVAKVSAMGIFRNSGQVCVAGSRLLVEASIHEEFVARVVAHAQALRVGDPLDM NTQIGAVNSETQLAANLAHVERAAAQGGEVLCGGGRILSETGGTYMAPTVVAGVTQDA DLFQKEVFGPVLSVTAFESEDEALRLANATDYGLAAGVWSQDLSRAHRCVAGIRAGVV HVNTYGGADNTVPLGGVGQSGNGHDKSLHALEKYVDLKTAWIQL" /product="aldehyde dehydrogenase family protein" /transl_table=11 /note="identified by match to putative ortholog SPOA0353 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2293485..2295104) /locus_tag="Silicibacter_2115" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MDLILSALEILMRWDVALALLAGSVGGVLIGAIPGVGPAVAIAI LLPATFSLDPIVGLTVLLGIYGSSMYGGAIPAILINTPGTAVNALTTYDGYPMTARGE PRRALSLAYSASFFGGIFSVICLILFAPVLAKVAPLFGAREIFLAALLGLILVVVAHR GQALIAGALACLGIFLNTIGMEPVKYTQRYTFGTDALGSGINLIVVVLGLFAISQAFI LLTDEDEKIRLTKLRGGVFQGLRELARHPRVASVSAGFGVVMGMIPGVGEFTAQFMSY TYAQKTSKRPQDFGNGSSEGLIAAETANNAVPAAAMVPLLALGIPGEALTAMMLSVFY VHNVVPGPGLFQNQMDFVVALYLALLILNVLVLVFLLAATKSLVQVVRIPNRFLGVGI LTLSFVGVYSLRNSVTDCFMAAGFGLFGFILKRLQLPAVPIILGMVLGGIMEVKLRAA MARVKTPFDFIDRPVAFILFSLILIVLAAHLFRIVKEARELKEAEWQTKTSSTRFGAL LLRRRASFLKEHGKKVRARHARLLRRLTDLF" /product="membrane protein" /transl_table=11 /note="identified by match to putative ortholog SPO0771 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2295132..2295734) /locus_tag="Silicibacter_2116" /translation="MARRIFRPATCLPHPDRFPSQRPFMQSERERRFIGPRRGQLLFV LSFLALAVMLLSQIGTQTAWVRKTDFFAQPRFWPAVGVGGMVVFTALHLWRLPFRRID RSDLREAQRWAAALEYMLWFMGYVVLVPLAGYLPVTLVFVPLLAWRMGYRSPQMMAIS AGFAVFIVLFFKGVLAVRIPGAALYEYLPDAWRSFAILYL" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0770 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2295766..2296710) /locus_tag="Silicibacter_2117" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MTMTTVLKGCVAAAGLALTAGAAAADYPEKPVNFIVPWPPGDLE DVLTRMIAEDFQEKYGVAAAVVNKPGGGGGPFPGAIEVANAPADGYTVGSFVIGVPVM GHQIDIPPLTPAKFDPLGIFLTYPFVIATSGDSPYSSMAELAEYAQDNEVVLGHFGDV LTPTQVTKAFAKSAGFEWGADAAFDALDCNTLASGDADVINTTLQLILPCLDDIKVLV SITDDRIPLVPDAPAIGELNPDLDIALWNGLFVTKDTPQDVRDKIIEVAQETVFSERA QAVAAETGALVYWQNADESAARVASDIETMARIGETLE" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0769 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2296926..2297705 /locus_tag="Silicibacter_2118" /function="COG: Transcriptional regulator" /translation="MGTVSKALTLLTYFNHGRLEIGLSDLTRLSGMNKATVYRLMSEL QEAGFVEQVEGARSYRLGPQVLRLAALREASVPILSASRRVLRELSEDTGETTHLSLL QGEQLASLSHAYSSRNATKVMMEDAEVLTFHGTASGLAVLAYSEPSFVDAVLAAPLTA RTPQTQTDPAAIRAEIAEVRRTGLAQSIGGFEAEVHSHAVPIFGPDRAVLGALAVAAP TSRMTPDQKRTIPPALRAAGLSLTERIGGACPPEFPTDIAA" /product="transcriptional regulator, IclR family" /transl_table=11 /note="identified by match to putative ortholog SPO0768 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2297735..2299102 /locus_tag="Silicibacter_2119" /function="COG: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase" /translation="MTAHQPDANFLKEHNARSLWHPMAHPGDSLANPPTIVTGASGVR IKDVDGHEVVDAVGGLWNVNLGFSCQPVKDAIAAQLDVLPYYSIFRGTTNDQVIQLAE ELRDFFAPDGLSRAFFTSGGSDSVETALRLARQYHKVRGEPARVKYLSLKKGYHGTHF GGASVNGNANFRTAYEPLLAGCHHIPAPYTYRNPFNETDPERLAQLCLAALEDEIAFQ GAGTIAAFIMEPILGAGGVIPPHESFMPGVAEICRRHGILLIADEVITAFGRTGSWSG SRHWGVQPDMMCTAKAITNGYFPFGALMLSERLVEVFEKDDTGKAAIGHGYTYSGHPV GAAAALACLAETKRLNVPENAAARGAQIFEGLQDLAARYDLIGDVRGGHGLMSALELV SDRATKAAVDKKVINRLQEVAYQNGAMVRVSGPNIILSPPLVLTEADAAQILSALDAG FAAVN" /product="aminotransferase, class III" /transl_table=11 /note="identified by match to putative ortholog SPOA0352 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2299252..2300172) /locus_tag="Silicibacter_2120" /function="COG: SAM-dependent methyltransferases" /translation="MRCGTSTCILSDRNARPDCLNEDTAHRHRAGQRWPALAFSCRAT PDWRDNQLRRNEQNMSETKLASHKMASDALPVVSQEIAATCLGVKVPQSSFLTETRIK RINAARYEGQEIAGALHVVCEEDRVLEVGAGLGIVGAVIAVNAKPQKVLSFEANPELV PVIHALHDMNDLGSQVELRNQVLFAGTDRPQTMAFHLRNSFLGSSLLNEAGRPSRVVE IPTVDAAEVIAEFKPTVLVMDIEGGELALLEALDLSAFRAIVIEFHPEAYEVKGMRRC KTILREAGFEKVDDVSTRTVWTCTRNIETS" /product="methyltransferase, FkbM family" /transl_table=11 /note="identified by match to putative ortholog SPO0767 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2300138..2301427) /locus_tag="Silicibacter_2121" /function="COG: Glutamine synthetase" /translation="MKTRLRALFCDHLSIMRGKYLPHSKIGDDETRFCRSVFGTHYDR DLLDAPGSMVKQGLPDMTLRWRHDDIRDSWHASTKIVLGDLYDDEGELLTLCPRGALK RAVADWQGKGLSPKIGIELEAFALQPDEYGRLVPYDAPGGVVYGTGPFADPLRFNDRI WAMADEMGFSLDMITAEFDSPQFEYTLTFDDAVKAVDDIVLFRLMAREIALEYGIVLT FMPKPVAQAGGSGMHVNLSFTDEAGGNALSSGPRGGPDHMNDLARGCLAGFLHHHKGL AGLIAPTANSYMRLQPGSLSGFWQNWGGDHRNVTTRISSEGGAKARLEHRMADASSNP YTTVAALLQAARLGVERGYALGPMETGDGFDRTDTRESTAMTLKGAVADLEKDTSLAE AVGPDLVANHVYMKQKEVRKTRDLEGDALRDFYVHFV" /product="glutamine synthetase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0765 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2302852..2303664 /locus_tag="Silicibacter_2123" /function="COG: GMP synthase - Glutamine amidotransferase domain" /translation="MAGLPLDCFTCILLRTVIMHMGSLNMRIAILMTNTDESAFAHRY PKDGEKFTALIQMARPEWHCDVYAVKDGVFPENIRCYDGAMITGSPASTRSGAHWVAQ LLDLIRQMHAMRLPLFGACFGHQAIALALGGRVDNLPGGWVHGRTENHLVARPEWASD LPDVVSIYGSHVEYVCTLPKGAQPLMSRADHTTGFMIGDHIATSQHHPEMTHAFICAL TEELRQKMGPEVYARAQESLAQEVDQPALAEAIARFFETASASRGRPADPSP" /product="glutamine amidotransferase, class I" /transl_table=11 /note="identified by match to putative ortholog SPO0763 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2301594..2302853) /locus_tag="Silicibacter_2122" /function="COG: Cytochrome P450" /translation="MTIWTPTDDGYADLSSHDAFANGAPHNTFARLRRDDPLHWTEYS DGENFWSVTRYDDITKMNKNTEIFSSARGIRMEDQTYEEYLARRTFQETDPPEHSQVR MKLLKAFSKTTMAQYEADIRDLCAEILDEALAKGSFDATKEIARQLPMRMLGRVVGLP DADLPWLVEKGDALIANTDPDFTSHVLDKMDTDEFRMMPFNSPAGAELYIYAKELMEA KERAGDTSGVLNMILQPARDGSVITETEFRNFFCLLVAAGNDTTRYSIAAGIQAMCHQ PELLAQMQAGGEIWETAADEIIRWATPALYFRRTATQDVEMHGKTIREGDKVLYWFAS ANRDDSYFDDPFRVNLMRNPNRHLSFGQFGPHVCLGMWLARLEVTVLFQELSKRIKSI EPNGAHKFLRSNFVGGIKELPVRVEAA" /product="cytochrome P450 family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0764 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2303630..2304280) /locus_tag="Silicibacter_2124" /function="COG: Transcriptional regulators" /translation="MAGQTETLIGAILADIDAGRLAPGQEIDEAALASHHGVSRTPIR EAYIQLEATGLIRRLPRKGAVLFKPTLEEFLAIQEVHAQLEGQAAGLAARRISPDLRA ELERITKDCADHASSKGDADPDGYYQLNLRFHETVALGAANPFLVEMIKTNARKLMAY YRARYRYPGAIAQSALEHREIAELILSHDRNGAEAAMRAHVQFDQVTVMDLLAALG" /product="transcriptional regulator, GntR family" /transl_table=11 /note="identified by match to putative ortholog SPO0762 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2304533..2305525 /locus_tag="Silicibacter_2125" /function="COG: Uncharacterized conserved protein" /gene="paaG" /translation="MYAQMVKSTGTGVKSTEEMSAEERAFQARIDAGEKIEPKDWMPE GYRKTLIRQIGQHAHSEIVGQLPEGNWITRAPTLERKAILLAKVQDEAGHGLYLYCAA ETLGVSRDEMTEMLLDGRMKYSSIFNYPTLTWADMGAVGWLVDGAAIMNQVPLQRTSF GPYSRAMIRVCKEESFHQRQGFDIMMKMAQGTPQQKAMAQDALNRFWYPALMMFGPSD KDSVHSAQSMAWKIKMNTNDELRQKFVDQTVPQAEYLGLTVPDENLKWNEEKGGYDFS EPDWEEFFEVIKGNGPCNTDRLAARNKAWDDGKWVREGMMAHAEKKRARKMAAE" /product="phenylacetic acid degradation protein PaaG" /transl_table=11 /note="identified by match to putative ortholog SPO0757 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2305598..2305882 /locus_tag="Silicibacter_2126" /function="COG: Uncharacterized enzyme of phenylacetate metabolism" /gene="paaH" /translation="MKTEWPLWEIFIRGQHGLSHRHVGSLHAPDAEMAIKNARDVYTR RNEGVSIWVVEAAQITASSPSEKGPLYEPSESKVYRHPSFYDIPEDVGAM" /product="phenylacetic acid degradation protein PaaH" /transl_table=11 /note="identified by match to putative ortholog SPO0756 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2305882..2306643 /locus_tag="Silicibacter_2127" /function="COG: Uncharacterized conserved protein" /gene="paaI" /translation="MSHDAAFYEFLLRMGDNTLILGHRVSEWCGHAPVLEEDIALANT ALDLIGQTQMWLGLAAEVQGEGKTADDLAFLRDAWDFRNLLLVEMPNGDFGQTLMRQF LFDAWHVLQLRALTGSSDERIAAIAAKAVKEATYHLERSAETVVGLGDGTEESHARMQ AALDYLYPYVGEMFLSDVVDAALVEAGIAPDPASLRADYDDTLARVLGEATLALPKAR RARGGGRDGKMHTEHLGHLLTTMQWMQRAYPGATW" /product="phenylacetic acid degradation protein PaaI" /transl_table=11 /note="identified by match to putative ortholog SPO0755 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2306771..2307247 /locus_tag="Silicibacter_2128" /function="COG: Predicted metal-sulfur cluster biosynthetic enzyme" /gene="paaJ" /translation="MTDTQSNQPALAQIWEWLDAVPDPEIPVISLVDLGIVRNVEWGD DRLIVTLTPTYSGCPATSVIRLDVETALAAHGIERVEIKTQIAPPWTTDWLSDKGRAR LEEYGIAPPSPAGGPDHCPRCGSPDVTRVSQFGSTPCKAHWRCTSCLEPFDYFKCI" /product="phenylacetic acid degradation protein PaaJ" /transl_table=11 /note="identified by match to putative ortholog SPO0754 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2307261..2308331 /locus_tag="Silicibacter_2129" /function="COG: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1" /gene="paaK" /translation="MARFHPLEVTDIKKTIRDAVVVTLKPLNGAAAEFDFTQGQYLTF RRDFDGTELRRSYSICAGKDEGILQVGIKRVDGGAFSTWANTVLKVGDTVEAMPPQGR FFTDLDAAAEKHYLGFAGGSGITPVLSILKTTLQAEPQSRFTLVYANKGINSIMFREE IEDLKNRYMGRLSVIHVLETDAQEVDLFTGLVTQEKCAELFERWIPIQSVDTAFICGP EPMMLGIAEALRTAGLSDEQIKFELFASNQPGRAAKKATSGDAAASAPVTAAITLDGA TRSVTLDRNTSVLEAALENAMDAPWSCRAGVCSTCRCRVIEGEVEMAANHALEDDEVA KGFVLSCQAYPLSDALVVSYDE" /product="phenylacetic acid degradation oxidoreductase PaaK" /transl_table=11 /note="identified by match to putative ortholog SPO0753 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2308476..2309339 /locus_tag="Silicibacter_2130" /function="COG: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase" /translation="MAVGKTIRTYFNGQWHDGDVPIMSAADHAAWLGSSIFDGARWFD GVSPDLDKHCARANASAEALMMAATVPADEMVEIVREGLKGFSPDSAVYIRPMYWATD GDQTLIAPAPEATQFAISLEEIPMAAESASATLTRTQFRRPVLESSVVNAKAGCLYPN NARMLREARAKGFTNTLTCDVMGNVAETATANIFMVKDGEVFTPIANGTFLAGITRAR HIENMRADGITVHEAVLSYAHFETADEVFMSGNMSKVTPVTAFDDVSYQHGPVTRRVR ELYWDWAKSGA" /product="aminotransferase, class IV" /transl_table=11 /note="identified by match to putative ortholog SPO0388 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2309318..2309476 /locus_tag="Silicibacter_2131" /translation="MGEIRGLKRRNLSPHPRPLAKYIHPVLKRCGSLGHRGVRVLLRG VVASANMT" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 2309497..2309952 /locus_tag="Silicibacter_2132" /function="COG: Universal stress protein UspA and related nucleotide-binding proteins" /translation="MRKFLVVLDDSRECLNAMRFAAMRAANTGGGVVILSVIPPDEFN HWIGVGEVMREEARERIHAHFEVFAKWMRDRQGVDPELVIREGDTVPEILAQIEADPE VGVLVLGAASDRKGPGPIVTQLTRTAGTLPFPITIVPGDMSKERLEAIT" /product="universal stress family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0386 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2310269..2310445) /locus_tag="Silicibacter_2133" /translation="MTRVLMCLGVAALLAACGADGEPVRPSLNAGLGISGSGVHVGGA IGVRKGPVSVSIGL" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(2310470..2311861) /locus_tag="Silicibacter_2134" /function="COG: Argininosuccinate lyase" /gene="argH" /transl_table=11 /note="identified by match to putative ortholog SPO0332 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="argininosuccinate lyase" /translation="MTDKTSNQMWGGRFAAGPDAIMEAINASIGFDQRMAAQDIAGSR AHAAMLAATGVITDNDAEAIREGLLTVLSEIESGSFQFSTALEDIHMNVEARLKEIIG EPAGRLHTGRSRNDQVATDFKLWVRDQFDAAEKGLLALIKALVDQAEAGADWVMPGFT HLQTAQPVTWGHHMMAYVEMFGRDLSRVRDARKRMNESPLGSAALAGTSFPIDREMTA KALGFDRPTANSLDAVSDRDFALEFLSVASICAMHLSRFAEELVIWSSAQFRFVTLSD RFSTGSSIMPQKKNPDAAELIRAKVGRIFGANTALMMVMKGLPLAYSKDMQEDKEQVF DAADNWMLALAAMEGMVKDMTGNRESLAAAAGSGFSTATDLADWMVRVLKVPFRDAHH VTGALVAMAEGRGVDLPDLSLEDMKSVHEGITEDIFTVLGVENSVNSRMSYGGTAPAQ VRAQVARWKEILG" /EC_number="4.3.2.1" CDS 2311882..2312445 /locus_tag="Silicibacter_2135" /function="COG: Thiol-disulfide isomerase and thioredoxins" /translation="MRIVRQLSLYMALALGANAAFGADLSAVEALREGDMKKLVFHTE AKPASDATFELADEAGQGHLSDYEGKYVLLNFWATWCPPCRKEMPMLSALQEEFGGDS FEVVTLATGRNNPAGIKKFFDEIGVTNLPRHQDPKSAVARDMTVLGLPITVILDPKGN EIARLRGEADWNSDSARAVIRALVAGS" /product="thiol:disulfide interchange protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0331 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2312613..2313452 /locus_tag="Silicibacter_2136" /function="COG: FOG: EAL domain" /translation="MKKRHFWKNDIPEGAENPLSAAIVARDRNVVDMVAEAVRHDQTL LAYQPVVQSRAPDAIAFYEGYIRVMDATGRIIPAREFMSVIEDRELGRKLDCLALEQG LRVLQRNPNIRLSINMSARSIGYSQWNKVLERFLERDQFLGERLVLEISEASAMATPE LVIDFMDQMQQHGIAFALDNFGAGTTAIGHFRDFFFDAVKIDGQYVRGVHASHDNQAV IKALIAIAKQFDMFIVAESVERQEDADFLIEAGVDCLQGFLYGAPTISPPWQNENDSR ARA" /product="EAL domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO0327 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2313982..2315157 /locus_tag="Silicibacter_2137" /function="COG: Acetyl-CoA acetyltransferase" /gene="phbA" /transl_table=11 /note="identified by match to putative ortholog SPO0326 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="acetyl-CoA acetyltransferase" /translation="MTNVVIASAARTAVGSFGGAFATTPAHDLGAAVLEAVVARAGID KSEVSETILGQVLTAAQGQNPARQAHINAGLPKESAAWGINQVCGSGLRAVALGAQHI QLGDASIVAAGGQENMTLSPHAANLRAGHKMGDMSYIDTMIRDGLWDAFNGYHMGQTA ENVAEQWQISRDMQDEFAVASQNKAEAAQKAGKFADEITPFVVKHRKGDITVDADEYI RHGATIEAMQKLRPAFTRDGSVTAANASGLNDGAAATLLMSADEAEKRGIEPLARIAS YATAGLDPSIMGVGPVFASRKALDKAGWSVDDLDLVEANEAFAAQACAVNKDMGWNPE IVNVNGGAIAIGHPIGASGCRVLNTLLFEMKRRGAKKGLATLCIGGGMGVAMCVERP" /EC_number="2.3.1.9" CDS 2315379..2316101 /locus_tag="Silicibacter_2138" /function="COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)" /gene="phbB" /transl_table=11 /note="identified by match to putative ortholog SPO0325 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="acetoacetyl-CoA reductase" /translation="MARIALVTGGSRGIGAAISKTLQAQGCQVAATYAGNDAAAAQFT EETGIKTYKWNVADYEDSKAGIAQVEADLGPIDIVVANAGITRDAPFHKMQPEQWQQV IDTNLTGVFNTVHPVWPGMRERGFGRVIVISSINGQKGQFAQVNYAATKAGDLGIIKS LAQEGAAKGITANAVCPGYIATEMVMAVPEKVRDAIIGQIPTGRLGEPEEIARCVAFL ASDDASFINGSTISANGGQFFV" /EC_number="1.1.1.36" CDS complement(2316163..2316261) /locus_tag="Silicibacter_2139" /translation="MDVFPPSRVVARHPDFPLGLSARELKPGTYGI" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(2316186..2316359) /locus_tag="Silicibacter_2140" /translation="MLRMIEYAATAEVKQGMARAHEARAQVLRDALTWMFSRRRASSH GIRISRWASARAS" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 2316463..2317401 /locus_tag="Silicibacter_2141" /function="COG: Transcriptional regulator" /translation="MSDRLPPLTALRAFDAAARHMSFAKAADELSVTPAALSFQIKSL EEHLGAPLFRRLNRAVELTEAGAALAPGVDEGFQALSAAWRQARRVLDTTSLTVTAGP ALTAKWLAPRLYEFARSHPDIDLRLSAGLKMVDLRRDHVDVAIRFGYSVDDYLVAQAA RPEWLTPVMTPELCAKYPTPQSLRDAPLIYDDSIGFLSPSCDWPTWFRAMGLEFTPGH GTHFSHADHAIDAACAGLGVALGRRPMIIKDVQEGRLVAPFKVAIETDAKFHFLCLPS SQDRPQIRAFREWFFSEIEKTAHMWDDFTIIPVKDL" /product="transcriptional regulator, LysR family" /transl_table=11 /note="identified by match to putative ortholog SPO0324 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2317408..2318319 /locus_tag="Silicibacter_2142" /function="COG: Permeases of the drug/metabolite transporter (DMT) superfamily" /translation="MTRPRATAVGFVAVLLWALLALLTFGSSPTPPLLLNTICFTIGG IIGLIWVQMTGSWAELRRVRLRVYAFGSIGVFGYHALYFSALRAAPAAEAGLIAYLWP LLIVLLSGLLPGERLRAGHFIGAVLGFAGAACIITGGGVGFQAQYLPGYGLALLCALF WSSYSVGSRLIGDAPTSSVAVFCLLSAVASGALHVLLEDTIWPANSLGWASALLLGLG PVGLAFYVWDIGVKQGDIQMLGTSSYAAPLLSTLILVLAGIAAPTWGLALATVLITAG AVLAARASAKAPAHTLVEGQTVTPPAG" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0323 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2318844..2319689) /locus_tag="Silicibacter_2143" /function="COG: Predicted O-methyltransferase" /translation="MISRMLGWSCATMICRCRTVAEPQSFAQDELSLDAFLGGQIKLL QPKSGYRAGVDPVLLAAAVNAKSGDSVLELGCGAGQAFLCLAARVSGLSIVGVELQPA YAELARRNAAVNAVPAEVVVADLSNLPATLRQRRFSHVIANPPYYRAGAHSQAKDPGR RTALGEGTPLELWFDVAARRLTPKGYLHMIQRVERLPDMIAAAQGRLGSLEVLPLSPR VGRATELVILRARKGGRAEFRLHAPLVMHQGDAHHRDGEDYSPAVRAVLREGSALPWP DIGRN" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0321 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2319904..2320914 /locus_tag="Silicibacter_2144" /function="COG: Geranylgeranyl pyrophosphate synthase" /gene="ddsA" /transl_table=11 /note="identified by match to putative ortholog SPO0319 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="decaprenyl diphosphate synthase" /translation="MNQVMTKTPQGKPHELLAETLAPELEAVNLLIRERMASQHAPRI PEVTAHLVEAGGKRLRPMLTLAAARMCGYEGEHHLKLAATVEFIHTATLLHDDVVDES AQRRGRPTANLLWDNKSSVLVGDYLFARSFQLMVDTGSLRVLDILANASATIAEGEVL QMTAATDLGTTEEIYLQVVRGKTAALFSAATEVGGVIAGASEAQVKALFDYGDALGIA FQIADDLLDYQGDTAKTGKNVGDDFRERKLTLPVIKAIAQAGDEERAFWHRTIAKGRQ EEGDLEHALSLMAKYATLEATRADAIGWADKAKSALADLPEHPIRTLLIDLADYVVSR LN" /EC_number="2.5.1.31" CDS complement(2320976..2321800) /locus_tag="Silicibacter_2145" /function="COG: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase" /gene="ispE" /transl_table=11 /note="identified by match to putative ortholog SPO0318 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="4-diphosphocytidyl-2C-methyl-D-erythritol kinase" /translation="MTITEVFAPAKVNLSLHVTGRRADGYHLLDSLVAFASIGDRLRL SPAEELSLSVSGLFADGVPEDSRNLVWRAAEGADWRGHIGLEKSLPHGAGIGGGSSDA GAVLNAFRSQGHTVPKALALSLGADVPVCMHASAARMQGIGEEITPIPLPKLPALLVN PGVEVPTGAVFSGLASRENDPMPSEVPRFDGVADCAGWLGAQRNDLEPAAIAAAPLIE RVLSDLRASRAALLARMSGSGSTCFAIYPTLKAAHFAAYEIGAEHPEWWCVATELS" /EC_number="2.7.1.148" CDS complement(2321787..2323505) /locus_tag="Silicibacter_2146" /function="COG: FOG: TPR repeat" /translation="MPVSYLRSLTCAAALLLTTGPMAVADGLAGAYLAGRAATYESDF AASAKYYTRALVRDPQNITLMENLVYAQLALGEVESALPVAERMWQAGVSSQVANIVM AGNLALQENYDALLARDSEQFEISPLVDGLLDAWAYMGKGAVSQALDQFDAVAQQDGL RFFALYHKALALASVGDYEGADQLFAANEGQLGRSSRRAAIARIQVLSQLGRNDQALE VLVDSFGEGFDPALTEFADQLAMGETLRFSITPTARDGMAEVFYSLGQALSGEAASDY VLMYARMAAKLSPGHVDAVLLSAGLLDQMGRYELSIATYKQVPRDHPDFHAAELGRAE ALRRSANPQAAAEVLEQLARDFPQHVAVYIDLGDLMRQQENYAEAAKAYTRALELSPD ETTNRWFLYYARGICNERLKNWEAAEADFRAALEIDPDQPQVLNYLGYSLVERQEKLD EALSMIERAVAARPESGYIIDSLGWVLYRMGRYDEAVGHMERAVELMPVDPVVNDHLG DVYWAVGRKLEAEFQWRRALSFVEPEDKDAEANPDRIRRKLDVGLDVVLAEEGAEPLQ VANDDH" /product="TPR domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO0317 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2323630..2325279) /locus_tag="Silicibacter_2147" /function="COG: Dehydrogenases (flavoproteins)" /translation="MAEIEREAMEYDVVIVGAGPAGLSAAIRLKQLDADLQVVVLEKG SEVGAHILSGAVLDPCGLDALMPDWKDKGAPLNVPVKDDNFYMLGEAGEIRIPNAPMP PLMNNHGNYIVSMGNVCRWMAEQAEELGVEIFPGMACSELVYGDNGEVKGVVAGVFGL EEDGSYGPNTEPGMELHGKYVFLSEGVRGSLSKEVIAKYGLSDGKEPQKYGVGMKEIW EIDPAKHKEGSVTHTMGWPLNSNAGGGSFIYHLDNNQVYVGFVVHLNYKNPHLYPYME FQRFKHHPMVAELLKGGKRVAYGARAITEGGYQSMPKLTFPGGALLGCSAGMVNVPRI KGNHNAMLSGKAAAEAAFEAIKAGRQSDELTGYEADVRDGPIGKDLKMVRNVKPMWSK WGLTASLALGGLDMWTNNLFGLSLFGTLGHGKNDAEATEPAENHKPIDYPKPDGVLSF DRLTNVSFAATNHEESQPCHLRLGNKDTPISVNLPKYDEPAQRYCPAGVYEVVEKDGK PEFVVNFQNCVHCKTCDIKDPSQNITWTTPQGGDGPNYPNM" /product="electrotransfer ubiquinone oxidoreductase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0316 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2325515..2325970) /locus_tag="Silicibacter_2148" /function="COG: Predicted transcriptional regulators" /gene="soxR" /translation="MPASHGLSIGYLAERTGLAVSAIRYYETQGLLEPWRNAGGQRRF HRADIRRLSFILIAQKFGFTLPEIREQLQSLPNKRPPTKEDWSRLSEGFRTHLDARIA MLEKLRDDLDGCIGCGCLSLPTCALYNADDRAAKNGQGPRYLMGDRPKT" /product="redox-sensitive transcriptional activator SoxR" /transl_table=11 /note="identified by match to putative ortholog SPO0314 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2326116..2326496 /locus_tag="Silicibacter_2149" /translation="MSATLEHANICVTDPHKTAAWMEKVFGWRIRWQGPAIGGGYSVH VGSDNSYLALYAPPEDLGEAPARYSAKGGLNHLAVVVADLDAAEQAVSDAGYTPRSHA NYEPGRRFYFEDEEGVEYELVQYD" /product="glyoxalase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0313 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2326809..2327279 /locus_tag="Silicibacter_2150" /function="COG: Transcription elongation factor" /gene="greA" /translation="MDKIPMTPQGFHALEAELKNLKSVERPAIIQAIAEARELGDLSE NAEYHSAREKQSFIEGRIKELEGVLSLADVIDPSKLSGAIKFGAKVTVVDEDTDEEKT WQIVGEHEANIEAGLLNVKSPIARALIGKEEGDSVEVRTPGGDRSYEILDITYG" /product="transcription elongation factor GreA" /transl_table=11 /note="identified by match to putative ortholog SPO0312 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2327316..2328347 /locus_tag="Silicibacter_2151" /translation="MTSERSPNEQTKAPRQSDLRLPELESGSRPSLGLAEAIALVLGV LWALVVVAVYVLAPDMALSTEWNAPLVRILAVMLPVLMLLVAAIALRSARIMREETER LHAAISSLRHMYLAHTQAAAVVSEPSVAKKLDEIAETARKTETVLATFQSSRATPTRL AIPSKAMEAVAEQGSFELGTSAEEISPPLSNDHFIRALNFPDSAEDEEGFVSLRLALK DRHAAQVIQAAQDVLTLLSQEGIYMDDLRPDRARPDVWRQFAHGARGRSVAALGGVRD RSSLALSSARMKQDPLFRESAHHFLRRFDQIFTRFEQDASDAEISALSDTRTARAFML LGRVAGTFD" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0311 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2328366..2328884 /locus_tag="Silicibacter_2152" /function="COG: Histone acetyltransferase HPA2 and related acetyltransferases" /translation="MNIALRPARPEDASSLAALSVEVWVGTYLRQGITAHFADYVLSE FTPARMEALIHAPDQNIIVSQNEDGIDGYIRVSHRCPDPLAGGHQTEVATLYVQPRHQ GKGLGRALLLAGLQAAHEAGATSIWLTTNSENAPAIAFYLAQGFERIGITQFRIEDQA YQNDVFARVLDH" /product="acetyltransferase, GNAT family" /transl_table=11 /note="identified by match to putative ortholog SPO2063 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2329115..2330374) /locus_tag="Silicibacter_2153" /function="COG: Molybdopterin biosynthesis enzyme" /gene="moeA" /translation="MTLTPPPLSNDCFALPQGVDWTPVDQALALLQERLGPVTSADTV SLSEALGRVLAEDAVALRSNPPQPNTAVDGYGFSGGRPEGAQVLPLQEGRAAAGVPYG GTVPQGHALRILTGAALPEGVDTVVLEEDVRTDGQSIAFNGPLKQGANTRKAGEDVNA GEVILRRGRVLTPADLALTSATGLNSLVVRQRLRVAVISTGDELVEPGQAARDGQIYD ANRPMLLALMQQFGFATVDMGRIQDDRAALAAALDQAAAQADVILTSGGASAGDEDHV SALLRESGAMQEWRIALKPGRPLALGMWQGTPVFGLPGNPVAALVCTLVFARPAMGLL AGAGWSEPQGFEVPAAFSKRKKPGRREYLRARMRSGCAEVFKSEGSGRISGLSWAEGL VELPDGAMDVAPGDPVRFIPFASFGMS" /product="molybdopterin biosynthesis protein MoeA" /transl_table=11 /note="identified by match to putative ortholog SPO0310 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2330371..2331183) /locus_tag="Silicibacter_2154" /translation="MLDWSGGNDTGPTPRRDAIWACVVRAGEAQAPVYLRNRQLASDW LKDLVDSELRAGRRLAIGFDFPFGYPQGFAAALTGEADPLVLWQWFADRIEDAPKLNN RFDLAGDINLRLQPGGQGEGPFWGNGLKRDIAGLPRRKTQYHNPFAERRQVEYRAKGS FTCWQMSGAGSVGGQVMMGLPVLQRLRREFAPHVSVWPFEPLETPVALLEIWPSLTVG ACPDGWIKDAWQVHSVALDLAGLPVADLNRYLTVTAPIALEEGWIFAVEPDR" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0309 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2331204..2331695) /locus_tag="Silicibacter_2155" /function="COG: Molybdopterin-guanine dinucleotide biosynthesis protein" /gene="mobB" /translation="MKIYGVTGWKNNGKTGLMERLVAEFTARGLTVSTLKHAHHSTDV DQPATDSYRHRAAGASEVVLASPNRVAIMQELRGADEPSLTALLARMRPVDLILVEGY KREPHPKIEAHRAEAGTALIAPDDPTIRAIASDTPLDLDRPVFDLDATPEIADFIAKE LGL" /product="molybdopterin-guanine dinucleotide biosynthesis protein B" /transl_table=11 /note="identified by match to putative ortholog SPO0308 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2331695..2332330) /locus_tag="Silicibacter_2156" /function="COG: Molybdopterin-guanine dinucleotide biosynthesis protein A" /gene="mobA" /translation="MIQPLGVILAGGLATRMGGGDKGLLSLGGQSLMARVIDRLSPQV RQMALNVNGDGARFDDFGLPVIPDSIDGFAGPLAGVLAGLDWAAEQGADTIVTVAADT PFFPTDLVEQLVAAADGQDTPLVLATTPKSGDEILKSGGKGRVNRHPTFGLWPVALRD DLRAALQDGLRKVVLWTDRHDGREALFDAEPFDPFFNVNTPEDLARAEALL" /product="molybdopterin-guanine dinucleotide biosynthesis protein A" /transl_table=11 /note="identified by match to putative ortholog SPO0307 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2332883..2333764) /locus_tag="Silicibacter_2157" /function="COG: Uncharacterized protein required for formate dehydrogenase activity" /gene="fdhD" /translation="MSKLNVSTEYRIAPDPGNPHLTRKVTGMDHLGHETEISVVEERP LTIYLNRQEIVTAMTIGDYPEYLALGFLKNQGMLSADDVVTRVDYDEEVETVVVRTEV ETSHEEKLQKKTRTSGCAVGTVFGDMMAGLEGVNLPQTPVKTSWLYKLAHEINRTPSL YLEAGAIHGTVLCQEDRPLVYMEDVGRHNAVDKIAGWMLSEGAAASDKILYTTGRLTS EMVIKTAMMGIPVLASRSGFTAWGVEIARQVGLTLIGRMRGQRFVCLAGEERLVRDVD PAAMPEEDRKHRRKSAD" /product="formate dehydrogenase accessory protein FdhD" /transl_table=11 /note="identified by match to putative ortholog SPO0306 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2333820..2334548 /locus_tag="Silicibacter_2158" /function="COG: Predicted branched-chain amino acid permease (azaleucine resistance)" /translation="MTISTAKSAFWKGVRDSAPFVLVTGPFGLLFGVLAAEAGLNVVE ALSFSLAVFAGSAQFTALQLMQEHTPTLIVLISALAVNLRVAMYSASLTPYLGDAPLW QRAFAAYLTVDQAYALSMIEFERRSDWGTPERMAYFFGTNGLVAPAWMAATITGALVG ASIPDSLGLDFVLPIAFLAMIGPMLRTPAHVIACFTACAVSLPATLMPYNLGLIVAGI AGMMAGAQAEVWFERKNTAAEAKQ" /product="AzlC family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0305 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2334545..2334889 /locus_tag="Silicibacter_2159" /translation="MTETEMAFDHGTLWLVIAGLAIGSYGLRFAFIGLVGNRTMPAWL MRHLRYTAVAIIPALVAPLVVWPAPTQGEPSLIHFAAAALTFVVAVFSKNVLLAMATG ACSLWTLMYVFG" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(2334911..2335003) /locus_tag="Silicibacter_2160" /translation="MKWHQGAVIAAPFVVLDWRFPSVLAALKQK" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(2335018..2335641) /locus_tag="Silicibacter_2161" /translation="MRTPILILALCAALAGCAAPQRPDADPETIASVAYRDAGKPSMT LITVVNNRTGEGGHTALMVNASERVIFDPAGSFYADIVPERQDVLFGISPRIFQAYRS AHARSTFHVVTQEVPLTPEQAQIAYQLVTTNGRVAGAFCANATSSILQQIPGFESIDV TFYPVKLQEQMAQFPGVVTDKYYEDDSEDLKAGLAQGNAALNAPAGG" /product="lipoprotein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0304 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2335671..2335805) /locus_tag="Silicibacter_2162" /translation="MAEHKHGSMDITVQEKTYASFMTFVTRFTIGLVIFAVFLAIFAT " /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" tRNA complement(2335990..2336063) /locus_tag="Silicibacter_50" /gene="Silicibacter_50" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS complement(2336108..2337064) /locus_tag="Silicibacter_2163" /function="COG: Permeases of the drug/metabolite transporter (DMT) superfamily" /translation="MNMKAAFMALLAYGIFSTHDVVVKFISAEVSAFQIVFFSSLLSF PLLTLMIVKDATPGTFRPNQPGWVALRSLMMALIPGCAFYAFSVLPLAQTYALLFATP FLITLLSIPMLGEKVGLPRMAAVIVGFAGVLVVLRPGGTELGLGHVAALLAAFGNAFQ SVILRKLRHTERRVVLMLFPILTTVVIMGLTMPFVYVPLSGTQMGGLAIISVFGFCAT LLLVFSYSIGESAVVAPMQYSQIIWAIVFGALLFDETVDLLTILGAGIIIASGVFIVM REARGGRSSTTPVLQSRSRPMLSSGFGLSNLAKAKFDEKGSE" /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPOA0349 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2337238..2338341) /locus_tag="Silicibacter_2164" /function="COG: Isocitrate/isopropylmalate dehydrogenase" /gene="leuB" /transl_table=11 /note="identified by match to putative ortholog SPO0210 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="3-isopropylmalate dehydrogenase" /translation="MSNPSILILPGDGIGPEVMAEVRKVISWFGAKRDIQFDVSEDLV GGSAYDAHGTPLHDDTMAKAQEVDAVLLGAVGGPKYDALDFSVKPERGLLRLRKEMDL YSNLRPAQCFDALADFSSLKKDVVAGLDIMIVRELTSGIYFGEPRGIIEEGNERVGIN TQRYTESEIERVARSAFELAMRRGKKLCSMEKANVMESGILWREVVTEVSKDYPEVEL SHMYADAGAMQLCRWPKQFDVIVTDNLFGDLLSDAAAMLTGSLGMLPSASLGAPMANG RPKALYEPVHGSAPDIAGQGKANPIACILSFAMALRYSFDMGTEADRLEAAVEKVLAD GVRTADLLGEEGVTPVSTSEMGDAVVEALNASL" /EC_number="1.1.1.85" CDS complement(2338437..2339462) /locus_tag="Silicibacter_2165" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MSARAAFALLLCHLFWTSASDAGPQSGTLRVATFNTELSRKGPG LLLRDLRRGDDQIRAVVGTIVEAGADILALQGVDWDYDLYSLRALQHRLKGAGQDYPY AFAVRPNSGLASGLDLDGDGRLAEPEDSWGWGQFTGQGGIALLSKHPIAASKAVNLTD MLWKDLPGHRMPVTLDGTLYPDAETAARLRLSSTNHWAVPVTLENGQFLWILSFHAAP PVFDGAEDRNGRRNADEILIWTYLLDGTLDAQIPDPFVLMGDANNDPERGEGQNDAIT RLLHHPRLQDVTPSDEAGQHSVIWDSTGPMRVDYVLPSAGLSVAGSGILRSNGSRHGL IWVDIRR" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0213 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2339459..2340289) /locus_tag="Silicibacter_2166" /translation="MLARITSAAIRGLLVALLIVLPSLLLPVAATQSPEIVAFTALLA GGLIFAEYFSNFPSFLEFRDAPPLNRSRFFFVSLCMILLSLLAGHPFQPTGFSALVHK FAFLVGDALDFAYSPVHLARLMMPEHVPQYTVDLVRAAAGLAYLLSLISIAYFAFVIR LRNWPLSSGAFNVWVNLPLFDPTTGGDVVTRLQRDAKLHIVAGVLLPFLLPALVQMTA SVFDPALLGSPQLLIWCVTGWAMVPASLITRGMARLRVADLIEQKRRSFNHDKDLQVV " /product="membrane protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0214 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2340764..2341489 /locus_tag="Silicibacter_2167" /function="COG: ABC-type sugar transport systems, permease components" /translation="MQKAEILQSMGEAISLALALVMSGDADLFEIVGLSLRVSLSATV FACLIGLPIGALVAISRFPGRGACLVLMNALMGLPPVVVGLLVYLHLSRSGPLGFLGL LYTPTAMIIAQTILIAPIVAALSRQVIEDLHAEYAEQFRSLCLSRAQAVAALLWDARY SLLTVGLAGFGRAVAEVGAVIIVGGNIDHLTRVMTTAIALETSKGDLALALALGVVLL VIALGVNAAVQGLRMSARRQAYV" /product="sulfate/tungstate uptake family ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO1789 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2341482..2342240 /locus_tag="Silicibacter_2168" /function="COG: ABC-type spermidine/putrescine transport systems, ATPase components" /translation="MSSIDTLSFTSDARRVLEDPNLMPLRVRGLVLQCGDTTILQDLD LDLAPQGCTAIMGPNGAGKSMLLKLLHGLIEPSTGDITWGGTVPSAVTARQAMVFQKP VLLRRSVAANVDFVLKTRRKSGTTRDALLAHVGLLHKARDPARRLSGGEAQRLALARA LACEPEVLFLDEATASLDPASVKAIEDLILDASAKGIRIIFVTHDIGQAKRLADDVVF LQGGRVAEHSPARSFFSDPQSSAARDYLNGRLVF" /product="sulfate/tungstate uptake family ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO1790 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2342264..2343085 /locus_tag="Silicibacter_2169" /function="COG: ABC-type tungstate transport system, permease component" /translation="MKLSHTLGATFAALTFATSTFAADQSIIVQSTTSTANSGLYDHL LPLFEDKTGIQVNVVAVGTGQAIKNAQNCDGDVLLVHAKAAEEKFVEAGFGTARTDLM YNDFVIVGPEADPAGVAGQSDVQAALSKISDAGALFASRGDDSGTHKKEVSLWADAGL DPTSASGEWYRETGSGMGATLNAGIGMGAYVMTDRATWISFGNKQDYTIKVEGDDDLF NQYGVIPVNPAQCPSVNVEPAQTFAAWLVSEEGQDAIAAYEVSDQQLFFPNAPKN" /product="sulfate/tungstate uptake family ABC transporter, periplasmic substrate-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO1791 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2343113..2344027 /locus_tag="Silicibacter_2170" /function="COG: Periplasmic molybdate-binding protein/domain" /translation="MAAPQADCDMTDLDLPDHEYLTVPELAELLRLKERKIYDLAASG EVPCSRATGKLLFPANEIREWIARAKSGGEPAPVHRPQILLGSHDPLLDWAIRQSQSG LASYVDGSMDGLERFLQGEGIAAGLHLRDEKSGQWNVPIVARMATRQNAVLIHFASRK RGLVYRDPDLDLASLNEISNLRFAPRQPGSGTDQLFRDLAAEARLDLKKVDLVDVARS EDEAVESVRRGLADVTFGLEAVAKSYGLKFTPLIDEEFALLVDRKAWFEPAFQCFLTF CQTDALAQRAAGMGGYNVSALGRVRWNA" /product="DNA-binding protein, excisionase family" /transl_table=11 /note="identified by match to putative ortholog SPO1792 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2344043..2344852) /locus_tag="Silicibacter_2171" /function="COG: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component" /translation="MSDTSLSRQPLEVRFRGGGFAPRNRRWVGLAVFVVLIALVEWGT RSGFISALTLPKPSDVFATLVELWQSGLFFQHMIPSLTRLAVGAALGASVGVGVGVLI GLFSYIRAGLVPLMAAIFPIPKIALLPLFVIWFGIDEGSKYALIAFGTFTPTVVATYG AVDNVDRSLIRMGQSFGLSWLSIVRKIVLPGAMPGILSGLRISLAIAIILLVAAEMLG AQYGIGAYILEAGSLYDLERLFAGVVILSLLGVLTSGTIGMIERRLLNWRS" /product="sulfonate ABC transporter, permease protein, putative" /transl_table=11 /note="identified by match to putative ortholog SPO3618 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2344845..2345612) /locus_tag="Silicibacter_2172" /function="COG: ABC-type sugar transport systems, ATPase components" /translation="MDIRLDGISHFYGETEVLRDISLDVASGQIVCLVGPSGCGKSTL LRFLGGLERPSSGRVLQLGTPPEGCLNPLTYVFQDFALLPWRSVRGNISLVLEDHGIR GARAEEIIADVLARTKLTDFANALPKQLSGGMKQRVAIARALAVKPAVMLMDEPLSAL DSQTRELLMDDLIALWERQPFTAVYVTHNLAEAVRLGHKIVVLSRRPGQIREVVEIEK PLSERGYADVDLEQIQKHLWTLMRDEARAADEELLDV" /product="sulfonate ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3619 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS complement(2345667..2346683) /locus_tag="Silicibacter_2173" /function="COG: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components" /translation="MTFNRRQTLALMGAAAASGLAAPALASGKKPVVGALSLTSHSGS FIALERGYFKEAGLDVELKFFQAAQPMAVAIASGDVDFGVTAISGGLLSLADKGAVKV IGGALSEEPGIDGQKILASDAAYQAGLTSVAALDGKRYGMTTAGSSFHYMGSKIAGAE GGTPQFVPLQKVGAIIGALKSGQIDAWSIVPHIAKPLAGSGAVHIIGNVADYLPNYQV TTVFTSAQNASKERGLTESFLKGFGMGVSDYNATMVDKQNGEDAINEMVDLIHKYVYT DRPREKAAPSIINGSMRLNKDAAINVASVSDQLAWMQSEGLVDAGITLETFLDTSYVD VIGA" /product="sulfonate ABC transporter, periplamic sulfonate-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO3620 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2346738..2347451) /locus_tag="Silicibacter_2174" /function="COG: Transcriptional regulators" /gene="ygaE" /translation="MSQSPKYPTFSISRDEMLFSRRSSDNETVVAMLASAIRRDISFG VLRPDEKLKIEALRQRYGGSNHSMRETLRMLVAEGMVEATNQRGFRVTSATEDDLADI LMMRLEVEKLALERAIAHGGVDWEAQIVAAHHQMMRAENQLNQAPDDATALGWDEACR GYIMALVSACGSPRLIEMTGRFYDQSRRFRLARLREGRIDFDARRDRQEALKAAVMER DTKRALRLLEEDTQADLSG" /product="Putative HTH-type transcriptional regulator in bphA 5'region" /transl_table=11 /note=", Putative HTH-type transcriptional regulator in bphA 5'region (ORF0)., Bacterial regulatory protein GntR, HTH, Bacterial regulatory proteins, gntR family" /note="High confidence in function and specificity" CDS 2347665..2348417 /locus_tag="Silicibacter_2175" /function="COG: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain" /translation="MKKQIAITALTLAATFGTAQAETINVGMSGGYFPFTFVKLDELQ GFEVDVINAIAAETGDEVNFVTMSFSGLIGALESGRIDTIANQITITPEREAKFAFSQ PYVFDGAQVVVKRGNEDSITGPSDLSGKSVAVNLGSNFEELLNELPNASEIDIRTYES NIAQDTALGRVDAFVMDRVSSAQLIAESPLPLALAGAPFSEIRNAMPFRTNAEGIALR DKFDAALTTLKEDGTLSEISHKWFGTDITVAE" /product="Putative amino-acid ABC transporter binding protein patH precursor." /transl_table=11 /note=", Bacterial extracellular solute-binding protein, family 3, Bacterial extracellular solute-binding proteins, family 3, 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein" /note="Conserved hypothetical protein" CDS 2348422..2349096 /locus_tag="Silicibacter_2176" /function="COG: ABC-type arginine/histidine transport system, permease component" /translation="MQGLNLEYMWDLVPILLGYVPLTLFMAVIGMACALVLASILAVE RVFQIPVLDAFVRLFISFFRGTPLLVQLFLFYYGLPQVLGFLGSIDGVTATIMGLTLH FSAYMAESIRAAILGVDRSQWEAAQAVGMTQGQMMRQIILPQAARVAAPTLVNYFIDM IKGTSLAFTLGVTELMGATQKEAAGSFLYFEAFLVAAAIYWILVEALSFGQRHLETYL NKAHAR" /product="Octopine transport system permease protein occM." /transl_table=11 /note=", Binding-protein-dependent transport systems inner membrane component, Binding-protein-dependent transport system inner membrane component, HEQRo_perm_3TM: amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family" /note="Conserved hypothetical protein" CDS 2349093..2349839 /locus_tag="Silicibacter_2177" /function="COG: ABC-type polar amino acid transport system, ATPase component" /gene="yckI" /translation="MSNTKGISISGLSKSFGESTVLRDISLEIQPGERVVIIGPSGTG KSTLLRCLNFLDRPDRGVIRVGDLSVDAANASRAEILALRRRTSFVFQNYALFANKTA LQNITQALITVKGMPKSAADARARTILQDTGLLDKADAYPAALSGGQQQRVGIGRAMA LDADLMLFDEPTSALDPEWVGEVLDLMRRVAEQGQTMLIVTHEMQFAREIADRIIFMS GGDVIEQGPPDQILSDPQDPRTRAFLRRVQ" /product="Glutamine transport ATP-binding protein glnQ." /transl_table=11 /note=", ABC transporter related, ABC transporter, 3a0107s01c2: phosphate ABC transporter, ATP-binding protein" /note="Conserved hypothetical protein" CDS 2350252..2350344 /locus_tag="Silicibacter_2178" /translation="MSSGEYYAGTRFDQILAKALAYDPHQPSGC" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS 2350316..2353447 /locus_tag="Silicibacter_2179" /function="COG: RTX toxins and related Ca2+-binding proteins" /translation="MTRINRPAADAEEFLLHSEVENEHDWRALPETFDVDDFAPWEEE WDLEEEEEEEEDPEHIDNSQFFQTDGSGNEGLIDNLLKLTGRDNAAANANGNANGLFK LVLGGDGDDSLTGSRDDDVVMGGRGHDSVEGGEGNDTLMGDEDGQTGSDATPLVLNIN NLVSQSYYDGASAGIGDTAVYRDVAFLEDGTAVWGRLVLVNASDPNMTIDLSGDRGAE ISITGNGYGDTAEFRLEFFDPTTGEPVNINSTATFNDLDQNYYNYDVEAVSLDTDEYT AFGTSDGTSLNVTNQDGSVRAAGTEANNPDDQDAWFSAEFEGRDFITFTLEARSTISG FTLSGDLIEDGVYVPIEQGNDTLLGGLGSDVIMGQGGNDSLDGGDGDDSIDGGEGDDV MFGGTGSDVLIGGLGGDTISGGDGDDLIDGGEGDDFLSTGLGNDTLLGGEGNDTLHNS AGDDSLVGGVGDDSIVATEGNDTLEGGDGNDTLYAGVDNDSLDGGLGNDSMFGEAGSD IMFGGGGMDYMEGGIGNDTIDGGDDDDTILGGDGDDLIYGGAGNDSLTTGAGNDTLFG GEGDDTLRNSVGDDSLSGGTGNDSIVATDGNDTLDGGSGNDTMYGGNDNDLLIGGTGA DLMYGEADADTFRIEDNFGNDTIVGGEAGNDQDVVDLSYMTGPVTVTYTGPEAGTITD GTDTIQFSEIEELILTDQDDVVDARNDTAGVQINAGSGNDSLTGGSGDDVFTGGAGDD LISLTASGGVDQITDFDINDTDVDGFYNDQLDVSGLTGGSGDGGAVRTIDVTTSDDGF GNALLTFPGGEQLVLQGVTPAQMTTHDQLFAAGIPCYTPGSRVITARGEVPVEEIREG DLVQTADNGLQPVIWVGHRRLSASDLARHPHLRPVLLRPGGIIANDRAMLVSPQHRFL LPSDGASRSESFVRARLLLELDPGHVHAEERASGVCYIHLMTEAHQVIFVDGCATETF WPGPEALRGLSPRDKREIFDLFPELIPALSNRGEIGRKLVSSRYGALARQDLRRKDIA QMEPFHPRQSRRA" /product="Iron-regulated protein frpC." /transl_table=11 /note=", Serralysin-like metalloprotease, C-terminal" /note="Conserved hypothetical protein" CDS complement(2353486..2354412) /locus_tag="Silicibacter_2180" /function="COG: Sugar kinases, ribokinase family" /gene="cscK" /transl_table=11 /note="identified by match to putative ortholog SPOA0276 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="fructokinase" /translation="MILCCGEALIDMIPGTTETGQAAFVPHTGGAVFNTAIALGRLGR RVSLLSGVSRDLMGRKLEAALRESGVSEGHLIRSDRPTTLAFVELQNGHAKYAFYDEN TAGRLITVADLPKLGAEVEALFFGGISLACEPCADTYASMLKRYGAERAVVLDPNIRP GFVPDEARYRARLKEMLAQADMVKVSDEDLAWLMPEQSDPQAQAAALQAWGPAVVLVT RGGDGAMGLLPNGESVTVAAERAEVVDTVGAGDTFNAGVMARLDESGALNKEALRKLD ASTLAEALRWGAKVAAVTVSRAGANPPWRSEL" /EC_number="2.7.1.4" CDS 2355072..2355641 /locus_tag="Silicibacter_2181" /translation="MKIDLNQSDCLVLQGTTRVISSVLGLALLVALGLALTAAISGAI AGWAIALAVVVVGGGILWLVYHQTEVVFDRTHNTLTLRKTMLHGTRVDTIPLDTVLQA DVDLRRNERSNNRLHASYTYRLCVITRAATHRHRVPLSHGYTTSKRSLLTAQEINDWL GVPNAPIARGLSMADIAEVMQTLGLRKSA" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 2355676..2356857 /locus_tag="Silicibacter_2182" /translation="MSQFTETTQVSLSVRLKNAFKGIGLGISFIGIALYFLFWNEGNA VRTARALDEGAGQVVSLDSATLDPTFEARLVHISGPAKLKAALVDAALGVEAPAQTVR LERIVEQFAWIEETQTWTDTKLGGGQDKTTTYTYRMDWTETPASGAAFRVSEGHMNPP MPIRSKILRQQDATVGAYRVSEEISDLGGATPVILTETQAAEIAEALPLSQTAKLVAG QVVFGETVARPALGDIRLRYQAARIDSASVIGLQRGNALVPYIAQNGRKIHLLTEGIK TAEEMFETAQRANTAKTWMLRIGLLVLLFLGFKALFGVVDVLASILPVLGWVSSSVTS LISVALAFCLGGLTMATAWFYYRPIVSLALIAVALAVGLVGALWLRSSAKHAPHPPGT T" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Protein of unknown function (DUF1625)" /note="Hypothetical protein" CDS 2356888..2357355 /locus_tag="Silicibacter_2183" /translation="MKHLTLSIALLITAGAAQAGRFCELDGTEVFSCTFKDGTRGVEV CNAIWAEGSKVAYGFFKSDGTVEKEILQDMATLEAAPWNGLGAFMSESVTFDGGGGYS YEVWSGSERAADATQIGGINVLRDGALIADLSCDTGTVQSDLSGLIEIIEAAE" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 2357367..2358185 /locus_tag="Silicibacter_2184" /translation="MSRTSQWLTCVFVAISWGYAAAAQSVCEGAVVFQCATEAAELRE QITVCAKDQSYSLTRHALSTGEMYYDTPLIADANTTWFLWSEEDQVQLEIGFWSTDLA EPVTLHAQLPWDDANETIADTGEYSMWLQSPHWRAEVDQTLCAPATIYADTDALWPAQ EMRGPIGAFFSKDAIIPRVETAGRARVLSTKGGREGVPVYAAARPSAATPVWWMLQPG ETVDLLDRVGDFVAVALPTNGMSDCTLRPERLGQPYAGPCATGWVDAALLERVQ" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS 2358157..2359170 /locus_tag="Silicibacter_2185" /translation="MQPCWSGFNNMTRTILPLLTVRQSARPPTFERKRIMKSCLATFV LGWLCSAGIAQAFCDDILATQVLCLTEEAEEIKVCASQHPEMGTPVLSLHLSPSVSNA PITRLAQDIPFGMTLGTGGVPWDIHEFSFVHDGGRAVLSLKTPIDSRETSEAEIWLDF FGRGTAPDRSLHCMQPALRAELDTLLSLRGISVNMLRTGPSAESAGYYQPHQPIVGAA PYGSADCREVAGILSNEGTENGQIALYAAPHAKAAILGYVFPSDLGAAFECAYENGYS GLIWSDPEKGDGRGGYVAALDFEARMAACALTPEAWPPNLAYWGTCSSAWVKESNVAG FEG" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(2359232..2359741) /locus_tag="Silicibacter_2186" /translation="MLDTILLAAQAFSLAFMAGWLTIGAMENLLHPFLNETYTAEVMD MARMREDYPEAYHFVAYRRVTSPGLRRALFRCIVVWEFAATFALWIGVGGLGLAAAGS LAPDVAVAIALVATMMFIATWCGFLIAGNWFCYWFGHEGGQNTHFQMTLWGMLNAVLL VAGAASLGV" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(2359802..2361466) /locus_tag="Silicibacter_2187" /function="COG: ABC-type dipeptide transport system, periplasmic component" /translation="MTHFTRTGQPLPASLTRQAPEMAADPVSRREFLATACSFGATAA TAYAMMGLNAPAQAAANAQMGGTVRIQQQLVAMRDPRKFDFNSLATFTRGWLEYLVQY NSDGSFTPILLDSWEISEDATEYSLNVRKGVTWNNGEPFTADDVANNIARFCDGTVEG NAMAGKMQVMIDPETNQILPGVVEVTDSHSLKLKLPKPDISLIASFADYPAAVVHPSF EEFSMLDNPIGTGPYLPEFYSVGDSAALVRNPDHTWWNAGNGGYMDRVEFIDFGADPA AFFAGADADEYDVNYDTEGDYMDAYDSLDGWTKHEVTTAATVLARCNQLAEVNGKAVY ADARVRRALAMAVDNEVVLEIAYGGQGRAAENHHVSPVHPDYADIGAPVRDPEVAMQL LEDAGMSDFEHELVSLDAAFWKATGDAIAAQLRDAGIKVKRTVFPTSTFWNNWAKYPF SVTNWNHRPLGIQTLALAYRSGQGWNESGFANAEFDALVEEALATADPEARSKIMAKL EQIMIDEGVIIQPYWRSLYNHSKSNLKGAEIHISNELYPQYMYWEA" /product="Periplasmic oligopeptide-binding protein precursor." /transl_table=11 /note=", Bacterial extracellular solute-binding protein, family 5, Bacterial extracellular solute-binding proteins, family 5 Middle, nickel_nikA: nickel ABC transporter, periplasmic nickel-binding protein" /note="Conserved hypothetical protein" CDS complement(2361562..2362446) /locus_tag="Silicibacter_2188" /function="COG: Probable taurine catabolism dioxygenase" /gene="tfdA" /transl_table=11 /note=", [EC:1.14.11.-], Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase (EC 1.14.11.-) (2,4-D dioxygenase)." /note="High confidence in function and specificity" /product="alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase" /translation="MTTIETKPLTPCFGVEVSGMTLSEVSKGHDFARLRDLFEEHSAL LFRAQEISNEEHMALAQLFGPIEDRKADERKPGEAFEVPEVSNVQKDGTTSGEMDLHT LNLKSNFLWHSDSTFLPTPALTNILIGRVVTTEGGATELASTRAAWAAMPEELKSRIR GRGIWHRYSHSRRKISPELAKLPMFNKWPDQHWSAVWPNPVNGREGLYIASHAFKVDG YDEAESQELLDELMAFCTQPEFTYAHQWNVGDVLIWDQRAVLHRGTPWPYEQPRTLSS ICVSVTEADGIGSIRMPA" /EC_number="1.14.11.17" CDS complement(2362458..2363867) /locus_tag="Silicibacter_2189" /function="COG: FAD/FMN-containing dehydrogenases" /gene="glcD" /transl_table=11 /note=", D-lactate dehydrogenase [cytochrome] 2, mitochondrial precursor (EC 1.1.2.4) (D-lactate ferricytochrome C oxidoreductase) (D-LCR) (Actin interacting protein 2)., FAD linked oxidase, N-terminal, FAD binding domain" /note="High confidence in function and specificity" /product="hypothetical protein" /translation="MTDTPTDRPSFDWANFAASLSPVEVIEEPVLIKKRSRDFFWYSP VLNAQLKKCFGDLVAVPHTKDEMRHCLQRAYEADVPVTLRGGGTGNYGQAVPLQGGLI LETTKMNRILEIGDGYVRAEAGALMADVNAALIAQGWEMAMFPSTQDIATIGGFVAGG SAGIGSIANGALREKGNIMQLKAFSLEAEPQEHVFDAEDALQLHHAWGLNGVITEVTL RTVPHRNWIGCMATFDSYEACYAAGYALATSTQIGRKLASTVEARIVAYFPRLKDHLR EGKHLLVSLVPAEDMEALRALIKAQGGHLDLAMSDAERQAAKLPHVFEFAYNHTTLQV LKADRAATYQQIGVPDPADARAVAAVGAALGNDVWQHHEFARVDGKIVAFDLPIIWFT DEARLREIDKTYEAHGHSVADAHTYFVEGGGLKNADYRHLAWKKRMDPKGLLNPGKSR AWEEVKHLPAEEIEAKAKG" /EC_number="1.1.3.15" CDS complement(2363864..2365135) /locus_tag="Silicibacter_2190" /function="COG: Cytosine deaminase and related metal-dependent hydrolases" /gene="codA" /transl_table=11 /note=", [EC:3.5.4.1] , Cytosine deaminase (EC 3.5.4.1) (Cytosine aminohydrolase)., Amidohydrolase" /note="High confidence in function and specificity" /product="cytosine deaminase" /translation="MSHAPGAQSRLSASRLTEARLPGVAVPAALVASADRFGGQPQGE HLVGDLVLRNGRAERLEAATVPPRRLVLPKLTEPHVHLDKCHTIYRMDGVGGGLEDAI SAQALDRETWTADDIRARAGRGLGELLAAGCSAVRSHVDWGSGRDPAQAPLAWDILRE LAQDASDAVIVQRAALTGADRMADIGYARACAARVAQSGGVLGSFVLNQPGRKEGIAN IFRVAEDMGLALDFHVDEGLARGLDGLEMIADAALATRFGGPVLCGHACSLMNRSDED VRRIAEKLARAEISVVALPTTNLYLQGRNNGTPDRRGLTRIHELAAAGVNVVLGADNV RDAFCPLGSHDPLATLSLAVLAGHLDPPFGDHLPMITTGARRALGLAPVTVDGAAIGD LQLFDALLVTDILGSRSAPRPLTDDLPGASL" /EC_number="3.5.4.1" CDS complement(2365132..2365923) /locus_tag="Silicibacter_2191" /function="COG: Uncharacterized protein, putative amidase" /translation="MSIQGYWAELKTTEFQTLSQDCIAVLPLGATEQHGPHLPLSVDT DLVQETAARMLANLDPAQSVLVLPALAITKSNEHNRFSGTLSLSPETLLAVLREIGAS VARAGIERLVLFNGHGGNTAILQVAARELRISHDLIVVVCSWSGFAEADGLFDPAAYA VDLHAGDSETSAMLASHPGLVDMSRAKTFGTAMEDWAGEFRFIGLTGEPATPGWIADD LNPDGVCGDAVAATAEKGEAMLASAGRNFARFLAEFAHFDHRRAP" /product="creatinine amidohydrolase" /transl_table=11 /EC_number="3.5.2.10" /note=", [EC:3.5.2.10] , Creatininase, Creatinine amidohydrolase" /note="High confidence in function and specificity" CDS complement(2365920..2366615) /locus_tag="Silicibacter_2192" /function="COG: GMP synthase - Glutamine amidotransferase domain" /gene="guaA" /transl_table=11 /note=", GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (Glutamine amidotransferase) (GMP synthetase)., Glutamine amidotransferase superfamily" /note="High confidence in function and specificity" /product="GMP synthase" /translation="MAQRVLLIRHGDEPEDDRVATWLAANGYEAVTRKPFAGDSLEDV GEVAASIVYGGLFDVFETEKYPFLRDEDRWIAQCLERDVPLLGICQGCQQIARHLGAW AGAPEREFFEFGYYPILPTETAGAFLDAPLRVAQAHYHTFDLPHGVVRLAGNEAYPNQ AFRYGDKVYGFQFHAEVTPAGFRRWQSSKVNVYGRPGVQDIQTQNRLMAAHDAAQAQW FNGFLDRFLGQAA" /EC_number="6.3.5.2" CDS 2366743..2367129 /locus_tag="Silicibacter_2193" /function="COG: Putative translation initiation inhibitor, yjgF family" /translation="MKALNPVSIRPPFAAYAHGTEIPAHKRVVVTSGQLGIRADDSIP ESSYEQAFICFENIREILREGDMAPSDIAHISAYVTSREHMAGYMRARDEFLAGTGRV PSSTLLIVSGFTREEFKVEVEVMAAI" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Endoribonuclease L-PSP" /note="Hypothetical protein" CDS complement(2367113..2367301) /locus_tag="Silicibacter_2194" /translation="MGSPDLRSSCHKFAEISGDRDLCAELERTDLVHVSRVGGQKSDI RRAAQDWSFIATKARWRP" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="Hypothetical protein" CDS complement(2367283..2367525) /locus_tag="Silicibacter_2195" /translation="MKSTPEHSLNIDLTPFEMIGGFAIYTANRPARLRRLWRRNRLSN ALVRGFASFTEGREPPFTFAPFTLGQAPAMGWAAPI" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(2367509..2367970) /locus_tag="Silicibacter_2196" /translation="MDDKISTSAELAEAAALPCHREVHTNPDAPEALKDVPEEMQKVP APEQKSPARWAYERLILYIQNFEKTLDGEHEVAMGFAGGDAGVLRIEGMGYFDPDIVT FYGSDERGGKTQLVQHVSQLNVILRAMSKPKPEEPAKRIGFRLVAELEEHA" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0300 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2368017..2369006) /locus_tag="Silicibacter_2197" /function="COG: Zn-dependent hydrolases, including glyoxylases" /translation="MGEAIEVAEGALWMRLPLPMKLDHVNVYAFDEGDSWTVVDTGMS SNKTRRIWEQLMAGPLGGKPVRRVVVTHHHPDHIGNAGWFQSEHGAELVTTRTAWLFA RMLTLDVQESWPEETLAYYRSAGMDPEVYDTRKADRPFNFADTVYPMPLGFTRVQQGD VFRMGGRDWDIHMGNGHAPEHATLWSRDDNLVLTGDQVLSSISPNIGVYATEPEADPL AEWLEACERLAALARPEHLALGGHKLPFTRLPLRMRQLIDNHHGALERLMEFLETPKS AAECFPTLFKRTIGPGEYGLALVEAVAHVNHLYRTGQVTRTRRSDEAWVYQRR" /product="metallo-beta-lactamase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0299 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2369060..2370772) /locus_tag="Silicibacter_2198" /function="COG: Acyl-CoA dehydrogenases" /translation="MSYRAPVSEYQFLLQQILGYDQITATERFAEADDDLMTAILTEA GKMSDEVMAPLQRGGDLEPARLENGVVRTSPGYGDGYKAIAEGGWIGMSADPEFGGMG LPMSLTTAVNEMMSGACLSLQLAPLMSQGQIEALEHHASDALKELYLPKLIAGEWAGT MNLTEPQAGSDVGALSSKAEDNGDGTYAVSGQKIYISWGDNDFTENVCHLVLARLPDG VPGTKGISLFLVPKYLPDENGNPGKANSLKVVSLEHKMGLHGSPTCVMQYDGATGWLV GKEHGGMAAMFTMMNNARLGVGGQGVGVAEGAYQHALAYALDRKQGKTPVEGGTGTIV DHADVRRMLMEMKADVYAARAIMLACAGAIDMGTATGDAEWKTRAAFLTPIAKAFGTE TGIRVAEQGVQVHGGMGFIEETGAAQFYRDVRVTAIYEGTNGIQAMDLVARKMMDGGE MAHRLIDEIEEQAERARPTHPNMAEAVWQACETLREATEWLVEANMQDRFAGAVPYLM AFARVLGGHYHLAAALADKGGAREKLARFYIKRMLPQHAAYLIHAREGAAGAFALTAE ELAS" /product="acyl-CoA dehydrogenase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0298 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2370968..2371939 /locus_tag="Silicibacter_2199" /function="COG: Putative translation factor (SUA5)" /translation="MSPAMTQASSETEALTAAPEAIARAAELLTAGQLVAFPTETVYG LGADATNGAAVAAIYATKGRPSFNPLIAHVADVRAARRLVQWNDWAEAMATAFWPGPL TLVLPLRPDHNVSPLVTAGLDTLAVRVPAKACSRELLAAVGRPVAAPSANPSGRISPT TADHVRAGLGGKIAAILDDGPCGVGVESTILGLAGAAPILLRPGGLAAEDIEHALGCT LMTRAEADPLTAPGQLMSHYAPNASVRLEAQDFSPDEVSLGFGPGDFDLNLSPSGDLN EAAANLFGHLHHLDALGRPIAVAPVPERGLGIAINDRLRRAAAPRDS" /product="Sua5/YciO/YrdC family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0297 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2372000..2372767 /locus_tag="Silicibacter_2200" /function="COG: Uracil-DNA glycosylase" /gene="udgA" /transl_table=11 /note="identified by match to putative ortholog SPO0288 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="uracil-DNA glycosylase" /translation="MESELDYWSAKALLEWQVELGATEAMMDTPIDRYGLEDQKPKPA RAADTPPTPVKPKTVDPVAEAAKLAKTAQALPSLRAALEQFEHCDLKRGARNLVFSDG QAGARVMIIGEAPGRDEDLQGKPFVGRAGQLLDKMLDAIELSREKNVYITNVLPWRPP QNRDPLPAEISMLVPFLERHVALAEPDILVLMGNISCQAVLGKRGITRLRGTWSEAWG KPVIPMFHPAYLLRQAHAKRQAWADLLELRARLNSLN" /EC_number="3.2.2.-" CDS 2372792..2373400 /locus_tag="Silicibacter_2201" /function="COG: Predicted phosphoesterases, related to the Icc protein" /translation="MKILAFSDLHLVEELAADLVTASVEADLVIGAGDFCNTRQGLAR AMELLAGIAAPMVVVPGNAESAEELRGCALSFMTVLHGESAEIEGLRIFGLGGGIPET PFGDWSFDLSDRAAARELAKAGENTGGIDILITHSPPKGAGDTTSAGLSIGSESIHKA ITTLQPKLAVYGHVHDSWGYRGQIGATQCANLGPTPNWFEVS" /product="Ser/Thr protein phosphatase family protein" /transl_table=11 /note="identified by match to putative ortholog SPO0289 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2373400..2374023 /locus_tag="Silicibacter_2202" /function="COG: Putative threonine efflux protein" /translation="MIALSTLAAFVPAALALNITPGADMMFCLGQGLKSGARPAIAAS FGVAAGGMVHVALAGLGVAAVVAAQPALFDLIRWLGVAYLLYLAWGALMRPGGAQPTG QPAQAARAFRAGLMVSLTNPKVILFVLAFVPQFIRPEAGSVLGQFLVFGAIIGIGGVF VNGGVGVFAGRARTLFAEDGSAARWMRRITGGIFAGLALRLALLERA" /product="transmembrane amino acid efflux protein" /transl_table=11 /note="identified by match to putative ortholog SPO0290 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2374029..2374571 /locus_tag="Silicibacter_2203" /function="COG: Molybdopterin biosynthesis enzymes" /translation="MSRIDDSKDFIPVRIAILTVSDSRSLDEDRSGQVLVDRLKAAGH HLADRNILPDERDEIADQLRQWCANPEVDVVISTGGTGLTGRDVTVEAHRDVYEKEID AFGTVFTIVSMQKIGTSAIQSRATGGVAQGTYLFALPGSPGACKDAWDEILQKQLDYR HRPCNFVEIMPRLDEHLRRK" /product="molybdenum cofactor biosynthesis protein B" /transl_table=11 /note="identified by match to putative ortholog SPO0291 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2374686..2376149 /locus_tag="Silicibacter_2204" /function="COG: Membrane-fusion protein" /translation="MRFLRHSVMGLFLAGLTAALLLFALHLVRSAVQESLAEERRAPP ARERIFAVNVVTATLGEERPELVGFGHVESRRTLELRAAVSGRVIALADGFQDGGRVT AGDTLVEIDKADAEAALARAKADMMDAEAERRDAGRALDLARDELETAQMQADLQERA YQRQVDLKTRGVGTEAAVEAAELTATSARQSVITRRQAVSQGEARIDQAQTLVARAQI ALDEAQRDLEDTTLTAPFTGTLQSVNLVEGRLVSANEILAELVDPNQLEVAFRVSTAQ YARLLDDDGRLIPAEVIVTLDAAGADIRATGRLARASGAVGDGQSGRLIYARVEDNAG FKPGDFVTVRVQEPAIADLIRLPASAMDSRQTVLVLGEDDRLQEVPVELVRRQGDEIL LRASELEGRQVVTGRTPLLGAGIKVRPLTKGAENALKAADPDLIELTEERRATLKAIV SDNGQMPSEVKTRVLAELDQPKVPAALISRIEDNRGG" /product="efflux transporter, RND family, MFP subunit" /transl_table=11 /note="identified by match to putative ortholog SPO0292 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2376210..2379623 /locus_tag="Silicibacter_2205" /function="COG: Cation/multidrug efflux pump" /translation="MATTPIQKASGILSYFTRHRTAANLLLMVLLVLGAAAIPNMRAQ FFPDVIVESVDVSVVWEGAGPEDVDSAIVQVLEPALLAVDGVEDTRSASREGRAVIDI DFEPGWDMARATDDVQNAVDAITTLPEEAEEPEVERAVWRDRVTDIVITGPIGAQQLG ILADELILRLFEVGVTRTTIRGVAAPRTIIEVPSSQLIAHDITLAEIAAVIAAEVEIN PAGEIEGANARVRTGTQKRTPEELEAVVLRSEADGSALTIGDMASIRVEGVDRQRSYF VGDNRAMSIRVDRSDQGDAIRIQRQVEEVVAEMNLSLPQGVEVSLIRTRAEAISGRLD ILVDNGLMGLGLVVILLFLFLNARIAFWVAAGIPAAMFAAIALMYIGGLTINMISLFG LIITLGIVVDDAIVVGEHADFRARRLGEPPMVAAENAARRMAMPVFAATLTTVIAFFG LTAIGGRFGELIADIPFTVIAVLAASLVECFLILPNHMAHALVHRSKEHWYDAPNRVV NRGFRWCRDQLFRPLMVGVVRARYVVVAGALVLLASQMALFIKGDVTWRFFNAPERAS VSGNFAMVEGATRADTLAQMREFQRMVDVLGAEYEERYGRNPVDFVMAEVGGNTGRGL AGTETKDSDLLGSIAIELIDADLRPYSSFAFVGELQKRVVQMPLTEVVSFRGWRSGPG GDALDVQFYGADVTTLKGAAEDLKTALTRYPEVSAVEDNLAYDKEELVLDLTPQGQAL NFTIDSLGRALRQRLNGIEAATYPEGPRSAQIRVELPEGELTADFLERTQMRAPSGIY VPLSDIVTVSQRTGFSTVRRENGVRLISVTGDISEDDPVQAEAIMEALETEILPKIAE ERQVEFRLSGLSEQEDEFLSDARTGLILCLTGIYLVLCWIFSSWTRPIVVMAIIPFGL VGTIWGHYLWDLPMSMFTVVGLLGMTGIIINDSIVLVSTIDEYAQERGLIPSIIDGAA DRLRPVMLTTLTTVLGLAPLMYETSQQAQFLKPTVITLVYGLGFGMFLVLLVVPALVA IQADVARPFQALKRAVAAGPHRVAHRLRALILLGAALQAVWLGLTLGWTLLTGALPAA VGTALPFVTQMDPLRAALMLGLGGVSVLALLVYVIGAVGALRGTSRQTS" /product="transporter, AcrB/AcrD/AcrF family" /transl_table=11 /note="identified by match to putative ortholog SPO0293 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2381023..2381682 /locus_tag="Silicibacter_2207" /function="COG: Putative transcriptional regulator" /translation="MTASQRLAPAEAGLQQLLLRVILSEAAAGHSRGSDMKLTGKLLI AMPGIGDPRFDNSVVFLCSHGQEGAMGLIVNKLAPGVVLKSLFDQLDITSKPAAATEP VYFGGPVETQRGFVLHSDEYISTVNSLPVCPGLSMTATLDVLEDIAEGRGPERYLVML GYAGWGPGQLEDEIAQNGWLTADTEPDMVFTDLADGKWEAALASLGVTPLNLSMDAGR A" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0296 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS complement(2380125..2381168) /locus_tag="Silicibacter_2206" /function="COG: Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis" /translation="MPGMAISNLPVSFMSLPLLWPAAASLRMTRRSSCCNPASAGARR CDAVTFALFAQVSLGCDLALTAQGAKPLNMTTQLRIRLRIALLACLACLGLASASLAR ENLADLVSIEVLDGGPTKDGRYMGALHLRLAQGWKTYWRAPGDAGIPPRFDWKGSRNV ANLRITWPTPELFLTSGFRTIGYHDELVLPIEITPKYAGAPIRIKGRMELGLCKDVCI PSELRFDHRADLSAGRHPAIAAALAARPYSAAEARVRGVTCRLSPTPYGMKVSARISM PSAGREEYAVIEGGASLVATETKSWREGRELVAEAELLPAQDGPIAVDRSALRFTVLG TSHAVDIRGCTSG" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0295 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2382004..2382963 /locus_tag="Silicibacter_2208" /function="COG: Ornithine carbamoyltransferase" /gene="pyrB" /transl_table=11 /note="identified by match to putative ortholog SPO0287 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="aspartate carbamoyltransferase" /translation="MQPPSFDQPHLLGIEPLRPHEITAILDLAEDYVALNRQTEKHSD ALAGLTQINMFFENSTRTQASFELAGKRLGADVMNMAMQASSIKKGETLIDTAMTLNA MHPDLLVVRHPHSGAVDLLAQKVNCAVLNAGDGRHEHPTQALLDALTIRRAKGRLHRL NIAICGDVTHSRVARSNLILLGKMENRIRLIGPPTLVPQQFAEFGAEIYDDMREGLKD VDVVMMLRLQKERMDGGFIPSEREYFYRYGLDAEKLALAKPDAIVMHPGPMNRGVEID GTIADDIKRSVIQEQVEMGVAVRMAAMDLLARNLRAARQKQAS" /EC_number="2.1.3.2" CDS 2382969..2383502 /locus_tag="Silicibacter_2209" /translation="MQDVIEIPKGARDQVLIFALDMPVEQTKFLRDEDGALAQVLGLP TIEMTQVEIFPVEDLEGLGLLGYLREGMGVSEADLSEHGMALDGLSGWVLVLRARAFD GAATRLTPARSVTLVARLGEVKTDWSAPSTIPSAAAQPTLRTPPREARNRARRIGASL FAVVMLLICLAIWGLVT" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0286 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2383609..2384919 /locus_tag="Silicibacter_2210" /function="COG: Dihydroorotase and related cyclic amidohydrolases" /translation="MTTLFLNARLIDPETGTDAPGSLLVQRGKILARADQSDKEMFLA DNGLRTKDVQMVDCNGKCLAPGIVDIGVKVCEPGERHKESYKSAGLAAAAGGVTTIVT RPDTSPCIDSPETLEFVTRRAQADAPVNVLPMAALTKGREGREMTEIGFLLDAGAVAF TDCDHVVTSTKVLSRALTYAKSCGALVIAHPQEPGLSQGAAATSGKFAALRGLPSVSP MAERMGLDRDIALLEMTGAKYHADQITTARALPALERAKANGLDITAGTSIHHLTLNE LDVADYRTFFKVKPPLRSEDDRLAVVEAVRSGLIDVISSMHTPQDEESKRLPFEEAAA GAVALETLLPAAMRLYHAELLDLPTLFRAMALNPSRRLGLASGRLSAGAPADLVLFDP DAPLVLDRFKLQSKSKNTPFDTQRMQGRVLATYVAGEPVYRKDA" /product="dihydroorotase, multifunctional complex type" /transl_table=11 /EC_number="3.5.2.3" /note="identified by match to putative ortholog SPO0284 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2384919..2385527 /locus_tag="Silicibacter_2211" /function="COG: Predicted membrane protein" /translation="MLPALETTLPLLLFWGGIGYLLGSVPFGMVITRAFGLGNLREIG SGNIGTTNVLRTGSKAAAAATLLLDGGKGAAAVLLARALAGEDAAQLAGLLAFLGHCF PVWLGFKGGKGVATFLGLMLALAWPVGIACCLTWLGVAVLRRISSLAALCAAVAAPVW CLLLGAPQAAVLSALLALVILWRHRENIARLRAGTEPKIGQK" /product="conserved hypothetical protein TIGR00023" /transl_table=11 /note="identified by match to putative ortholog SPO0283 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2385798..2386283 /locus_tag="Silicibacter_2212" /translation="MTKTTSFTKSLLGGLAFSVALATSSLAAGVDVNASSTGLAMQGY DPVAYFTEGEANKGSYKLTSTFDEATYWFTSEENKELFEANPEAYVPAYGGYCAFGAA MGFKFDGDPHQWKIVDDVLYLNLSKDIQERWVEDIPGYIEKADVNWETIEDAAPAELL Q" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0281 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2386383..2386637) /locus_tag="Silicibacter_2213" /translation="MERFFISAFEKLVGVIVVLLLLVVLGGVVVAFIEPSAGGLLPAL GVLLGGTLYVILIGGSLYLALGIYNNTKRTAEAMERMAGK" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note="unique gene to TM1040, belas" /note="Hypothetical protein" CDS complement(2386839..2388209) /locus_tag="Silicibacter_2214" /function="COG: Gamma-glutamylcysteine synthetase" /gene="gshA" /transl_table=11 /note="identified by match to putative ortholog SPO3626 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="glutamate--cysteine ligase" /translation="MSIPQSGGGPIESHAQLAAYMEAGCKPRDDWRIGTEHEKFGYCK DTLKPLPYEGTRSILAVLEGLRDRHGWEPVTEGGKLIGLTKDMANVSLEPGGALELSG APLETIHETCDEVNTHLREVKDIADEIGVGFIGLGAAPIWQHDEMPLMPKGRYQLMND YMERVGTMGRAMMRRTCTVQVNLDFASEADMVQKLRVALALQPVATALFANSPFFEGK PNGLKSWRSHIWRHLDDARTGMLPFVFEEGMGFERYADYALDVPMYFVYRDGKYINAL GQSFRDFLKGELPALPGETPTLSDWADHLTTAFPEARIKKYMEMRGADGGPWRRLCAL PAFWVGLMYNQSALDAAWDLVKGWDAETRENLRIEAAVKGLQAEVGAIKMHDLAREVL AISEAGLKARARQGAGGLVPNETHFLNALRESVESGKVPADELLDRYNGDWNGDLTRI YADYSY" /EC_number="6.3.2.2" CDS complement(2388315..2388842) /locus_tag="Silicibacter_2215" /translation="MSFIRPEARAALWRWRELLGALALLLLGLRWALWGIGLTQVTGW ACVTLAVVLAVVGAQRMRFRLGSGGPGVVQVTEGQISYFGPLTGGAVARSEIETLRLD HTARPSHWVLEQPGQPPLAIPVTATGAEALFDVFASLPGLKTERMLSELHHKGPHQVV IWQKSPESHQAYRLH" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3627 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2388839..2389708) /locus_tag="Silicibacter_2216" /function="COG: Predicted acetyltransferase" /translation="MAWRAAEPSDLAWIEALLFAHIEGAMFLIGNLRDHGFGSDHSHG LTLWVREARDGVFGITNSGSVMMMAPGATRRDWQEAGQLLAGRDVTAVLGKAMQARRF IAANDIGDHPCQLDRDDPGFVLDLRDVSVEMRPEEALVPLAEAPRGLVEGWRAAYEVE VLNAAPDAARDKARHDIATYIARDSHRVLTVQGEPVAMSGFNTAFDEAVQVGGVYTPP MLRGRGYARRVVGRHLLEARERGARQGVLFAAGKDAARAYRALGFQPADAFALVLFST PAQICAGRVEDVR" /product="acetyltransferase, GNAT family" /transl_table=11 /note="identified by match to putative ortholog SPO3628 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2389708..2390448) /locus_tag="Silicibacter_2217" /function="COG: Uncharacterized protein conserved in bacteria" /translation="MSAKVRLYVDHPLGAGQTVPLDRDQAHYLFGVMRLSVAARVALF NGRDGEWQAEVAEAGKRGGVLACLEQSKPLQLPPDLWLIFAPIKKARTDFIVEKAAEM GAARILPVATEFTNSERIRQDRLQAHAVEAAEQCGGTYVPEVAELQKLPSLLDHWPAE RQLMFCDEAEIGQRLFLDVAQVEGSAGAAGPWAILIGPEGGFSDAERKRLHAMPQAHV VSLGPRILRADTAAVAALTLWQQRLGDW" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO3629 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2390461..2391423 /locus_tag="Silicibacter_2218" /function="COG: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases" /gene="ubiA" /transl_table=11 /note="identified by match to putative ortholog SPO3630 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="4-hydroxybenzoate polyprenyl transferase" /translation="MQGQSPTPDGQVADAVKDNWVDIYAPAWTRPYLRLSRADRPIGT WLLLLPCWWGLALAMIAGQDARWEDLWIFVACALGAWLMRGAGCTWNDITDRNIDGSV ERTRSRPIPSGQVSIKGALAWMALQSLIAFGILLTFNQAAVAMGILALFPVAIYPFAK RFTWWPQIFLGLAFNWGAMLAWVAHTGHLNWPAVVLYVAGIAWTLFYDTIYAHQDAED DALIGVKSTARLFGTNTPTWLRRFIVATVSLMALAIIMAVQPAASVLALALSLCAPWA MGWHMTWQLRAFDADNNDRLLSLFRLNRDTGLIPLIFLGLALFA" /EC_number="2.5.1.-" CDS 2391505..2393466 /locus_tag="Silicibacter_2219" /function="COG: Outer membrane protein and related peptidoglycan-associated (lipo)proteins" /translation="MRISSFLIPTAAFAGAAGLSLVVAGFAATALENNSEIVVRRTLD KAGFTWAEVAADGLRVELSGEAPDEATRFAAISEVGSVVDAARIIDQMEITPSKGIAP PRFSTEILRNDAGISIIGLIPSDSDHRALVKKLGAIRGAPQVTDFVETADYPMPKGWT DAMSYALKALALLPRTKISVEAGAVQITAIADSPEAKEELETELNRMLPPNVHVTLDI AAPRPVISPFTLRYVLGPEGGRFDACSAESEESRSRILDAARDAGLERQADCTIGLGV PSANWSRAVEVGLEALTSLEQGSITFSNGDVTLVAAQGTPEALFDRVVGELENALPQV FVLHAVLPEPEETTADIIPEFTATLSPEGQVQLRGRLSDNAQKRTVDSYAKARFGSDT VYVATRNSPDLPGVWPIRVLAALDALAQLERGSVTVTPELVAVRGMSHVENASAEIAR MLSQKLGEAEDYDLDITFEKPPEPEDKLMAPQLCEAELAAIQRADKIAFEPGSATVAA DSARVIDKIAKLLQQCGEIPLEIQGHTDSQGREEMNQNLSQARAQSVLNALRARRILT GSFVARGYGEDNPIASNDTEEGREANRRIEFRLIESALPQDDAETAEAESDAQSADAE AAPAGDADAQTPETPPAAAAAPEEDTDGQ" /product="OmpA domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3631 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2393463..2393783 /locus_tag="Silicibacter_2220" /translation="MSRTEFILTTAIILFVAFAMGWFANWLVHRFTRVRQSDVADLDR MSQELHEAEETRDQAITYLQQREAELTNQLSQTEAELRAAMDGLREARHETEELRNQL RGAG" /product="conserved domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO3632 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2393740..2394180 /locus_tag="Silicibacter_2221" /translation="MKPKSCATSCAVPAKAPLRTMSNDPLLDELRAHEEQVWDALVRG DADLDASLLCQSFLGVYGDGFADKSAHVGQLAEGATVQSYALTDLRARALGSDHAMLS YRARFMRHRRNQAEDMYVTSIWQRTEGGWINIFSQDTAAGEATD" /product="hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO1334 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2394387..2395088 /locus_tag="Silicibacter_2222" /function="COG: Phosphatidylserine decarboxylase" /gene="psd" /transl_table=11 /note="identified by match to putative ortholog SPOA0292 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="phosphatidylserine decarboxylase" /translation="MNMIGTFIKPMHPEGRKFVAIFAAVTFGLFLLTPILGWIGVGLT VWCYYFFRDPERVTPARPGLVISPADGVVSLIEPAVPPAELGLPDVPLTRVSVFMSVF NCHVNRAPVAGEVTAVAYRPGKFFNASLDKASADNERNSLAIRMEDGRDLAVVQIAGL VARRIVCFVKPGAQLGRGERFGLIRFGSRLDVYLPEGVSPQVEIGQTMIAGETVIAEL GTGVHTDQNKGELHG" /EC_number="4.1.1.65" CDS 2395081..2395848 /locus_tag="Silicibacter_2223" /function="COG: Phosphatidylserine synthase" /gene="pssA" /transl_table=11 /note="identified by match to putative ortholog SPOA0293 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="CDP-diacylglycerol--serineO-phosphatidyltransfer ase" /translation="MGDDEEHHPPSHLTLVQLIPNMLTIAAICAGLSAIRFGIEGNYV LAVQLILAACVLDGLDGRLARLLNSDSKMGAELDSLADFVNFGVAPALVIYFWALEDL RGFAWITVLIYAICCVVRLARFNVTAKADPSEDKDASGAYFTGIPSPAGALLAMLPMF LSFAFADAPLLPDVVICLHLILVGWAMIARFPVWSFKTAKISRNNVKFFLVGFAVLGS AVLIYAWITLVVLCLAYLIVVLWSILSHRISDDRKGH" /EC_number="2.7.8.8" CDS 2395829..2396470 /locus_tag="Silicibacter_2224" /function="COG: Methylase involved in ubiquinone/menaquinone biosynthesis" /gene="pmtA" /transl_table=11 /note="identified by match to putative ortholog SPOA0294 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" /product="phosphatidylethanolamine N-methyltransferase" /translation="MTGKDIEVKIEAVESSYARWAPVYDRTFGAVTDVGRRRAVSFIN NRKGHVLEVGVGTGLSLPHYGPDVRVTGVDFSAEMLAKAQRKVDALDLDGRVDLQRMD ARELAFENATFDTIAAMHVLSVVPEPERVMAEIARVLKPGGKVVITNHFAKDTGVLAG LERVAAPMANLIGWHSDFKMDTILQEPSLQVAELRKLPPLGMMTFLVLEKRVN" /EC_number="2.1.1.17" CDS 2396801..2398234 /locus_tag="Silicibacter_2225" /translation="MPDIDIVRSDNDPRQSDHGIRTDTASRGVDLEGAKITVTYTDGT TETLTWKALDPYTAGGATGDNIDMYFGYDWHQLTTTKPLASLKIDLAPANSVFDTTFA SDGNPNDPSTPGSKEGFPFKVSPDYEDLGGTITATYSGIAGLDGNAPVGDLYTTMTLD FTSLPGGGLQGDLVWNSDIDTLTGPFASSVTATDDFVSISGNGSEVIDILGNDAGAGK GPLTISHIAGTAISAGESVTLASGEVITLNPDGTLSITNDSPEDETNSFTYTVVDEAG NTATGTVTVDTKLTAPPCFVAGTLIDTEAGPIAVEDLTVGMQVMTRDHGPQPLRWIGR STRLARGRNAPVLIARNALGHHGQIALSPNHRVLIRSELADLQFGQPEVLIKAKHLVN GDSIRILSDGTQVCYVHILFDRHEIVRANGLDSESYHPGAETLGAFDADTRAEILDLM SDWQEYGPAARITLKPRECALLQLNRH" /product="hypothetical protein" /transl_table=11 /note="Hypothetical protein" tRNA complement(2398294..2398377) /locus_tag="Silicibacter_33" /gene="Silicibacter_33" /description="RNA" /note="Created by Search for RNAs Autoannotator" CDS 2398777..2399454 /locus_tag="Silicibacter_2226" /function="COG: Lipoate-protein ligase B" /gene="lipB" /translation="MVEWITSDGLVSYEEATRFMEERAEAIAAGEAEECIWLLEHPPL YTAGTSARIEDLTDPDRFPVHVTKRGGQYTYHGPGQRVIYVMLNVAERGKDVRCFVRQ LERWVILALEEFNVTGHIRDGRVGVWVERPEKPLTPAGAVAEDKIAAIGIRLRKWVSF HGISINVEPDLSHFSGIVPCGISEHGTTSLVDLGLPVTLADVDVALRRTFDLAFSEEA APSCDLD" /product="lipoate-protein ligase B" /transl_table=11 /note="identified by match to putative ortholog SPO1389 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2399910..2402132 /locus_tag="Silicibacter_2227" /function="COG: Bacteriophytochrome (light-regulated signal transduction histidine kinase)" /translation="MNSSLASFFARTPAATLDSCDSEPIHLSGLIQNTGALIVQDPET GLIIGASENAHLFLGRPVEAILGFSLTEIAPDIADELAEPDNGQNIVHEILESQRNVD DCVYDTICHVHDGRRVIEFVLNEAPSASQARKRMRMSGPACAQIMAAPTFDAAMQIAC NTVRTLTGFSRVKIYRFLPDWSGETIAESNDGSLPSYLGMHFPSGDIPKQVRALMEIV PFRFVGRVDDDNIAIRALTSGAGDIDLTWAMNRSVSAMHTAYLRNIGAGSSFSCSLMD KGKLWGLIACHSGGSMVVPADSWSLVQEIGTALMLKFDQTERMATADMISRLRRIENE FAAEMRRTGDVEDVIKTLVPILQKFLRADGFAFQFGTNMHTSGEVPPENFIRKLVQWS KTNMEDVDQFQTASLHADLPEAKHHIDTACGVLVQPIVMHRVCQLLWFRGPITRRVAW AGRPDAQAKIDPKTGVTLGPRQSFDKWVEEHRDQSLPWEEAELEAAREIFKEFLDIIT SQLLLKEENSSLRKFAHTAAHDIKGSLRGISAALGWMEEDDFEKTTTREHQELALAQA RKLQNLTESLLEMTLLREQPTAKFSKTDLKKLAEDTKLLIKYDLEQAGGQINVGALPD CTVASDLITRLLLNLCGNAIKYAKSDQPLQIDITGEVLDGEMNRLIVTDNGPGIESKH AEKIFEQATRLHDGGEGCGFGLAICTEIAKSHHGQIYLDTSYSDGARFVFEWPCEDPT " /product="Phytochrome A." /transl_table=11 /note="Bacteriophytochrome, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, belas" /note="Conserved hypothetical protein" CDS 2402134..2402778 /locus_tag="Silicibacter_2228" /translation="MTKAGEIGGRERLRLATDPQHQEMHHHPVMACLLAPSVTLAQIE TASAVSLGAAREIERARAASGEWADFSLSAYLQRLHHGLPAHLQTQHAPPVALPTDRY AALGGLYVIHGSAFGATLIANKIRAHLDIDPAPYFPAIDKTIWRRLVATLNAMTEEEA DAAVRGACQAFLLFKRIADRQTLQHTLQVTPFEALHQPQPVDAAINAAGAIAAP" /product="hypothetical protein predicted by Glimmer/Critica" /transl_table=11 /note=", Heme oxygenase" /note="Hypothetical protein" CDS 2402940..2403503 /locus_tag="Silicibacter_2229" /function="COG: Thioredoxin-like proteins and domains" /translation="MFIQTESTPNPATLKFLPGQTVLDAGTADFPSAEAASKSPLAQR IFAVSGVTGVFFGNDFVTVTKDDSVEWDHIKPAVLGAVMEHYQSGQPVINEGQQQASG HAEHTGEDGEIVNQIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSS TLTLKMGIENLLRHYIPEVTEVRPVAV" /product="nifU domain protein" /transl_table=11 /note="identified by match to putative ortholog SPO0382 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2403604..2404374 /locus_tag="Silicibacter_2230" /function="COG: Metal-dependent proteases with possible chaperone activity" /translation="MLPRIDHLVTAGPMTAPLNDLRVVRRSATDRGPHPQRDRLQMPA KAPLILGFDTSSAHCAAALLRGETVLAQRREEMARGQAERLMPLIEEILAEGEATWSD LDAIAVGIGPGNFTGIRISVSAARGLALGLDVPAIGVSSLEAQAFGQNAPVISSVDAR RDHLYLQVGDQPPGLYTLETLPPLLDGAMCVGQQASEIAARCNGTVAEPRYPVAEAIA RVAASRLGAPDLPAPAPLYLRDADAAPSREQPPALLND" /product="protease, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0381 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2404378..2404812 /locus_tag="Silicibacter_2231" /function="COG: Acetyltransferases" /translation="MTDSTMDDSPAALAATHRAAFTQSRPWTEAEFGDLLSDRFTYLT GDARAFAVVREIAGEAELLTIATHPDEQRQGHGRKIMQMWMHNAATRGATDAFLEVAQ DNLAAQALYSACGFGLVGIRKAYYPRPEAEAADALLMKRELP" /product="ribosomal-protein-alanine acetyltransferase, putative" /transl_table=11 /note="identified by match to putative ortholog SPO0380 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2404949..2405944 /locus_tag="Silicibacter_2232" /function="COG: Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein" /translation="MTLMKSLMGAAAAVALTAGSALANPAVIFDLGGKFDKSFNEAAY NGAQRWADETGGKYLEIEMKSEAQREQALRRFAESGANPIITTGFAMSAPLEEVAGDY PDTKFVTIDGWVDAPNVHVVSFSEHEGSFLVGMLAAEASKSGTVGFIGGMDVPLIRKF ACGYAQGVKAVNPDATIISNMTGTTPAAWNDPVKGSELTKAQISQGADVVYAAAGGTG VGVLQTAADEGILSIGVDSNQNHLHPGKVLTSMLKRVDVAVYEILKAGEDLEIGKVTL DLSDNGVGYAMDENNAELVTAEMQAAVEDAKAKIISGELKVHNYTSDDSCPVLNF" /product="sugar ABC transporter, periplasmic sugar-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0379 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2406134..2407663 /locus_tag="Silicibacter_2233" /function="COG: ABC-type sugar transport system, ATPase component" /translation="MTAPAIELKGISKAFGPVQANKDISISVQPGTIHGIIGENGAGK STLMSILYGFYKADKGEIWIKGQKTEIPDSQAAIAAGIGMVFQHFKLVENFTVLENIV LGAEDSGLLMPSLSRARKELKELEEEYELYVDPDKRIDEIGVGMQQRVEILKALYRKA EILILDEPTGVLTPAEADQLFRILDRLRSEGKTIILITHKLREIMEYTDTVSVMRRGQ MTATVKTAESSPEQLAELMVGRKVLLRVDKVPATPGKPILEIEKLSVVDSAGVQRVKD IDLTVRAGEILGIAGVAGNGQSELLEVLGGMREGTGNIRVNGQPLPLSGKGSDARARR HAGIAHVPEDRQREGLIMDFHAWENVAFGYHREDIYKKGLLLDNARLRADTEAKMEKF DVRPPNPWLAAKSFSGGNQQKIVVAREIERNPDLLLIGQPTRGVDIGAIEFIHQQIVE LRDQGKAILLVSVELEEILSLSDRVAVMFDGKIMGERPADQTDEKELGLLMAGVAGEA A" /product="sugar ABC transporter, ATP-binding protein" /transl_table=11 /note="identified by match to putative ortholog SPO0378 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2407664..2408758 /locus_tag="Silicibacter_2234" /function="COG: ABC-type uncharacterized transport system, permease component" /translation="MEKMPKWADVVLIPLISLLLAAVISAIVILLIGESPIEALNLMV NGALGSTYGWGYTLYYATNFLFTGLAVAVAAHAGLFNIGGEGQAMIGGLGLALVCLYI PFPHWSIALIFAALGAGIFGAAWAAIPAYLQAKRGSHIVITTIMFNFIAAAVLNYMLV NALKPKGAMDPSTAKFPESAQLPSLHEILAPIGIEFSKSAPANVTLFVGIAACIVVWG LIWHTPLGHEIRALGKSERGAVYAGISPVRTVMITMLISGALCGLMATNNVMGEAERL VLNATEGAGFIGIAVALMGRNHPFGVFLAAILFGFLYQGGAELALWTNIPSELIVVIQ ALVILFTGALDNMVRMPIEKIFLAFRKENA" /product="sugar ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO0377 from Silicibacter pomeroyi DSS-3" /note="Conserved hypothetical protein" CDS 2408758..2409765 /locus_tag="Silicibacter_2235" /function="COG: ABC-type uncharacterized transport system, permease component" /translation="MDFLTLIQVFDSTVRMATPLLLACLAGLFSERAGIFDIGLEGKM LMAAFFSAAVAAVTGNVWLGLLAGIGASLLLSGLHGLASITFRGNQLISGVALNFLAS GLTVLIAESWFRQGGRTPSLLTEGRFNGIELPFAIGPSDAEAAGRPLSEMIAEANVIQ QIWSELISGHSILVYVAVLMVPLTWWVLFRTRFGLRLRAVGENPAAVDTAGVSVRSLR FAAIGIAGVLCGIAGAYLATGLQAGFVKEMTSGRGYIALAALIFAKWRPWHALGACLL FGLLQAVALRFQSIQLGGVSIPVQVMDALPYVLTVVILAGFVGKAIPPRAGGQPYVKE R" /product="sugar ABC transporter, permease protein" /transl_table=11 /note="identified by match to putative ortholog SPO0376 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS 2409887..2410879 /locus_tag="Silicibacter_2236" /function="COG: Predicted permeases" /translation="MQLRPMGCRVAACPCPSASRRRPRDMNIYLPIAEVAVNAFLILG LGGMVGVLSGMFGVGGGFLLTPLLFFIGIPPAVAVATGANQIVASSVSGVLAHLRRRT VDLKMGAVLQLGGLIGAGLGVAIFNYLKSLGQIDLFVTLCYVVFLGIVGGLMFIESVN ALRKSKRGGAPKRRQRGWVHSLPFKMRFRTSGLYISVLPPVAVGLFVGMLTAIMGVGG GFIMVPAMIYLLGMPTKVVVGTSLFQIITVTAATTMMHAVTNQTVDIVLAVLLLIGGV VGAQFGTRIGMLLKAEQLRILLALLVLLVCGKLALDLLLEPSELYSLSPLREVR" /product="membrane protein" /transl_table=11 /note="identified by match to putative ortholog SPO0375 from Silicibacter pomeroyi DSS-3" /note="High confidence in function and specificity" CDS 2410879..2411646 /locus_tag="Silicibacter_2237" /translation="MSLLRLISFTICATLSALAATAEEVVLGLSQDRVAITATFDGSE ILIFGAVKRESPIATEAPLEVVVTVAGPSETVLVRRKDRELGIWVNTEAVTVDSAPSF YAVATSAPFSEALSDTEDLRHKISINRAIRSVGATVEGAQSFTDALMRIREEKGLYSL QENTVAVDEQTLFRTALRMPADLIEGHYRTRIFLTRAGRVVSQYETVIEVNKVGMERF LFNLSREQPAIYGLLALVIAVVSGWGAAAGFQLLRAR" /product="conserved hypothetical protein" /transl_table=11 /note="identified by match to putative ortholog SPO0374 from Silicibacter pomeroyi DSS-3" /note="Hypothetical protein" CDS complement(2411762..2412499) /locus_tag="Silicibacter_2238" /function="COG: Dehydrogenases with different specificities (related to short-chain alcohol