Roseobase: Ruegeria pomeroyi DSS-3

Name: SPO0006
Type: CDS
Description: identified by match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00539; NCBI:coproporphyrinogen III oxidase; IMG:oxygen-independent coproporphyrinogen-3 oxidase
Source: GenBank
Position: DSS3:4536..5693 (- strand)
Length: 1158
Dbxref: GI:56694934
  GeneID:3196529
Note: identified by match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00539
  NCBI:coproporphyrinogen III oxidase
  IMG:oxygen-independent coproporphyrinogen-3 oxidase
codon_start: 1
load_id: SPO0006.p01
parent_id: SPO0006.t01
product: oxygen-independent coproporphyrinogen III oxidase, putative
protein_id: REF_tigr:SPO0006
  YP_165279.1
transl_table: 11
translation: MADDWQHGGFGLYVHWPFCQAKCPYCDFNSHVAREIDQKAWVRAYVSELERCAAELPGRV LNTIFFGGGTPSLMMPETVAAVIETVRRLWPTSNDMEITLEANPGSVEAGRFAAYRDGGV NRISMGVQALNDRDLHRLGRIHSVAEARAAFDIARRCFERVSFDLIYARQDQTPEAWRAE LNEALAMAVDHLSLYQLTIEDGTAFGDRYARGKLRGLPADDDAADMYLITQEVCATHGLP AYEVSNHARPGSESRHNLIYWRYGDYVGIGPGAHGRITVDGQRFATESPLNPGAWLGAVA KGSGELSRVALSLQDQADEYLMMGLRIAEGLDIHRYEALSPQPLNRNRLAHLTELGMIEI EGTRLKATAQGRAVLNAVILDLMSE
>SPO0006 class=Sequence position=DSS3:4536..5693 (- strand)
TTGGCGGATG ACTGGCAGCA TGGGGGCTTT GGCCTCTACG TGCATTGGCC CTTTTGCCAG GCCAAGTGTC CCTATTGCGA
CTTCAACAGC CATGTTGCCC GTGAAATCGA CCAGAAAGCC TGGGTTAGAG CCTATGTTTC CGAACTTGAA CGCTGTGCCG
CTGAGCTGCC GGGCCGGGTT CTGAACACCA TCTTTTTTGG CGGCGGTACC CCGTCGCTGA TGATGCCGGA AACGGTCGCG
GCAGTGATCG AAACCGTCCG CCGTCTCTGG CCCACCTCCA ACGACATGGA AATCACGCTC GAGGCCAATC CCGGCTCGGT
TGAGGCCGGG CGCTTTGCCG CCTATCGCGA TGGCGGGGTC AACCGGATCT CGATGGGGGT GCAGGCGCTG AACGACCGGG
ACCTGCACCG GCTGGGCCGC ATCCACAGCG TGGCCGAGGC GCGGGCAGCT TTCGACATTG CGCGGCGCTG TTTTGAGCGG
GTCAGTTTCG ACCTGATCTA TGCCCGGCAG GACCAGACAC CCGAAGCGTG GCGTGCCGAG TTGAACGAGG CGCTGGCCAT
GGCGGTCGAT CACCTGTCGC TCTACCAGTT GACGATCGAG GACGGCACCG CCTTTGGCGA CCGCTATGCC CGCGGCAAGC
TGCGCGGCCT ACCCGCCGAT GACGACGCCG CCGACATGTA CCTGATCACG CAAGAGGTCT GCGCCACGCA TGGCCTGCCC
GCCTACGAGG TCTCGAACCA CGCCCGCCCC GGTTCGGAAT CGCGCCACAA CCTGATCTAT TGGCGCTATG GCGATTATGT
CGGCATCGGC CCCGGCGCAC ATGGTCGCAT CACCGTGGAT GGCCAGCGTT TCGCCACCGA AAGCCCGCTG AACCCTGGCG
CCTGGCTGGG CGCAGTGGCA AAGGGAAGTG GTGAGTTGAG CCGAGTAGCC CTCTCGCTAC AAGATCAAGC CGACGAATAC
CTGATGATGG GGCTTCGTAT TGCCGAAGGA CTAGATATCC ACCGATACGA GGCGCTTTCG CCGCAGCCCC TAAACCGGAA
CCGCCTTGCC CATTTGACCG AACTGGGCAT GATCGAGATC GAAGGTACGC GGCTGAAGGC CACCGCCCAG GGGCGTGCGG
TGCTGAACGC GGTCATTCTG GACCTGATGT CGGAGTAG

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