Annotation Tools       Downloadable Files
Annotation Tools       Downloadable Files


Alavi, M., T. Miller, K. Erlandson, R. Schneider, and R. Belas. 2001. Bacterial community associated with Pfiesteria-like dinoflagellate cultures. Environ. Microbiol. 3:380-396.

Allgaier, M., H. Uphoff, A. Felske, and I. Wagner-Döbler. 2003. Aerobic anoxygenic photosynthesis in Roseobacter clade bacteria from diverse marine habitats. Appl. Environ. Microbiol. 69:5051-5059.

Biebl, H. and I. Wagner-Döbler. 2006. Growth and bacteriochlorophyll a formation in taxonomically diverse aerobic anoxygenic phototrophic bacteria in chemostat culture: Influence of light regimen and starvation. Process Biochemistry 41(10):2153-2159.

Biebl, H., M. Allgaier, B. Tindall, M. Koblizek, H. Lünsdorf, R. Pukall and I. Wagner-Döbler. 2005. Dinoroseobacter shibae, gen. nov., sp. nov., a new aerobic phototrophic bacterium isolated from dinoflagellates. Int. J. System. Evol. Microbiol. 55: 1089 - 1096.

Boettcher, K. J., B. J. Barber, and J. T. Singer. 2000. Additional evidence that juvenile oyster disease is caused by a member of the Roseobacter group and colonization of nonaffected animals by Stappia stellulata-like strains. Appl. Environ. Microbiol. 66:3924-3930.

Brinkhoff T, Giebel HA, Simon M. 2008. Diversity, ecology, and genomics of the Roseobacter clade: a short overview. Arch Microbiol 189: 531-539.

Brinkhoff, T., G. Bach, T. Heidorn, L. F. Liang, A. Schlingloff, and M. Simon. 2004. Antibiotic production by a Roseobacter clade-affiliated species from the German Wadden Sea and its antagonistic effects on indigenous isolates. Appl. Environ. Microbiol. 70:2560-2565.

Buchan, A., J. M. González, and M. A. Moran. 2005. An overview of the marine Roseobacter lineage. Appl. Environ. Microbiol. 71: 5665-5677.

Buchan, A., E. L. Neidle, and M. A. Moran. 2004. Diverse organization of genes of the β-ketoadipate pathway in members of the marine Roseobacter lineage. Appl. Environ. Microbiol. 70: 1658-1668.

Büergmann H, Howard EC, Ye W, Sun F, Sun S, et al. 2007. Transcriptional response of Silicibacter pomeroyi DSS-3 to dimethylsulfoniopropionate (DMSP). Environ. Microbiol. 9(11):2742-55.

Chan, L.-K., R. J. Newton, S. Sharma, C. B. Smith, P. Rayapati, A. J. Limardo, C. Meile, and M. A. Moran. 2012. Transcriptional changes underlying elemental stoichiometry shifts in a marine heterotrophic bacterium. Frontiers in Aquatic Microbiology 3:159.

Curson ARJ, Sullivan MJ, Todd JD, Johnston AWB. 2011. DddY, a periplasmic dimethylsulfoniopropionate lyase found in taxonomically diverse species of Proteobacteria. ISME J. 1-10.

Curson ARJ, Rogers R, Todd JD, Brearley CA, Johnston AWB. 2008. Molecular genetic analysis of a dimethylsulfoniopropionate lyase that liberates the climate-changing gas dimethylsulfide in several marine α-proteobacteria and Rhodobacter sphaeroides. Environ. Microbiol. 10(3):75-67.

Gram, L., H. P. Grossart, A. Schlingloff, and T. Kiørboe. 2002. Possible quorum sensing in marine snow bacteria: production of acylated homoserine lactones by Roseobacter strains isolated from marine snow. Appl. Environ. Microbiol. 68:4111-4116.

Howard EC, Henriksen JR, Buchan A, Reisch CR, Bürgmann H, Welsh R, et al. 2006. Bacterial taxa that limit sulfur flux from the ocean. Science. 314:649-52.

Luo, H., A. Löytynoja, and M. A. Moran. 2012. Genome content of uncultivated marine roseobacters in the surface ocean. Environmental Microbiology 14:41-51.

Miller, T. R., and R. Belas. 2004. Dimethylsulfoniopropionate metabolism by Pfiesteria-associated Roseobacter spp. Appl. Environ. Microbiol. 70:3383-3391.

Moran, M. A., C. R. Reisch, R. P. Kiene, and W. B. Whitman. 2012. Genomic insights into bacterial DMSP transformations. Annual Reviews in Marine Sciences 4:523–42.

Moran MA, Belas R, Schell MA, González JM, Sun F, Sun S, et al. 2007. Ecological genomics of marine roseobacters. Appl Environ Microbiol 73: 4559-4569.

Moran, M. A., A. Buchan, J. M. González, J. F. Heidelberg, W. B. Whitman, R. P. Kiene, et al. 2004. Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment. Nature 432:910-913.

Moran, M. A., J. M. González, and R. P. Kiene. 2003. Linking a bacterial taxon to sulfur cycling in the sea: studies of the marine Roseobacter group. Geomicrobiology Journal 20:375-388.

Newton RJ, Griffin LE, Bowles KM, Meile C, Gifford S, Givens CE, et al. 2010. Genome characteristics of a generalist marine bacterial lineage. ISME J. 4:784-98.

Oz, A., G. Sabehi, M. Koblizek, R. Massana, and O. Béjà. 2005. Roseobacter-like bacteria in Red and Mediterranean Sea aerobic anoxygenic photosynthetic populations. Appl. Environ. Microbiol. 71:344-353.

Pradella, S., M. Allgaier, C. Hoch, O. Paüker, E. Stackebrandt, and I. Wagner-Döbler. 2004. Genome organization and localization of the pufLM genes of the photosynthesis reaction center in phylogenetically diverse marine alphaproteobacteria. Appl. Environ. Microbiol. 70:3360-3369.

Reisch, C. R., M. J. Stoudemayer, V. A. Varaljay, and I. J. Amster, M. A. Moran, and W. B. Whitman. 2011. Novel pathway for assimilation of dimethylsulphoniopropionate widespread in marine bacteria. Nature 473: 208–211.

Reisch, C. R., M. A. Moran, and W. B. Whitman. 2011. Bacterial catabolism of dimethylsulfoniopropionate (DMSP). Frontiers in Microbial Physiology and Metabolism 2:172.

Reisch, C. R., M. A. Moran, and W. B. Whitman. 2008. Dimethylsulfoniopropionate-dependent demethylase (DmdA) from Pelagibacter ubique and Silicibacter pomeroyi. J. Bacteriol. 190:8018-24.

Rinta-Kanto JM, Bürgmann H, Gifford SM, Sun S, Sharma S, et al. 2010. Analysis of sulfur-related transcription by Roseobacter communities using a taxon-specific functional gene microarray. Environ. Microbiol. 13(2):453-67.

Selje, N., M. Simon, and T. Brinkhoff. 2004. A newly discovered Roseobacter cluster in temperate and polar oceans. Nature 427:445-448.

Swingley, W. D., et al. 2007. The complete genome sequence of Roseobacter denitrificans reveals a mixotrophic rather than photosynthetic metabolism. J. Bacteriol. 189:683-690.

Todd JD, Kirkwood M, Newton-Payne S, Johnston AW. 2012. DddW, a third DMSP lyase in a model Roseobacter marine bacterium, Ruegeria pomeroyi DSS-3. ISME J. 6:223–226.

Todd JD, Curson AR, Nikolaidou-Katsaraidou N, Brearley CA, Watmough NJ, et al. 2010. Molecular dissection of bacterial acrylate catabolism – unexpected links with dimethylsulfoniopropionate catabolism and dimethyl sulfide production. Environ. Microbiol. 12(2):327–343.

Todd JD, Curson ARJ, Kirkwood M, Sullivan MJ, Green RT, Johnston AWB. 2010. DddQ, a novel, cupin-containing, dimethylsulfoniopropionate lyase in marine roseobacters and in uncultured marine bacteria. Environ. Microbiol. 13(2):427–438.

Todd JD, Curson ARJ, Dupont CL, Nicholson P, Johnston AWB. 2009. The dddP gene, encoding a novel enzyme that converts dimethylsulfoniopropionate into dimethyl sulfide, is widespread in ocean metagenomes and marine bacteria and also occurs in some Ascomycete fungi. Environ. Microbiol. 11(6):1624-25.

Todd JD, Rogers R, Li YG, Wexler M, Bond PL, Sun L, et al. 2007. Structural and regulatory genes required to make the gas dimethyl sulfide in bacteria. Science. 315(5812):666-69.

Wagner-Döbler I, Ballhausen B, Berger M, Brinkhoff T, Buchholz I, et al. 2009. The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchiker’s guide to life in the sea. ISME J Advance online publication doi: 10.1038/ismej.2009.94.

Wagner-Döbler I, Biebl H. 2006. Environmental biology of the marine Roseobacter lineage. Annu Rev Microbiol 60: 255-280.

Wagner-Döbler, I., V. Thiel, L. Eberl, M. Allgaier, A. Bodor, S. Meyer, S. Ebner, A. Hennig, R. Pukall and S. Schulz. 2005. Discovery of complex mixtures of novel longchain quorum sensing signals in free-living and host-associated marine Alphaproteobacteria. ChemBioChem 6(12):2195-206.

Zhao YL, Wang K, Budinoff C, Buchan A, Lang A, Jiao NZ, Chen F. 2009. Gene transfer agent (GTA) genes reveal diverse and dynamic Roseobacter and Rhodobacter populations in the Chesapeake Bay. ISME J 3: 364-373.


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